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GoldHamster

Id Subject Object Predicate Lexical cue
T1 26-32 UBERON:0000117 denotes airway
T2 26-32 UBERON:0001005 denotes airway
T3 61-75 D055090 denotes tracheomalacia
T4 61-75 D055090 denotes tracheomalacia
T5 89-103 D055090 denotes Tracheomalacia
T6 89-103 D055090 denotes Tracheomalacia
T7 298-311 UBERON:0001135 denotes smooth muscle
T8 298-311 UBERON:0000953 denotes smooth muscle
T11 329-335 UBERON:0000117 denotes airway
T12 329-335 UBERON:0001005 denotes airway
T14 458-467 MOP:0000569 denotes reduction
T15 484-491 UBERON:0000914 denotes segment
T16 528-534 UBERON:0000117 denotes airway
T17 528-534 UBERON:0001005 denotes airway
T18 667-674 UBERON:0000062 denotes element
T19 667-674 CHEBI:33250 denotes element
T20 732-739 UBERON:0000914 denotes segment
T21 771-780 MOP:0000569 denotes reduction
T22 784-790 UBERON:0000479 denotes tissue
T23 853-859 UBERON:0000117 denotes airway
T24 853-859 UBERON:0001005 denotes airway
T25 870-879 UBERON:0002418 denotes Cartilage
T26 870-879 UBERON:0007844 denotes Cartilage
T27 889-895 UBERON:0000479 denotes tissue
T28 901-914 UBERON:0001135 denotes smooth muscle
T29 901-914 UBERON:0000953 denotes smooth muscle
T32 949-952 PR:P0A707 denotes fit
T33 949-952 PR:000023014 denotes fit
T34 987-992 9940 denotes lambs
T35 1186-1192 UBERON:0000117 denotes airway
T36 1186-1192 UBERON:0001005 denotes airway
T37 1214-1221 UBERON:0001005 denotes airways
T38 1239-1246 UBERON:0000914 denotes segment
T39 1250-1259 UBERON:0002418 denotes cartilage
T40 1250-1259 UBERON:0007844 denotes cartilage
T41 1272-1278 UBERON:0000479 denotes tissue
T42 1305-1314 MOP:0000569 denotes reduction
T43 1398-1405 UBERON:0000914 denotes segment
T44 1455-1464 UBERON:0002418 denotes cartilage
T45 1455-1464 UBERON:0007844 denotes cartilage
T46 1473-1479 UBERON:0000479 denotes tissue
T47 1541-1547 UBERON:0000117 denotes airway
T48 1541-1547 UBERON:0001005 denotes airway
T49 1562-1566 PR:P60880 denotes snap
T50 1562-1566 PR:P54921 denotes snap
T51 1562-1566 PR:P60881 denotes snap
T52 1562-1566 PR:Q6PC54 denotes snap
T53 1562-1566 PR:000015312 denotes snap
T55 1562-1566 PR:Q23983 denotes snap
T56 1562-1566 PR:P60878 denotes snap
T57 1562-1566 PR:Q5TZ66 denotes snap
T59 1562-1566 PR:P60879 denotes snap
T54 1562-1566 CHEBI:77702 denotes snap
T58 1562-1566 GO:0005483 denotes snap
T60 1625-1629 PR:P60880 denotes snap
T61 1625-1629 PR:P54921 denotes snap
T62 1625-1629 PR:P60881 denotes snap
T63 1625-1629 PR:Q6PC54 denotes snap
T64 1625-1629 PR:000015312 denotes snap
T66 1625-1629 PR:Q23983 denotes snap
T67 1625-1629 PR:P60878 denotes snap
T68 1625-1629 PR:Q5TZ66 denotes snap
T70 1625-1629 PR:P60879 denotes snap
T65 1625-1629 CHEBI:77702 denotes snap
T69 1625-1629 GO:0005483 denotes snap
T71 1688-1702 D055090 denotes tracheomalacia
T72 1688-1702 D055090 denotes tracheomalacia
T73 1721-1730 UBERON:0002418 denotes cartilage
T74 1721-1730 UBERON:0007844 denotes cartilage
T76 1796-1802 UBERON:0000479 denotes tissue
T77 1853-1860 UBERON:0001005 denotes airways
T78 1873-1879 UBERON:0000344 denotes mucosa
T79 1913-1920 UBERON:0001005 denotes airways
T80 1948-1957 UBERON:0001353 denotes posterior
T81 1958-1980 UBERON:0003387 denotes tracheal smooth muscle
T86 1995-2001 UBERON:0000344 denotes mucosa

