PubMed:28173633
Annnotations
pqqtest_sentence
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| M_0 | 62-70 | PO:0008037, funRiceGene:218 | denotes | seedling |
| M_1 | 318-326 | PO:0008037, funRiceGene:218 | denotes | seedling |
| M_2 | 968-976 | PO:0008037, funRiceGene:218 | denotes | seedling |
| M_3 | 1237-1245 | PO:0008037, funRiceGene:218 | denotes | seedling |
| M_4 | 1366-1374 | PO:0008037, funRiceGene:218 | denotes | seedling |
| M_5 | 1585-1593 | PO:0008037, funRiceGene:218 | denotes | seedling |
| M_6 | 1770-1778 | PO:0008037, funRiceGene:218 | denotes | seedling |
| M_7 | 261-275 | xzyao:38549 | denotes | previous study |
| M_8 | 1669-1680 | WTO:0000011, funRiceGene:359 | denotes | development |
| M_9 | 804-824 | xzyao:29649 | denotes | different expression |
| M_10 | 1264-1278 | xzyao:3470 | denotes | RIL population |
| M_11 | 863-874 | funRiceGene:346, xzyao:15326 | denotes | cold stress |
| M_12 | 1684-1692 | xzyao:38844 | denotes | the gene |
| M_13 | 814-833 | xzyao:38569 | denotes | expression patterns |
| M_14 | 40-44 | WTO:0000129, funRiceGene:509 | denotes | cold |
| M_15 | 116-120 | WTO:0000129, funRiceGene:509 | denotes | cold |
| M_16 | 176-180 | WTO:0000129, funRiceGene:509 | denotes | cold |
| M_17 | 238-242 | WTO:0000129, funRiceGene:509 | denotes | cold |
| M_18 | 293-297 | WTO:0000129, funRiceGene:509 | denotes | cold |
| M_19 | 381-385 | WTO:0000129, funRiceGene:509 | denotes | cold |
| M_20 | 463-467 | WTO:0000129, funRiceGene:509 | denotes | cold |
| M_21 | 517-521 | WTO:0000129, funRiceGene:509 | denotes | cold |
| M_22 | 863-867 | WTO:0000129, funRiceGene:509 | denotes | cold |
| M_23 | 933-937 | WTO:0000129, funRiceGene:509 | denotes | cold |
| M_24 | 977-981 | WTO:0000129, funRiceGene:509 | denotes | cold |
| M_25 | 1246-1250 | WTO:0000129, funRiceGene:509 | denotes | cold |
| M_26 | 1344-1348 | WTO:0000129, funRiceGene:509 | denotes | cold |
| M_27 | 1563-1567 | WTO:0000129, funRiceGene:509 | denotes | cold |
| M_28 | 1748-1752 | WTO:0000129, funRiceGene:509 | denotes | cold |
| M_29 | 8-23 | xzyao:31476 | denotes | functional gene |
| M_30 | 1468-1483 | xzyao:31476 | denotes | functional gene |
| M_31 | 1631-1646 | xzyao:31476 | denotes | functional gene |
| M_32 | 1399-1415 | xzyao:27524 | denotes | wild-type plants |
| M_33 | 468-484 | xzyao:11659 | denotes | tolerant variety |
| M_34 | 1335-1358 | xzyao:44265 | denotes | enhanced cold tolerance |
| M_35 | 868-874 | funRiceGene:361 | denotes | stress |
| M_36 | 45-54 | funRiceGene:214 | denotes | tolerance |
| M_37 | 243-252 | funRiceGene:214 | denotes | tolerance |
| M_38 | 982-991 | funRiceGene:214 | denotes | tolerance |
| M_39 | 1251-1260 | funRiceGene:214 | denotes | tolerance |
| M_40 | 1349-1358 | funRiceGene:214 | denotes | tolerance |
| M_41 | 1568-1577 | funRiceGene:214 | denotes | tolerance |
| M_42 | 1753-1762 | funRiceGene:214 | denotes | tolerance |
| M_43 | 40-54 | TO:0000303, funRiceGene:81, xzyao:22726 | denotes | cold tolerance |
| M_44 | 238-252 | TO:0000303, funRiceGene:81, xzyao:22726 | denotes | cold tolerance |
| M_45 | 977-991 | TO:0000303, funRiceGene:81, xzyao:22726 | denotes | cold tolerance |
| M_46 | 1246-1260 | TO:0000303, funRiceGene:81, xzyao:22726 | denotes | cold tolerance |
