PubMed:27502283
Annnotations
pqqtest_sentence
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| M_0 | 475-486 | cand:TO:0000138-brown rice protein | denotes | rice enzyme |
| M_1 | 475-486 | cand:TO:0000246-rice delphacid resistance | denotes | rice enzyme |
| M_2 | 475-486 | cand:TO:0000144-milled rice yield | denotes | rice enzyme |
| M_3 | 475-486 | cand:TO:0000410-polished rice protein content | denotes | rice enzyme |
| M_4 | 475-486 | cand:TO:0000204-rice seedling blight disease resistance | denotes | rice enzyme |
| M_5 | 475-486 | cand:TO:0000147-rice hoja blanca disease resistance | denotes | rice enzyme |
| M_6 | 475-486 | cand:PO:0000226-rib zone | denotes | rice enzyme |
| M_7 | 475-486 | cand:PO:0009064-receptacle | denotes | rice enzyme |
| M_8 | 475-486 | cand:PO:0000282-trichome | denotes | rice enzyme |
| M_9 | 475-486 | cand:PO:0005427-sclerenchyma | denotes | rice enzyme |
| M_10 | 475-486 | cand:PO:0030050-stereome | denotes | rice enzyme |
| M_11 | 507-538 | cand:PO:0025578-collective phyllome structure development stage | denotes | physical/functional interaction |
| M_12 | 507-538 | cand:PO:0025269-collective organ part structure | denotes | physical/functional interaction |
| M_13 | 507-538 | cand:TO:0000845-collective phyllome structure morphology trait | denotes | physical/functional interaction |
| M_14 | 507-538 | cand:PPO:0002025-reproductive structure presence | denotes | physical/functional interaction |
| M_15 | 507-538 | cand:PPO:0000009-depends on structure | denotes | physical/functional interaction |
| M_16 | 507-538 | cand:TO:0000096-ratooning ability | denotes | physical/functional interaction |
| M_17 | 507-538 | cand:TO:0000513-potassium concentration | denotes | physical/functional interaction |
| M_18 | 507-538 | cand:TO:0006045-phosphorus concentration | denotes | physical/functional interaction |
| M_19 | 507-538 | cand:TO:0006053-zinc concentration | denotes | physical/functional interaction |
| M_20 | 507-538 | cand:TO:0006050-cobalt concentration | denotes | physical/functional interaction |
| M_21 | 507-538 | cand:PO:0000244-functional megaspore | denotes | physical/functional interaction |
| M_22 | 488-494 | GeneID:RAPID:Os03g0758100MSUID:LOC_Os03g55090 | denotes | OsPho1 |
| T20580 | 168-184 | xzyao:18974 | denotes | Starch synthesis |
| T46685 | 354-370 | xzyao:18974 | denotes | starch synthesis |
| T10147 | 195-200 | funRiceGene:91 | denotes | grain |
| T92573 | 651-661 | xzyao:31834 | denotes | L80 region |
| T75293 | 475-486 | xzyao:29878 | denotes | rice enzyme |
| T13868 | 396-410 | xzyao:14618 | denotes | starch granule |
| T19179 | 0-21 | xzyao:36028 | denotes | Rice Endosperm Starch |
| T20238 | 1148-1161 | xzyao:38936 | denotes | seed extracts |
| T95495 | 1033-1037 | PO:0009010, funRiceGene:180 | denotes | seed |
| T50215 | 1148-1152 | PO:0009010, funRiceGene:180 | denotes | seed |
| T72931 | 683-695 | xzyao:24527 | denotes | higher plant |
| T1578 | 270-301 | xzyao:42168 | denotes | starch plastidial phosphorylase |