PubMed_Structured_Abstracts

Id Subject Object Predicate Lexical cue
T1 89-626 BACKGROUND denotes Tracheomalacia (TM) is a condition of excessive tracheal collapse during exhalation. Both acquired and congenital forms of TM are believed to result from morphological changes in cartilaginous, fibrous and/or smooth muscle tissues reducing airway mechanical properties to a degree that precipitates collapse. However, neither the specific amount of mechanical property reduction nor the malacic segment lengths leading to life threatening airway collapse in TM are known. Furthermore, the specific mechanism of collapse is still debated.
T2 636-1095 METHODS denotes Computational nonlinear finite element models were developed to determine the effect of malacic segment length, tracheal diameter, and reduction in tissue nonlinear elastic properties on the risk for and mechanism of airway collapse. Cartilage, fibrous tissue, and smooth muscle nonlinear elastic properties were fit to experimental data from preterm lambs from the literature. These elastic properties were systematically reduced in the model to simulate TM.
T3 1105-1587 RESULTS denotes An intriguing finding was that sudden mechanical instability leading to complete airway collapse occurred in airways when even a 1 cm segment of cartilage and fibrous tissue properties had a critical reduction in material properties. In general, increased tracheal diameter, increased malacic segment length coupled with decreased nonlinear anterior cartilage/fibrous tissue nonlinear mechanical properties increased the risk of sudden airway collapse from snap through instability.
T4 1600-2107 CONCLUSION denotes Modeling results support snap through instability as the mechanism for life threatening tracheomalacia specifically when cartilage ring nonlinear properties are reduced to a range between fibrous tissue nonlinear elastic properties (for larger diameter airways > 10 mm) to mucosa properties (for smaller diameter airways < 6 mm). Although reducing posterior tracheal smooth muscle properties to mucosa properties decreased exhalation area, no sudden instability leading to collapse was seen in these models.

Goldhamster2_Cellosaurus

Id Subject Object Predicate Lexical cue
T1 105-107 CVCL_3726|Transformed_cell_line|Mus musculus denotes TM
T2 105-107 CVCL_8001|Cancer_cell_line|Homo sapiens denotes TM
T3 105-107 CVCL_E853|Transformed_cell_line|Homo sapiens denotes TM
T4 112-113 CVCL_6479|Finite_cell_line|Mus musculus denotes a
T5 212-214 CVCL_3726|Transformed_cell_line|Mus musculus denotes TM
T6 212-214 CVCL_8001|Cancer_cell_line|Homo sapiens denotes TM
T7 212-214 CVCL_E853|Transformed_cell_line|Homo sapiens denotes TM
T8 257-264 CVCL_0238|Cancer_cell_line|Homo sapiens denotes changes
T9 361-362 CVCL_6479|Finite_cell_line|Mus musculus denotes a
T10 547-549 CVCL_3726|Transformed_cell_line|Mus musculus denotes TM
T11 547-549 CVCL_8001|Cancer_cell_line|Homo sapiens denotes TM
T12 547-549 CVCL_E853|Transformed_cell_line|Homo sapiens denotes TM
T13 1092-1094 CVCL_3726|Transformed_cell_line|Mus musculus denotes TM
T14 1092-1094 CVCL_8001|Cancer_cell_line|Homo sapiens denotes TM
T15 1092-1094 CVCL_E853|Transformed_cell_line|Homo sapiens denotes TM
T16 1105-1107 CVCL_8754|Cancer_cell_line|Homo sapiens denotes An
T17 1105-1107 CVCL_H241|Cancer_cell_line|Homo sapiens denotes An
T18 1232-1235 CVCL_6G43|Cancer_cell_line|Homo sapiens denotes a 1
T19 1232-1235 CVCL_RG52|Induced_pluripotent_stem_cell|Homo sapiens denotes a 1
T20 1232-1235 CVCL_VA32|Cancer_cell_line|Homo sapiens denotes a 1
T21 1232-1233 CVCL_6479|Finite_cell_line|Mus musculus denotes a
T22 1236-1238 CVCL_H246|Cancer_cell_line|Homo sapiens denotes cm
T23 1294-1295 CVCL_6479|Finite_cell_line|Mus musculus denotes a
T24 1772-1773 CVCL_6479|Finite_cell_line|Mus musculus denotes a