| M_47 | 1344-1358 | TO:0000303, funRiceGene:81, xzyao:22726 | denotes | cold tolerance |
| M_48 | 1563-1577 | TO:0000303, funRiceGene:81, xzyao:22726 | denotes | cold tolerance |
| M_49 | 1748-1762 | TO:0000303, funRiceGene:81, xzyao:22726 | denotes | cold tolerance |
| M_50 | 225-233 | funRiceGene:189 | denotes | breeding |
| M_51 | 1735-1743 | funRiceGene:189 | denotes | breeding |
| M_52 | 80-84 | hunflair:NA:Species | denotes | rice |
| M_53 | 220-224 | hunflair:NA:Species | denotes | rice |
| M_54 | 1603-1607 | hunflair:NA:Species | denotes | rice |
| M_55 | 1788-1792 | hunflair:NA:Species | denotes | rice |
| M_56 | 999-1007 | hunflair:NA:CellLine | denotes | RI lines |
| M_57 | 781-793 | hunflair:NA:Gene | denotes | Os09g0410300 |
| M_58 | 951-963 | hunflair:NA:Gene | denotes | Os09g0410300 |
| M_59 | 1053-1065 | hunflair:NA:Gene | denotes | Os09g0410300 |
| M_60 | 1289-1301 | hunflair:NA:Gene | denotes | Os09g0410300 |
| M_61 | 1448-1460 | hunflair:NA:Gene | denotes | Os09g0410300 |
| M_62 | 80-84 | pubtator:4530:Species | denotes | rice |
| M_63 | 220-224 | pubtator:4530:Species | denotes | rice |
| M_64 | 1603-1607 | pubtator:4530:Species | denotes | rice |
| M_65 | 1788-1792 | pubtator:4530:Species | denotes | rice |
21k_plant_trait_mention
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| M_0 | 977-991 | TO:0000303, funRiceGene:81, xzyao:3220 | denotes | cold tolerance |
| M_1 | 1246-1260 | TO:0000303, funRiceGene:81, xzyao:3220 | denotes | cold tolerance |
| M_2 | 1344-1358 | TO:0000303, funRiceGene:81, xzyao:3220 | denotes | cold tolerance |
| M_3 | 1563-1577 | TO:0000303, funRiceGene:81, xzyao:3220 | denotes | cold tolerance |
| M_4 | 1748-1762 | TO:0000303, funRiceGene:81, xzyao:3220 | denotes | cold tolerance |
| M_5 | 982-991 | funRiceGene:214 | denotes | tolerance |
| M_6 | 1251-1260 | funRiceGene:214 | denotes | tolerance |
| M_7 | 1349-1358 | funRiceGene:214 | denotes | tolerance |
| M_8 | 1568-1577 | funRiceGene:214 | denotes | tolerance |
| M_9 | 1753-1762 | funRiceGene:214 | denotes | tolerance |
| M_10 | 933-947 | xzyao:1201 | denotes | cold induction |
| M_11 | 225-233 | funRiceGene:189 | denotes | breeding |
| M_12 | 1735-1743 | funRiceGene:189 | denotes | breeding |
| M_13 | 318-326 | PO:0008037, funRiceGene:218 | denotes | seedling |
| M_14 | 968-976 | PO:0008037, funRiceGene:218 | denotes | seedling |
| M_15 | 1237-1245 | PO:0008037, funRiceGene:218 | denotes | seedling |
| M_16 | 1366-1374 | PO:0008037, funRiceGene:218 | denotes | seedling |
| M_17 | 1585-1593 | PO:0008037, funRiceGene:218 | denotes | seedling |
| M_18 | 1770-1778 | PO:0008037, funRiceGene:218 | denotes | seedling |
| M_19 | 176-180 | WTO:0000129, funRiceGene:509 | denotes | cold |
| M_20 | 238-242 | WTO:0000129, funRiceGene:509 | denotes | cold |
| M_21 | 381-385 | WTO:0000129, funRiceGene:509 | denotes | cold |
| M_22 | 863-867 | WTO:0000129, funRiceGene:509 | denotes | cold |
| M_23 | 933-937 | WTO:0000129, funRiceGene:509 | denotes | cold |
| M_24 | 977-981 | WTO:0000129, funRiceGene:509 | denotes | cold |
| M_25 | 1246-1250 | WTO:0000129, funRiceGene:509 | denotes | cold |
| M_26 | 1344-1348 | WTO:0000129, funRiceGene:509 | denotes | cold |
| M_27 | 1563-1567 | WTO:0000129, funRiceGene:509 | denotes | cold |
| M_28 | 1748-1752 | WTO:0000129, funRiceGene:509 | denotes | cold |