| T76250 | 5-21 | xzyao:32001 | denotes | Endosperm Starch |
| T97076 | 1143-1152 | xzyao:29448 | denotes | rice seed |
| T77386 | 15-35 | xzyao:28 | denotes | Starch Phosphorylase |
| T40311 | 425-435 | xzyao:5497 | denotes | rice seeds |
| T87972 | 15-21 | funRiceGene:143 | denotes | Starch |
| T43965 | 168-174 | funRiceGene:143 | denotes | Starch |
| T40816 | 270-276 | funRiceGene:143 | denotes | starch |
| T36142 | 354-360 | funRiceGene:143 | denotes | starch |
| T37413 | 396-402 | funRiceGene:143 | denotes | starch |
| T61277 | 550-556 | funRiceGene:143 | denotes | starch |
| T96959 | 277-301 | xzyao:26909 | denotes | plastidial phosphorylase |
| M_23 | 0-14 | xzyao:39115 | denotes | Rice Endosperm |
| M_24 | 5-14 | PO:0009089, funRiceGene:253 | denotes | Endosperm |
| M_25 | 201-210 | PO:0009089, funRiceGene:253 | denotes | endosperm |
| M_26 | 696-710 | hunflair:NA:Gene | denotes | phosphorylases |
| M_27 | 144-166 | hunflair:NA:Chemical | denotes | Malto-oligosaccharides |
| M_28 | 85-89 | hunflair:NA:Gene | denotes | Dpe1 |
| M_29 | 0-35 | hunflair:NA:Gene | denotes | Rice Endosperm Starch Phosphorylase |
| M_30 | 1261-1282 | hunflair:NA:Chemical | denotes | maltooligosaccharides |
| M_31 | 748-754 | hunflair:NA:Gene | denotes | OsDpe1 |
| M_32 | 800-806 | hunflair:NA:Gene | denotes | OsDpe1 |
| M_33 | 1174-1180 | hunflair:NA:Gene | denotes | OsDpe1 |
| M_34 | 1411-1417 | hunflair:NA:Gene | denotes | OsDpe1 |
| M_35 | 1167-1180 | hunflair:NA:Gene | denotes | OsPho1-OsDpe1 |
| M_36 | 488-494 | hunflair:NA:Gene | denotes | OsPho1 |
| M_37 | 612-618 | hunflair:NA:Gene | denotes | OsPho1 |
| M_38 | 630-636 | hunflair:NA:Gene | denotes | OsPho1 |
| M_39 | 1167-1173 | hunflair:NA:Gene | denotes | OsPho1 |
| M_40 | 1366-1372 | hunflair:NA:Gene | denotes | OsPho1 |
| M_41 | 1426-1432 | hunflair:NA:Gene | denotes | OsPho1 |
| M_42 | 0-4 | hunflair:NA:Species | denotes | Rice |
| M_43 | 1506-1512 | hunflair:NA:Chemical | denotes | sugars |
| M_44 | 188-194 | hunflair:NA:Species | denotes | cereal |
| M_45 | 425-429 | hunflair:NA:Species | denotes | rice |
| M_46 | 475-479 | hunflair:NA:Species | denotes | rice |
| M_47 | 1143-1147 | hunflair:NA:Species | denotes | rice |
| M_48 | 270-301 | hunflair:NA:Gene | denotes | starch plastidial phosphorylase |
| M_49 | 37-41 | hunflair:NA:Gene | denotes | Pho1 |
| M_50 | 303-307 | hunflair:NA:Gene | denotes | Pho1 |
| M_51 | 690-695 | hunflair:NA:Species | denotes | plant |
| M_52 | 1506-1512 | pubtator:MESH:D002241:Chemical | denotes | sugars |
| M_53 | 425-429 | pubtator:4530:Species | denotes | rice |
| M_54 | 475-479 | pubtator:4530:Species | denotes | rice |
| M_55 | 1143-1147 | pubtator:4530:Species | denotes | rice |
| M_56 | 0-4 | pubtator:4530:Species | denotes | Rice |
21k_plant_trait_mention
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| M_0 | 168-174 | funRiceGene:143 | denotes | Starch |
| M_1 | 270-276 | funRiceGene:143 | denotes | starch |
| M_2 | 354-360 | funRiceGene:143 | denotes | starch |
| M_3 | 396-402 | funRiceGene:143 | denotes | starch |
