PubMed:28346429
Annnotations
LitCoin-entities
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| 12488 | 38-53 | GeneOrGeneProduct | denotes | liver kinase B1 | NCBIGene:20869 |
| 12489 | 81-86 | DiseaseOrPhenotypicFeature | denotes | tumor | MESH:D009369 |
| 12490 | 98-132 | GeneOrGeneProduct | denotes | vascular endothelial growth factor | NCBIGene:22339 |
| 12491 | 134-149 | GeneOrGeneProduct | denotes | Liver kinase B1 | NCBIGene:20869 |
| 12492 | 151-155 | GeneOrGeneProduct | denotes | LKB1 | NCBIGene:20869 |
| 12493 | 162-193 | GeneOrGeneProduct | denotes | serine/threonine protein kinase | NCBIGene:20869 |
| 12494 | 264-286 | DiseaseOrPhenotypicFeature | denotes | Peutz-Jeghers syndrome | MESH:D010580 |
| 12495 | 292-297 | DiseaseOrPhenotypicFeature | denotes | tumor | MESH:D009369 |
| 12496 | 335-339 | GeneOrGeneProduct | denotes | LKB1 | NCBIGene:20869 |
| 12497 | 367-372 | DiseaseOrPhenotypicFeature | denotes | tumor | MESH:D009369 |
| 12498 | 446-450 | GeneOrGeneProduct | denotes | LKB1 | NCBIGene:20869 |
| 12499 | 461-465 | GeneOrGeneProduct | denotes | LKB1 | NCBIGene:20869 |
| 12500 | 476-480 | OrganismTaxon | denotes | mice | NCBITaxon:10090 |
| 12501 | 498-527 | GeneOrGeneProduct | denotes | vascular endothelial-cadherin | NCBIGene:12562 |
| 12502 | 532-536 | OrganismTaxon | denotes | mice | NCBITaxon:10090 |
| 12503 | 542-546 | GeneOrGeneProduct | denotes | LKB1 | NCBIGene:20869 |
| 12504 | 558-562 | OrganismTaxon | denotes | mice | NCBITaxon:10090 |
| 12505 | 564-598 | GeneOrGeneProduct | denotes | Vascular endothelial growth factor | NCBIGene:22339 |
| 12506 | 600-604 | GeneOrGeneProduct | denotes | VEGF | NCBIGene:22339 |
| 12507 | 681-685 | GeneOrGeneProduct | denotes | LKB1 | NCBIGene:20869 |
| 12508 | 695-699 | OrganismTaxon | denotes | mice | NCBITaxon:10090 |
| 12509 | 715-719 | GeneOrGeneProduct | denotes | LKB1 | NCBIGene:20869 |
| 12510 | 729-734 | OrganismTaxon | denotes | mouse | NCBITaxon:10090 |
| 12511 | 826-832 | DiseaseOrPhenotypicFeature | denotes | Tumors | MESH:D009369 |
| 12512 | 846-850 | GeneOrGeneProduct | denotes | LKB1 | NCBIGene:20869 |
| 12513 | 860-864 | OrganismTaxon | denotes | mice | NCBITaxon:10090 |
| 12514 | 893-897 | GeneOrGeneProduct | denotes | LKB1 | NCBIGene:20869 |
| 12515 | 907-911 | OrganismTaxon | denotes | mice | NCBITaxon:10090 |
| 12516 | 1039-1043 | OrganismTaxon | denotes | mice | NCBITaxon:10090 |
| 12517 | 1058-1062 | GeneOrGeneProduct | denotes | VEGF | NCBIGene:22339 |
| 12518 | 1174-1179 | DiseaseOrPhenotypicFeature | denotes | tumor | MESH:D009369 |
| 12519 | 1209-1213 | GeneOrGeneProduct | denotes | LKB1 | NCBIGene:20869 |
| 12520 | 1232-1237 | OrganismTaxon | denotes | mouse | NCBITaxon:10090 |
| 12521 | 1286-1290 | GeneOrGeneProduct | denotes | VEGF | NCBIGene:22339 |
| 12522 | 1389-1393 | GeneOrGeneProduct | denotes | LKB1 | NCBIGene:20869 |
| 12523 | 1410-1425 | GeneOrGeneProduct | denotes | VEGF receptor 2 | NCBIGene:16542 |
| 12524 | 1485-1489 | GeneOrGeneProduct | denotes | LKB1 | NCBIGene:20869 |
| 12525 | 1523-1527 | GeneOrGeneProduct | denotes | LKB1 | NCBIGene:20869 |
| 12526 | 1546-1550 | GeneOrGeneProduct | denotes | VEGF | NCBIGene:22339 |
| 12527 | 1573-1594 | GeneOrGeneProduct | denotes | specificity protein 1 | NCBIGene:20683 |
| 12528 | 1596-1599 | GeneOrGeneProduct | denotes | Sp1 | NCBIGene:20683 |
| 12529 | 1638-1641 | GeneOrGeneProduct | denotes | Sp1 | NCBIGene:20683 |
