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OryzaGP_2021

Id Subject Object Predicate Lexical cue
T1 52-79 http://identifiers.org/oryzabase.gene/671 denotes phenylalanine ammonia-lyase
T2 52-79 http://identifiers.org/oryzabase.gene/6252 denotes phenylalanine ammonia-lyase
T3 52-79 http://identifiers.org/oryzabase.gene/16695 denotes phenylalanine ammonia-lyase
T4 52-79 http://identifiers.org/oryzabase.gene/12547 denotes phenylalanine ammonia-lyase
T5 175-202 http://identifiers.org/oryzabase.gene/671 denotes phenylalanine ammonia-lyase
T6 175-202 http://identifiers.org/oryzabase.gene/6252 denotes phenylalanine ammonia-lyase
T7 175-202 http://identifiers.org/oryzabase.gene/16695 denotes phenylalanine ammonia-lyase
T8 175-202 http://identifiers.org/oryzabase.gene/12547 denotes phenylalanine ammonia-lyase
T9 204-207 http://identifiers.org/oryzabase.gene/671 denotes PAL
T10 204-207 http://identifiers.org/oryzabase.gene/6252 denotes PAL
T11 204-207 http://identifiers.org/oryzabase.gene/12547 denotes PAL
T12 204-207 http://identifiers.org/oryzabase.gene/10463 denotes PAL
T13 400-403 http://identifiers.org/oryzabase.gene/671 denotes PAL
T14 400-403 http://identifiers.org/oryzabase.gene/6252 denotes PAL
T15 400-403 http://identifiers.org/oryzabase.gene/12547 denotes PAL
T16 400-403 http://identifiers.org/oryzabase.gene/10463 denotes PAL
T17 497-499 http://identifiers.org/oryzabase.gene/870 denotes bp
T18 740-742 http://identifiers.org/oryzabase.gene/20856 denotes GC
T19 865-868 http://identifiers.org/oryzabase.gene/671 denotes PAL
T20 865-868 http://identifiers.org/oryzabase.gene/6252 denotes PAL
T21 865-868 http://identifiers.org/oryzabase.gene/12547 denotes PAL
T22 865-868 http://identifiers.org/oryzabase.gene/10463 denotes PAL
T23 901-906 http://identifiers.org/oryzabase.gene/11165 denotes small
T24 1095-1122 http://identifiers.org/oryzabase.gene/671 denotes phenylalanine ammonia-lyase
T25 1095-1122 http://identifiers.org/oryzabase.gene/6252 denotes phenylalanine ammonia-lyase
T26 1095-1122 http://identifiers.org/oryzabase.gene/16695 denotes phenylalanine ammonia-lyase
T27 1095-1122 http://identifiers.org/oryzabase.gene/12547 denotes phenylalanine ammonia-lyase
T55606 52-79 http://identifiers.org/ricegap/LOC_Os11g48110 denotes phenylalanine ammonia-lyase
T65882 52-79 http://identifiers.org/ricegap/LOC_Os05g35290 denotes phenylalanine ammonia-lyase
T19314 52-79 http://identifiers.org/ricegap/LOC_Os02g41650 denotes phenylalanine ammonia-lyase
T82827 52-79 http://identifiers.org/ricegap/LOC_Os02g41630 denotes phenylalanine ammonia-lyase
T88934 175-202 http://identifiers.org/ricegap/LOC_Os11g48110 denotes phenylalanine ammonia-lyase
T94369 175-202 http://identifiers.org/ricegap/LOC_Os05g35290 denotes phenylalanine ammonia-lyase
T85744 175-202 http://identifiers.org/ricegap/LOC_Os02g41650 denotes phenylalanine ammonia-lyase
T19898 175-202 http://identifiers.org/ricegap/LOC_Os02g41630 denotes phenylalanine ammonia-lyase
T33012 204-207 http://identifiers.org/ricegap/LOC_Os05g35290 denotes PAL
T74372 204-207 http://identifiers.org/ricegap/LOC_Os02g41680 denotes PAL
T18350 204-207 http://identifiers.org/ricegap/LOC_Os02g41650 denotes PAL
T35071 204-207 http://identifiers.org/ricegap/LOC_Os02g41630 denotes PAL