| M_4 | 550-556 | funRiceGene:143 | denotes | starch |
| M_5 | 195-200 | funRiceGene:91 | denotes | grain |
| M_6 | 201-210 | PO:0009089, funRiceGene:253 | denotes | endosperm |
| M_7 | 1033-1037 | PO:0009010, funRiceGene:180 | denotes | seed |
| M_8 | 1148-1152 | PO:0009010, funRiceGene:180 | denotes | seed |
| M_9 | 690-695 | hunflair:NA:Species | denotes | plant |
| M_10 | 188-194 | hunflair:NA:Species | denotes | cereal |
| M_11 | 270-301 | hunflair:NA:Gene | denotes | starch plastidial phosphorylase |
| M_12 | 425-429 | hunflair:NA:Species | denotes | rice |
| M_13 | 475-479 | hunflair:NA:Species | denotes | rice |
| M_14 | 1143-1147 | hunflair:NA:Species | denotes | rice |
| M_15 | 1261-1282 | hunflair:NA:Chemical | denotes | maltooligosaccharides |
| M_16 | 488-494 | hunflair:NA:Gene | denotes | OsPho1 |
| M_17 | 612-618 | hunflair:NA:Gene | denotes | OsPho1 |
| M_18 | 630-636 | hunflair:NA:Gene | denotes | OsPho1 |
| M_19 | 1167-1173 | hunflair:NA:Gene | denotes | OsPho1 |
| M_20 | 1366-1372 | hunflair:NA:Gene | denotes | OsPho1 |
| M_21 | 1426-1432 | hunflair:NA:Gene | denotes | OsPho1 |
| M_22 | 748-754 | hunflair:NA:Gene | denotes | OsDpe1 |
| M_23 | 800-806 | hunflair:NA:Gene | denotes | OsDpe1 |
| M_24 | 1174-1180 | hunflair:NA:Gene | denotes | OsDpe1 |
| M_25 | 1411-1417 | hunflair:NA:Gene | denotes | OsDpe1 |
| M_26 | 696-710 | hunflair:NA:Gene | denotes | phosphorylases |
| M_27 | 1167-1180 | hunflair:NA:Gene | denotes | OsPho1-OsDpe1 |
| M_28 | 37-41 | hunflair:NA:Gene | denotes | Pho1 |
| M_29 | 303-307 | hunflair:NA:Gene | denotes | Pho1 |
| M_30 | 0-4 | hunflair:NA:Species | denotes | Rice |
| M_31 | 144-166 | hunflair:NA:Chemical | denotes | Malto-oligosaccharides |
| M_32 | 0-35 | hunflair:NA:Gene | denotes | Rice Endosperm Starch Phosphorylase |
| M_33 | 1506-1512 | hunflair:NA:Chemical | denotes | sugars |
| M_34 | 85-89 | hunflair:NA:Gene | denotes | Dpe1 |
| M_35 | 0-4 | pubtator:4530:Species | denotes | Rice |
| M_36 | 425-429 | pubtator:4530:Species | denotes | rice |
| M_37 | 475-479 | pubtator:4530:Species | denotes | rice |
| M_38 | 1143-1147 | pubtator:4530:Species | denotes | rice |
| M_39 | 1506-1512 | pubtator:MESH:D002241:Chemical | denotes | sugars |
OryzaGP_2021
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 37-41 | http://identifiers.org/oryzabase.gene/11812 | denotes | Pho1 |
| T2 | 85-89 | http://identifiers.org/oryzabase.gene/21327 | denotes | Dpe1 |
| T3 | 303-307 | http://identifiers.org/oryzabase.gene/11812 | denotes | Pho1 |
| T4 | 488-494 | http://identifiers.org/oryzabase.gene/11812 | denotes | OsPho1 |
| T5 | 612-618 | http://identifiers.org/oryzabase.gene/11812 | denotes | OsPho1 |
| T6 | 630-636 | http://identifiers.org/oryzabase.gene/11812 | denotes | OsPho1 |
| T7 | 748-754 | http://identifiers.org/oryzabase.gene/21327 | denotes | OsDpe1 |
| T8 | 800-806 | http://identifiers.org/oryzabase.gene/21327 | denotes | OsDpe1 |
| T9 | 1167-1173 | http://identifiers.org/oryzabase.gene/11812 | denotes | OsPho1 |