| 12530 | 1649-1653 | GeneOrGeneProduct | denotes | VEGF | NCBIGene:22339 |
| 12531 | 1673-1677 | GeneOrGeneProduct | denotes | VEGF | NCBIGene:22339 |
| 12532 | 1702-1706 | GeneOrGeneProduct | denotes | LKB1 | NCBIGene:20869 |
| 12533 | 1749-1754 | DiseaseOrPhenotypicFeature | denotes | tumor | MESH:D009369 |
| 12534 | 1776-1779 | GeneOrGeneProduct | denotes | Sp1 | NCBIGene:20683 |
| 12535 | 1789-1793 | GeneOrGeneProduct | denotes | VEGF | NCBIGene:22339 |
LitCoin-entities-OrganismTaxon-PD
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T1 | 476-480 | OrganismTaxon | denotes | mice | NCBItxid:10095|NCBItxid:10088 |
| T3 | 532-536 | OrganismTaxon | denotes | mice | NCBItxid:10095|NCBItxid:10088 |
| T5 | 558-562 | OrganismTaxon | denotes | mice | NCBItxid:10095|NCBItxid:10088 |
| T7 | 695-699 | OrganismTaxon | denotes | mice | NCBItxid:10095|NCBItxid:10088 |
| T9 | 729-734 | OrganismTaxon | denotes | mouse | NCBItxid:10090|NCBItxid:10088 |
| T11 | 860-864 | OrganismTaxon | denotes | mice | NCBItxid:10095|NCBItxid:10088 |
| T13 | 907-911 | OrganismTaxon | denotes | mice | NCBItxid:10095|NCBItxid:10088 |
| T15 | 1039-1043 | OrganismTaxon | denotes | mice | NCBItxid:10095|NCBItxid:10088 |
| T17 | 1232-1237 | OrganismTaxon | denotes | mouse | NCBItxid:10090|NCBItxid:10088 |
LitCoin-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-133 | Sentence | denotes | Deletion of endothelial cell-specific liver kinase B1 increases angiogenesis and tumor growth via vascular endothelial growth factor. |
| T2 | 134-236 | Sentence | denotes | Liver kinase B1 (LKB1) is a serine/threonine protein kinase ubiquitously expressed in mammalian cells. |
| T3 | 237-314 | Sentence | denotes | It was first identified in Peutz-Jeghers syndrome as a tumor suppressor gene. |
| T4 | 315-391 | Sentence | denotes | Whether endothelial LKB1 regulates angiogenesis and tumor growth is unknown. |
| T5 | 392-563 | Sentence | denotes | In this study, we generated endothelial cell-specific LKB1-knockout (LKB1(endo-/-)) mice by crossbreeding vascular endothelial-cadherin-Cre mice with LKB1(flox/flox) mice. |
| T6 | 564-700 | Sentence | denotes | Vascular endothelial growth factor (VEGF) level was highly co-stained in endothelial cells but not in macrophages in LKB1(endo-/-) mice. |
| T7 | 701-825 | Sentence | denotes | Consistently, LKB1(endo-/-) mouse tissues including the lung, skin, kidney and liver showed increased vascular permeability. |
| T8 | 826-1044 | Sentence | denotes | Tumors implanted in LKB1(endo-/-) mice but not macrophage-specific LKB1-knockout mice grew faster and showed enhanced vascular permeability and increased angiogenesis as compared with those implanted in wild-type mice. |
| T9 | 1045-1195 | Sentence | denotes | Injection of VEGF-neutralizing antibody but not the isotype-matched control antibody decreased endothelial-cell angiogenesis and tumor growth in vivo. |
| T10 | 1196-1371 | Sentence | denotes | Furthermore, LKB1 deletion enhanced mouse retinal and cell angiogenesis, and knockdown of VEGF by small-interfering RNA decreased endothelial cell proliferation and migration. |
| T11 | 1372-1505 | Sentence | denotes | Re-expression of LKB1 or knockdown of VEGF receptor 2 decreased the overproliferation and -migration observed in LKB1(endo-/-) cells. |
