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Glycosmos6-MAT

Id Subject Object Predicate Lexical cue
T1 273-283 http://purl.obolibrary.org/obo/MAT_0000043 denotes intestinal

sentences

Id Subject Object Predicate Lexical cue
TextSentencer_T1 0-108 Sentence denotes Functional analysis of N-linking oligosaccharyl transferase enzymes encoded by deep-sea vent proteobacteria.
TextSentencer_T2 109-372 Sentence denotes Bacterial N-linking oligosaccharyl transferases (OTase enzymes) transfer lipid-linked glycans to selected proteins in the periplasm and were first described in the intestinal pathogen Campylobacter jejuni, a member of the ε-proteobacteria-subdivision of bacteria.
TextSentencer_T3 373-660 Sentence denotes More recently, orthologues from other ε-proteobacterial Campylobacter and Helicobacter species and a δ-proteobacterium, Desulfovibrio desulfuricans, have been described, suggesting that these two subdivisions of bacteria may be a source of further N-linked protein glycosylation systems.
TextSentencer_T4 661-941 Sentence denotes Whole-genome sequencing of both ε- and δ-proteobacteria from deep-sea vent habitats, a rich source of species from these subdivisions, revealed putative ORFs encoding OTase enzymes and associated adjacent glycosyltransferases similar to the C. jejuni N-linked glycosylation locus.
TextSentencer_T5 942-1195 Sentence denotes We expressed putative OTase ORFs from the deep-sea vent species Nitratiruptor tergarcus, Sulfurovum lithotrophicum and Deferribacter desulfuricans in Escherichia coli and showed that they were able to functionally complement the C. jejuni OTase, CjPglB.
TextSentencer_T6 1196-1359 Sentence denotes The enzymes were shown to possess relaxed glycan specificity, transferring diverse glycan structures and demonstrated different glycosylation sequon specificities.
TextSentencer_T7 1360-1585 Sentence denotes Additionally, a permissive D. desulfuricans acceptor protein was identified, and we provide evidence that the N-linked glycan synthesized by N. tergarcus and S. lithotrophicum contains an acetylated sugar at the reducing end.
TextSentencer_T8 1586-1756 Sentence denotes This work demonstrates that deep-sea vent bacteria encode functional N-glycosylation machineries and are a potential source of biotechnologically important OTase enzymes.
T1 0-108 Sentence denotes Functional analysis of N-linking oligosaccharyl transferase enzymes encoded by deep-sea vent proteobacteria.
T2 109-372 Sentence denotes Bacterial N-linking oligosaccharyl transferases (OTase enzymes) transfer lipid-linked glycans to selected proteins in the periplasm and were first described in the intestinal pathogen Campylobacter jejuni, a member of the ε-proteobacteria-subdivision of bacteria.
T3 373-660 Sentence denotes More recently, orthologues from other ε-proteobacterial Campylobacter and Helicobacter species and a δ-proteobacterium, Desulfovibrio desulfuricans, have been described, suggesting that these two subdivisions of bacteria may be a source of further N-linked protein glycosylation systems.
T4 661-941 Sentence denotes Whole-genome sequencing of both ε- and δ-proteobacteria from deep-sea vent habitats, a rich source of species from these subdivisions, revealed putative ORFs encoding OTase enzymes and associated adjacent glycosyltransferases similar to the C. jejuni N-linked glycosylation locus.
T5 942-1195 Sentence denotes We expressed putative OTase ORFs from the deep-sea vent species Nitratiruptor tergarcus, Sulfurovum lithotrophicum and Deferribacter desulfuricans in Escherichia coli and showed that they were able to functionally complement the C. jejuni OTase, CjPglB.
T6 1196-1359 Sentence denotes The enzymes were shown to possess relaxed glycan specificity, transferring diverse glycan structures and demonstrated different glycosylation sequon specificities.
T7 1360-1585 Sentence denotes Additionally, a permissive D. desulfuricans acceptor protein was identified, and we provide evidence that the N-linked glycan synthesized by N. tergarcus and S. lithotrophicum contains an acetylated sugar at the reducing end.
T8 1586-1756 Sentence denotes This work demonstrates that deep-sea vent bacteria encode functional N-glycosylation machineries and are a potential source of biotechnologically important OTase enzymes.
T1 0-108 Sentence denotes Functional analysis of N-linking oligosaccharyl transferase enzymes encoded by deep-sea vent proteobacteria.
T2 109-372 Sentence denotes Bacterial N-linking oligosaccharyl transferases (OTase enzymes) transfer lipid-linked glycans to selected proteins in the periplasm and were first described in the intestinal pathogen Campylobacter jejuni, a member of the ε-proteobacteria-subdivision of bacteria.
T3 373-660 Sentence denotes More recently, orthologues from other ε-proteobacterial Campylobacter and Helicobacter species and a δ-proteobacterium, Desulfovibrio desulfuricans, have been described, suggesting that these two subdivisions of bacteria may be a source of further N-linked protein glycosylation systems.
T4 661-941 Sentence denotes Whole-genome sequencing of both ε- and δ-proteobacteria from deep-sea vent habitats, a rich source of species from these subdivisions, revealed putative ORFs encoding OTase enzymes and associated adjacent glycosyltransferases similar to the C. jejuni N-linked glycosylation locus.
T5 942-1195 Sentence denotes We expressed putative OTase ORFs from the deep-sea vent species Nitratiruptor tergarcus, Sulfurovum lithotrophicum and Deferribacter desulfuricans in Escherichia coli and showed that they were able to functionally complement the C. jejuni OTase, CjPglB.
T6 1196-1359 Sentence denotes The enzymes were shown to possess relaxed glycan specificity, transferring diverse glycan structures and demonstrated different glycosylation sequon specificities.
T7 1360-1585 Sentence denotes Additionally, a permissive D. desulfuricans acceptor protein was identified, and we provide evidence that the N-linked glycan synthesized by N. tergarcus and S. lithotrophicum contains an acetylated sugar at the reducing end.
T8 1586-1756 Sentence denotes This work demonstrates that deep-sea vent bacteria encode functional N-glycosylation machineries and are a potential source of biotechnologically important OTase enzymes.

