PubMed:28326091
Annnotations
pqqtest_sentence
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| M_0 | 1293-1315 | cand:WTO:0000224-flour mechanical property | denotes | nutritional properties |
| M_1 | 1293-1315 | cand:funRiceGene:220-nutritional quality | denotes | nutritional properties |
| M_2 | 1293-1315 | cand:TO:0000489-carbohydrate composition related trait | denotes | nutritional properties |
| M_3 | 1293-1315 | cand:WTO:0000223-flour composition | denotes | nutritional properties |
| M_4 | 1293-1315 | cand:WTO:0000162-micronutrient use efficiency | denotes | nutritional properties |
| M_5 | 1293-1315 | cand:WTO:0000159-macronutrient use efficiency | denotes | nutritional properties |
| M_6 | 1293-1315 | cand:funRiceGene:481-actin protein | denotes | nutritional properties |
| M_7 | 1293-1315 | cand:PO:0008007-nucellar projection | denotes | nutritional properties |
| M_8 | 1293-1315 | cand:TO:0000890-seed coat proportion | denotes | nutritional properties |
| M_9 | 1293-1315 | cand:WTO:0000109-soil property | denotes | nutritional properties |
| M_10 | 1100-1117 | cand:TO:0000613-groat percentage | denotes | higher proportion |
| M_11 | 1100-1117 | cand:PPO:0000003-lower percent | denotes | higher proportion |
| M_12 | 1100-1117 | cand:TO:0000570-watery lesion percentage | denotes | higher proportion |
| M_13 | 1100-1117 | cand:WTO:0000173-percentage of florets without grain | denotes | higher proportion |
| M_14 | 1100-1117 | cand:TO:0000725-megasporocyte number | denotes | higher proportion |
| M_15 | 1100-1117 | cand:PPO:0000001-lower count | denotes | higher proportion |
| M_16 | 1100-1117 | cand:PO:0004706-flower primordium | denotes | higher proportion |
| M_17 | 1100-1117 | cand:TO:0000890-seed coat proportion | denotes | higher proportion |
| M_18 | 1100-1117 | cand:funRiceGene:210-HIGHER YIELD RICE | denotes | higher proportion |
| M_19 | 1100-1117 | cand:PO:0006089-anther primordium | denotes | higher proportion |
| M_20 | 1100-1117 | cand:WTO:0000049-reproduction | denotes | higher proportion |
| M_21 | 1413-1430 | cand:TO:0000372-amylose to amylopectin ratio | denotes | high-amylose rice |
| M_22 | 1413-1430 | cand:TO:0002655-starch grain size | denotes | high-amylose rice |
| M_23 | 1413-1430 | cand:TO:0000098-glutinous endosperm | denotes | high-amylose rice |
| M_24 | 1413-1430 | cand:TO:0000144-milled rice yield | denotes | high-amylose rice |
| M_25 | 1413-1430 | cand:WTO:0000149-grain starch content | denotes | high-amylose rice |
| M_26 | 1413-1430 | cand:TO:0002658-starch grain synthesis | denotes | high-amylose rice |
| M_27 | 1413-1430 | cand:funRiceGene:100-heat tolerance | denotes | high-amylose rice |
| M_28 | 1413-1430 | cand:PECO:0007196-light exposure | denotes | high-amylose rice |
| M_29 | 1413-1430 | cand:PO:0030018-gametophore | denotes | high-amylose rice |
| M_30 | 1413-1430 | cand:PO:0025141-phyllome tip | denotes | high-amylose rice |
| M_31 | 1413-1430 | cand:funRiceGene:210-HIGHER YIELD RICE | denotes | high-amylose rice |
| M_32 | 1194-1211 | cand:TO:0000696-starch content | denotes | AC and RS content |