| T12 | 1506-1689 | Sentence | denotes | Mechanistically, LKB1 could bind to the VEGF transcription factor, specificity protein 1 (Sp1), which then inhibited the binding of Sp1 to the VEGF promoter to reduce VEGF expression. |
| T13 | 1690-1805 | Sentence | denotes | Endothelial LKB1 may regulate endothelial angiogenesis and tumor growth by modulating Sp1-mediated VEGF expression. |
LitCoin_Mondo
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T1 | 12-23 | DiseaseOrPhenotypicFeature | denotes | endothelial | 0015292 |
| T2 | 107-118 | DiseaseOrPhenotypicFeature | denotes | endothelial | 0015292 |
| T3 | 264-286 | DiseaseOrPhenotypicFeature | denotes | Peutz-Jeghers syndrome | 0008280 |
| T4 | 323-334 | DiseaseOrPhenotypicFeature | denotes | endothelial | 0015292 |
| T5 | 420-431 | DiseaseOrPhenotypicFeature | denotes | endothelial | 0015292 |
| T6 | 507-518 | DiseaseOrPhenotypicFeature | denotes | endothelial | 0015292 |
| T7 | 573-584 | DiseaseOrPhenotypicFeature | denotes | endothelial | 0015292 |
| T8 | 637-648 | DiseaseOrPhenotypicFeature | denotes | endothelial | 0015292 |
| T9 | 1140-1151 | DiseaseOrPhenotypicFeature | denotes | endothelial | 0015292 |
| T10 | 1238-1245 | DiseaseOrPhenotypicFeature | denotes | retinal | 0002708 |
| T11 | 1326-1337 | DiseaseOrPhenotypicFeature | denotes | endothelial | 0015292 |
| T12 | 1690-1701 | DiseaseOrPhenotypicFeature | denotes | Endothelial | 0015292 |
| T13 | 1720-1731 | DiseaseOrPhenotypicFeature | denotes | endothelial | 0015292 |
LitCoin-GeneOrGeneProduct-v0
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 12-23 | GeneOrGeneProduct | denotes | endothelial |
| T2 | 24-28 | GeneOrGeneProduct | denotes | cell |
| T3 | 38-53 | GeneOrGeneProduct | denotes | liver kinase B1 |
| T4 | 81-86 | GeneOrGeneProduct | denotes | tumor |
| T5 | 87-93 | GeneOrGeneProduct | denotes | growth |
| T6 | 98-132 | GeneOrGeneProduct | denotes | vascular endothelial growth factor |
| T7 | 140-146 | GeneOrGeneProduct | denotes | kinase |
| T8 | 147-149 | GeneOrGeneProduct | denotes | B1 |
| T9 | 151-155 | GeneOrGeneProduct | denotes | LKB1 |
| T10 | 162-193 | GeneOrGeneProduct | denotes | serine/threonine protein kinase |
| T11 | 230-235 | GeneOrGeneProduct | denotes | cells |
| T12 | 278-286 | GeneOrGeneProduct | denotes | syndrome |
| T13 | 292-308 | GeneOrGeneProduct | denotes | tumor suppressor |
| T14 | 323-334 | GeneOrGeneProduct | denotes | endothelial |
| T15 | 335-339 | GeneOrGeneProduct | denotes | LKB1 |
| T16 | 340-349 | GeneOrGeneProduct | denotes | regulates |
| T17 | 367-372 | GeneOrGeneProduct | denotes | tumor |
| T18 | 373-379 | GeneOrGeneProduct | denotes | growth |
| T19 | 383-390 | GeneOrGeneProduct | denotes | unknown |
| T20 | 420-431 | GeneOrGeneProduct | denotes | endothelial |
| T21 | 432-436 | GeneOrGeneProduct | denotes | cell |
| T22 | 446-450 | GeneOrGeneProduct | denotes | LKB1 |
| T23 | 451-459 | GeneOrGeneProduct | denotes | knockout |
| T24 | 461-465 | GeneOrGeneProduct | denotes | LKB1 |
| T25 | 466-470 | GeneOrGeneProduct | denotes | endo |
| T26 | 476-480 | GeneOrGeneProduct | denotes | mice |
| T27 | 507-518 | GeneOrGeneProduct | denotes | endothelial |
| T28 | 519-527 | GeneOrGeneProduct | denotes | cadherin |
| T29 | 532-536 | GeneOrGeneProduct | denotes | mice |
| T30 | 542-546 | GeneOrGeneProduct | denotes | LKB1 |
| T31 | 558-562 | GeneOrGeneProduct | denotes | mice |
| T32 | 573-598 | GeneOrGeneProduct | denotes | endothelial growth factor |