| M_29 | 1669-1680 | WTO:0000011, funRiceGene:359 | denotes | development |
| M_30 | 463-484 | xzyao:1678 | denotes | cold-tolerant variety |
| M_31 | 80-84 | hunflair:NA:Species | denotes | rice |
| M_32 | 220-224 | hunflair:NA:Species | denotes | rice |
| M_33 | 1603-1607 | hunflair:NA:Species | denotes | rice |
| M_34 | 1788-1792 | hunflair:NA:Species | denotes | rice |
| M_35 | 999-1007 | hunflair:NA:CellLine | denotes | RI lines |
| M_36 | 781-793 | hunflair:NA:Gene | denotes | Os09g0410300 |
| M_37 | 951-963 | hunflair:NA:Gene | denotes | Os09g0410300 |
| M_38 | 1053-1065 | hunflair:NA:Gene | denotes | Os09g0410300 |
| M_39 | 1289-1301 | hunflair:NA:Gene | denotes | Os09g0410300 |
| M_40 | 1448-1460 | hunflair:NA:Gene | denotes | Os09g0410300 |
| M_41 | 80-84 | pubtator:4530:Species | denotes | rice |
| M_42 | 220-224 | pubtator:4530:Species | denotes | rice |
| M_43 | 1603-1607 | pubtator:4530:Species | denotes | rice |
| M_44 | 1788-1792 | pubtator:4530:Species | denotes | rice |
OryzaGP_2021
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 40-54 | http://identifiers.org/oryzabase.gene/6368 | denotes | cold tolerance |
| T2 | 40-54 | http://identifiers.org/oryzabase.gene/6367 | denotes | cold tolerance |
| T3 | 40-54 | http://identifiers.org/oryzabase.gene/6366 | denotes | cold tolerance |
| T4 | 40-54 | http://identifiers.org/oryzabase.gene/6365 | denotes | cold tolerance |
| T5 | 238-252 | http://identifiers.org/oryzabase.gene/6368 | denotes | cold tolerance |
| T6 | 238-252 | http://identifiers.org/oryzabase.gene/6367 | denotes | cold tolerance |
| T7 | 238-252 | http://identifiers.org/oryzabase.gene/6366 | denotes | cold tolerance |
| T8 | 238-252 | http://identifiers.org/oryzabase.gene/6365 | denotes | cold tolerance |
| T9 | 334-340 | http://identifiers.org/oryzabase.gene/21658 | denotes | qCTS-9 |
| T10 | 613-619 | http://identifiers.org/oryzabase.gene/21658 | denotes | qCTS-9 |
| T11 | 977-991 | http://identifiers.org/oryzabase.gene/6368 | denotes | cold tolerance |
| T12 | 977-991 | http://identifiers.org/oryzabase.gene/6367 | denotes | cold tolerance |
| T13 | 977-991 | http://identifiers.org/oryzabase.gene/6366 | denotes | cold tolerance |
| T14 | 977-991 | http://identifiers.org/oryzabase.gene/6365 | denotes | cold tolerance |
| T15 | 999-1001 | http://identifiers.org/oryzabase.gene/682 | denotes | RI |
| T16 | 999-1001 | http://identifiers.org/oryzabase.gene/6818 | denotes | RI |
| T17 | 1246-1260 | http://identifiers.org/oryzabase.gene/6368 | denotes | cold tolerance |
| T18 | 1246-1260 | http://identifiers.org/oryzabase.gene/6367 | denotes | cold tolerance |
| T19 | 1246-1260 | http://identifiers.org/oryzabase.gene/6366 | denotes | cold tolerance |
| T20 | 1246-1260 | http://identifiers.org/oryzabase.gene/6365 | denotes | cold tolerance |
| T21 | 1344-1358 | http://identifiers.org/oryzabase.gene/6368 | denotes | cold tolerance |
| T22 | 1344-1358 | http://identifiers.org/oryzabase.gene/6367 | denotes | cold tolerance |
| T23 | 1344-1358 | http://identifiers.org/oryzabase.gene/6366 | denotes | cold tolerance |
| T24 | 1344-1358 | http://identifiers.org/oryzabase.gene/6365 | denotes | cold tolerance |
| T25 | 1495-1501 | http://identifiers.org/oryzabase.gene/21658 | denotes | qCTS-9 |
