
PubMed:28517045
Annnotations
pqqtest_sentence
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
M_0 | 1441-1459 | cand:TO:0000283-biological process trait | denotes | important insights |
M_1 | 1441-1459 | cand:PECO:0007125-genetic environment | denotes | important insights |
M_2 | 1441-1459 | cand:funRiceGene:227-plant development | denotes | important insights |
M_3 | 1441-1459 | cand:PO:0025269-collective organ part structure | denotes | important insights |
M_4 | 1441-1459 | cand:PO:0007525-establishment of tissue systems stage | denotes | important insights |
M_5 | 1441-1459 | cand:PO:0025578-collective phyllome structure development stage | denotes | important insights |
M_6 | 1441-1459 | cand:TO:0002746-fruit weight | denotes | important insights |
M_7 | 1441-1459 | cand:funRiceGene:337-plant height | denotes | important insights |
M_8 | 1441-1459 | cand:TO:0000501-spikelet weight | denotes | important insights |
M_9 | 1441-1459 | cand:TO:0000387-plant trait | denotes | important insights |
M_10 | 1441-1459 | cand:WTO:0000047-plant density | denotes | important insights |
M_11 | 843-859 | cand:funRiceGene:171-histone trimethylation | denotes | H3K4 methylation |
M_12 | 843-859 | cand:funRiceGene:313-6mA demethylation | denotes | H3K4 methylation |
M_13 | 843-859 | cand:funRiceGene:333-transcription suppressor | denotes | H3K4 methylation |
M_14 | 843-859 | cand:funRiceGene:336-homeobox gene | denotes | H3K4 methylation |
M_15 | 843-859 | cand:TO:0000002-epigenetic trait | denotes | H3K4 methylation |
M_16 | 843-859 | cand:funRiceGene:32-transcription regulator | denotes | H3K4 methylation |
M_17 | 843-859 | cand:funRiceGene:42-demethylation | denotes | H3K4 methylation |
M_18 | 843-859 | cand:WTO:0000036-late maturation | denotes | H3K4 methylation |
M_19 | 843-859 | cand:TO:0002661-seed maturation | denotes | H3K4 methylation |
M_20 | 843-859 | cand:funRiceGene:203-domestication | denotes | H3K4 methylation |
M_21 | 0-19 | cand:WTO:0000393-Endria inimica | denotes | SET DOMAIN GROUP701 |
M_22 | 0-19 | cand:PO:0025312-megasporangium exothecium | denotes | SET DOMAIN GROUP701 |
M_23 | 0-19 | cand:funRiceGene:117-HIGHER YIELD RICE | denotes | SET DOMAIN GROUP701 |
M_24 | 0-19 | cand:PO:0025311-microsporangium exothecium | denotes | SET DOMAIN GROUP701 |
M_25 | 0-19 | cand:PECO:0007263-Maliarpha separatella exposure | denotes | SET DOMAIN GROUP701 |
M_26 | 0-19 | cand:PECO:0007260-Diopsis macrophthalma exposure | denotes | SET DOMAIN GROUP701 |
M_27 | 0-19 | cand:PO:0006334-seed micropyle | denotes | SET DOMAIN GROUP701 |
M_28 | 0-19 | cand:funRiceGene:280-seed growth | denotes | SET DOMAIN GROUP701 |
M_29 | 0-19 | cand:funRiceGene:440-seedling growth | denotes | SET DOMAIN GROUP701 |
M_30 | 0-19 | cand:PO:0002000-stomatal complex | denotes | SET DOMAIN GROUP701 |
M_31 | 0-19 | cand:funRiceGene:213-grain growth | denotes | SET DOMAIN GROUP701 |
M_32 | 1036-1057 | cand:TO:0020008-sorghum grain mold | denotes | rice grain production |
M_33 | 1036-1057 | cand:TO:0000666-brown rice yield | denotes | rice grain production |
M_34 | 1036-1057 | cand:TO:0000144-milled rice yield | denotes | rice grain production |
M_35 | 1036-1057 | cand:TO:0000449-grain yield per plant | denotes | rice grain production |
M_36 | 1036-1057 | cand:funRiceGene:315-grain yield | denotes | rice grain production |
