PubMed:26684240 / 973-1167
Annnotations
LitCoin-entities
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| 11005 | 6-13 | DiseaseOrPhenotypicFeature | denotes | GEP-NET | MESH:C535650 |
| 11006 | 14-22 | OrganismTaxon | denotes | patients | NCBITaxon:9606 |
| 11007 | 28-32 | GeneOrGeneProduct | denotes | TP53 | NCBIGene:7157 |
| 11008 | 89-115 | DiseaseOrPhenotypicFeature | denotes | intestinal grade (G) 1 NET | MESH:D007414 |
| 11009 | 116-123 | OrganismTaxon | denotes | patient | NCBITaxon:9606 |
| 11010 | 129-133 | GeneOrGeneProduct | denotes | BRAF | NCBIGene:673 |
| 11011 | 134-139 | SequenceVariant | denotes | V600E | DBSNP:rs113488022 |
| 11012 | 174-183 | ChemicalEntity | denotes | pazopanib | MESH:C516667 |
LitCoin-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T7 | 0-194 | Sentence | denotes | Three GEP-NET patients with TP53 mutations demonstrated a durable response and one small intestinal grade (G) 1 NET patient with BRAF V600E mutation showed progression after pazopanib treatment. |
LitCoin-SeqVar
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T2 | 134-139 | SequenceVariant | denotes | V600E |
LitCoin-GeneOrGeneProduct-v2
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T23 | 10-13 | GeneOrGeneProduct | denotes | NET |
| T24 | 28-32 | GeneOrGeneProduct | denotes | TP53 |
| T25 | 83-88 | GeneOrGeneProduct | denotes | small |
| T26 | 89-99 | GeneOrGeneProduct | denotes | intestinal |
| T27 | 112-115 | GeneOrGeneProduct | denotes | NET |
| T28 | 129-133 | GeneOrGeneProduct | denotes | BRAF |
LitCoin-GeneOrGeneProduct-v0
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T46 | 10-13 | GeneOrGeneProduct | denotes | NET |
| T47 | 28-32 | GeneOrGeneProduct | denotes | TP53 |
| T48 | 33-42 | GeneOrGeneProduct | denotes | mutations |
| T49 | 83-88 | GeneOrGeneProduct | denotes | small |
| T50 | 89-99 | GeneOrGeneProduct | denotes | intestinal |
| T51 | 112-115 | GeneOrGeneProduct | denotes | NET |
| T52 | 129-133 | GeneOrGeneProduct | denotes | BRAF |
| T53 | 140-148 | GeneOrGeneProduct | denotes | mutation |
LitCoin-GeneOrGeneProduct-v3
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T22 | 10-13 | GeneOrGeneProduct | denotes | NET |
| T23 | 28-32 | GeneOrGeneProduct | denotes | TP53 |
| T24 | 112-115 | GeneOrGeneProduct | denotes | NET |
| T25 | 129-133 | GeneOrGeneProduct | denotes | BRAF |
LitCoin_Mondo_095
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T8 | 6-13 | DiseaseOrPhenotypicFeature | denotes | GEP-NET | 0024503 |
LitCoin-MeSH-Disease-2
| Id | Subject | Object | Predicate | Lexical cue | ID: |
|---|---|---|---|---|---|
| T8 | 6-13 | DiseaseOrPhenotypicFeature | denotes | GEP-NET | DISEASE |
| T9 | 89-115 | DiseaseOrPhenotypicFeature | denotes | intestinal grade (G) 1 NET | DISEASE |
LitCoin-MONDO_bioort2019
| Id | Subject | Object | Predicate | Lexical cue | #label |
|---|---|---|---|---|---|
| T8 | 6-13 | DiseaseOrPhenotypicFeature | denotes | GEP-NET | DISEASE |
| T9 | 89-115 | DiseaseOrPhenotypicFeature | denotes | intestinal grade (G) 1 NET | DISEASE |
LitCoin-Chemical-MeSH-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | ID: |
|---|---|---|---|---|---|
| T3 | 174-183 | ChemicalEntity | denotes | pazopanib | C516667|http://purl.obolibrary.org/obo/CHEBI_71219 |
LitCoin-NCBITaxon-2
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T2 | 14-22 | OrganismTaxon | denotes | patients |
| T3 | 116-123 | OrganismTaxon | denotes | patient |
LitCoin-training-merged
| Id | Subject | Object | Predicate | Lexical cue | #label | ID: |
|---|---|---|---|---|---|---|
| T3 | 174-183 | ChemicalEntity | denotes | pazopanib | http://purl.obolibrary.org/obo/CHEBI_71219|C516667 | |
| T25 | 129-133 | GeneOrGeneProduct | denotes | BRAF | ||
| T24 | 112-115 | GeneOrGeneProduct | denotes | NET | ||
| T23 | 28-32 | GeneOrGeneProduct | denotes | TP53 | ||
| T22 | 10-13 | GeneOrGeneProduct | denotes | NET | ||
| T48673 | 89-115 | DiseaseOrPhenotypicFeature | denotes | intestinal grade (G) 1 NET | DISEASE | |
| T20286 | 6-13 | DiseaseOrPhenotypicFeature | denotes | GEP-NET | DISEASE | |
| T57822 | 116-123 | OrganismTaxon | denotes | patient | ||
| T87458 | 14-22 | OrganismTaxon | denotes | patients | ||
| T55890 | 134-139 | SequenceVariant | denotes | V600E |