| T26 | 1563-1577 | http://identifiers.org/oryzabase.gene/6368 | denotes | cold tolerance |
| T27 | 1563-1577 | http://identifiers.org/oryzabase.gene/6367 | denotes | cold tolerance |
| T28 | 1563-1577 | http://identifiers.org/oryzabase.gene/6366 | denotes | cold tolerance |
| T29 | 1563-1577 | http://identifiers.org/oryzabase.gene/6365 | denotes | cold tolerance |
| T30 | 1658-1664 | http://identifiers.org/oryzabase.gene/21658 | denotes | qCTS-9 |
| T31 | 1748-1762 | http://identifiers.org/oryzabase.gene/6368 | denotes | cold tolerance |
| T32 | 1748-1762 | http://identifiers.org/oryzabase.gene/6367 | denotes | cold tolerance |
| T33 | 1748-1762 | http://identifiers.org/oryzabase.gene/6366 | denotes | cold tolerance |
| T34 | 1748-1762 | http://identifiers.org/oryzabase.gene/6365 | denotes | cold tolerance |
| T35 | 1852-1855 | http://identifiers.org/oryzabase.gene/7170 | denotes | MAS |
| T49188 | 334-340 | http://identifiers.org/ricegap/LOC_Os09g24440 | denotes | qCTS-9 |
| T13894 | 613-619 | http://identifiers.org/ricegap/LOC_Os09g24440 | denotes | qCTS-9 |
| T53639 | 999-1001 | http://identifiers.org/ricegap/LOC_Os05g38120 | denotes | RI |
| T21582 | 1495-1501 | http://identifiers.org/ricegap/LOC_Os09g24440 | denotes | qCTS-9 |
| T22439 | 1658-1664 | http://identifiers.org/ricegap/LOC_Os09g24440 | denotes | qCTS-9 |
| T59571 | 1852-1855 | http://identifiers.org/ricegap/LOC_Os04g10010 | denotes | MAS |
| T88918 | 334-340 | http://identifiers.org/rapdb.locus/Os09g0410300 | denotes | qCTS-9 |
| T75474 | 613-619 | http://identifiers.org/rapdb.locus/Os09g0410300 | denotes | qCTS-9 |
| T78082 | 999-1001 | http://identifiers.org/rapdb.locus/Os05g0455200 | denotes | RI |
| T16163 | 1495-1501 | http://identifiers.org/rapdb.locus/Os09g0410300 | denotes | qCTS-9 |
| T77668 | 1658-1664 | http://identifiers.org/rapdb.locus/Os09g0410300 | denotes | qCTS-9 |
| T57868 | 1852-1855 | http://identifiers.org/rapdb.locus/Os04g0179200 | denotes | MAS |
| T7358 | 334-340 | http://identifiers.org/uniprot/Q761Z4 | denotes | qCTS-9 |
| T45296 | 613-619 | http://identifiers.org/uniprot/Q761Z4 | denotes | qCTS-9 |
| T68353 | 999-1001 | http://identifiers.org/uniprot/Q60EM7 | denotes | RI |
| T88940 | 999-1001 | http://identifiers.org/uniprot/D4QFI4 | denotes | RI |
| T56231 | 1495-1501 | http://identifiers.org/uniprot/Q761Z4 | denotes | qCTS-9 |
| T81479 | 1658-1664 | http://identifiers.org/uniprot/Q761Z4 | denotes | qCTS-9 |
| T22690 | 1852-1855 | http://identifiers.org/uniprot/Q01M90 | denotes | MAS |
| M_0 | 999-1007 | hunflair:NA:CellLine | denotes | RI lines |
| M_1 | 781-793 | hunflair:NA:Gene | denotes | Os09g0410300 |
| M_2 | 951-963 | hunflair:NA:Gene | denotes | Os09g0410300 |
| M_3 | 1053-1065 | hunflair:NA:Gene | denotes | Os09g0410300 |
| M_4 | 1289-1301 | hunflair:NA:Gene | denotes | Os09g0410300 |
| M_5 | 1448-1460 | hunflair:NA:Gene | denotes | Os09g0410300 |
| M_6 | 80-84 | hunflair:NA:Species | denotes | rice |
| M_7 | 220-224 | hunflair:NA:Species | denotes | rice |
| M_8 | 1603-1607 | hunflair:NA:Species | denotes | rice |
| M_9 | 1788-1792 | hunflair:NA:Species | denotes | rice |
OryzaGP_2022
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 40-54 | http://identifiers.org/oryzabase.gene/6368 | denotes | cold tolerance |