T22664 204-207 http://identifiers.org/ricegap/LOC_Os11g48110 denotes PAL
T22262 400-403 http://identifiers.org/ricegap/LOC_Os05g35290 denotes PAL
T71385 400-403 http://identifiers.org/ricegap/LOC_Os02g41680 denotes PAL
T27870 400-403 http://identifiers.org/ricegap/LOC_Os02g41650 denotes PAL
T45986 400-403 http://identifiers.org/ricegap/LOC_Os02g41630 denotes PAL
T45010 400-403 http://identifiers.org/ricegap/LOC_Os11g48110 denotes PAL
T22448 865-868 http://identifiers.org/ricegap/LOC_Os05g35290 denotes PAL
T85518 865-868 http://identifiers.org/ricegap/LOC_Os02g41680 denotes PAL
T19565 865-868 http://identifiers.org/ricegap/LOC_Os02g41650 denotes PAL
T54361 865-868 http://identifiers.org/ricegap/LOC_Os02g41630 denotes PAL
T3833 865-868 http://identifiers.org/ricegap/LOC_Os11g48110 denotes PAL
T22345 901-906 http://identifiers.org/ricegap/LOC_Os02g34850 denotes small
T67953 1095-1122 http://identifiers.org/ricegap/LOC_Os11g48110 denotes phenylalanine ammonia-lyase
T13523 1095-1122 http://identifiers.org/ricegap/LOC_Os05g35290 denotes phenylalanine ammonia-lyase
T43937 1095-1122 http://identifiers.org/ricegap/LOC_Os02g41650 denotes phenylalanine ammonia-lyase
T28 1095-1122 http://identifiers.org/ricegap/LOC_Os02g41630 denotes phenylalanine ammonia-lyase
T89122 52-79 http://identifiers.org/rapdb.locus/Os11g0708900 denotes phenylalanine ammonia-lyase
T75464 52-79 http://identifiers.org/rapdb.locus/Os05g0427400 denotes phenylalanine ammonia-lyase
T40526 52-79 http://identifiers.org/rapdb.locus/Os02g0626400 denotes phenylalanine ammonia-lyase
T8730 52-79 http://identifiers.org/rapdb.locus/Os02g0626100 denotes phenylalanine ammonia-lyase
T81764 175-202 http://identifiers.org/rapdb.locus/Os11g0708900 denotes phenylalanine ammonia-lyase
T14609 175-202 http://identifiers.org/rapdb.locus/Os05g0427400 denotes phenylalanine ammonia-lyase
T89344 175-202 http://identifiers.org/rapdb.locus/Os02g0626400 denotes phenylalanine ammonia-lyase
T93213 175-202 http://identifiers.org/rapdb.locus/Os02g0626100 denotes phenylalanine ammonia-lyase
T47235 204-207 http://identifiers.org/rapdb.locus/Os05g0427400 denotes PAL
T42551 204-207 http://identifiers.org/rapdb.locus/Os02g0627100 denotes PAL
T17848 204-207 http://identifiers.org/rapdb.locus/Os02g0626400 denotes PAL
T57091 204-207 http://identifiers.org/rapdb.locus/Os02g0626100 denotes PAL
T24552 204-207 http://identifiers.org/rapdb.locus/Os11g0708900 denotes PAL
T68944 400-403 http://identifiers.org/rapdb.locus/Os05g0427400 denotes PAL
T18768 400-403 http://identifiers.org/rapdb.locus/Os02g0627100 denotes PAL
T68030 400-403 http://identifiers.org/rapdb.locus/Os02g0626400 denotes PAL
T99342 400-403 http://identifiers.org/rapdb.locus/Os02g0626100 denotes PAL
T61966 400-403 http://identifiers.org/rapdb.locus/Os11g0708900 denotes PAL
T66481 865-868 http://identifiers.org/rapdb.locus/Os05g0427400 denotes PAL
T37866 865-868 http://identifiers.org/rapdb.locus/Os02g0627100 denotes PAL
T59365 865-868 http://identifiers.org/rapdb.locus/Os02g0626400 denotes PAL
T59938 865-868 http://identifiers.org/rapdb.locus/Os02g0626100 denotes PAL
T21475 865-868 http://identifiers.org/rapdb.locus/Os11g0708900 denotes PAL