| T10 | 1174-1180 | http://identifiers.org/oryzabase.gene/21327 | denotes | OsDpe1 |
| T11 | 1366-1372 | http://identifiers.org/oryzabase.gene/11812 | denotes | OsPho1 |
| T12 | 1411-1417 | http://identifiers.org/oryzabase.gene/21327 | denotes | OsDpe1 |
| T13 | 1426-1432 | http://identifiers.org/oryzabase.gene/11812 | denotes | OsPho1 |
| T14 | 1495-1497 | http://identifiers.org/oryzabase.gene/811 | denotes | G1 |
| T82685 | 37-41 | http://identifiers.org/ricegap/LOC_Os03g55090 | denotes | Pho1 |
| T5819 | 85-89 | http://identifiers.org/ricegap/LOC_Os07g43390 | denotes | Dpe1 |
| T43069 | 303-307 | http://identifiers.org/ricegap/LOC_Os03g55090 | denotes | Pho1 |
| T23687 | 488-494 | http://identifiers.org/ricegap/LOC_Os03g55090 | denotes | OsPho1 |
| T90485 | 612-618 | http://identifiers.org/ricegap/LOC_Os03g55090 | denotes | OsPho1 |
| T10218 | 630-636 | http://identifiers.org/ricegap/LOC_Os03g55090 | denotes | OsPho1 |
| T58692 | 748-754 | http://identifiers.org/ricegap/LOC_Os07g43390 | denotes | OsDpe1 |
| T40698 | 800-806 | http://identifiers.org/ricegap/LOC_Os07g43390 | denotes | OsDpe1 |
| T52289 | 1167-1173 | http://identifiers.org/ricegap/LOC_Os03g55090 | denotes | OsPho1 |
| T84057 | 1174-1180 | http://identifiers.org/ricegap/LOC_Os07g43390 | denotes | OsDpe1 |
| T54531 | 1366-1372 | http://identifiers.org/ricegap/LOC_Os03g55090 | denotes | OsPho1 |
| T88818 | 1411-1417 | http://identifiers.org/ricegap/LOC_Os07g43390 | denotes | OsDpe1 |
| T87175 | 1426-1432 | http://identifiers.org/ricegap/LOC_Os03g55090 | denotes | OsPho1 |
| T31395 | 1495-1497 | http://identifiers.org/ricegap/LOC_Os07g04670 | denotes | G1 |
| T87719 | 37-41 | http://identifiers.org/rapdb.locus/Os03g0758100 | denotes | Pho1 |
| T42028 | 85-89 | http://identifiers.org/rapdb.locus/Os07g0627000 | denotes | Dpe1 |
| T28565 | 303-307 | http://identifiers.org/rapdb.locus/Os03g0758100 | denotes | Pho1 |
| T68854 | 488-494 | http://identifiers.org/rapdb.locus/Os03g0758100 | denotes | OsPho1 |
| T75806 | 612-618 | http://identifiers.org/rapdb.locus/Os03g0758100 | denotes | OsPho1 |
| T35022 | 630-636 | http://identifiers.org/rapdb.locus/Os03g0758100 | denotes | OsPho1 |
| T75324 | 748-754 | http://identifiers.org/rapdb.locus/Os07g0627000 | denotes | OsDpe1 |
| T30975 | 800-806 | http://identifiers.org/rapdb.locus/Os07g0627000 | denotes | OsDpe1 |
| T85499 | 1167-1173 | http://identifiers.org/rapdb.locus/Os03g0758100 | denotes | OsPho1 |
| T19630 | 1174-1180 | http://identifiers.org/rapdb.locus/Os07g0627000 | denotes | OsDpe1 |
| T78993 | 1366-1372 | http://identifiers.org/rapdb.locus/Os03g0758100 | denotes | OsPho1 |
| T92461 | 1411-1417 | http://identifiers.org/rapdb.locus/Os07g0627000 | denotes | OsDpe1 |
| T27114 | 1426-1432 | http://identifiers.org/rapdb.locus/Os03g0758100 | denotes | OsPho1 |
| T14386 | 1495-1497 | http://identifiers.org/rapdb.locus/Os07g0139300 | denotes | G1 |
| T33328 | 37-41 | http://identifiers.org/uniprot/B3IYE3 | denotes | Pho1 |
| T69123 | 85-89 | http://identifiers.org/uniprot/Q8LI30 | denotes | Dpe1 |