GlycoBiology-PACDB

Id Subject Object Predicate Lexical cue
_T1 293-313 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC257,LEC564 denotes Campylobacter jejuni
_T2 1092-1108 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC295,LEC417 denotes Escherichia coli
_T3 1092-1108 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC157,LEC407 denotes Escherichia coli
_T4 1092-1108 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC754 denotes Escherichia coli
_T5 1092-1108 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC243,LEC640 denotes Escherichia coli
_T6 1092-1108 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC002,LEC056,LEC062,LEC069,LEC081,LEC111,LEC133,LEC171,LEC177,LEC187,LEC211,LEC242,LEC252,LEC258,LEC259,LEC260,LEC262,LEC369,LEC377,LEC422,LEC442,LEC448,LEC450,LEC451,LEC454,LEC472,LEC492,LEC620 denotes Escherichia coli
_T7 1092-1108 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC487 denotes Escherichia coli
_T8 1092-1108 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC244,LEC256,LEC354 denotes Escherichia coli
_T9 1092-1108 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC054,LEC058,LEC073,LEC082,LEC091,LEC103,LEC109,LEC110,LEC123,LEC158,LEC179,LEC198,LEC205,LEC222,LEC223,LEC224,LEC225,LEC232,LEC298,LEC357,LEC378,LEC383,LEC388,LEC389,LEC397,LEC401,LEC410,LEC452 denotes Escherichia coli
_T10 1092-1108 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC636 denotes Escherichia coli