| T2 | 40-54 | http://identifiers.org/oryzabase.gene/6367 | denotes | cold tolerance |
| T3 | 40-54 | http://identifiers.org/oryzabase.gene/6366 | denotes | cold tolerance |
| T4 | 40-54 | http://identifiers.org/oryzabase.gene/6365 | denotes | cold tolerance |
| T5 | 238-252 | http://identifiers.org/oryzabase.gene/6368 | denotes | cold tolerance |
| T6 | 238-252 | http://identifiers.org/oryzabase.gene/6367 | denotes | cold tolerance |
| T7 | 238-252 | http://identifiers.org/oryzabase.gene/6366 | denotes | cold tolerance |
| T8 | 238-252 | http://identifiers.org/oryzabase.gene/6365 | denotes | cold tolerance |
| T9 | 977-991 | http://identifiers.org/oryzabase.gene/6368 | denotes | cold tolerance |
| T10 | 977-991 | http://identifiers.org/oryzabase.gene/6367 | denotes | cold tolerance |
| T11 | 977-991 | http://identifiers.org/oryzabase.gene/6366 | denotes | cold tolerance |
| T12 | 977-991 | http://identifiers.org/oryzabase.gene/6365 | denotes | cold tolerance |
| T13 | 1246-1260 | http://identifiers.org/oryzabase.gene/6368 | denotes | cold tolerance |
| T14 | 1246-1260 | http://identifiers.org/oryzabase.gene/6367 | denotes | cold tolerance |
| T15 | 1246-1260 | http://identifiers.org/oryzabase.gene/6366 | denotes | cold tolerance |
| T16 | 1246-1260 | http://identifiers.org/oryzabase.gene/6365 | denotes | cold tolerance |
| T17 | 1344-1358 | http://identifiers.org/oryzabase.gene/6368 | denotes | cold tolerance |
| T18 | 1344-1358 | http://identifiers.org/oryzabase.gene/6367 | denotes | cold tolerance |
| T19 | 1344-1358 | http://identifiers.org/oryzabase.gene/6366 | denotes | cold tolerance |
| T20 | 1344-1358 | http://identifiers.org/oryzabase.gene/6365 | denotes | cold tolerance |
| T21 | 1563-1577 | http://identifiers.org/oryzabase.gene/6368 | denotes | cold tolerance |
| T22 | 1563-1577 | http://identifiers.org/oryzabase.gene/6367 | denotes | cold tolerance |
| T23 | 1563-1577 | http://identifiers.org/oryzabase.gene/6366 | denotes | cold tolerance |
| T24 | 1563-1577 | http://identifiers.org/oryzabase.gene/6365 | denotes | cold tolerance |
| T25 | 1748-1762 | http://identifiers.org/oryzabase.gene/6368 | denotes | cold tolerance |
| T26 | 1748-1762 | http://identifiers.org/oryzabase.gene/6367 | denotes | cold tolerance |
| T27 | 1748-1762 | http://identifiers.org/oryzabase.gene/6366 | denotes | cold tolerance |
| T28 | 1748-1762 | http://identifiers.org/oryzabase.gene/6365 | denotes | cold tolerance |
OryzaGP_2021_v2
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 334-340 | http://identifiers.org/oryzabase.gene/21658 | denotes | qCTS-9 |
| T2 | 613-619 | http://identifiers.org/oryzabase.gene/21658 | denotes | qCTS-9 |
| T3 | 999-1001 | http://identifiers.org/oryzabase.gene/682 | denotes | RI |
| T4 | 999-1001 | http://identifiers.org/oryzabase.gene/6818 | denotes | RI |
| T5 | 1495-1501 | http://identifiers.org/oryzabase.gene/21658 | denotes | qCTS-9 |
| T6 | 1658-1664 | http://identifiers.org/oryzabase.gene/21658 | denotes | qCTS-9 |
| T7 | 1852-1855 | http://identifiers.org/oryzabase.gene/7170 | denotes | MAS |
| T17913 | 334-340 | http://identifiers.org/rapdb.locus/Os09g0410300 | denotes | qCTS-9 |
| T80970 | 613-619 | http://identifiers.org/rapdb.locus/Os09g0410300 | denotes | qCTS-9 |
| T92905 | 781-793 | http://identifiers.org/rapdb.locus/Os09g0410300 | denotes | Os09g0410300 |