| T83305 | 303-307 | http://identifiers.org/uniprot/B3IYE3 | denotes | Pho1 |
| T80126 | 488-494 | http://identifiers.org/uniprot/B3IYE3 | denotes | OsPho1 |
| T91817 | 612-618 | http://identifiers.org/uniprot/B3IYE3 | denotes | OsPho1 |
| T59889 | 630-636 | http://identifiers.org/uniprot/B3IYE3 | denotes | OsPho1 |
| T12951 | 748-754 | http://identifiers.org/uniprot/Q8LI30 | denotes | OsDpe1 |
| T40771 | 800-806 | http://identifiers.org/uniprot/Q8LI30 | denotes | OsDpe1 |
| T63666 | 1167-1173 | http://identifiers.org/uniprot/B3IYE3 | denotes | OsPho1 |
| T44336 | 1174-1180 | http://identifiers.org/uniprot/Q8LI30 | denotes | OsDpe1 |
| T36149 | 1366-1372 | http://identifiers.org/uniprot/B3IYE3 | denotes | OsPho1 |
| T69848 | 1411-1417 | http://identifiers.org/uniprot/Q8LI30 | denotes | OsDpe1 |
| T73990 | 1426-1432 | http://identifiers.org/uniprot/B3IYE3 | denotes | OsPho1 |
| T60444 | 1495-1497 | http://identifiers.org/uniprot/Q8GVZ6 | denotes | G1 |
| M_0 | 0-35 | hunflair:NA:Gene | denotes | Rice Endosperm Starch Phosphorylase |
| M_1 | 0-4 | hunflair:NA:Species | denotes | Rice |
| M_2 | 37-41 | hunflair:NA:Gene | denotes | Pho1 |
| M_3 | 303-307 | hunflair:NA:Gene | denotes | Pho1 |
| M_4 | 144-166 | hunflair:NA:Chemical | denotes | Malto-oligosaccharides |
| M_5 | 690-695 | hunflair:NA:Species | denotes | plant |
| M_6 | 1506-1512 | hunflair:NA:Chemical | denotes | sugars |
| M_7 | 425-429 | hunflair:NA:Species | denotes | rice |
| M_8 | 475-479 | hunflair:NA:Species | denotes | rice |
| M_9 | 1143-1147 | hunflair:NA:Species | denotes | rice |
| M_10 | 85-89 | hunflair:NA:Gene | denotes | Dpe1 |
| M_11 | 1261-1282 | hunflair:NA:Chemical | denotes | maltooligosaccharides |
| M_12 | 270-301 | hunflair:NA:Gene | denotes | starch plastidial phosphorylase |
| M_13 | 1167-1180 | hunflair:NA:Gene | denotes | OsPho1-OsDpe1 |
| M_14 | 748-754 | hunflair:NA:Gene | denotes | OsDpe1 |
| M_15 | 800-806 | hunflair:NA:Gene | denotes | OsDpe1 |
| M_16 | 1174-1180 | hunflair:NA:Gene | denotes | OsDpe1 |
| M_17 | 1411-1417 | hunflair:NA:Gene | denotes | OsDpe1 |
| M_18 | 696-710 | hunflair:NA:Gene | denotes | phosphorylases |
| M_19 | 488-494 | hunflair:NA:Gene | denotes | OsPho1 |
| M_20 | 612-618 | hunflair:NA:Gene | denotes | OsPho1 |
| M_21 | 630-636 | hunflair:NA:Gene | denotes | OsPho1 |
| M_22 | 1167-1173 | hunflair:NA:Gene | denotes | OsPho1 |
| M_23 | 1366-1372 | hunflair:NA:Gene | denotes | OsPho1 |
| M_24 | 1426-1432 | hunflair:NA:Gene | denotes | OsPho1 |
| M_25 | 188-194 | hunflair:NA:Species | denotes | cereal |
OryzaGP_2022
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 959-960 | http://identifiers.org/oryzabase.gene/11216 | denotes | 1 |
| T2 | 961-962 | http://identifiers.org/oryzabase.gene/11216 | denotes | 1 |
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-167 | Sentence | denotes | Rice Endosperm Starch Phosphorylase (Pho1) Assembles with Disproportionating Enzyme (Dpe1) to Form a Protein Complex That Enhances Synthesis of Malto-oligosaccharides. |