| T33 | 600-604 | GeneOrGeneProduct | denotes | VEGF |
| T34 | 616-622 | GeneOrGeneProduct | denotes | highly |
| T35 | 637-648 | GeneOrGeneProduct | denotes | endothelial |
| T36 | 649-654 | GeneOrGeneProduct | denotes | cells |
| T37 | 681-685 | GeneOrGeneProduct | denotes | LKB1 |
| T38 | 686-690 | GeneOrGeneProduct | denotes | endo |
| T39 | 695-699 | GeneOrGeneProduct | denotes | mice |
| T40 | 715-719 | GeneOrGeneProduct | denotes | LKB1 |
| T41 | 720-724 | GeneOrGeneProduct | denotes | endo |
| T42 | 757-761 | GeneOrGeneProduct | denotes | lung |
| T43 | 763-767 | GeneOrGeneProduct | denotes | skin |
| T44 | 769-775 | GeneOrGeneProduct | denotes | kidney |
| T45 | 780-785 | GeneOrGeneProduct | denotes | liver |
| T46 | 826-832 | GeneOrGeneProduct | denotes | Tumors |
| T47 | 846-850 | GeneOrGeneProduct | denotes | LKB1 |
| T48 | 851-855 | GeneOrGeneProduct | denotes | endo |
| T49 | 860-864 | GeneOrGeneProduct | denotes | mice |
| T50 | 893-897 | GeneOrGeneProduct | denotes | LKB1 |
| T51 | 898-906 | GeneOrGeneProduct | denotes | knockout |
| T52 | 907-911 | GeneOrGeneProduct | denotes | mice |
| T53 | 1039-1043 | GeneOrGeneProduct | denotes | mice |
| T54 | 1058-1062 | GeneOrGeneProduct | denotes | VEGF |
| T55 | 1140-1151 | GeneOrGeneProduct | denotes | endothelial |
| T56 | 1152-1156 | GeneOrGeneProduct | denotes | cell |
| T57 | 1174-1179 | GeneOrGeneProduct | denotes | tumor |
| T58 | 1180-1186 | GeneOrGeneProduct | denotes | growth |
| T59 | 1209-1213 | GeneOrGeneProduct | denotes | LKB1 |
| T60 | 1238-1245 | GeneOrGeneProduct | denotes | retinal |
| T61 | 1250-1254 | GeneOrGeneProduct | denotes | cell |
| T62 | 1273-1282 | GeneOrGeneProduct | denotes | knockdown |
| T63 | 1286-1290 | GeneOrGeneProduct | denotes | VEGF |
| T64 | 1294-1299 | GeneOrGeneProduct | denotes | small |
| T65 | 1326-1337 | GeneOrGeneProduct | denotes | endothelial |
| T66 | 1338-1342 | GeneOrGeneProduct | denotes | cell |
| T67 | 1389-1393 | GeneOrGeneProduct | denotes | LKB1 |
| T68 | 1397-1406 | GeneOrGeneProduct | denotes | knockdown |
| T69 | 1410-1423 | GeneOrGeneProduct | denotes | VEGF receptor |
| T70 | 1485-1489 | GeneOrGeneProduct | denotes | LKB1 |
| T71 | 1490-1494 | GeneOrGeneProduct | denotes | endo |
| T72 | 1499-1504 | GeneOrGeneProduct | denotes | cells |
| T73 | 1523-1527 | GeneOrGeneProduct | denotes | LKB1 |
| T74 | 1534-1538 | GeneOrGeneProduct | denotes | bind |
| T75 | 1546-1550 | GeneOrGeneProduct | denotes | VEGF |
| T76 | 1551-1571 | GeneOrGeneProduct | denotes | transcription factor |
| T77 | 1573-1594 | GeneOrGeneProduct | denotes | specificity protein 1 |
| T78 | 1596-1599 | GeneOrGeneProduct | denotes | Sp1 |
| T79 | 1627-1634 | GeneOrGeneProduct | denotes | binding |
| T80 | 1638-1641 | GeneOrGeneProduct | denotes | Sp1 |
| T81 | 1649-1653 | GeneOrGeneProduct | denotes | VEGF |
| T82 | 1666-1672 | GeneOrGeneProduct | denotes | reduce |
| T83 | 1673-1677 | GeneOrGeneProduct | denotes | VEGF |
| T84 | 1690-1701 | GeneOrGeneProduct | denotes | Endothelial |
| T85 | 1702-1706 | GeneOrGeneProduct | denotes | LKB1 |
| T86 | 1711-1719 | GeneOrGeneProduct | denotes | regulate |
| T87 | 1720-1731 | GeneOrGeneProduct | denotes | endothelial |
| T88 | 1749-1754 | GeneOrGeneProduct | denotes | tumor |
| T89 | 1755-1761 | GeneOrGeneProduct | denotes | growth |
| T90 | 1776-1779 | GeneOrGeneProduct | denotes | Sp1 |