M_37 | 1036-1057 | cand:TO:0002658-starch grain synthesis | denotes | rice grain production |
M_38 | 1036-1057 | cand:funRiceGene:504-biomass production | denotes | rice grain production |
M_39 | 1036-1057 | cand:funRiceGene:109-phytoalexin production | denotes | rice grain production |
M_40 | 1036-1057 | cand:PO:0008007-nucellar projection | denotes | rice grain production |
M_41 | 1036-1057 | cand:funRiceGene:172-bioethanol production | denotes | rice grain production |
M_42 | 1036-1057 | cand:WTO:0000049-reproduction | denotes | rice grain production |
M_43 | 1550-1565 | cand:PO:0007016-whole plant flowering stage | denotes | plant flowering |
M_44 | 1550-1565 | cand:PPO:0001000-herbaceous plant | denotes | plant flowering |
M_45 | 1550-1565 | cand:PPO:0001001-woody plant | denotes | plant flowering |
M_46 | 1550-1565 | cand:PO:0020003-plant ovule | denotes | plant flowering |
M_47 | 1550-1565 | cand:PO:0025538-plant sap | denotes | plant flowering |
M_48 | 1550-1565 | cand:PECO:0007007-monocot weed plant neighbor | denotes | plant flowering |
M_49 | 1550-1565 | cand:TO:0000359-female flowering | denotes | plant flowering |
M_50 | 1550-1565 | cand:PO:0025603-plant resin | denotes | plant flowering |
M_51 | 1550-1565 | cand:TO:0000365-male flowering | denotes | plant flowering |
M_52 | 1550-1565 | cand:WTO:0000016-early flowering | denotes | plant flowering |
M_53 | 1550-1565 | cand:WTO:0000033-late flowering | denotes | plant flowering |
M_54 | 785-791 | GeneID:RAPID:Os08g0180100MSUID:LOC_Os08g08210 | denotes | SDG701 |
M_55 | 11-19 | GeneID:NA | denotes | GROUP701 |
M_56 | 914-920 | GeneID:RAPID:Os08g0180100MSUID:LOC_Os08g08210 | denotes | SDG701 |
M_57 | 1374-1380 | GeneID:RAPID:Os08g0180100MSUID:LOC_Os08g08210 | denotes | SDG701 |
T4833 | 97-114 | funRiceGene:374, xzyao:18955 | denotes | plant development |
T53454 | 955-972 | funRiceGene:374, xzyao:18955 | denotes | plant development |
T16055 | 196-211 | xzyao:22593 | denotes | gene regulation |
T99696 | 1086-1095 | funRiceGene:504 | denotes | flowering |
T91052 | 1136-1145 | funRiceGene:504 | denotes | flowering |
T4593 | 1556-1565 | funRiceGene:504 | denotes | flowering |
T53818 | 103-114 | WTO:0000011, funRiceGene:359 | denotes | development |
T25803 | 751-762 | WTO:0000011, funRiceGene:359 | denotes | development |
T47441 | 961-972 | WTO:0000011, funRiceGene:359 | denotes | development |
T99389 | 403-429 | xzyao:25579 | denotes | transcriptional activation |
T60171 | 1080-1100 | xzyao:42695 | denotes | plant flowering time |
T52087 | 1080-1095 | xzyao:11534 | denotes | plant flowering |
T27991 | 1550-1565 | xzyao:11534 | denotes | plant flowering |
T81177 | 1041-1046 | funRiceGene:91 | denotes | grain |
T32912 | 1499-1523 | xzyao:24127 | denotes | transcription activation |
T2942 | 1131-1145 | xzyao:13885 | denotes | rice flowering |
T47236 | 657-665 | xzyao:38844 | denotes | the gene |
T73745 | 1086-1100 | funRiceGene:89, xzyao:5715 | denotes | flowering time |
T85002 | 1036-1046 | xzyao:26806 | denotes | rice grain |
T35553 | 740-746 | WTO:0000021, funRiceGene:221 | denotes | growth |
T30076 | 248-265 | xzyao:35612 | denotes | natural variation |
T97014 | 1036-1057 | xzyao:38678 | denotes | rice grain production |
T30854 | 734-746 | funRiceGene:44, xzyao:29681 | denotes | plant growth |
