PubMed:26715202 / 717-1022
Annnotations
Glycan-Motif
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T5 | 140-143 | https://glytoucan.org/Structures/Glycans/G46613JI | denotes | GM1 |
| T6 | 140-143 | https://glytoucan.org/Structures/Glycans/G48558GR | denotes | GM1 |
| T7 | 189-192 | https://glytoucan.org/Structures/Glycans/G46613JI | denotes | GM1 |
| T8 | 189-192 | https://glytoucan.org/Structures/Glycans/G48558GR | denotes | GM1 |
| T9 | 243-246 | https://glytoucan.org/Structures/Glycans/G46613JI | denotes | GM1 |
| T10 | 243-246 | https://glytoucan.org/Structures/Glycans/G48558GR | denotes | GM1 |
GlyCosmos6-Glycan-Motif-Image
| Id | Subject | Object | Predicate | Lexical cue | image |
|---|---|---|---|---|---|
| T5 | 140-143 | Glycan_Motif | denotes | GM1 | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G48558GR|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G46613JI |
| T7 | 189-192 | Glycan_Motif | denotes | GM1 | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G48558GR|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G46613JI |
| T9 | 243-246 | Glycan_Motif | denotes | GM1 | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G48558GR|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G46613JI |
Glycosmos6-GlycoEpitope
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T3 | 140-143 | http://www.glycoepitope.jp/epitopes/EP0050 | denotes | GM1 |
| T4 | 189-192 | http://www.glycoepitope.jp/epitopes/EP0050 | denotes | GM1 |
| T5 | 243-246 | http://www.glycoepitope.jp/epitopes/EP0050 | denotes | GM1 |
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| TextSentencer_T5 | 0-305 | Sentence | denotes | Using STD NMR and X-ray crystallography, we found that the innate immune regulator Complement Factor H (FH) binds a previously not reported GM1 conformation that is not compatible with the GM1 binding sites of other structurally characterized GM1-binding lectins such as the Simian Virus 40 (SV40) capsid. |
| T5 | 0-305 | Sentence | denotes | Using STD NMR and X-ray crystallography, we found that the innate immune regulator Complement Factor H (FH) binds a previously not reported GM1 conformation that is not compatible with the GM1 binding sites of other structurally characterized GM1-binding lectins such as the Simian Virus 40 (SV40) capsid. |
| T5 | 0-305 | Sentence | denotes | Using STD NMR and X-ray crystallography, we found that the innate immune regulator Complement Factor H (FH) binds a previously not reported GM1 conformation that is not compatible with the GM1 binding sites of other structurally characterized GM1-binding lectins such as the Simian Virus 40 (SV40) capsid. |
GlyCosmos6-Glycan-Motif-Structure
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T5 | 140-143 | https://glytoucan.org/Structures/Glycans/G46613JI | denotes | GM1 |
| T6 | 140-143 | https://glytoucan.org/Structures/Glycans/G48558GR | denotes | GM1 |
| T7 | 189-192 | https://glytoucan.org/Structures/Glycans/G46613JI | denotes | GM1 |
| T8 | 189-192 | https://glytoucan.org/Structures/Glycans/G48558GR | denotes | GM1 |
| T9 | 243-246 | https://glytoucan.org/Structures/Glycans/G46613JI | denotes | GM1 |
| T10 | 243-246 | https://glytoucan.org/Structures/Glycans/G48558GR | denotes | GM1 |
GlyCosmos15-Glycan
| Id | Subject | Object | Predicate | Lexical cue | image |
|---|---|---|---|---|---|
| T3 | 140-143 | Glycan | denotes | GM1 | |
| T4 | 189-192 | Glycan | denotes | GM1 | |
| T5 | 243-246 | Glycan | denotes | GM1 |
uniprot-human
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 6-9 | http://www.uniprot.org/uniprot/Q06520 | denotes | STD |
| T2 | 104-106 | http://www.uniprot.org/uniprot/P07954 | denotes | FH |
GlycoBiology-NCBITAXON
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T6 | 275-287 | http://purl.bioontology.org/ontology/NCBITAXON/11642 | denotes | Simian Virus |
| T7 | 275-287 | http://purl.bioontology.org/ontology/NCBITAXON/46771 | denotes | Simian Virus |
| T8 | 275-290 | http://purl.bioontology.org/ontology/NCBITAXON/10633 | denotes | Simian Virus 40 |
| T9 | 275-290 | http://purl.bioontology.org/ontology/NCBITAXON/585074 | denotes | Simian Virus 40 |
| T10 | 282-287 | http://purl.bioontology.org/ontology/NCBITAXON/184751 | denotes | Virus |
GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T3 | 59-72 | http://purl.obolibrary.org/obo/GO_0045087 | denotes | innate immune |
| T4 | 59-82 | http://purl.obolibrary.org/obo/GO_0045088 | denotes | innate immune regulator |
| T5 | 73-82 | http://purl.obolibrary.org/obo/GO_0065007 | denotes | regulator |
GO-MF
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T2 | 108-113 | http://purl.obolibrary.org/obo/GO_0070026 | denotes | binds |
| T3 | 193-200 | http://purl.obolibrary.org/obo/GO_0070026 | denotes | binding |
| T4 | 247-254 | http://purl.obolibrary.org/obo/GO_0070026 | denotes | binding |
| T6 | 108-113 | http://purl.obolibrary.org/obo/GO_0003680 | denotes | binds |
| T7 | 193-200 | http://purl.obolibrary.org/obo/GO_0003680 | denotes | binding |
| T8 | 247-254 | http://purl.obolibrary.org/obo/GO_0003680 | denotes | binding |
| T10 | 108-113 | http://purl.obolibrary.org/obo/GO_0017091 | denotes | binds |
| T11 | 193-200 | http://purl.obolibrary.org/obo/GO_0017091 | denotes | binding |
| T12 | 247-254 | http://purl.obolibrary.org/obo/GO_0017091 | denotes | binding |
| T14 | 108-113 | http://purl.obolibrary.org/obo/GO_0005488 | denotes | binds |
| T15 | 193-200 | http://purl.obolibrary.org/obo/GO_0005488 | denotes | binding |
| T16 | 247-254 | http://purl.obolibrary.org/obo/GO_0005488 | denotes | binding |
GlycoBiology-Epitope
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| PD-GlycoEpitope-B_T3 | 140-143 | http://www.glycoepitope.jp/epitopes/EP0050 | denotes | GM1 |
| PD-GlycoEpitope-B_T4 | 189-192 | http://www.glycoepitope.jp/epitopes/EP0050 | denotes | GM1 |
| PD-GlycoEpitope-B_T5 | 243-246 | http://www.glycoepitope.jp/epitopes/EP0050 | denotes | GM1 |
mondo_disease
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T1 | 6-9 | Disease | denotes | STD | http://purl.obolibrary.org/obo/MONDO_0021681 |
NCBITAXON
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T2 | 275-290 | OrganismTaxon | denotes | Simian Virus 40 | 1891767 |
| T3 | 292-296 | OrganismTaxon | denotes | SV40 | 1891767 |
Glycosmos15-GlycoEpitope
| Id | Subject | Object | Predicate | Lexical cue | glycoepitope_id |
|---|---|---|---|---|---|
| T3 | 140-143 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | GM1 | http://www.glycoepitope.jp/epitopes/EP0050 |
| T4 | 189-192 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | GM1 | http://www.glycoepitope.jp/epitopes/EP0050 |
| T5 | 243-246 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | GM1 | http://www.glycoepitope.jp/epitopes/EP0050 |