| T91 | 1780-1788 | GeneOrGeneProduct | denotes | mediated |
| T92 | 1789-1793 | GeneOrGeneProduct | denotes | VEGF |
LitCoin-GeneOrGeneProduct-v2
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 12-23 | GeneOrGeneProduct | denotes | endothelial |
| T2 | 24-28 | GeneOrGeneProduct | denotes | cell |
| T3 | 38-53 | GeneOrGeneProduct | denotes | liver kinase B1 |
| T4 | 87-93 | GeneOrGeneProduct | denotes | growth |
| T5 | 98-132 | GeneOrGeneProduct | denotes | vascular endothelial growth factor |
| T6 | 140-146 | GeneOrGeneProduct | denotes | kinase |
| T7 | 151-155 | GeneOrGeneProduct | denotes | LKB1 |
| T8 | 162-193 | GeneOrGeneProduct | denotes | serine/threonine protein kinase |
| T9 | 278-286 | GeneOrGeneProduct | denotes | syndrome |
| T10 | 292-308 | GeneOrGeneProduct | denotes | tumor suppressor |
| T11 | 323-334 | GeneOrGeneProduct | denotes | endothelial |
| T12 | 335-339 | GeneOrGeneProduct | denotes | LKB1 |
| T13 | 373-379 | GeneOrGeneProduct | denotes | growth |
| T14 | 383-390 | GeneOrGeneProduct | denotes | unknown |
| T15 | 420-431 | GeneOrGeneProduct | denotes | endothelial |
| T16 | 432-436 | GeneOrGeneProduct | denotes | cell |
| T17 | 446-450 | GeneOrGeneProduct | denotes | LKB1 |
| T18 | 451-459 | GeneOrGeneProduct | denotes | knockout |
| T19 | 461-465 | GeneOrGeneProduct | denotes | LKB1 |
| T20 | 466-470 | GeneOrGeneProduct | denotes | endo |
| T21 | 507-518 | GeneOrGeneProduct | denotes | endothelial |
| T22 | 519-527 | GeneOrGeneProduct | denotes | cadherin |
| T23 | 542-546 | GeneOrGeneProduct | denotes | LKB1 |
| T24 | 573-598 | GeneOrGeneProduct | denotes | endothelial growth factor |
| T25 | 600-604 | GeneOrGeneProduct | denotes | VEGF |
| T26 | 637-648 | GeneOrGeneProduct | denotes | endothelial |
| T27 | 681-685 | GeneOrGeneProduct | denotes | LKB1 |
| T28 | 686-690 | GeneOrGeneProduct | denotes | endo |
| T29 | 715-719 | GeneOrGeneProduct | denotes | LKB1 |
| T30 | 720-724 | GeneOrGeneProduct | denotes | endo |
| T31 | 769-775 | GeneOrGeneProduct | denotes | kidney |
| T32 | 780-785 | GeneOrGeneProduct | denotes | liver |
| T33 | 846-850 | GeneOrGeneProduct | denotes | LKB1 |
| T34 | 851-855 | GeneOrGeneProduct | denotes | endo |
| T35 | 893-897 | GeneOrGeneProduct | denotes | LKB1 |
| T36 | 898-906 | GeneOrGeneProduct | denotes | knockout |
| T37 | 1058-1062 | GeneOrGeneProduct | denotes | VEGF |
| T38 | 1140-1151 | GeneOrGeneProduct | denotes | endothelial |
| T39 | 1152-1156 | GeneOrGeneProduct | denotes | cell |
| T40 | 1180-1186 | GeneOrGeneProduct | denotes | growth |
| T41 | 1209-1213 | GeneOrGeneProduct | denotes | LKB1 |
| T42 | 1250-1254 | GeneOrGeneProduct | denotes | cell |
| T43 | 1273-1282 | GeneOrGeneProduct | denotes | knockdown |
| T44 | 1286-1290 | GeneOrGeneProduct | denotes | VEGF |
| T45 | 1294-1299 | GeneOrGeneProduct | denotes | small |
| T46 | 1326-1337 | GeneOrGeneProduct | denotes | endothelial |
| T47 | 1338-1342 | GeneOrGeneProduct | denotes | cell |
| T48 | 1389-1393 | GeneOrGeneProduct | denotes | LKB1 |
| T49 | 1397-1406 | GeneOrGeneProduct | denotes | knockdown |
| T50 | 1410-1423 | GeneOrGeneProduct | denotes | VEGF receptor |
| T51 | 1485-1489 | GeneOrGeneProduct | denotes | LKB1 |
| T52 | 1490-1494 | GeneOrGeneProduct | denotes | endo |
| T53 | 1523-1527 | GeneOrGeneProduct | denotes | LKB1 |
| T54 | 1546-1550 | GeneOrGeneProduct | denotes | VEGF |