| T2 | 168-265 | Sentence | denotes | Starch synthesis in cereal grain endosperm is dependent on the concerted actions of many enzymes. |
| T3 | 266-436 | Sentence | denotes | The starch plastidial phosphorylase (Pho1) plays an important role in the initiation of starch synthesis and in the maturation of starch granule in developing rice seeds. |
| T4 | 437-578 | Sentence | denotes | Prior evidence has suggested that the rice enzyme, OsPho1, may have a physical/functional interaction with other starch biosynthetic enzymes. |
| T5 | 579-756 | Sentence | denotes | Pulldown experiments showed that OsPho1 as well as OsPho1 devoid of its L80 region, a peptide unique to higher plant phosphorylases, captures disproportionating enzyme (OsDpe1). |
| T6 | 757-894 | Sentence | denotes | Interaction of the latter enzyme form with OsDpe1 indicates that the putative regulatory L80 is not responsible for multienzyme assembly. |
| T7 | 895-1162 | Sentence | denotes | This heterotypic enzyme complex, determined at a molar ratio of 1:1, was validated by reciprocal co-immunoprecipitation studies of native seed proteins and by co-elution chromatographic and co-migration electrophoretic patterns of these enzymes in rice seed extracts. |
| T8 | 1163-1382 | Sentence | denotes | The OsPho1-OsDpe1 complex utilized a broader range of substrates for enhanced synthesis of larger maltooligosaccharides than each individual enzyme and significantly elevated the substrate affinities of OsPho1 at 30 °C. |
| T9 | 1383-1546 | Sentence | denotes | Moreover, the assembly with OsDpe1 enables OsPho1 to utilize products of transglycosylation reactions involving G1 and G3, sugars that it cannot catalyze directly. |
Glycosmos6-MAT
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 5-14 | http://purl.obolibrary.org/obo/MAT_0000227 | denotes | Endosperm |
| T2 | 201-210 | http://purl.obolibrary.org/obo/MAT_0000227 | denotes | endosperm |
OryzaGP_2021_v2
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 37-41 | http://identifiers.org/oryzabase.gene/11812 | denotes | Pho1 |
| T2 | 85-89 | http://identifiers.org/oryzabase.gene/21327 | denotes | Dpe1 |
| T3 | 303-307 | http://identifiers.org/oryzabase.gene/11812 | denotes | Pho1 |
| T4 | 488-494 | http://identifiers.org/oryzabase.gene/11812 | denotes | OsPho1 |
| T5 | 612-618 | http://identifiers.org/oryzabase.gene/11812 | denotes | OsPho1 |
| T6 | 630-636 | http://identifiers.org/oryzabase.gene/11812 | denotes | OsPho1 |
| T7 | 748-754 | http://identifiers.org/oryzabase.gene/21327 | denotes | OsDpe1 |
| T8 | 800-806 | http://identifiers.org/oryzabase.gene/21327 | denotes | OsDpe1 |
| T9 | 1167-1173 | http://identifiers.org/oryzabase.gene/11812 | denotes | OsPho1 |
| T10 | 1174-1180 | http://identifiers.org/oryzabase.gene/21327 | denotes | OsDpe1 |
| T11 | 1366-1372 | http://identifiers.org/oryzabase.gene/11812 | denotes | OsPho1 |
| T12 | 1411-1417 | http://identifiers.org/oryzabase.gene/21327 | denotes | OsDpe1 |
| T13 | 1426-1432 | http://identifiers.org/oryzabase.gene/11812 | denotes | OsPho1 |
