PubMed:28468941 / 1378-1706 JSONTXT

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LitCoin-sentences

Id Subject Object Predicate Lexical cue
T11 0-328 Sentence denotes These results demonstrate the critical role of the final 20 amino acids of caveolin-1 in modulating fibroblast proliferation by dampening Smad signaling and suggest that augmented Smad signaling and fibroblast hyperproliferation are contributing factors in the pathogenesis of PAH in patients with caveolin-1 c.474delA mutation.

LitCoin-entities

Id Subject Object Predicate Lexical cue db_id
12833 75-85 GeneOrGeneProduct denotes caveolin-1 NCBIGene:857
12834 138-142 GeneOrGeneProduct denotes Smad NCBIGene:4086|NCBIGene:4090|NCBIGene:4093
12835 180-184 GeneOrGeneProduct denotes Smad NCBIGene:4086|NCBIGene:4090|NCBIGene:4093
12836 277-280 DiseaseOrPhenotypicFeature denotes PAH MESH:D000081029
12837 284-292 OrganismTaxon denotes patients NCBITaxon:9606
12838 298-308 GeneOrGeneProduct denotes caveolin-1 NCBIGene:857
12839 309-318 SequenceVariant denotes c.474delA DBSNP:rs587777017

LitCoin-SeqVar

Id Subject Object Predicate Lexical cue
T5 309-318 SequenceVariant denotes c.474delA

LitCoin-GeneOrGeneProduct-v0

Id Subject Object Predicate Lexical cue
T40 60-71 GeneOrGeneProduct denotes amino acids
T41 75-85 GeneOrGeneProduct denotes caveolin-1
T42 128-137 GeneOrGeneProduct denotes dampening
T43 138-142 GeneOrGeneProduct denotes Smad
T44 180-184 GeneOrGeneProduct denotes Smad
T45 246-253 GeneOrGeneProduct denotes factors
T46 298-308 GeneOrGeneProduct denotes caveolin-1
T47 319-327 GeneOrGeneProduct denotes mutation

LitCoin-GeneOrGeneProduct-v2

Id Subject Object Predicate Lexical cue
T23 60-71 GeneOrGeneProduct denotes amino acids
T24 75-85 GeneOrGeneProduct denotes caveolin-1
T25 138-142 GeneOrGeneProduct denotes Smad
T26 180-184 GeneOrGeneProduct denotes Smad
T27 298-308 GeneOrGeneProduct denotes caveolin-1

LitCoin-Disease-MeSH

Id Subject Object Predicate Lexical cue originalLabel
T4 277-280 DiseaseOrPhenotypicFeature denotes PAH D000081029

LitCoin-GeneOrGeneProduct-v3

Id Subject Object Predicate Lexical cue
T14 75-85 GeneOrGeneProduct denotes caveolin-1
T15 138-142 GeneOrGeneProduct denotes Smad
T16 180-184 GeneOrGeneProduct denotes Smad
T17 298-308 GeneOrGeneProduct denotes caveolin-1

LitCoin_Mondo_095

Id Subject Object Predicate Lexical cue mondo_id
T5 277-280 DiseaseOrPhenotypicFeature denotes PAH 0015924|0024533

LitCoin-MeSH-Disease-2

Id Subject Object Predicate Lexical cue ID:
T4 277-280 DiseaseOrPhenotypicFeature denotes PAH D000081029

LitCoin-MONDO_bioort2019

Id Subject Object Predicate Lexical cue #label
T4 277-280 DiseaseOrPhenotypicFeature denotes PAH D000081029

LitCoin-Chemical-MeSH-CHEBI

Id Subject Object Predicate Lexical cue ID:
T7 277-280 ChemicalEntity denotes PAH http://purl.obolibrary.org/obo/CHEBI_53305|http://purl.obolibrary.org/obo/CHEBI_33848|http://purl.obolibrary.org/obo/CHEBI_31204|http://purl.obolibrary.org/obo/CHEBI_104011

LitCoin-NCBITaxon-2

Id Subject Object Predicate Lexical cue
T4 284-292 OrganismTaxon denotes patients

LitCoin-training-merged

Id Subject Object Predicate Lexical cue #label ID:
T7 277-280 ChemicalEntity denotes PAH http://purl.obolibrary.org/obo/CHEBI_104011|http://purl.obolibrary.org/obo/CHEBI_31204|http://purl.obolibrary.org/obo/CHEBI_33848|http://purl.obolibrary.org/obo/CHEBI_53305
T17 298-308 GeneOrGeneProduct denotes caveolin-1
T16 180-184 GeneOrGeneProduct denotes Smad
T15 138-142 GeneOrGeneProduct denotes Smad
T14 75-85 GeneOrGeneProduct denotes caveolin-1
T70693 277-280 DiseaseOrPhenotypicFeature denotes PAH D000081029
T92895 284-292 OrganismTaxon denotes patients
T22226 309-318 SequenceVariant denotes c.474delA