| M_33 | 1194-1211 | cand:TO:0000993-cellulose content | denotes | AC and RS content |
| M_34 | 1194-1211 | cand:WTO:0000164-moisture content of the grain | denotes | AC and RS content |
| M_35 | 1194-1211 | cand:TO:1000063-shoot system magnesium content | denotes | AC and RS content |
| M_36 | 1194-1211 | cand:WTO:0000025-high grain protein content | denotes | AC and RS content |
| M_37 | 1194-1211 | cand:TO:0000602-total fat content | denotes | AC and RS content |
| M_38 | 1194-1211 | cand:TO:0020091-manganese content | denotes | AC and RS content |
| M_39 | 1194-1211 | cand:TO:0000955-cyanide content | denotes | AC and RS content |
| M_40 | 1194-1211 | cand:TO:0000932-mannose content | denotes | AC and RS content |
| M_41 | 1194-1211 | cand:TO:0000466-carbon content | denotes | AC and RS content |
| M_42 | 1194-1211 | cand:TO:0000333-sugar content | denotes | AC and RS content |
| M_43 | 1079-1084 | GeneID:NA | denotes | sbeII |
| M_44 | 1471-1477 | GeneID:RAPID:Os02g0528200MSUID:LOC_Os02g32660GraID:GR:0060839 | denotes | SBEIIb |
| M_45 | 1051-1055 | GeneID:NA | denotes | sbeI |
| M_46 | 1079-1083 | GeneID:NA | denotes | sbeI |
| T91389 | 152-161 | funRiceGene:269 | denotes | resistant |
| T35372 | 1293-1315 | xzyao:44798 | denotes | nutritional properties |
| T79842 | 85-109 | xzyao:17013 | denotes | Starch Branching Enzymes |
| T84812 | 301-317 | xzyao:2611 | denotes | branching enzyme |
| T16205 | 1100-1117 | xzyao:23774 | denotes | higher proportion |
| T9369 | 230-250 | xzyao:30463 | denotes | chemical mutagenesis |
| T80324 | 1261-1288 | xzyao:28204 | denotes | thus altered fine structure |
| T369 | 127-142 | TO:0000196, xzyao:37574 | denotes | amylose content |
| T67159 | 230-238 | WTO:0000069 | denotes | chemical |
| T76988 | 381-400 | xzyao:623 | denotes | physical properties |
| T85531 | 254-270 | xzyao:33663 | denotes | RNA interference |
| T99366 | 85-91 | funRiceGene:143 | denotes | Starch |
| T25488 | 162-168 | funRiceGene:143 | denotes | starch |
| T59984 | 294-300 | funRiceGene:143 | denotes | starch |
| T96252 | 404-410 | funRiceGene:143 | denotes | starch |
| T25564 | 455-461 | funRiceGene:143 | denotes | starch |
| T37865 | 1319-1325 | funRiceGene:143 | denotes | starch |
| T94219 | 92-101 | funRiceGene:525 | denotes | Branching |
| T24267 | 301-310 | funRiceGene:525 | denotes | branching |
| T10399 | 462-471 | funRiceGene:525 | denotes | branching |
| T71543 | 1201-1211 | xzyao:19829 | denotes | RS content |
| T39447 | 294-317 | xzyao:3088 | denotes | starch branching enzyme |
| T41144 | 111-118 | hunflair:NA:Species | denotes | Cereals |
| T82624 | 565-569 | hunflair:NA:Gene | denotes | SBEI |
| T51333 | 671-675 | hunflair:NA:Gene | denotes | SBEI |
| T98959 | 40-46 | hunflair:NA:Gene | denotes | CRISPR |
| T62308 | 506-512 | hunflair:NA:Gene | denotes | CRISPR |
| T35967 | 1439-1445 | hunflair:NA:Gene | denotes | CRISPR |
| T45001 | 744-763 | hunflair:NA:CellLine | denotes | homozygous T0 lines |
| T99001 | 1079-1084 | hunflair:NA:Gene | denotes | sbeII |
| T29306 | 319-322 | hunflair:NA:Gene | denotes | SBE |