T37330 | 293-303 | xzyao:24584 | denotes | Histone H3 |
T8173 | 1411-1428 | funRiceGene:439 | denotes | methyltransferase |
T37852 | 1041-1057 | xzyao:18920 | denotes | grain production |
T11327 | 92-114 | xzyao:10802 | denotes | rice plant development |
T85892 | 92-102 | xzyao:28048 | denotes | rice plant |
T26545 | 1322-1326 | hunflair:NA:Gene | denotes | RFT1 |
T62090 | 1313-1317 | hunflair:NA:Gene | denotes | Hd3a |
T12167 | 573-593 | hunflair:NA:Gene | denotes | SET DOMAIN GROUP 701 |
T79268 | 304-310 | hunflair:NA:Chemical | denotes | lysine |
T65392 | 293-303 | hunflair:NA:Gene | denotes | Histone H3 |
T94255 | 1397-1428 | hunflair:NA:Gene | denotes | H3K4-specific methyltransferase |
T85401 | 11-19 | hunflair:NA:Gene | denotes | GROUP701 |
T88269 | 30-51 | hunflair:NA:Gene | denotes | H3K4-methytransferase |
T49738 | 35-51 | hunflair:NA:Gene | denotes | methytransferase |
T97299 | 802-818 | hunflair:NA:Gene | denotes | methytransferase |
T65700 | 92-96 | hunflair:NA:Species | denotes | rice |
T42143 | 568-572 | hunflair:NA:Species | denotes | rice |
T61932 | 1036-1040 | hunflair:NA:Species | denotes | rice |
T2366 | 1131-1135 | hunflair:NA:Species | denotes | rice |
T25075 | 1308-1312 | hunflair:NA:Species | denotes | rice |
T2648 | 1392-1396 | hunflair:NA:Species | denotes | rice |
T21924 | 595-601 | hunflair:NA:Gene | denotes | SDG701 |
T94254 | 785-791 | hunflair:NA:Gene | denotes | SDG701 |
T94961 | 914-920 | hunflair:NA:Gene | denotes | SDG701 |
T54043 | 1115-1121 | hunflair:NA:Gene | denotes | SDG701 |
T21012 | 1213-1219 | hunflair:NA:Gene | denotes | SDG701 |
T55494 | 1374-1380 | hunflair:NA:Gene | denotes | SDG701 |
T34136 | 1267-1274 | pubtator:MESH:C024755:Chemical | denotes | H3K4me3 |
T60857 | 1477-1484 | pubtator:MESH:C024755:Chemical | denotes | H3K4me3 |
T89098 | 304-310 | pubtator:MESH:C114808:Chemical | denotes | lysine |
T55552 | 92-96 | pubtator:4530:Species | denotes | rice |
T70224 | 568-572 | pubtator:4530:Species | denotes | rice |
T95825 | 1036-1040 | pubtator:4530:Species | denotes | rice |
T23200 | 1131-1135 | pubtator:4530:Species | denotes | rice |
T86131 | 1308-1312 | pubtator:4530:Species | denotes | rice |
M_58 | 1392-1396 | pubtator:4530:Species | denotes | rice |
M_59 | 332-339 | pubtator:MESH:C024755:Chemical | denotes | H3K4me2 |
M_60 | 471-478 | pubtator:MESH:C024755:Chemical | denotes | H3K4me2 |
21k_plant_trait_mention
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
M_0 | 955-972 | funRiceGene:374, xzyao:5921 | denotes | plant development |
M_1 | 1086-1100 | funRiceGene:89, xzyao:17041 | denotes | flowering time |
M_2 | 740-746 | WTO:0000021, funRiceGene:221 | denotes | growth |
M_3 | 734-746 | funRiceGene:44, xzyao:2989 | denotes | plant growth |
M_4 | 1041-1046 | funRiceGene:91 | denotes | grain |
M_5 | 961-972 | WTO:0000011, funRiceGene:359 | denotes | development |
M_6 | 1411-1428 | funRiceGene:439 | denotes | methyltransferase |
M_7 | 1086-1095 | funRiceGene:504 | denotes | flowering |
M_8 | 1136-1145 | funRiceGene:504 | denotes | flowering |
M_9 | 1322-1326 | hunflair:NA:Gene | denotes | RFT1 |
M_10 | 30-51 | hunflair:NA:Gene | denotes | H3K4-methytransferase |
M_11 | 304-310 | hunflair:NA:Chemical | denotes | lysine |
M_12 | 1397-1428 | hunflair:NA:Gene | denotes | H3K4-specific methyltransferase |
