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GoldHamster

Id Subject Object Predicate Lexical cue
T1 127-132 D001717 denotes Birds
T2 184-193 D010271 denotes parasites
T3 339-347 D010271 denotes parasite
T4 724-733 D010271 denotes parasites
T5 1020-1030 1194440 denotes Plasmodium
T6 1020-1030 587366 denotes Plasmodium
T7 1020-1030 85471 denotes Plasmodium
T8 1020-1030 543282 denotes Plasmodium
T9 1020-1030 1273202 denotes Plasmodium
T10 1020-1030 1393785 denotes Plasmodium
T11 1020-1030 1892565 denotes Plasmodium
T12 1020-1030 255879 denotes Plasmodium
T13 1020-1030 1465755 denotes Plasmodium
T14 1020-1030 1973199 denotes Plasmodium
T15 1020-1030 587365 denotes Plasmodium
T16 1020-1030 5854 denotes Plasmodium
T17 1020-1030 2038114 denotes Plasmodium
T18 1020-1030 5833 denotes Plasmodium
T19 1020-1030 2038112 denotes Plasmodium
T20 1020-1030 1273152 denotes Plasmodium
T21 1020-1030 1823748 denotes Plasmodium
T22 1020-1030 587364 denotes Plasmodium
T23 1020-1030 195942 denotes Plasmodium
T24 1020-1030 2041146 denotes Plasmodium
T25 1020-1030 543276 denotes Plasmodium
T26 1020-1030 1206754 denotes Plasmodium
T27 1020-1030 D010961 denotes Plasmodium
T28 1032-1044 1817380 denotes Haemoproteus
T29 1032-1044 580619 denotes Haemoproteus
T30 1032-1044 1331872 denotes Haemoproteus
T31 1032-1044 580864 denotes Haemoproteus
T32 1032-1044 580611 denotes Haemoproteus
T33 1032-1044 580617 denotes Haemoproteus
T34 1032-1044 580626 denotes Haemoproteus
T35 1032-1044 580856 denotes Haemoproteus
T36 1032-1044 580615 denotes Haemoproteus
T37 1032-1044 907505 denotes Haemoproteus
T38 1032-1044 580851 denotes Haemoproteus
T39 1032-1044 1185467 denotes Haemoproteus
T40 1032-1044 1699097 denotes Haemoproteus
T41 1032-1044 580849 denotes Haemoproteus
T42 1032-1044 379408 denotes Haemoproteus
T43 1032-1044 1843713 denotes Haemoproteus
T44 1032-1044 498203 denotes Haemoproteus
T45 1032-1044 580860 denotes Haemoproteus
T46 1032-1044 580630 denotes Haemoproteus
T47 1032-1044 580844 denotes Haemoproteus
T48 1032-1044 2588638 denotes Haemoproteus
T49 1032-1044 2588640 denotes Haemoproteus
T50 1032-1044 580870 denotes Haemoproteus
T51 1032-1044 580640 denotes Haemoproteus
T52 1032-1044 580859 denotes Haemoproteus
T53 1032-1044 379409 denotes Haemoproteus
T54 1032-1044 907504 denotes Haemoproteus
T55 1032-1044 1850929 denotes Haemoproteus
T56 1032-1044 580847 denotes Haemoproteus
T57 1032-1044 580868 denotes Haemoproteus
T58 1032-1044 580637 denotes Haemoproteus
T59 1032-1044 580610 denotes Haemoproteus
T60 1032-1044 379406 denotes Haemoproteus
T61 1032-1044 707206 denotes Haemoproteus
T62 1032-1044 580633 denotes Haemoproteus
T63 1032-1044 2479768 denotes Haemoproteus
T64 1032-1044 580618 denotes Haemoproteus
T65 1032-1044 580613 denotes Haemoproteus
T66 1032-1044 580842 denotes Haemoproteus
T67 1032-1044 580616 denotes Haemoproteus
T68 1032-1044 580621 denotes Haemoproteus
T69 1032-1044 580846 denotes Haemoproteus
T70 1032-1044 580841 denotes Haemoproteus
T71 1032-1044 1843714 denotes Haemoproteus
T72 1032-1044 1663247 denotes Haemoproteus
T73 1032-1044 580636 denotes Haemoproteus
T74 1032-1044 580852 denotes Haemoproteus
T75 1032-1044 1941438 denotes Haemoproteus
T76 1032-1044 580855 denotes Haemoproteus