T92210 901-906 http://identifiers.org/rapdb.locus/Os02g0554000 denotes small
T74684 1095-1122 http://identifiers.org/rapdb.locus/Os11g0708900 denotes phenylalanine ammonia-lyase
T91284 1095-1122 http://identifiers.org/rapdb.locus/Os05g0427400 denotes phenylalanine ammonia-lyase
T66057 1095-1122 http://identifiers.org/rapdb.locus/Os02g0626400 denotes phenylalanine ammonia-lyase
T37012 1095-1122 http://identifiers.org/rapdb.locus/Os02g0626100 denotes phenylalanine ammonia-lyase
T88341 52-79 http://identifiers.org/uniprot/P14717 denotes phenylalanine ammonia-lyase
T14356 52-79 http://identifiers.org/uniprot/C5XXT9 denotes phenylalanine ammonia-lyase
T14267 52-79 http://identifiers.org/uniprot/B8AFQ7 denotes phenylalanine ammonia-lyase
T25978 175-202 http://identifiers.org/uniprot/P14717 denotes phenylalanine ammonia-lyase
T46651 175-202 http://identifiers.org/uniprot/C5XXT9 denotes phenylalanine ammonia-lyase
T59831 175-202 http://identifiers.org/uniprot/B8AFQ7 denotes phenylalanine ammonia-lyase
T31318 204-207 http://identifiers.org/uniprot/Q0DZE0 denotes PAL
T27367 204-207 http://identifiers.org/uniprot/P14717 denotes PAL
T67636 204-207 http://identifiers.org/uniprot/C5XXT9 denotes PAL
T74064 204-207 http://identifiers.org/uniprot/B8AFQ7 denotes PAL
T82640 204-207 http://identifiers.org/uniprot/A2Y4W6 denotes PAL
T46259 400-403 http://identifiers.org/uniprot/Q0DZE0 denotes PAL
T80478 400-403 http://identifiers.org/uniprot/P14717 denotes PAL
T13603 400-403 http://identifiers.org/uniprot/C5XXT9 denotes PAL
T57403 400-403 http://identifiers.org/uniprot/B8AFQ7 denotes PAL
T82045 400-403 http://identifiers.org/uniprot/A2Y4W6 denotes PAL
T397 865-868 http://identifiers.org/uniprot/Q0DZE0 denotes PAL
T46765 865-868 http://identifiers.org/uniprot/P14717 denotes PAL
T69124 865-868 http://identifiers.org/uniprot/C5XXT9 denotes PAL
T38013 865-868 http://identifiers.org/uniprot/B8AFQ7 denotes PAL
T36950 865-868 http://identifiers.org/uniprot/A2Y4W6 denotes PAL
T86603 1095-1122 http://identifiers.org/uniprot/P14717 denotes phenylalanine ammonia-lyase
T17103 1095-1122 http://identifiers.org/uniprot/C5XXT9 denotes phenylalanine ammonia-lyase
T60510 1095-1122 http://identifiers.org/uniprot/B8AFQ7 denotes phenylalanine ammonia-lyase
M_0 52-79 hunflair:NA:Gene denotes phenylalanine ammonia-lyase
M_1 175-202 hunflair:NA:Gene denotes phenylalanine ammonia-lyase
M_2 1095-1122 hunflair:NA:Gene denotes phenylalanine ammonia-lyase
M_3 66-73 hunflair:NA:Chemical denotes ammonia
M_4 189-196 hunflair:NA:Chemical denotes ammonia
M_5 1109-1116 hunflair:NA:Chemical denotes ammonia
M_6 318-328 hunflair:NA:Chemical denotes amino acid
M_7 351-361 hunflair:NA:Chemical denotes amino acid
M_8 85-89 hunflair:NA:Species denotes rice
M_9 212-216 hunflair:NA:Species denotes rice
M_10 877-881 hunflair:NA:Species denotes rice
M_11 1126-1130 hunflair:NA:Species denotes rice
M_12 204-207 hunflair:NA:Gene denotes PAL
M_13 400-403 hunflair:NA:Gene denotes PAL
M_14 865-868 hunflair:NA:Gene denotes PAL
M_15 52-65 hunflair:NA:Chemical denotes phenylalanine
M_16 175-188 hunflair:NA:Chemical denotes phenylalanine
M_17 1095-1108 hunflair:NA:Chemical denotes phenylalanine
M_18 409-427 hunflair:NA:Species denotes Phaseolus vulgaris