GlycoBiology-FMA

Id Subject Object Predicate Lexical cue
_T1 33-47 FMAID:196731 denotes oligosaccharyl
_T2 33-47 FMAID:82742 denotes oligosaccharyl
_T3 79-83 FMAID:179288 denotes deep
_T4 79-83 FMAID:74551 denotes deep
_T5 129-143 FMAID:82742 denotes oligosaccharyl
_T6 129-143 FMAID:196731 denotes oligosaccharyl
_T7 182-187 FMAID:165448 denotes lipid
_T8 182-187 FMAID:67264 denotes lipid
_T9 215-223 FMAID:165447 denotes proteins
_T10 215-223 FMAID:67257 denotes proteins
_T11 273-283 FMAID:7199 denotes intestinal
_T12 273-283 FMAID:93674 denotes intestinal
_T13 273-283 FMAID:226991 denotes intestinal
_T14 630-637 FMAID:67257 denotes protein
_T15 630-637 FMAID:165447 denotes protein
_T16 667-673 FMAID:198062 denotes genome
_T17 667-673 FMAID:84116 denotes genome
_T18 722-726 FMAID:74551 denotes deep
_T19 722-726 FMAID:179288 denotes deep
_T20 984-988 FMAID:74551 denotes deep
_T21 984-988 FMAID:179288 denotes deep
_T22 1413-1420 FMAID:67257 denotes protein
_T23 1413-1420 FMAID:165447 denotes protein
_T24 1559-1564 FMAID:196724 denotes sugar
_T25 1614-1618 FMAID:74551 denotes deep
_T26 1614-1618 FMAID:179288 denotes deep

uniprot-human

Id Subject Object Predicate Lexical cue
T1 48-59 http://www.uniprot.org/uniprot/Q99484 denotes transferase
T2 144-156 http://www.uniprot.org/uniprot/Q99484 denotes transferases
T3 158-163 http://www.uniprot.org/uniprot/Q9UIQ6 denotes OTase
T4 828-833 http://www.uniprot.org/uniprot/Q9UIQ6 denotes OTase
T5 964-969 http://www.uniprot.org/uniprot/Q9UIQ6 denotes OTase
T6 1181-1186 http://www.uniprot.org/uniprot/Q9UIQ6 denotes OTase
T7 1742-1747 http://www.uniprot.org/uniprot/Q9UIQ6 denotes OTase

uniprot-mouse

Id Subject Object Predicate Lexical cue
T1 48-59 http://www.uniprot.org/uniprot/P38649 denotes transferase
T2 144-156 http://www.uniprot.org/uniprot/P38649 denotes transferases
T3 158-163 http://www.uniprot.org/uniprot/Q8C129 denotes OTase
T4 828-833 http://www.uniprot.org/uniprot/Q8C129 denotes OTase
T5 964-969 http://www.uniprot.org/uniprot/Q8C129 denotes OTase
T6 1181-1186 http://www.uniprot.org/uniprot/Q8C129 denotes OTase
T7 1742-1747 http://www.uniprot.org/uniprot/Q8C129 denotes OTase