| T97519 | 951-963 | http://identifiers.org/rapdb.locus/Os09g0410300 | denotes | Os09g0410300 |
| T25471 | 999-1001 | http://identifiers.org/rapdb.locus/Os05g0455200 | denotes | RI |
| T32126 | 1053-1065 | http://identifiers.org/rapdb.locus/Os09g0410300 | denotes | Os09g0410300 |
| T90985 | 1289-1301 | http://identifiers.org/rapdb.locus/Os09g0410300 | denotes | Os09g0410300 |
| T8 | 1448-1460 | http://identifiers.org/rapdb.locus/Os09g0410300 | denotes | Os09g0410300 |
| T9 | 1495-1501 | http://identifiers.org/rapdb.locus/Os09g0410300 | denotes | qCTS-9 |
| T10 | 1658-1664 | http://identifiers.org/rapdb.locus/Os09g0410300 | denotes | qCTS-9 |
| T11 | 1852-1855 | http://identifiers.org/rapdb.locus/Os04g0179200 | denotes | MAS |
OryzaGP_2021_FLAIR
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| M_0 | 999-1007 | hunflair:NA:CellLine | denotes | RI lines |
| M_1 | 781-793 | hunflair:NA:Gene | denotes | Os09g0410300 |
| M_2 | 951-963 | hunflair:NA:Gene | denotes | Os09g0410300 |
| M_3 | 1053-1065 | hunflair:NA:Gene | denotes | Os09g0410300 |
| M_4 | 1289-1301 | hunflair:NA:Gene | denotes | Os09g0410300 |
| M_5 | 1448-1460 | hunflair:NA:Gene | denotes | Os09g0410300 |
| M_6 | 80-84 | hunflair:NA:Species | denotes | rice |
| M_7 | 220-224 | hunflair:NA:Species | denotes | rice |
| M_8 | 1603-1607 | hunflair:NA:Species | denotes | rice |
| M_9 | 1788-1792 | hunflair:NA:Species | denotes | rice |
funRiceGenes-all
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| PTO-all_T1 | 40-54 | http://purl.obolibrary.org/obo/TO_0000303 | denotes | cold tolerance |
| PTO-all_T2 | 116-129 | http://purl.obolibrary.org/obo/TO_0000303 | denotes | cold-tolerant |
| PTO-all_T3 | 238-252 | http://purl.obolibrary.org/obo/TO_0000303 | denotes | cold tolerance |
| PTO-all_T4 | 293-306 | http://purl.obolibrary.org/obo/TO_0000303 | denotes | cold-tolerant |
| PTO-all_T5 | 463-476 | http://purl.obolibrary.org/obo/TO_0000303 | denotes | cold-tolerant |
| PTO-all_T6 | 977-991 | http://purl.obolibrary.org/obo/TO_0000303 | denotes | cold tolerance |
| PTO-all_T7 | 1246-1260 | http://purl.obolibrary.org/obo/TO_0000303 | denotes | cold tolerance |
| PTO-all_T8 | 1344-1358 | http://purl.obolibrary.org/obo/TO_0000303 | denotes | cold tolerance |
| PTO-all_T9 | 1563-1577 | http://purl.obolibrary.org/obo/TO_0000303 | denotes | cold tolerance |
| PTO-all_T10 | 1748-1762 | http://purl.obolibrary.org/obo/TO_0000303 | denotes | cold tolerance |
funRiceGenes-exact
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| PTO-exact_T1 | 40-54 | http://purl.obolibrary.org/obo/TO_0000303 | denotes | cold tolerance |
| PTO-exact_T2 | 116-129 | http://purl.obolibrary.org/obo/TO_0000303 | denotes | cold-tolerant |
| PTO-exact_T3 | 238-252 | http://purl.obolibrary.org/obo/TO_0000303 | denotes | cold tolerance |
| PTO-exact_T4 | 293-306 | http://purl.obolibrary.org/obo/TO_0000303 | denotes | cold-tolerant |
| PTO-exact_T5 | 463-476 | http://purl.obolibrary.org/obo/TO_0000303 | denotes | cold-tolerant |
| PTO-exact_T6 | 977-991 | http://purl.obolibrary.org/obo/TO_0000303 | denotes | cold tolerance |
| PTO-exact_T7 | 1246-1260 | http://purl.obolibrary.org/obo/TO_0000303 | denotes | cold tolerance |
| PTO-exact_T8 | 1344-1358 | http://purl.obolibrary.org/obo/TO_0000303 | denotes | cold tolerance |
