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PubMed:2685126 JSONTXT

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sentences

Id Subject Object Predicate Lexical cue
TextSentencer_T1 0-91 Sentence denotes Interspecies gene transfer in vivo producing an outbreak of multiply resistant shigellosis.
TextSentencer_T2 92-260 Sentence denotes In 1983, a small outbreak of infections caused by a previously unrecognized multiply-drug-resistant Shigella flexneri 3a strain occurred on the Hopi Indian reservation.
TextSentencer_T3 261-487 Sentence denotes The index patient, a diabetic woman with recurrent Escherichia coli bacteriuria on prophylactic trimethoprim/sulfamethoxazole (TMP/SMZ) therapy, was hospitalized with concurrent E. coli urinary tract infection and shigellosis.
TextSentencer_T4 488-665 Sentence denotes Both E. coli isolated from her urine and S. flexneri isolated from her stool were resistant to ampicillin, carbenicillin, streptomycin, sulfisoxazole, tetracycline, and TMP/SMZ.
TextSentencer_T5 666-854 Sentence denotes Both isolates contained a 35-MDa plasmid transferrable to recipient E. coli, and transconjugates acquiring the plasmid from either donor strain also acquired resistance to the same agents.
TextSentencer_T6 855-971 Sentence denotes The number and size of fragments generated by plasmid digestion with DNA restriction endonuclease ClaI were similar.
TextSentencer_T7 972-1202 Sentence denotes A review of clinical microbiology records showed that an E. coli strain isolated from the patient 3 w before the onset of shigellosis had identical antimicrobial resistance to the E. coli and Shigella isolated during the outbreak.
TextSentencer_T8 1203-1355 Sentence denotes These studies indicate that the index patient receiving prophylactic TMP/SMZ was the likely source of the R-plasmid for the outbreak strain of Shigella.
T1 0-91 Sentence denotes Interspecies gene transfer in vivo producing an outbreak of multiply resistant shigellosis.
T2 92-260 Sentence denotes In 1983, a small outbreak of infections caused by a previously unrecognized multiply-drug-resistant Shigella flexneri 3a strain occurred on the Hopi Indian reservation.
T3 261-487 Sentence denotes The index patient, a diabetic woman with recurrent Escherichia coli bacteriuria on prophylactic trimethoprim/sulfamethoxazole (TMP/SMZ) therapy, was hospitalized with concurrent E. coli urinary tract infection and shigellosis.
T4 488-665 Sentence denotes Both E. coli isolated from her urine and S. flexneri isolated from her stool were resistant to ampicillin, carbenicillin, streptomycin, sulfisoxazole, tetracycline, and TMP/SMZ.
T5 666-854 Sentence denotes Both isolates contained a 35-MDa plasmid transferrable to recipient E. coli, and transconjugates acquiring the plasmid from either donor strain also acquired resistance to the same agents.
T6 855-971 Sentence denotes The number and size of fragments generated by plasmid digestion with DNA restriction endonuclease ClaI were similar.
T7 972-1202 Sentence denotes A review of clinical microbiology records showed that an E. coli strain isolated from the patient 3 w before the onset of shigellosis had identical antimicrobial resistance to the E. coli and Shigella isolated during the outbreak.
T8 1203-1355 Sentence denotes These studies indicate that the index patient receiving prophylactic TMP/SMZ was the likely source of the R-plasmid for the outbreak strain of Shigella.

DisGeNET

Id Subject Object Predicate Lexical cue
T0 388-391 gene:2012 denotes TMP
T1 329-340 disease:C0004659 denotes bacteriuria
T2 388-391 gene:2012 denotes TMP
T3 475-486 disease:C0013371 denotes shigellosis
R1 T0 T1 associated_with TMP,bacteriuria
R2 T2 T3 associated_with TMP,shigellosis

PubmedHPO

Id Subject Object Predicate Lexical cue
T1 447-470 HP_0000010 denotes urinary tract infection

DisGeNET5_gene_disease

Id Subject Object Predicate Lexical cue
2685126-2#127#130#gene2012 388-391 gene2012 denotes TMP
2685126-2#68#79#diseaseC0004659 329-340 diseaseC0004659 denotes bacteriuria
2685126-7#69#72#gene2012 1272-1275 gene2012 denotes TMP
2685126-7#143#151#diseaseC0013371 1346-1354 diseaseC0013371 denotes Shigella
127#130#gene201268#79#diseaseC0004659 2685126-2#127#130#gene2012 2685126-2#68#79#diseaseC0004659 associated_with TMP,bacteriuria
69#72#gene2012143#151#diseaseC0013371 2685126-7#69#72#gene2012 2685126-7#143#151#diseaseC0013371 associated_with TMP,Shigella

UBERON-AE

Id Subject Object Predicate Lexical cue
PD-UBERON-AE-B_T1 519-524 http://purl.obolibrary.org/obo/UBERON_0001088 denotes urine

PubCasesHPO

Id Subject Object Predicate Lexical cue
AB1 329-340 HP:0012461 denotes bacteriuria

PubCasesORDO

Id Subject Object Predicate Lexical cue
TI1 79-90 ORDO:810 denotes shigellosis
AB1 475-486 ORDO:810 denotes shigellosis
AB2 1094-1105 ORDO:810 denotes shigellosis

performance-test

Id Subject Object Predicate Lexical cue
PD-UBERON-AE-B_T1 519-524 http://purl.obolibrary.org/obo/UBERON_0001088 denotes urine