M_13 | 92-96 | hunflair:NA:Species | denotes | rice |
M_14 | 568-572 | hunflair:NA:Species | denotes | rice |
M_15 | 1036-1040 | hunflair:NA:Species | denotes | rice |
M_16 | 1131-1135 | hunflair:NA:Species | denotes | rice |
M_17 | 1308-1312 | hunflair:NA:Species | denotes | rice |
M_18 | 1392-1396 | hunflair:NA:Species | denotes | rice |
M_19 | 35-51 | hunflair:NA:Gene | denotes | methytransferase |
M_20 | 802-818 | hunflair:NA:Gene | denotes | methytransferase |
M_21 | 293-303 | hunflair:NA:Gene | denotes | Histone H3 |
M_22 | 11-19 | hunflair:NA:Gene | denotes | GROUP701 |
M_23 | 573-593 | hunflair:NA:Gene | denotes | SET DOMAIN GROUP 701 |
M_24 | 595-601 | hunflair:NA:Gene | denotes | SDG701 |
M_25 | 785-791 | hunflair:NA:Gene | denotes | SDG701 |
M_26 | 914-920 | hunflair:NA:Gene | denotes | SDG701 |
M_27 | 1115-1121 | hunflair:NA:Gene | denotes | SDG701 |
M_28 | 1213-1219 | hunflair:NA:Gene | denotes | SDG701 |
M_29 | 1374-1380 | hunflair:NA:Gene | denotes | SDG701 |
M_30 | 1313-1317 | hunflair:NA:Gene | denotes | Hd3a |
M_31 | 332-339 | pubtator:MESH:C024755:Chemical | denotes | H3K4me2 |
M_32 | 471-478 | pubtator:MESH:C024755:Chemical | denotes | H3K4me2 |
M_33 | 1267-1274 | pubtator:MESH:C024755:Chemical | denotes | H3K4me3 |
M_34 | 1477-1484 | pubtator:MESH:C024755:Chemical | denotes | H3K4me3 |
M_35 | 92-96 | pubtator:4530:Species | denotes | rice |
M_36 | 568-572 | pubtator:4530:Species | denotes | rice |
M_37 | 1036-1040 | pubtator:4530:Species | denotes | rice |
M_38 | 1131-1135 | pubtator:4530:Species | denotes | rice |
M_39 | 1308-1312 | pubtator:4530:Species | denotes | rice |
M_40 | 1392-1396 | pubtator:4530:Species | denotes | rice |
M_41 | 304-310 | pubtator:MESH:C114808:Chemical | denotes | lysine |
OryzaGP_2021_v2
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 301-303 | http://identifiers.org/oryzabase.gene/2976 | denotes | H3 |
T2 | 301-303 | http://identifiers.org/oryzabase.gene/15776 | denotes | H3 |
T3 | 301-303 | http://identifiers.org/oryzabase.gene/15720 | denotes | H3 |
T4 | 595-601 | http://identifiers.org/oryzabase.gene/13391 | denotes | SDG701 |
T5 | 785-791 | http://identifiers.org/oryzabase.gene/13391 | denotes | SDG701 |
T6 | 914-920 | http://identifiers.org/oryzabase.gene/13391 | denotes | SDG701 |
T7 | 1115-1121 | http://identifiers.org/oryzabase.gene/13391 | denotes | SDG701 |
T8 | 1213-1219 | http://identifiers.org/oryzabase.gene/13391 | denotes | SDG701 |
T9 | 1313-1317 | http://identifiers.org/oryzabase.gene/7216 | denotes | Hd3a |
T10 | 1322-1326 | http://identifiers.org/oryzabase.gene/9620 | denotes | RFT1 |
T11 | 1374-1380 | http://identifiers.org/oryzabase.gene/13391 | denotes | SDG701 |
T93890 | 301-303 | http://identifiers.org/rapdb.locus/Os06g0160001 | denotes | H3 |
T48606 | 301-303 | http://identifiers.org/rapdb.locus/Os03g0727200 | denotes | H3 |
T91636 | 595-601 | http://identifiers.org/rapdb.locus/Os08g0180100 | denotes | SDG701 |
T27229 | 785-791 | http://identifiers.org/rapdb.locus/Os08g0180100 | denotes | SDG701 |
T15423 | 914-920 | http://identifiers.org/rapdb.locus/Os08g0180100 | denotes | SDG701 |
T22395 | 1115-1121 | http://identifiers.org/rapdb.locus/Os08g0180100 | denotes | SDG701 |
T6099 | 1213-1219 | http://identifiers.org/rapdb.locus/Os08g0180100 | denotes | SDG701 |