| T55 | 1551-1571 | GeneOrGeneProduct | denotes | transcription factor |
| T56 | 1573-1594 | GeneOrGeneProduct | denotes | specificity protein 1 |
| T57 | 1627-1634 | GeneOrGeneProduct | denotes | binding |
| T58 | 1649-1653 | GeneOrGeneProduct | denotes | VEGF |
| T59 | 1673-1677 | GeneOrGeneProduct | denotes | VEGF |
| T60 | 1690-1701 | GeneOrGeneProduct | denotes | Endothelial |
| T61 | 1702-1706 | GeneOrGeneProduct | denotes | LKB1 |
| T62 | 1720-1731 | GeneOrGeneProduct | denotes | endothelial |
| T63 | 1755-1761 | GeneOrGeneProduct | denotes | growth |
| T64 | 1789-1793 | GeneOrGeneProduct | denotes | VEGF |
LitCoin-Disease-MeSH
| Id | Subject | Object | Predicate | Lexical cue | originalLabel |
|---|---|---|---|---|---|
| T1 | 81-86 | DiseaseOrPhenotypicFeature | denotes | tumor | D009369 |
| T2 | 264-286 | DiseaseOrPhenotypicFeature | denotes | Peutz-Jeghers syndrome | D010580 |
| T3 | 292-297 | DiseaseOrPhenotypicFeature | denotes | tumor | D009369 |
| T4 | 367-372 | DiseaseOrPhenotypicFeature | denotes | tumor | D009369 |
| T5 | 826-832 | DiseaseOrPhenotypicFeature | denotes | Tumors | D009369 |
| T6 | 1174-1179 | DiseaseOrPhenotypicFeature | denotes | tumor | D009369 |
| T7 | 1749-1754 | DiseaseOrPhenotypicFeature | denotes | tumor | D009369 |
LitCoin-GeneOrGeneProduct-v3
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 38-53 | GeneOrGeneProduct | denotes | liver kinase B1 |
| T2 | 98-132 | GeneOrGeneProduct | denotes | vascular endothelial growth factor |
| T3 | 134-149 | GeneOrGeneProduct | denotes | Liver kinase B1 |
| T4 | 151-155 | GeneOrGeneProduct | denotes | LKB1 |
| T5 | 162-193 | GeneOrGeneProduct | denotes | serine/threonine protein kinase |
| T6 | 298-308 | GeneOrGeneProduct | denotes | suppressor |
| T7 | 335-339 | GeneOrGeneProduct | denotes | LKB1 |
| T8 | 446-450 | GeneOrGeneProduct | denotes | LKB1 |
| T9 | 461-465 | GeneOrGeneProduct | denotes | LKB1 |
| T10 | 519-527 | GeneOrGeneProduct | denotes | cadherin |
| T11 | 542-546 | GeneOrGeneProduct | denotes | LKB1 |
| T12 | 573-598 | GeneOrGeneProduct | denotes | endothelial growth factor |
| T13 | 600-604 | GeneOrGeneProduct | denotes | VEGF |
| T14 | 681-685 | GeneOrGeneProduct | denotes | LKB1 |
| T15 | 715-719 | GeneOrGeneProduct | denotes | LKB1 |
| T16 | 846-850 | GeneOrGeneProduct | denotes | LKB1 |
| T17 | 893-897 | GeneOrGeneProduct | denotes | LKB1 |
| T18 | 1058-1062 | GeneOrGeneProduct | denotes | VEGF |
| T19 | 1209-1213 | GeneOrGeneProduct | denotes | LKB1 |
| T20 | 1286-1290 | GeneOrGeneProduct | denotes | VEGF |
| T21 | 1389-1393 | GeneOrGeneProduct | denotes | LKB1 |
| T22 | 1410-1423 | GeneOrGeneProduct | denotes | VEGF receptor |
| T24 | 1485-1489 | GeneOrGeneProduct | denotes | LKB1 |
| T25 | 1523-1527 | GeneOrGeneProduct | denotes | LKB1 |
| T26 | 1546-1550 | GeneOrGeneProduct | denotes | VEGF |
| T27 | 1551-1571 | GeneOrGeneProduct | denotes | transcription factor |
| T28 | 1573-1594 | GeneOrGeneProduct | denotes | specificity protein 1 |
| T29 | 1596-1599 | GeneOrGeneProduct | denotes | Sp1 |
| T30 | 1638-1641 | GeneOrGeneProduct | denotes | Sp1 |
| T31 | 1649-1653 | GeneOrGeneProduct | denotes | VEGF |
| T32 | 1673-1677 | GeneOrGeneProduct | denotes | VEGF |
| T33 | 1702-1706 | GeneOrGeneProduct | denotes | LKB1 |
| T34 | 1776-1779 | GeneOrGeneProduct | denotes | Sp1 |
| T35 | 1789-1793 | GeneOrGeneProduct | denotes | VEGF |