OryzaGP_2022

Id Subject Object Predicate Lexical cue
T1 52-79 http://identifiers.org/oryzabase.gene/18085 denotes phenylalanine ammonia-lyase
T2 52-79 http://identifiers.org/oryzabase.gene/671 denotes phenylalanine ammonia-lyase
T3 52-79 http://identifiers.org/oryzabase.gene/16695 denotes phenylalanine ammonia-lyase
T4 52-79 http://identifiers.org/oryzabase.gene/12547 denotes phenylalanine ammonia-lyase
T5 175-202 http://identifiers.org/oryzabase.gene/18085 denotes phenylalanine ammonia-lyase
T6 175-202 http://identifiers.org/oryzabase.gene/671 denotes phenylalanine ammonia-lyase
T7 175-202 http://identifiers.org/oryzabase.gene/16695 denotes phenylalanine ammonia-lyase
T8 175-202 http://identifiers.org/oryzabase.gene/12547 denotes phenylalanine ammonia-lyase
T9 620-621 http://identifiers.org/oryzabase.gene/11216 denotes 1
T10 1095-1122 http://identifiers.org/oryzabase.gene/18085 denotes phenylalanine ammonia-lyase
T11 1095-1122 http://identifiers.org/oryzabase.gene/671 denotes phenylalanine ammonia-lyase
T12 1095-1122 http://identifiers.org/oryzabase.gene/16695 denotes phenylalanine ammonia-lyase
T13 1095-1122 http://identifiers.org/oryzabase.gene/12547 denotes phenylalanine ammonia-lyase

OryzaGP_2021_v2

Id Subject Object Predicate Lexical cue
T1 204-207 http://identifiers.org/oryzabase.gene/671 denotes PAL
T2 204-207 http://identifiers.org/oryzabase.gene/6252 denotes PAL
T3 204-207 http://identifiers.org/oryzabase.gene/12547 denotes PAL
T4 204-207 http://identifiers.org/oryzabase.gene/10463 denotes PAL
T5 400-403 http://identifiers.org/oryzabase.gene/671 denotes PAL
T6 400-403 http://identifiers.org/oryzabase.gene/6252 denotes PAL
T7 400-403 http://identifiers.org/oryzabase.gene/12547 denotes PAL
T8 400-403 http://identifiers.org/oryzabase.gene/10463 denotes PAL
T9 740-742 http://identifiers.org/oryzabase.gene/20856 denotes GC
T10 865-868 http://identifiers.org/oryzabase.gene/671 denotes PAL
T11 865-868 http://identifiers.org/oryzabase.gene/6252 denotes PAL
T12 865-868 http://identifiers.org/oryzabase.gene/12547 denotes PAL
T13 865-868 http://identifiers.org/oryzabase.gene/10463 denotes PAL
T64793 204-207 http://identifiers.org/rapdb.locus/Os05g0427400 denotes PAL
T30783 204-207 http://identifiers.org/rapdb.locus/Os02g0627100 denotes PAL
T63571 204-207 http://identifiers.org/rapdb.locus/Os02g0626400 denotes PAL
T95018 204-207 http://identifiers.org/rapdb.locus/Os02g0626100 denotes PAL
T734 400-403 http://identifiers.org/rapdb.locus/Os05g0427400 denotes PAL
T65954 400-403 http://identifiers.org/rapdb.locus/Os02g0627100 denotes PAL
T98870 400-403 http://identifiers.org/rapdb.locus/Os02g0626400 denotes PAL
T11911 400-403 http://identifiers.org/rapdb.locus/Os02g0626100 denotes PAL
T46094 865-868 http://identifiers.org/rapdb.locus/Os05g0427400 denotes PAL
T52845 865-868 http://identifiers.org/rapdb.locus/Os02g0627100 denotes PAL
T80368 865-868 http://identifiers.org/rapdb.locus/Os02g0626400 denotes PAL
T65327 865-868 http://identifiers.org/rapdb.locus/Os02g0626100 denotes PAL