T53896 | 1313-1317 | http://identifiers.org/rapdb.locus/Os06g0157700 | denotes | Hd3a |
T94121 | 1322-1326 | http://identifiers.org/rapdb.locus/Os06g0157500 | denotes | RFT1 |
T95695 | 1374-1380 | http://identifiers.org/rapdb.locus/Os08g0180100 | denotes | SDG701 |
OryzaGP_2022
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 293-303 | http://identifiers.org/oryzabase.gene/17953 | denotes | Histone H3 |
T2 | 293-303 | http://identifiers.org/oryzabase.gene/17631 | denotes | Histone H3 |
T3 | 293-303 | http://identifiers.org/oryzabase.gene/15761 | denotes | Histone H3 |
T4 | 293-303 | http://identifiers.org/oryzabase.gene/15720 | denotes | Histone H3 |
OryzaGP_2021_FLAIR
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
M_0 | 304-310 | hunflair:NA:Chemical | denotes | lysine |
M_1 | 595-601 | hunflair:NA:Gene | denotes | SDG701 |
M_2 | 785-791 | hunflair:NA:Gene | denotes | SDG701 |
M_3 | 914-920 | hunflair:NA:Gene | denotes | SDG701 |
M_4 | 1115-1121 | hunflair:NA:Gene | denotes | SDG701 |
M_5 | 1213-1219 | hunflair:NA:Gene | denotes | SDG701 |
M_6 | 1374-1380 | hunflair:NA:Gene | denotes | SDG701 |
M_7 | 1313-1317 | hunflair:NA:Gene | denotes | Hd3a |
M_8 | 11-19 | hunflair:NA:Gene | denotes | GROUP701 |
M_9 | 30-51 | hunflair:NA:Gene | denotes | H3K4-methytransferase |
M_10 | 35-51 | hunflair:NA:Gene | denotes | methytransferase |
M_11 | 802-818 | hunflair:NA:Gene | denotes | methytransferase |
M_12 | 92-96 | hunflair:NA:Species | denotes | rice |
M_13 | 568-572 | hunflair:NA:Species | denotes | rice |
M_14 | 1036-1040 | hunflair:NA:Species | denotes | rice |
M_15 | 1131-1135 | hunflair:NA:Species | denotes | rice |
M_16 | 1308-1312 | hunflair:NA:Species | denotes | rice |
M_17 | 1392-1396 | hunflair:NA:Species | denotes | rice |
M_18 | 1322-1326 | hunflair:NA:Gene | denotes | RFT1 |
M_19 | 573-593 | hunflair:NA:Gene | denotes | SET DOMAIN GROUP 701 |
M_20 | 1397-1428 | hunflair:NA:Gene | denotes | H3K4-specific methyltransferase |
M_21 | 293-303 | hunflair:NA:Gene | denotes | Histone H3 |
OryzaGP_2021
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 0-19 | http://identifiers.org/oryzabase.gene/13391 | denotes | SET DOMAIN GROUP701 |
T2 | 293-303 | http://identifiers.org/oryzabase.gene/17631 | denotes | Histone H3 |
T3 | 293-303 | http://identifiers.org/oryzabase.gene/15720 | denotes | Histone H3 |
T4 | 573-593 | http://identifiers.org/oryzabase.gene/13391 | denotes | SET DOMAIN GROUP 701 |
T5 | 595-601 | http://identifiers.org/oryzabase.gene/13391 | denotes | SDG701 |
T6 | 785-791 | http://identifiers.org/oryzabase.gene/13391 | denotes | SDG701 |
T7 | 914-920 | http://identifiers.org/oryzabase.gene/13391 | denotes | SDG701 |
T8 | 1115-1121 | http://identifiers.org/oryzabase.gene/13391 | denotes | SDG701 |
T9 | 1213-1219 | http://identifiers.org/oryzabase.gene/13391 | denotes | SDG701 |
T10 | 1313-1317 | http://identifiers.org/oryzabase.gene/7216 | denotes | Hd3a |
T11 | 1322-1326 | http://identifiers.org/oryzabase.gene/9620 | denotes | RFT1 |
T12 | 1374-1380 | http://identifiers.org/oryzabase.gene/13391 | denotes | SDG701 |
T43526 | 0-19 | http://identifiers.org/ricegap/LOC_Os08g08210 | denotes | SET DOMAIN GROUP701 |
T9259 | 293-303 | http://identifiers.org/ricegap/LOC_Os06g04030 | denotes | Histone H3 |