| T14 | 1495-1497 | http://identifiers.org/oryzabase.gene/811 | denotes | G1 |
| T29188 | 37-41 | http://identifiers.org/rapdb.locus/Os03g0758100 | denotes | Pho1 |
| T18773 | 85-89 | http://identifiers.org/rapdb.locus/Os07g0627000 | denotes | Dpe1 |
| T27566 | 303-307 | http://identifiers.org/rapdb.locus/Os03g0758100 | denotes | Pho1 |
| T2766 | 488-494 | http://identifiers.org/rapdb.locus/Os03g0758100 | denotes | OsPho1 |
| T57849 | 612-618 | http://identifiers.org/rapdb.locus/Os03g0758100 | denotes | OsPho1 |
| T69809 | 630-636 | http://identifiers.org/rapdb.locus/Os03g0758100 | denotes | OsPho1 |
| T77106 | 748-754 | http://identifiers.org/rapdb.locus/Os07g0627000 | denotes | OsDpe1 |
| T42104 | 800-806 | http://identifiers.org/rapdb.locus/Os07g0627000 | denotes | OsDpe1 |
| T65292 | 1167-1173 | http://identifiers.org/rapdb.locus/Os03g0758100 | denotes | OsPho1 |
| T482 | 1174-1180 | http://identifiers.org/rapdb.locus/Os07g0627000 | denotes | OsDpe1 |
| T44442 | 1366-1372 | http://identifiers.org/rapdb.locus/Os03g0758100 | denotes | OsPho1 |
| T76496 | 1411-1417 | http://identifiers.org/rapdb.locus/Os07g0627000 | denotes | OsDpe1 |
| T94676 | 1426-1432 | http://identifiers.org/rapdb.locus/Os03g0758100 | denotes | OsPho1 |
| T56884 | 1495-1497 | http://identifiers.org/rapdb.locus/Os07g0139300 | denotes | G1 |
OryzaGP_2021_FLAIR
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| M_0 | 0-35 | hunflair:NA:Gene | denotes | Rice Endosperm Starch Phosphorylase |
| M_1 | 0-4 | hunflair:NA:Species | denotes | Rice |
| M_2 | 37-41 | hunflair:NA:Gene | denotes | Pho1 |
| M_3 | 303-307 | hunflair:NA:Gene | denotes | Pho1 |
| M_4 | 144-166 | hunflair:NA:Chemical | denotes | Malto-oligosaccharides |
| M_5 | 690-695 | hunflair:NA:Species | denotes | plant |
| M_6 | 1506-1512 | hunflair:NA:Chemical | denotes | sugars |
| M_7 | 425-429 | hunflair:NA:Species | denotes | rice |
| M_8 | 475-479 | hunflair:NA:Species | denotes | rice |
| M_9 | 1143-1147 | hunflair:NA:Species | denotes | rice |
| M_10 | 85-89 | hunflair:NA:Gene | denotes | Dpe1 |
| M_11 | 1261-1282 | hunflair:NA:Chemical | denotes | maltooligosaccharides |
| M_12 | 270-301 | hunflair:NA:Gene | denotes | starch plastidial phosphorylase |
| M_13 | 1167-1180 | hunflair:NA:Gene | denotes | OsPho1-OsDpe1 |
| M_14 | 748-754 | hunflair:NA:Gene | denotes | OsDpe1 |
| M_15 | 800-806 | hunflair:NA:Gene | denotes | OsDpe1 |
| M_16 | 1174-1180 | hunflair:NA:Gene | denotes | OsDpe1 |
| M_17 | 1411-1417 | hunflair:NA:Gene | denotes | OsDpe1 |
| M_18 | 696-710 | hunflair:NA:Gene | denotes | phosphorylases |
| M_19 | 488-494 | hunflair:NA:Gene | denotes | OsPho1 |
| M_20 | 612-618 | hunflair:NA:Gene | denotes | OsPho1 |
| M_21 | 630-636 | hunflair:NA:Gene | denotes | OsPho1 |
| M_22 | 1167-1173 | hunflair:NA:Gene | denotes | OsPho1 |
| M_23 | 1366-1372 | hunflair:NA:Gene | denotes | OsPho1 |
| M_24 | 1426-1432 | hunflair:NA:Gene | denotes | OsPho1 |
| M_25 | 188-194 | hunflair:NA:Species | denotes | cereal |
OryzaGP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 303-307 | gene | denotes | Pho1 |