OryzaGP_2021_FLAIR

Id Subject Object Predicate Lexical cue
M_0 52-79 hunflair:NA:Gene denotes phenylalanine ammonia-lyase
M_1 175-202 hunflair:NA:Gene denotes phenylalanine ammonia-lyase
M_2 1095-1122 hunflair:NA:Gene denotes phenylalanine ammonia-lyase
M_3 66-73 hunflair:NA:Chemical denotes ammonia
M_4 189-196 hunflair:NA:Chemical denotes ammonia
M_5 1109-1116 hunflair:NA:Chemical denotes ammonia
M_6 318-328 hunflair:NA:Chemical denotes amino acid
M_7 351-361 hunflair:NA:Chemical denotes amino acid
M_8 85-89 hunflair:NA:Species denotes rice
M_9 212-216 hunflair:NA:Species denotes rice
M_10 877-881 hunflair:NA:Species denotes rice
M_11 1126-1130 hunflair:NA:Species denotes rice
M_12 204-207 hunflair:NA:Gene denotes PAL
M_13 400-403 hunflair:NA:Gene denotes PAL
M_14 865-868 hunflair:NA:Gene denotes PAL
M_15 52-65 hunflair:NA:Chemical denotes phenylalanine
M_16 175-188 hunflair:NA:Chemical denotes phenylalanine
M_17 1095-1108 hunflair:NA:Chemical denotes phenylalanine
M_18 409-427 hunflair:NA:Species denotes Phaseolus vulgaris

Oryza_sentences

Id Subject Object Predicate Lexical cue
T1 0-97 Sentence denotes Structure and some characterization of the gene for phenylalanine ammonia-lyase from rice plants.
T2 98-279 Sentence denotes A nearly full-length cDNA and a genomic clone were isolated that encoded the phenylalanine ammonia-lyase (PAL) of rice plants, and the complete nucleotide sequences were determined.
T3 280-338 Sentence denotes The gene encodes a polypeptide of 701 amino acid residues.
T4 339-469 Sentence denotes The deduced amino acid sequence is highly similar to that of PAL from Phaseolus vulgaris deduced from an incomplete cDNA fragment.
T5 470-541 Sentence denotes The cloned gene spans 4412 bp and consists of two exons and one intron.
T6 542-703 Sentence denotes The site of initiation of transcription was located -86 nucleotides (position 1) upstream from the translational initiation codon by the primer-extension method.
T7 704-825 Sentence denotes Sequences analogous to TATA-box and GC-box were found in the 5'-upstream region from the transcriptional initiation site.
T8 826-925 Sentence denotes Southern blot analysis showed that the PAL gene of rice plants exists as a small multi-gene family.
T9 926-1023 Sentence denotes Within this family, the genomic clone isolated in this study was shown to be responsive by light.
T10 1024-1146 Sentence denotes This also indicated that this genomic sequence functions as a gene for phenylalanine ammonia-lyase in rice plants in vivo.