LitCoin_Mondo_095
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T1 | 81-86 | DiseaseOrPhenotypicFeature | denotes | tumor | 0005070 |
| T2 | 264-286 | DiseaseOrPhenotypicFeature | denotes | Peutz-Jeghers syndrome | 0008280 |
| T3 | 292-297 | DiseaseOrPhenotypicFeature | denotes | tumor | 0005070 |
| T4 | 367-372 | DiseaseOrPhenotypicFeature | denotes | tumor | 0005070 |
| T5 | 757-761 | DiseaseOrPhenotypicFeature | denotes | lung | 0021117 |
| T6 | 763-767 | DiseaseOrPhenotypicFeature | denotes | skin | 0002531 |
| T7 | 1174-1179 | DiseaseOrPhenotypicFeature | denotes | tumor | 0005070 |
| T8 | 1749-1754 | DiseaseOrPhenotypicFeature | denotes | tumor | 0005070 |
LitCoin-MeSH-Disease-2
| Id | Subject | Object | Predicate | Lexical cue | ID: |
|---|---|---|---|---|---|
| T1 | 81-86 | DiseaseOrPhenotypicFeature | denotes | tumor | D009369 |
| T2 | 264-286 | DiseaseOrPhenotypicFeature | denotes | Peutz-Jeghers syndrome | D010580 |
| T3 | 292-297 | DiseaseOrPhenotypicFeature | denotes | tumor | D009369 |
| T4 | 367-372 | DiseaseOrPhenotypicFeature | denotes | tumor | D009369 |
| T5 | 826-832 | DiseaseOrPhenotypicFeature | denotes | Tumors | DISEASE|D009369 |
| T7 | 1174-1179 | DiseaseOrPhenotypicFeature | denotes | tumor | D009369 |
| T8 | 1749-1754 | DiseaseOrPhenotypicFeature | denotes | tumor | D009369 |
LitCoin-MONDO_bioort2019
| Id | Subject | Object | Predicate | Lexical cue | #label |
|---|---|---|---|---|---|
| T1 | 81-86 | DiseaseOrPhenotypicFeature | denotes | tumor | D009369 |
| T2 | 264-286 | DiseaseOrPhenotypicFeature | denotes | Peutz-Jeghers syndrome | D010580 |
| T3 | 292-297 | DiseaseOrPhenotypicFeature | denotes | tumor | D009369 |
| T4 | 367-372 | DiseaseOrPhenotypicFeature | denotes | tumor | D009369 |
| T5 | 826-832 | DiseaseOrPhenotypicFeature | denotes | Tumors | D009369 |
| T6 | 1174-1179 | DiseaseOrPhenotypicFeature | denotes | tumor | D009369 |
| T7 | 1749-1754 | DiseaseOrPhenotypicFeature | denotes | tumor | D009369 |
LitCoin-Chemical-MeSH-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | ID: |
|---|---|---|---|---|---|
| T1 | 162-168 | ChemicalEntity | denotes | serine | http://purl.obolibrary.org/obo/CHEBI_17822 |
| T2 | 169-178 | ChemicalEntity | denotes | threonine | http://purl.obolibrary.org/obo/CHEBI_26986 |
| T3 | 498-527 | ChemicalEntity | denotes | vascular endothelial-cadherin | C094954 |
| T4 | 1238-1245 | ChemicalEntity | denotes | retinal | D012172|http://purl.obolibrary.org/obo/CHEBI_15035 |
LitCoin-NCBITaxon-2
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 476-480 | OrganismTaxon | denotes | mice |
| T2 | 532-536 | OrganismTaxon | denotes | mice |
| T3 | 558-562 | OrganismTaxon | denotes | mice |
| T4 | 695-699 | OrganismTaxon | denotes | mice |
| T5 | 729-734 | OrganismTaxon | denotes | mouse |
| T6 | 860-864 | OrganismTaxon | denotes | mice |
| T7 | 907-911 | OrganismTaxon | denotes | mice |
| T8 | 1039-1043 | OrganismTaxon | denotes | mice |
| T9 | 1232-1237 | OrganismTaxon | denotes | mouse |
LitCoin-training-merged
| Id | Subject | Object | Predicate | Lexical cue | #label | ID: |
|---|---|---|---|---|---|---|
| T4 | 1238-1245 | ChemicalEntity | denotes | retinal | http://purl.obolibrary.org/obo/CHEBI_15035|D012172 | |
| T3 | 498-527 | ChemicalEntity | denotes | vascular endothelial-cadherin | C094954 | |
| T2 | 169-178 | ChemicalEntity | denotes | threonine | http://purl.obolibrary.org/obo/CHEBI_26986 | |
