PubMed:27930654 / 970-1244
Annnotations
LitCoin-entities
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| 11806 | 154-161 | GeneOrGeneProduct | denotes | FAM-161 | NCBIGene:189695 |
| 11807 | 163-170 | GeneOrGeneProduct | denotes | FAM161A | NCBIGene:84140 |
| 11808 | 184-192 | GeneOrGeneProduct | denotes | CCDC-104 | NCBIGene:112942 |
| 11809 | 194-201 | GeneOrGeneProduct | denotes | CCDC104 | NCBIGene:112942 |
| 11810 | 208-213 | GeneOrGeneProduct | denotes | RPI-1 | NCBIGene:189281 |
| 11811 | 215-218 | GeneOrGeneProduct | denotes | RP1 | NCBIGene:6101 |
| 11812 | 219-224 | GeneOrGeneProduct | denotes | RP1L1 | NCBIGene:94137 |
LitCoin-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T6 | 0-274 | Sentence | denotes | Using whole-organism RNA-Seq libraries, we discovered a signature expression profile highly enriched for transcripts of known ciliary proteins, including FAM-161 (FAM161A orthologue), CCDC-104 (CCDC104), and RPI-1 (RP1/RP1L1), which we confirm are cilium-localised in worms. |
LitCoin-entities-OrganismTaxon-PD
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T3 | 215-218 | OrganismTaxon | denotes | RP1 | NCBItxid:2670 |
LitCoin-GeneOrGeneProduct-v0
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T27 | 85-91 | GeneOrGeneProduct | denotes | highly |
| T28 | 105-116 | GeneOrGeneProduct | denotes | transcripts |
| T29 | 126-142 | GeneOrGeneProduct | denotes | ciliary proteins |
| T30 | 163-170 | GeneOrGeneProduct | denotes | FAM161A |
| T31 | 184-192 | GeneOrGeneProduct | denotes | CCDC-104 |
| T32 | 194-201 | GeneOrGeneProduct | denotes | CCDC104 |
| T33 | 208-213 | GeneOrGeneProduct | denotes | RPI-1 |
| T34 | 219-224 | GeneOrGeneProduct | denotes | RP1L1 |
LitCoin-GeneOrGeneProduct-v2
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T17 | 126-142 | GeneOrGeneProduct | denotes | ciliary proteins |
| T18 | 163-170 | GeneOrGeneProduct | denotes | FAM161A |
| T19 | 184-192 | GeneOrGeneProduct | denotes | CCDC-104 |
| T20 | 194-201 | GeneOrGeneProduct | denotes | CCDC104 |
| T21 | 208-213 | GeneOrGeneProduct | denotes | RPI-1 |
| T22 | 219-224 | GeneOrGeneProduct | denotes | RP1L1 |
LitCoin-NCBITaxon-2
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T4 | 215-218 | OrganismTaxon | denotes | RP1 |
LitCoin-GeneOrGeneProduct-v3
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T11 | 163-170 | GeneOrGeneProduct | denotes | FAM161A |
| T12 | 184-192 | GeneOrGeneProduct | denotes | CCDC-104 |
| T13 | 194-201 | GeneOrGeneProduct | denotes | CCDC104 |
| T14 | 208-213 | GeneOrGeneProduct | denotes | RPI-1 |
| T15 | 219-224 | GeneOrGeneProduct | denotes | RP1L1 |
LitCoin_Mondo_095
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T12 | 215-218 | DiseaseOrPhenotypicFeature | denotes | RP1 | 0008377 |
LitCoin-training-merged
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T15 | 219-224 | GeneOrGeneProduct | denotes | RP1L1 |
| T14 | 208-213 | GeneOrGeneProduct | denotes | RPI-1 |
| T13 | 194-201 | GeneOrGeneProduct | denotes | CCDC104 |
| T12 | 184-192 | GeneOrGeneProduct | denotes | CCDC-104 |
| T91349 | 163-170 | GeneOrGeneProduct | denotes | FAM161A |
| T23564 | 215-218 | OrganismTaxon | denotes | RP1 |