| T2 | 488-494 | gene | denotes | OsPho1 |
| T3 | 612-618 | gene | denotes | OsPho1 |
| T4 | 630-636 | gene | denotes | OsPho1 |
| T5 | 748-754 | gene | denotes | OsDpe1 |
| T6 | 1167-1173 | gene | denotes | OsPho1 |
| T7 | 1174-1180 | gene | denotes | OsDpe1 |
| T8 | 1366-1372 | gene | denotes | OsPho1 |
Oryza_sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-167 | Sentence | denotes | Rice Endosperm Starch Phosphorylase (Pho1) Assembles with Disproportionating Enzyme (Dpe1) to Form a Protein Complex That Enhances Synthesis of Malto-oligosaccharides. |
| T2 | 168-265 | Sentence | denotes | Starch synthesis in cereal grain endosperm is dependent on the concerted actions of many enzymes. |
| T3 | 266-436 | Sentence | denotes | The starch plastidial phosphorylase (Pho1) plays an important role in the initiation of starch synthesis and in the maturation of starch granule in developing rice seeds. |
| T4 | 437-578 | Sentence | denotes | Prior evidence has suggested that the rice enzyme, OsPho1, may have a physical/functional interaction with other starch biosynthetic enzymes. |
| T5 | 579-756 | Sentence | denotes | Pulldown experiments showed that OsPho1 as well as OsPho1 devoid of its L80 region, a peptide unique to higher plant phosphorylases, captures disproportionating enzyme (OsDpe1). |
| T6 | 757-894 | Sentence | denotes | Interaction of the latter enzyme form with OsDpe1 indicates that the putative regulatory L80 is not responsible for multienzyme assembly. |
| T7 | 895-1162 | Sentence | denotes | This heterotypic enzyme complex, determined at a molar ratio of 1:1, was validated by reciprocal co-immunoprecipitation studies of native seed proteins and by co-elution chromatographic and co-migration electrophoretic patterns of these enzymes in rice seed extracts. |
| T8 | 1163-1546 | Sentence | denotes | The OsPho1-OsDpe1 complex utilized a broader range of substrates for enhanced synthesis of larger maltooligosaccharides than each individual enzyme and significantly elevated the substrate affinities of OsPho1 at 30 °C. Moreover, the assembly with OsDpe1 enables OsPho1 to utilize products of transglycosylation reactions involving G1 and G3, sugars that it cannot catalyze directly. |
NCBITAXON
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T1 | 0-4 | OrganismTaxon | denotes | Rice | 4530 |
| T2 | 425-429 | OrganismTaxon | denotes | rice | 4530 |
| T3 | 475-479 | OrganismTaxon | denotes | rice | 4530 |
| T4 | 683-695 | OrganismTaxon | denotes | higher plant | 3193 |
| T5 | 1143-1147 | OrganismTaxon | denotes | rice | 4530 |
Anatomy-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T1 | 944-949 | Body_part | denotes | molar | http://purl.obolibrary.org/obo/UBERON_0003655 |
Anatomy-MAT
| Id | Subject | Object | Predicate | Lexical cue | mat_id |
|---|---|---|---|---|---|
| T1 | 5-14 | Body_part | denotes | Endosperm | http://purl.obolibrary.org/obo/MAT_0000227 |
| T2 | 201-210 | Body_part | denotes | endosperm | http://purl.obolibrary.org/obo/MAT_0000227 |