T72744 | 573-593 | http://identifiers.org/ricegap/LOC_Os08g08210 | denotes | SET DOMAIN GROUP 701 |
T10861 | 595-601 | http://identifiers.org/ricegap/LOC_Os08g08210 | denotes | SDG701 |
T16627 | 785-791 | http://identifiers.org/ricegap/LOC_Os08g08210 | denotes | SDG701 |
T11011 | 914-920 | http://identifiers.org/ricegap/LOC_Os08g08210 | denotes | SDG701 |
T83759 | 1115-1121 | http://identifiers.org/ricegap/LOC_Os08g08210 | denotes | SDG701 |
T37508 | 1213-1219 | http://identifiers.org/ricegap/LOC_Os08g08210 | denotes | SDG701 |
T73220 | 1313-1317 | http://identifiers.org/ricegap/LOC_Os06g06320 | denotes | Hd3a |
T94125 | 1322-1326 | http://identifiers.org/ricegap/LOC_Os06g06300 | denotes | RFT1 |
T81623 | 1374-1380 | http://identifiers.org/ricegap/LOC_Os08g08210 | denotes | SDG701 |
T67970 | 0-19 | http://identifiers.org/rapdb.locus/Os08g0180100 | denotes | SET DOMAIN GROUP701 |
T19303 | 293-303 | http://identifiers.org/rapdb.locus/Os06g0130900 | denotes | Histone H3 |
T68443 | 573-593 | http://identifiers.org/rapdb.locus/Os08g0180100 | denotes | SET DOMAIN GROUP 701 |
T62742 | 595-601 | http://identifiers.org/rapdb.locus/Os08g0180100 | denotes | SDG701 |
T14682 | 785-791 | http://identifiers.org/rapdb.locus/Os08g0180100 | denotes | SDG701 |
T83165 | 914-920 | http://identifiers.org/rapdb.locus/Os08g0180100 | denotes | SDG701 |
T85133 | 1115-1121 | http://identifiers.org/rapdb.locus/Os08g0180100 | denotes | SDG701 |
T65554 | 1213-1219 | http://identifiers.org/rapdb.locus/Os08g0180100 | denotes | SDG701 |
T8776 | 1313-1317 | http://identifiers.org/rapdb.locus/Os06g0157700 | denotes | Hd3a |
T74285 | 1322-1326 | http://identifiers.org/rapdb.locus/Os06g0157500 | denotes | RFT1 |
T6921 | 1374-1380 | http://identifiers.org/rapdb.locus/Os08g0180100 | denotes | SDG701 |
T73807 | 0-19 | http://identifiers.org/refseq/XP_002870257.1 | denotes | SET DOMAIN GROUP701 |
T28858 | 293-303 | http://identifiers.org/uniprot/D7SZ96 | denotes | Histone H3 |
T67864 | 573-593 | http://identifiers.org/refseq/XP_002870257.1 | denotes | SET DOMAIN GROUP 701 |
T69018 | 595-601 | http://identifiers.org/refseq/XP_002870257.1 | denotes | SDG701 |
T52990 | 785-791 | http://identifiers.org/refseq/XP_002870257.1 | denotes | SDG701 |
T37335 | 914-920 | http://identifiers.org/refseq/XP_002870257.1 | denotes | SDG701 |
T25619 | 1115-1121 | http://identifiers.org/refseq/XP_002870257.1 | denotes | SDG701 |
T66360 | 1213-1219 | http://identifiers.org/refseq/XP_002870257.1 | denotes | SDG701 |
T56657 | 1313-1317 | http://identifiers.org/uniprot/Q93WM7 | denotes | Hd3a |
T59717 | 1313-1317 | http://identifiers.org/uniprot/Q93WI9 | denotes | Hd3a |
T22075 | 1322-1326 | http://identifiers.org/uniprot/Q8VWH2 | denotes | RFT1 |
T54154 | 1374-1380 | http://identifiers.org/refseq/XP_002870257.1 | denotes | SDG701 |
M_0 | 304-310 | hunflair:NA:Chemical | denotes | lysine |
M_1 | 595-601 | hunflair:NA:Gene | denotes | SDG701 |
M_2 | 785-791 | hunflair:NA:Gene | denotes | SDG701 |
M_3 | 914-920 | hunflair:NA:Gene | denotes | SDG701 |
M_4 | 1115-1121 | hunflair:NA:Gene | denotes | SDG701 |
M_5 | 1213-1219 | hunflair:NA:Gene | denotes | SDG701 |
M_6 | 1374-1380 | hunflair:NA:Gene | denotes | SDG701 |
M_7 | 1313-1317 | hunflair:NA:Gene | denotes | Hd3a |
M_8 | 11-19 | hunflair:NA:Gene | denotes | GROUP701 |