| PTO-exact_T9 | 1563-1577 | http://purl.obolibrary.org/obo/TO_0000303 | denotes | cold tolerance |
| PTO-exact_T10 | 1748-1762 | http://purl.obolibrary.org/obo/TO_0000303 | denotes | cold tolerance |
OryzaGP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 40-54 | gene | denotes | cold tolerance |
| T2 | 238-252 | gene | denotes | cold tolerance |
| T3 | 781-793 | gene | denotes | Os09g0410300 |
| T4 | 951-963 | gene | denotes | Os09g0410300 |
| T5 | 977-991 | gene | denotes | cold tolerance |
| T6 | 1053-1065 | gene | denotes | Os09g0410300 |
| T7 | 1246-1260 | gene | denotes | cold tolerance |
| T8 | 1289-1301 | gene | denotes | Os09g0410300 |
| T9 | 1344-1358 | gene | denotes | cold tolerance |
| T10 | 1448-1460 | gene | denotes | Os09g0410300 |
| T11 | 1495-1501 | gene | denotes | qCTS-9 |
| T12 | 1563-1577 | gene | denotes | cold tolerance |
| T13 | 1658-1664 | gene | denotes | qCTS-9 |
| T14 | 1748-1762 | gene | denotes | cold tolerance |
Oryza_sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-85 | Sentence | denotes | A novel functional gene associated with cold tolerance at the seedling stage in rice. |
| T2 | 86-253 | Sentence | denotes | Identification and cloning of cold-tolerant genes that can stably express under different cold environments are crucial for molecular rice breeding for cold tolerance. |
| T3 | 254-564 | Sentence | denotes | In the previous study, we identified a cold-tolerant QTL at the seedling stage, qCTS-9 which could be detected under different cold environments using a recombinant inbred line (RIL) population derived from a cold-tolerant variety Lijiangxintuanheigu (LTH) and a cold-sensitive variety Shanhuangzhan 2 (SHZ-2). |
| T4 | 565-745 | Sentence | denotes | In this study, eight candidate genes within the qCTS-9 interval were identified through integrated analysis of QTL mapping with genomewide differential expression profiling of LTH. |
| T5 | 746-1008 | Sentence | denotes | The qRT-PCR assay showed that only Os09g0410300 exhibited different expression patterns between LTH and SHZ-2 during cold stress, and significantly positive correlation was found between cold induction of Os09g0410300 and seedling cold tolerance in the RI lines. |
| T6 | 1009-1279 | Sentence | denotes | Five SNPs and one InDel in the promoters of Os09g0410300 were detected between LTH and SHZ-2, and the InDel marker ID410300 designed based on the insertion-deletion polymorphism in the promoter was significantly associated with seedling cold tolerance in RIL population. |
| T7 | 1280-1416 | Sentence | denotes | Further, Os09g0410300 over-expression plants exhibited enhanced cold tolerance at the seedling stage compared with the wild-type plants. |
| T8 | 1417-1502 | Sentence | denotes | Thus, our results suggest that Os09g0410300 is the functional gene underlying qCTS-9. |
| T9 | 1503-1608 | Sentence | denotes | To our knowledge, it is a novel gene contributed to enhance cold tolerance at the seedling stage in rice. |
| T10 | 1609-1857 | Sentence | denotes | Identification of the functional gene underlying qCTS-9 and development of the gene-specific marker will facilitate molecular breeding for cold tolerance at the seedling stage in rice through transgenic approach and marker-assisted selection (MAS). |