> top > docs > PubMed:26646447 > annotations

PubMed:26646447 JSONTXT

Annnotations TAB JSON ListView MergeView

sentences

Id Subject Object Predicate Lexical cue
TextSentencer_T1 0-131 Sentence denotes Size product modulation by enzyme concentration reveals two distinct levan elongation mechanisms in Bacillus subtilis levansucrase.
TextSentencer_T2 132-355 Sentence denotes Two levan distributions are produced typically by Bacillus subtilis levansucrase (SacB): a high-molecular weight (HMW) levan with an average molecular weight of 2300 kDa, and a low-molecular weight (LMW) levan with 7.2 kDa.
TextSentencer_T3 356-460 Sentence denotes Previous results have demonstrated how reaction conditions modulate levan molecular weight distribution.
TextSentencer_T4 461-653 Sentence denotes Here we demonstrate that the SacB enzyme is able to perform two mechanisms: a processive mechanism for the synthesis of HMW levan and a non-processive mechanism for the synthesis of LMW levan.
TextSentencer_T5 654-756 Sentence denotes Furthermore, the effect of enzyme and substrate concentration on the elongation mechanism was studied.
TextSentencer_T6 757-902 Sentence denotes While a negligible effect of substrate concentration was observed, we found that SacB elongation mechanism is determined by enzyme concentration.
TextSentencer_T7 903-1115 Sentence denotes A high concentration of enzyme is required to synthesize LMW levan, involving the sequential formation of a wide variety of intermediate size levan oligosaccharides with a degree of polymerization (DP) up to ∼70.
TextSentencer_T8 1116-1292 Sentence denotes In contrast, an HMW levan distribution is synthesized through a processive mechanism producing oligosaccharides with DP <20, in reactions occurring at low enzyme concentration.
TextSentencer_T9 1293-1610 Sentence denotes Additionally, reactions where levansucrase concentration was varied while the total enzyme activity was kept constant (using a combination of active SacB and an inactive SacB E342A/D86A) allowed us to demonstrate that enzyme concentration and not enzyme activity affects the final levan molecular weight distribution.
TextSentencer_T10 1611-1780 Sentence denotes The effect of enzyme concentration on the elongation mechanism is discussed in detail, finding that protein-product interactions are responsible for the mechanism shift.
T5 654-756 Sentence denotes Furthermore, the effect of enzyme and substrate concentration on the elongation mechanism was studied.
T6 757-902 Sentence denotes While a negligible effect of substrate concentration was observed, we found that SacB elongation mechanism is determined by enzyme concentration.
T7 903-1115 Sentence denotes A high concentration of enzyme is required to synthesize LMW levan, involving the sequential formation of a wide variety of intermediate size levan oligosaccharides with a degree of polymerization (DP) up to ∼70.
T8 1116-1292 Sentence denotes In contrast, an HMW levan distribution is synthesized through a processive mechanism producing oligosaccharides with DP <20, in reactions occurring at low enzyme concentration.
T9 1293-1610 Sentence denotes Additionally, reactions where levansucrase concentration was varied while the total enzyme activity was kept constant (using a combination of active SacB and an inactive SacB E342A/D86A) allowed us to demonstrate that enzyme concentration and not enzyme activity affects the final levan molecular weight distribution.
T10 1611-1780 Sentence denotes The effect of enzyme concentration on the elongation mechanism is discussed in detail, finding that protein-product interactions are responsible for the mechanism shift.
T1 0-131 Sentence denotes Size product modulation by enzyme concentration reveals two distinct levan elongation mechanisms in Bacillus subtilis levansucrase.
T2 132-355 Sentence denotes Two levan distributions are produced typically by Bacillus subtilis levansucrase (SacB): a high-molecular weight (HMW) levan with an average molecular weight of 2300 kDa, and a low-molecular weight (LMW) levan with 7.2 kDa.
T3 356-460 Sentence denotes Previous results have demonstrated how reaction conditions modulate levan molecular weight distribution.
T4 461-653 Sentence denotes Here we demonstrate that the SacB enzyme is able to perform two mechanisms: a processive mechanism for the synthesis of HMW levan and a non-processive mechanism for the synthesis of LMW levan.
T1 0-131 Sentence denotes Size product modulation by enzyme concentration reveals two distinct levan elongation mechanisms in Bacillus subtilis levansucrase.
T2 132-355 Sentence denotes Two levan distributions are produced typically by Bacillus subtilis levansucrase (SacB): a high-molecular weight (HMW) levan with an average molecular weight of 2300 kDa, and a low-molecular weight (LMW) levan with 7.2 kDa.
T3 356-460 Sentence denotes Previous results have demonstrated how reaction conditions modulate levan molecular weight distribution.
T4 461-653 Sentence denotes Here we demonstrate that the SacB enzyme is able to perform two mechanisms: a processive mechanism for the synthesis of HMW levan and a non-processive mechanism for the synthesis of LMW levan.
T5 654-756 Sentence denotes Furthermore, the effect of enzyme and substrate concentration on the elongation mechanism was studied.
T6 757-902 Sentence denotes While a negligible effect of substrate concentration was observed, we found that SacB elongation mechanism is determined by enzyme concentration.
T7 903-1115 Sentence denotes A high concentration of enzyme is required to synthesize LMW levan, involving the sequential formation of a wide variety of intermediate size levan oligosaccharides with a degree of polymerization (DP) up to ∼70.
T8 1116-1292 Sentence denotes In contrast, an HMW levan distribution is synthesized through a processive mechanism producing oligosaccharides with DP <20, in reactions occurring at low enzyme concentration.
T9 1293-1610 Sentence denotes Additionally, reactions where levansucrase concentration was varied while the total enzyme activity was kept constant (using a combination of active SacB and an inactive SacB E342A/D86A) allowed us to demonstrate that enzyme concentration and not enzyme activity affects the final levan molecular weight distribution.
T10 1611-1780 Sentence denotes The effect of enzyme concentration on the elongation mechanism is discussed in detail, finding that protein-product interactions are responsible for the mechanism shift.

NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T1 100-117 OrganismTaxon denotes Bacillus subtilis NCBItxid:1423
T2 182-199 OrganismTaxon denotes Bacillus subtilis NCBItxid:1423

GlyCosmos6-CLO

Id Subject Object Predicate Lexical cue
T1 1384-1392 http://purl.obolibrary.org/obo/CLO_0001658 denotes activity
T2 1435-1441 http://purl.obolibrary.org/obo/CLO_0001658 denotes active
T3 1547-1555 http://purl.obolibrary.org/obo/CLO_0001658 denotes activity

GlycoBiology-FMA

Id Subject Object Predicate Lexical cue
_T1 1027-1039 FMAID:74531 denotes intermediate
_T2 1027-1039 FMAID:179268 denotes intermediate
_T3 1051-1067 FMAID:82742 denotes oligosaccharides
_T4 1051-1067 FMAID:196731 denotes oligosaccharides
_T5 1211-1227 FMAID:82742 denotes oligosaccharides
_T6 1211-1227 FMAID:196731 denotes oligosaccharides
_T7 1711-1718 FMAID:67257 denotes protein
_T8 1711-1718 FMAID:165447 denotes protein

uniprot-human

Id Subject Object Predicate Lexical cue
T1 1101-1103 http://www.uniprot.org/uniprot/P15924 denotes DP
T2 1233-1235 http://www.uniprot.org/uniprot/P15924 denotes DP

uniprot-mouse

Id Subject Object Predicate Lexical cue
T1 1101-1103 http://www.uniprot.org/uniprot/E9Q557 denotes DP
T2 1233-1235 http://www.uniprot.org/uniprot/E9Q557 denotes DP

GlycoBiology-NCBITAXON

Id Subject Object Predicate Lexical cue
T1 86-96 http://purl.bioontology.org/ontology/NCBITAXON/127244 denotes mechanisms
T2 100-108 http://purl.bioontology.org/ontology/NCBITAXON/55087 denotes Bacillus
T3 100-117 http://purl.bioontology.org/ontology/NCBITAXON/1423 denotes Bacillus subtilis
T4 182-190 http://purl.bioontology.org/ontology/NCBITAXON/55087 denotes Bacillus
T5 182-199 http://purl.bioontology.org/ontology/NCBITAXON/1423 denotes Bacillus subtilis
T6 525-535 http://purl.bioontology.org/ontology/NCBITAXON/127244 denotes mechanisms
T7 550-559 http://purl.bioontology.org/ontology/NCBITAXON/127244 denotes mechanism
T8 597-600 http://purl.bioontology.org/ontology/NCBITAXON/604139 denotes non
T9 612-621 http://purl.bioontology.org/ontology/NCBITAXON/127244 denotes mechanism
T10 734-743 http://purl.bioontology.org/ontology/NCBITAXON/127244 denotes mechanism
T11 854-863 http://purl.bioontology.org/ontology/NCBITAXON/127244 denotes mechanism
T12 1191-1200 http://purl.bioontology.org/ontology/NCBITAXON/127244 denotes mechanism
T13 1664-1673 http://purl.bioontology.org/ontology/NCBITAXON/127244 denotes mechanism
T14 1698-1705 http://purl.bioontology.org/ontology/STY/T033 denotes finding
T15 1764-1773 http://purl.bioontology.org/ontology/NCBITAXON/127244 denotes mechanism

GO-BP

Id Subject Object Predicate Lexical cue
T1 13-33 http://purl.obolibrary.org/obo/GO_0030234 denotes modulation by enzyme
T2 568-577 http://purl.obolibrary.org/obo/GO_0009058 denotes synthesis
T3 630-639 http://purl.obolibrary.org/obo/GO_0009058 denotes synthesis
T4 996-1005 http://purl.obolibrary.org/obo/GO_0009058 denotes formation
T5 1377-1392 http://purl.obolibrary.org/obo/GO_0003824 denotes enzyme activity
T6 1540-1555 http://purl.obolibrary.org/obo/GO_0003824 denotes enzyme activity

GlyTouCan-IUPAC

Id Subject Object Predicate Lexical cue
GlycanIUPAC_T1 597-600 "http://rdf.glycoinfo.org/glycan/G02780QX" denotes non
GlycanIUPAC_T2 597-600 "http://rdf.glycoinfo.org/glycan/G18425DX" denotes non
GlycanIUPAC_T3 597-600 "http://rdf.glycoinfo.org/glycan/G18630JE" denotes non
GlycanIUPAC_T4 597-600 "http://rdf.glycoinfo.org/glycan/G01004IT" denotes non
GlycanIUPAC_T5 597-600 "http://rdf.glycoinfo.org/glycan/G87301QZ" denotes non
GlycanIUPAC_T6 597-600 "http://rdf.glycoinfo.org/glycan/G39790GW" denotes non
GlycanIUPAC_T7 597-600 "http://rdf.glycoinfo.org/glycan/G42928BB" denotes non
GlycanIUPAC_T8 597-600 "http://rdf.glycoinfo.org/glycan/G51134HC" denotes non
GlycanIUPAC_T9 597-600 "http://rdf.glycoinfo.org/glycan/G68183GR" denotes non
GlycanIUPAC_T10 597-600 "http://rdf.glycoinfo.org/glycan/G46883FA" denotes non
GlycanIUPAC_T11 597-600 "http://rdf.glycoinfo.org/glycan/G54702VY" denotes non