T77 1032-1044 1820340 denotes Haemoproteus
T78 1032-1044 580628 denotes Haemoproteus
T79 1032-1044 580632 denotes Haemoproteus
T80 1032-1044 580867 denotes Haemoproteus
T81 1032-1044 1842961 denotes Haemoproteus
T82 1032-1044 580635 denotes Haemoproteus
T83 1032-1044 580639 denotes Haemoproteus
T84 1032-1044 77522 denotes Haemoproteus
T85 1032-1044 580861 denotes Haemoproteus
T86 1032-1044 580627 denotes Haemoproteus
T87 1032-1044 580625 denotes Haemoproteus
T88 1032-1044 1075164 denotes Haemoproteus
T89 1032-1044 907502 denotes Haemoproteus
T90 1032-1044 2588641 denotes Haemoproteus
T91 1032-1044 580614 denotes Haemoproteus
T92 1032-1044 543284 denotes Haemoproteus
T93 1032-1044 580623 denotes Haemoproteus
T94 1032-1044 580620 denotes Haemoproteus
T95 1032-1044 389270 denotes Haemoproteus
T96 1032-1044 580634 denotes Haemoproteus
T97 1032-1044 580857 denotes Haemoproteus
T98 1032-1044 580850 denotes Haemoproteus
T99 1032-1044 580848 denotes Haemoproteus
T100 1032-1044 580866 denotes Haemoproteus
T101 1032-1044 580871 denotes Haemoproteus
T102 1032-1044 379410 denotes Haemoproteus
T103 1032-1044 580862 denotes Haemoproteus
T104 1032-1044 580869 denotes Haemoproteus
T105 1032-1044 580853 denotes Haemoproteus
T106 1032-1044 580865 denotes Haemoproteus
T107 1032-1044 580845 denotes Haemoproteus
T108 1032-1044 2588639 denotes Haemoproteus
T109 1032-1044 907503 denotes Haemoproteus
T110 1032-1044 580631 denotes Haemoproteus
T111 1032-1044 580863 denotes Haemoproteus
T112 1032-1044 580622 denotes Haemoproteus
T113 1032-1044 2588642 denotes Haemoproteus
T114 1032-1044 580854 denotes Haemoproteus
T115 1032-1044 580858 denotes Haemoproteus
T116 1032-1044 379416 denotes Haemoproteus
T117 1032-1044 580612 denotes Haemoproteus
T118 1032-1044 580638 denotes Haemoproteus
T119 1032-1044 580843 denotes Haemoproteus
T120 1032-1044 580624 denotes Haemoproteus
T121 1032-1044 580629 denotes Haemoproteus
T122 1074-1077 Q41249 denotes PCR
T123 1074-1077 O66148 denotes PCR
T124 1074-1077 Q59987 denotes PCR
T125 1074-1077 Q01289 denotes PCR
T126 1074-1077 O80333 denotes PCR
T127 1074-1077 P15904 denotes PCR
T128 1074-1077 Q9SDT1 denotes PCR
T129 1074-1077 Q39617 denotes PCR
T130 1101-1119 PR:000050197 denotes restriction enzyme
T131 1215-1223 D010271 denotes parasite
T132 1294-1302 D010271 denotes parasite
T133 1407-1415 D010271 denotes parasite
T134 1702-1720 PR:000050197 denotes restriction enzyme
T135 1743-1751 D010271 denotes parasite
T136 1783-1786 Q41249 denotes PCR
T137 1783-1786 O66148 denotes PCR
T138 1783-1786 Q59987 denotes PCR
T139 1783-1786 Q01289 denotes PCR
T140 1783-1786 O80333 denotes PCR
T141 1783-1786 P15904 denotes PCR
T142 1783-1786 Q9SDT1 denotes PCR
T143 1783-1786 Q39617 denotes PCR
T144 1828-1831 Q41249 denotes PCR
T145 1828-1831 O66148 denotes PCR
T146 1828-1831 Q59987 denotes PCR
T147 1828-1831 Q01289 denotes PCR
T148 1828-1831 O80333 denotes PCR
T149 1828-1831 P15904 denotes PCR
T150 1828-1831 Q9SDT1 denotes PCR
T151 1828-1831 Q39617 denotes PCR
T152 1928-1936 D010271 denotes parasite
T153 2068-2079 D018512 denotes parasitemia
T154 2068-2079 D018512 denotes parasitemia
T155 2295-2304 D007239 denotes infection
T156 2295-2304 D007239 denotes infection