| T2418 | 1051-1055 | hunflair:NA:Gene | denotes | sbeI |
| T55736 | 47-60 | hunflair:NA:Gene | denotes | Cas9-Mediated |
| T57229 | 27-31 | hunflair:NA:Species | denotes | Rice |
| T46822 | 574-580 | hunflair:NA:Gene | denotes | SBEIIb |
| T61656 | 680-686 | hunflair:NA:Gene | denotes | SBEIIb |
| T73684 | 1471-1477 | hunflair:NA:Gene | denotes | SBEIIb |
| T53438 | 1446-1459 | hunflair:NA:Gene | denotes | Cas9-mediated |
| T50990 | 821-837 | hunflair:NA:CellLine | denotes | bi-allelic lines |
| T26689 | 584-588 | hunflair:NA:Species | denotes | rice |
| T1120 | 1426-1430 | hunflair:NA:Species | denotes | rice |
| T14751 | 294-317 | hunflair:NA:Gene | denotes | starch branching enzyme |
| T29034 | 584-588 | pubtator:4530:Species | denotes | rice |
| T7013 | 1426-1430 | pubtator:4530:Species | denotes | rice |
| T39075 | 27-31 | pubtator:4530:Species | denotes | Rice |
| T1547 | 85-101 | pubtator:MESH:D015356:Disease | denotes | Starch Branching |
21k_plant_trait_mention
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| M_0 | 230-238 | WTO:0000069 | denotes | chemical |
| M_1 | 162-168 | funRiceGene:143 | denotes | starch |
| M_2 | 294-300 | funRiceGene:143 | denotes | starch |
| M_3 | 455-461 | funRiceGene:143 | denotes | starch |
| M_4 | 127-142 | xzyao:2145 | denotes | amylose content |
| M_5 | 301-310 | funRiceGene:525 | denotes | branching |
| M_6 | 462-471 | funRiceGene:525 | denotes | branching |
| M_7 | 152-161 | funRiceGene:269 | denotes | resistant |
| M_8 | 127-142 | TO:0000196, xzyao:11214 | denotes | amylose content |
| M_9 | 319-322 | hunflair:NA:Gene | denotes | SBE |
| M_10 | 1051-1055 | hunflair:NA:Gene | denotes | sbeI |
| M_11 | 294-317 | hunflair:NA:Gene | denotes | starch branching enzyme |
| M_12 | 821-837 | hunflair:NA:CellLine | denotes | bi-allelic lines |
| M_13 | 744-763 | hunflair:NA:CellLine | denotes | homozygous T0 lines |
| M_14 | 47-60 | hunflair:NA:Gene | denotes | Cas9-Mediated |
| M_15 | 584-588 | hunflair:NA:Species | denotes | rice |
| M_16 | 1426-1430 | hunflair:NA:Species | denotes | rice |
| M_17 | 1079-1084 | hunflair:NA:Gene | denotes | sbeII |
| M_18 | 111-118 | hunflair:NA:Species | denotes | Cereals |
| M_19 | 40-46 | hunflair:NA:Gene | denotes | CRISPR |
| M_20 | 506-512 | hunflair:NA:Gene | denotes | CRISPR |
| M_21 | 1439-1445 | hunflair:NA:Gene | denotes | CRISPR |
| M_22 | 27-31 | hunflair:NA:Species | denotes | Rice |
| M_23 | 1446-1459 | hunflair:NA:Gene | denotes | Cas9-mediated |
| M_24 | 565-569 | hunflair:NA:Gene | denotes | SBEI |
| M_25 | 671-675 | hunflair:NA:Gene | denotes | SBEI |
| M_26 | 574-580 | hunflair:NA:Gene | denotes | SBEIIb |
| M_27 | 680-686 | hunflair:NA:Gene | denotes | SBEIIb |
| M_28 | 1471-1477 | hunflair:NA:Gene | denotes | SBEIIb |
| M_29 | 85-101 | pubtator:MESH:D015356:Disease | denotes | Starch Branching |
| M_30 | 27-31 | pubtator:4530:Species | denotes | Rice |
| M_31 | 584-588 | pubtator:4530:Species | denotes | rice |
| M_32 | 1426-1430 | pubtator:4530:Species | denotes | rice |
OryzaGP_2022