| T1 | 162-168 | ChemicalEntity | denotes | serine | http://purl.obolibrary.org/obo/CHEBI_17822 | |
| T35 | 1789-1793 | GeneOrGeneProduct | denotes | VEGF | ||
| T34 | 1776-1779 | GeneOrGeneProduct | denotes | Sp1 | ||
| T33 | 1702-1706 | GeneOrGeneProduct | denotes | LKB1 | ||
| T32 | 1673-1677 | GeneOrGeneProduct | denotes | VEGF | ||
| T31 | 1649-1653 | GeneOrGeneProduct | denotes | VEGF | ||
| T30 | 1638-1641 | GeneOrGeneProduct | denotes | Sp1 | ||
| T29 | 1596-1599 | GeneOrGeneProduct | denotes | Sp1 | ||
| T28 | 1573-1594 | GeneOrGeneProduct | denotes | specificity protein 1 | ||
| T27 | 1551-1571 | GeneOrGeneProduct | denotes | transcription factor | ||
| T26 | 1546-1550 | GeneOrGeneProduct | denotes | VEGF | ||
| T25 | 1523-1527 | GeneOrGeneProduct | denotes | LKB1 | ||
| T24 | 1485-1489 | GeneOrGeneProduct | denotes | LKB1 | ||
| T22 | 1410-1423 | GeneOrGeneProduct | denotes | VEGF receptor | ||
| T21 | 1389-1393 | GeneOrGeneProduct | denotes | LKB1 | ||
| T20 | 1286-1290 | GeneOrGeneProduct | denotes | VEGF | ||
| T19 | 1209-1213 | GeneOrGeneProduct | denotes | LKB1 | ||
| T18 | 1058-1062 | GeneOrGeneProduct | denotes | VEGF | ||
| T17 | 893-897 | GeneOrGeneProduct | denotes | LKB1 | ||
| T16 | 846-850 | GeneOrGeneProduct | denotes | LKB1 | ||
| T15 | 715-719 | GeneOrGeneProduct | denotes | LKB1 | ||
| T14 | 681-685 | GeneOrGeneProduct | denotes | LKB1 | ||
| T13 | 600-604 | GeneOrGeneProduct | denotes | VEGF | ||
| T12 | 573-598 | GeneOrGeneProduct | denotes | endothelial growth factor | ||
| T11 | 542-546 | GeneOrGeneProduct | denotes | LKB1 | ||
| T10 | 519-527 | GeneOrGeneProduct | denotes | cadherin | ||
| T9 | 461-465 | GeneOrGeneProduct | denotes | LKB1 | ||
| T8 | 446-450 | GeneOrGeneProduct | denotes | LKB1 | ||
| T7 | 335-339 | GeneOrGeneProduct | denotes | LKB1 | ||
| T6 | 298-308 | GeneOrGeneProduct | denotes | suppressor | ||
| T5 | 162-193 | GeneOrGeneProduct | denotes | serine/threonine protein kinase | ||
| T6147 | 151-155 | GeneOrGeneProduct | denotes | LKB1 | ||
| T7950 | 134-149 | GeneOrGeneProduct | denotes | Liver kinase B1 | ||
| T79552 | 98-132 | GeneOrGeneProduct | denotes | vascular endothelial growth factor | ||
| T87607 | 38-53 | GeneOrGeneProduct | denotes | liver kinase B1 | ||
| T18916 | 1749-1754 | DiseaseOrPhenotypicFeature | denotes | tumor | D009369 | |
| T63972 | 1174-1179 | DiseaseOrPhenotypicFeature | denotes | tumor | D009369 | |
| T18240 | 826-832 | DiseaseOrPhenotypicFeature | denotes | Tumors | D009369 | |
| T27200 | 367-372 | DiseaseOrPhenotypicFeature | denotes | tumor | D009369 | |
| T39756 | 292-297 | DiseaseOrPhenotypicFeature | denotes | tumor | D009369 | |
| T80714 | 264-286 | DiseaseOrPhenotypicFeature | denotes | Peutz-Jeghers syndrome | D010580 | |
| T28147 | 81-86 | DiseaseOrPhenotypicFeature | denotes | tumor | D009369 | |
| T73244 | 1232-1237 | OrganismTaxon | denotes | mouse | ||
| T3881 | 1039-1043 | OrganismTaxon | denotes | mice | ||
| T25359 | 907-911 | OrganismTaxon | denotes | mice | ||
| T85541 | 860-864 | OrganismTaxon | denotes | mice | ||
| T96453 | 729-734 | OrganismTaxon | denotes | mouse | ||
| T15904 | 695-699 | OrganismTaxon | denotes | mice | ||
| T97041 | 558-562 | OrganismTaxon | denotes | mice | ||
| T10368 | 532-536 | OrganismTaxon | denotes | mice | ||
| T23074 | 476-480 | OrganismTaxon | denotes | mice |