PubMed_Structured_Abstracts

Id Subject Object Predicate Lexical cue
T1 127-885 BACKGROUND denotes Birds harbour an astonishing diversity of haemosporidian parasites. Renewed interest in avian haemosporidians as a model system has placed a greater emphasis on the development of screening protocols to estimate parasite prevalence and diversity. Prevalence estimates are often based on the molecular or blood-smear microscopy techniques. However, variation in diagnostic sensitivity among screening methodologies represents a potential source of bias that may lead to erroneous inference in comparisons of prevalence across studies. Here, we analyzed a suite of blood samples for the presence of parasites using four diagnostic tools and compared method-specific estimates of detection probability to assess the relative performance of screening strategies.
T2 895-1499 METHODS denotes We screened a total of 394 bird blood samples collected in India (n = 203) and Sweden (n = 191) for the combined presence of Plasmodium, Haemoproteus and Leucocytozoon with three PCR assays: (i) qPCR; (ii) restriction enzyme-based assay; and (iii) nested protocol. In addition, we examined blood smears for estimates of parasite intensity which was further screened using qPCR method to evaluate if parasite intensity shows a relationship with qPCR (Ct values). Furthermore, we used single infected samples from parasite intensities: low, medium, high, very high to establish the reproducibility in qPCR.
T3 1509-2186 RESULTS denotes For the combined data sets from India and Sweden, detection probability for submicroscopic and low intensity infections was highest for the qPCR method, followed by the nested protocol and the restriction enzyme-based assay. For high parasite intensities, the qPCR had high PCR reproducibility, with three out of three PCR replicates being positive and with consistent Ct values across all tenfold dilution series. For parasite intensities at very low and submicroscopic samples, the qPCR was reproducible in one out of the three replicates. The intensity of parasitemia estimated from smears showed inverse relationship with Ct values in both the Indian and Swedish data sets.
T4 2200-2556 CONCLUSIONS denotes Our study highlights the importance of accounting for methodological issues to better estimate infection in parasitological studies and illustrates how a wider deployment of diagnostic tools combined with statistical approaches is needed for each study, in order to provide adequate insight into the most appropriate approach to avoid erroneous inferences.

Goldhamster2_Cellosaurus

Id Subject Object Predicate Lexical cue
T1 71-72 CVCL_6479|Finite_cell_line|Mus musculus denotes a
T2 141-143 CVCL_8754|Cancer_cell_line|Homo sapiens denotes an
T3 141-143 CVCL_H241|Cancer_cell_line|Homo sapiens denotes an
T4 240-241 CVCL_6479|Finite_cell_line|Mus musculus denotes a
T5 255-258 CVCL_6758|Undefined_cell_line_type|Cricetulus griseus denotes has
T6 255-258 CVCL_E689|Transformed_cell_line|Homo sapiens denotes has
T7 266-267 CVCL_6479|Finite_cell_line|Mus musculus denotes a
T8 552-553 CVCL_6479|Finite_cell_line|Mus musculus denotes a
T9 584-587 CVCL_E773|Transformed_cell_line|Homo sapiens denotes may
T10 667-669 CVCL_5M23|Cancer_cell_line|Mesocricetus auratus denotes we
T11 679-680 CVCL_6479|Finite_cell_line|Mus musculus denotes a
T12 895-897 CVCL_5M23|Cancer_cell_line|Mesocricetus auratus denotes We
T13 907-908 CVCL_6479|Finite_cell_line|Mus musculus denotes a
T14 986-989 CVCL_J921|Hybridoma|Mus musculus denotes 191
T15 1173-1175 CVCL_5M23|Cancer_cell_line|Mesocricetus auratus denotes we
T16 1319-1320 CVCL_6479|Finite_cell_line|Mus musculus denotes a
T17 1370-1372 CVCL_5M23|Cancer_cell_line|Mesocricetus auratus denotes we
T18 1531-1535 CVCL_WY71|Spontaneously_immortalized_cell_line|Oncorhynchus keta denotes sets
T19 1832-1842 CVCL_XY58|Transformed_cell_line|Mus musculus denotes replicates
T20 2018-2021 CVCL_Z424|Spontaneously_immortalized_cell_line|Ostrinia nubilalis denotes one
T21 2039-2049 CVCL_XY58|Transformed_cell_line|Mus musculus denotes replicates
T22 2181-2185 CVCL_WY71|Spontaneously_immortalized_cell_line|Oncorhynchus keta denotes sets
T23 2352-2353 CVCL_6479|Finite_cell_line|Mus musculus denotes a