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 14-26 | http://identifiers.org/oryzabase.gene/25 | denotes | High-Amylose |
| T2 | 1413-1425 | http://identifiers.org/oryzabase.gene/25 | denotes | high-amylose |
OryzaGP_2021_v2
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 565-569 | http://identifiers.org/oryzabase.gene/730 | denotes | SBEI |
| T2 | 574-580 | http://identifiers.org/oryzabase.gene/503 | denotes | SBEIIb |
| T3 | 671-675 | http://identifiers.org/oryzabase.gene/730 | denotes | SBEI |
| T4 | 680-686 | http://identifiers.org/oryzabase.gene/503 | denotes | SBEIIb |
| T5 | 1471-1477 | http://identifiers.org/oryzabase.gene/503 | denotes | SBEIIb |
| T23264 | 565-569 | http://identifiers.org/rapdb.locus/Os06g0726400 | denotes | SBEI |
| T5986 | 574-580 | http://identifiers.org/rapdb.locus/Os02g0528200 | denotes | SBEIIb |
| T3640 | 671-675 | http://identifiers.org/rapdb.locus/Os06g0726400 | denotes | SBEI |
| T11240 | 680-686 | http://identifiers.org/rapdb.locus/Os02g0528200 | denotes | SBEIIb |
| T77547 | 1471-1477 | http://identifiers.org/rapdb.locus/Os02g0528200 | denotes | SBEIIb |
OryzaGP_2021_FLAIR
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| M_0 | 744-763 | hunflair:NA:CellLine | denotes | homozygous T0 lines |
| M_1 | 1079-1084 | hunflair:NA:Gene | denotes | sbeII |
| M_2 | 27-31 | hunflair:NA:Species | denotes | Rice |
| M_3 | 821-837 | hunflair:NA:CellLine | denotes | bi-allelic lines |
| M_4 | 47-60 | hunflair:NA:Gene | denotes | Cas9-Mediated |
| M_5 | 1051-1055 | hunflair:NA:Gene | denotes | sbeI |
| M_6 | 565-569 | hunflair:NA:Gene | denotes | SBEI |
| M_7 | 671-675 | hunflair:NA:Gene | denotes | SBEI |
| M_8 | 584-588 | hunflair:NA:Species | denotes | rice |
| M_9 | 1426-1430 | hunflair:NA:Species | denotes | rice |
| M_10 | 319-322 | hunflair:NA:Gene | denotes | SBE |
| M_11 | 40-46 | hunflair:NA:Gene | denotes | CRISPR |
| M_12 | 506-512 | hunflair:NA:Gene | denotes | CRISPR |
| M_13 | 1439-1445 | hunflair:NA:Gene | denotes | CRISPR |
| M_14 | 294-317 | hunflair:NA:Gene | denotes | starch branching enzyme |
| M_15 | 111-118 | hunflair:NA:Species | denotes | Cereals |
| M_16 | 1446-1459 | hunflair:NA:Gene | denotes | Cas9-mediated |
| M_17 | 574-580 | hunflair:NA:Gene | denotes | SBEIIb |
| M_18 | 680-686 | hunflair:NA:Gene | denotes | SBEIIb |
| M_19 | 1471-1477 | hunflair:NA:Gene | denotes | SBEIIb |
OryzaGP_2021
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 574-580 | http://identifiers.org/oryzabase.gene/503 | denotes | SBEIIb |
| T2 | 680-686 | http://identifiers.org/oryzabase.gene/503 | denotes | SBEIIb |
| T3 | 1471-1477 | http://identifiers.org/oryzabase.gene/503 | denotes | SBEIIb |
| T95648 | 565-569 | http://identifiers.org/ricegap/LOC_Os06g51084 | denotes | SBEI |
| T48868 | 574-580 | http://identifiers.org/ricegap/LOC_Os02g32660 | denotes | SBEIIb |
| T6102 | 671-675 | http://identifiers.org/ricegap/LOC_Os06g51084 | denotes | SBEI |
| T4 | 680-686 | http://identifiers.org/ricegap/LOC_Os02g32660 | denotes | SBEIIb |
| T5 | 1051-1055 | http://identifiers.org/ricegap/LOC_Os06g51084 | denotes | sbeI |