M_9 | 30-51 | hunflair:NA:Gene | denotes | H3K4-methytransferase |
M_10 | 35-51 | hunflair:NA:Gene | denotes | methytransferase |
M_11 | 802-818 | hunflair:NA:Gene | denotes | methytransferase |
M_12 | 92-96 | hunflair:NA:Species | denotes | rice |
M_13 | 568-572 | hunflair:NA:Species | denotes | rice |
M_14 | 1036-1040 | hunflair:NA:Species | denotes | rice |
M_15 | 1131-1135 | hunflair:NA:Species | denotes | rice |
M_16 | 1308-1312 | hunflair:NA:Species | denotes | rice |
M_17 | 1392-1396 | hunflair:NA:Species | denotes | rice |
M_18 | 1322-1326 | hunflair:NA:Gene | denotes | RFT1 |
M_19 | 573-593 | hunflair:NA:Gene | denotes | SET DOMAIN GROUP 701 |
M_20 | 1397-1428 | hunflair:NA:Gene | denotes | H3K4-specific methyltransferase |
M_21 | 293-303 | hunflair:NA:Gene | denotes | Histone H3 |
funRiceGenes-all
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
PTO-all_T1 | 1086-1100 | http://purl.obolibrary.org/obo/TO_0002616 | denotes | flowering time |
OryzaGP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 301-303 | gene | denotes | H3 |
T2 | 785-791 | gene | denotes | SDG701 |
T3 | 914-920 | gene | denotes | SDG701 |
T4 | 1213-1219 | gene | denotes | SDG701 |
T5 | 1313-1317 | gene | denotes | Hd3a |
T6 | 1322-1326 | gene | denotes | RFT1 |
T7 | 1374-1380 | gene | denotes | SDG701 |
Oryza_sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 0-115 | Sentence | denotes | SET DOMAIN GROUP701 encodes a H3K4-methytransferase and regulates multiple key processes of rice plant development. |
T2 | 116-292 | Sentence | denotes | Chromatin-based epigenetic information plays an important role in developmental gene regulation, in response to environment, and in natural variation of gene expression levels. |
T3 | 293-430 | Sentence | denotes | Histone H3 lysine 4 di/trimethylation (H3K4me2/3) is abundant in euchromatin and is generally associated with transcriptional activation. |
T4 | 431-525 | Sentence | denotes | Strikingly, however, enzymes catalyzing H3K4me2/3 remain poorly characterized in crops so far. |
T5 | 526-763 | Sentence | denotes | Here, we investigated the function of the rice SET DOMAIN GROUP 701 (SDG701) gene by molecular and biochemical characterization of the gene product, and by studying effects of its loss or gain of function on plant growth and development. |
T6 | 764-860 | Sentence | denotes | We demonstrated that SDG701 encodes a methytransferase specifically catalyzing H3K4 methylation. |
T7 | 861-1058 | Sentence | denotes | Overexpression and knockdown experiments showed that SDG701 is crucial for proper sporophytic plant development as well as for gametophytic transmission that directly impacts rice grain production. |
T8 | 1059-1194 | Sentence | denotes | In-depth analysis of plant flowering time revealed that SDG701 promotes rice flowering under either long-day or short-day photoperiods. |
T9 | 1195-1337 | Sentence | denotes | Consistently, the SDG701 protein was found to bind chromatin to promote H3K4me3 and to enhance expression of the rice Hd3a and RFT1 florigens. |
T10 | 1338-1566 | Sentence | denotes | Collectively, our results establish SDG701 as a major rice H3K4-specific methyltransferase and provide important insights into function of H3K4me3 deposition in transcription activation of florigens in promoting plant flowering. |