| T6 | 1471-1477 | http://identifiers.org/ricegap/LOC_Os02g32660 | denotes | SBEIIb |
| T356 | 565-569 | http://identifiers.org/rapdb.locus/Os06g0726400 | denotes | SBEI |
| T57291 | 574-580 | http://identifiers.org/rapdb.locus/Os02g0528200 | denotes | SBEIIb |
| T38792 | 671-675 | http://identifiers.org/rapdb.locus/Os06g0726400 | denotes | SBEI |
| T21898 | 680-686 | http://identifiers.org/rapdb.locus/Os02g0528200 | denotes | SBEIIb |
| T84220 | 1051-1055 | http://identifiers.org/rapdb.locus/Os06g0726400 | denotes | sbeI |
| T12050 | 1471-1477 | http://identifiers.org/rapdb.locus/Os02g0528200 | denotes | SBEIIb |
| T55540 | 574-580 | http://identifiers.org/uniprot/Q6H6P8 | denotes | SBEIIb |
| T39790 | 680-686 | http://identifiers.org/uniprot/Q6H6P8 | denotes | SBEIIb |
| T47025 | 1471-1477 | http://identifiers.org/uniprot/Q6H6P8 | denotes | SBEIIb |
| M_0 | 744-763 | hunflair:NA:CellLine | denotes | homozygous T0 lines |
| M_1 | 1079-1084 | hunflair:NA:Gene | denotes | sbeII |
| M_2 | 27-31 | hunflair:NA:Species | denotes | Rice |
| M_3 | 821-837 | hunflair:NA:CellLine | denotes | bi-allelic lines |
| M_4 | 47-60 | hunflair:NA:Gene | denotes | Cas9-Mediated |
| M_5 | 1051-1055 | hunflair:NA:Gene | denotes | sbeI |
| M_6 | 565-569 | hunflair:NA:Gene | denotes | SBEI |
| M_7 | 671-675 | hunflair:NA:Gene | denotes | SBEI |
| M_8 | 584-588 | hunflair:NA:Species | denotes | rice |
| M_9 | 1426-1430 | hunflair:NA:Species | denotes | rice |
| M_10 | 319-322 | hunflair:NA:Gene | denotes | SBE |
| M_11 | 40-46 | hunflair:NA:Gene | denotes | CRISPR |
| M_12 | 506-512 | hunflair:NA:Gene | denotes | CRISPR |
| M_13 | 1439-1445 | hunflair:NA:Gene | denotes | CRISPR |
| M_14 | 294-317 | hunflair:NA:Gene | denotes | starch branching enzyme |
| M_15 | 111-118 | hunflair:NA:Species | denotes | Cereals |
| M_16 | 1446-1459 | hunflair:NA:Gene | denotes | Cas9-mediated |
| M_17 | 574-580 | hunflair:NA:Gene | denotes | SBEIIb |
| M_18 | 680-686 | hunflair:NA:Gene | denotes | SBEIIb |
| M_19 | 1471-1477 | hunflair:NA:Gene | denotes | SBEIIb |
funRiceGenes-all
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| PTO-all_T1 | 85-91 | http://purl.obolibrary.org/obo/TO_0000698 | denotes | Starch |
| PTO-all_T2 | 127-142 | http://purl.obolibrary.org/obo/TO_0000196 | denotes | amylose content |
| PTO-all_T3 | 144-146 | http://purl.obolibrary.org/obo/TO_0000294 | denotes | AC |
| PTO-all_T4 | 162-168 | http://purl.obolibrary.org/obo/TO_0000698 | denotes | starch |
| PTO-all_T5 | 294-300 | http://purl.obolibrary.org/obo/TO_0000698 | denotes | starch |
| PTO-all_T6 | 404-410 | http://purl.obolibrary.org/obo/TO_0000698 | denotes | starch |
| PTO-all_T7 | 455-461 | http://purl.obolibrary.org/obo/TO_0000698 | denotes | starch |
| PTO-all_T8 | 1194-1196 | http://purl.obolibrary.org/obo/TO_0000294 | denotes | AC |
| PTO-all_T9 | 1319-1325 | http://purl.obolibrary.org/obo/TO_0000698 | denotes | starch |
funRiceGenes-exact
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| PTO-exact_T1 | 127-142 | http://purl.obolibrary.org/obo/TO_0000196 | denotes | amylose content |