GlycoBiology-NCBITAXON

Id Subject Object Predicate Lexical cue
T1 93-107 http://purl.bioontology.org/ontology/NCBITAXON/580370 denotes proteobacteria
T2 93-107 http://purl.bioontology.org/ontology/NCBITAXON/380367 denotes proteobacteria
T3 93-107 http://purl.bioontology.org/ontology/NCBITAXON/1224 denotes proteobacteria
T4 93-107 http://purl.bioontology.org/ontology/NCBITAXON/28216 denotes proteobacteria
T5 93-118 http://purl.bioontology.org/ontology/NCBITAXON/1161296 denotes proteobacteria. Bacterial
T6 93-118 http://purl.bioontology.org/ontology/NCBITAXON/225242 denotes proteobacteria. Bacterial
T7 93-118 http://purl.bioontology.org/ontology/NCBITAXON/717038 denotes proteobacteria. Bacterial
T8 93-118 http://purl.bioontology.org/ontology/NCBITAXON/687394 denotes proteobacteria. Bacterial
T9 93-118 http://purl.bioontology.org/ontology/NCBITAXON/669355 denotes proteobacteria. Bacterial
T10 93-118 http://purl.bioontology.org/ontology/NCBITAXON/669354 denotes proteobacteria. Bacterial
T11 93-118 http://purl.bioontology.org/ontology/NCBITAXON/93667 denotes proteobacteria. Bacterial
T12 93-118 http://purl.bioontology.org/ontology/NCBITAXON/225238 denotes proteobacteria. Bacterial
T13 93-118 http://purl.bioontology.org/ontology/NCBITAXON/310972 denotes proteobacteria. Bacterial
T14 93-118 http://purl.bioontology.org/ontology/NCBITAXON/225237 denotes proteobacteria. Bacterial
T15 93-118 http://purl.bioontology.org/ontology/NCBITAXON/310971 denotes proteobacteria. Bacterial
T16 93-118 http://purl.bioontology.org/ontology/NCBITAXON/570299 denotes proteobacteria. Bacterial
T17 93-118 http://purl.bioontology.org/ontology/NCBITAXON/310970 denotes proteobacteria. Bacterial
T18 93-118 http://purl.bioontology.org/ontology/NCBITAXON/1298522 denotes proteobacteria. Bacterial
T19 93-118 http://purl.bioontology.org/ontology/NCBITAXON/310976 denotes proteobacteria. Bacterial
T20 93-118 http://purl.bioontology.org/ontology/NCBITAXON/650109 denotes proteobacteria. Bacterial
T21 93-118 http://purl.bioontology.org/ontology/NCBITAXON/310969 denotes proteobacteria. Bacterial
T22 93-118 http://purl.bioontology.org/ontology/NCBITAXON/347072 denotes proteobacteria. Bacterial
T23 93-118 http://purl.bioontology.org/ontology/NCBITAXON/225241 denotes proteobacteria. Bacterial
T24 93-118 http://purl.bioontology.org/ontology/NCBITAXON/225239 denotes proteobacteria. Bacterial
T25 93-118 http://purl.bioontology.org/ontology/NCBITAXON/1331941 denotes proteobacteria. Bacterial
T26 93-118 http://purl.bioontology.org/ontology/NCBITAXON/167878 denotes proteobacteria. Bacterial
T27 93-118 http://purl.bioontology.org/ontology/NCBITAXON/93668 denotes proteobacteria. Bacterial
T28 93-118 http://purl.bioontology.org/ontology/NCBITAXON/687393 denotes proteobacteria. Bacterial
T29 93-118 http://purl.bioontology.org/ontology/NCBITAXON/1331940 denotes proteobacteria. Bacterial
T30 93-118 http://purl.bioontology.org/ontology/NCBITAXON/1331939 denotes proteobacteria. Bacterial
T31 93-118 http://purl.bioontology.org/ontology/NCBITAXON/1331938 denotes proteobacteria. Bacterial
T32 93-118 http://purl.bioontology.org/ontology/NCBITAXON/561262 denotes proteobacteria. Bacterial
T33 93-118 http://purl.bioontology.org/ontology/NCBITAXON/1331936 denotes proteobacteria. Bacterial
T34 93-118 http://purl.bioontology.org/ontology/NCBITAXON/1331935 denotes proteobacteria. Bacterial
T35 93-118 http://purl.bioontology.org/ontology/NCBITAXON/687395 denotes proteobacteria. Bacterial
T36 93-118 http://purl.bioontology.org/ontology/NCBITAXON/93659 denotes proteobacteria. Bacterial
T37 93-118 http://purl.bioontology.org/ontology/NCBITAXON/1331934 denotes proteobacteria. Bacterial
T38 93-118 http://purl.bioontology.org/ontology/NCBITAXON/167877 denotes proteobacteria. Bacterial
T39 93-118 http://purl.bioontology.org/ontology/NCBITAXON/538961 denotes proteobacteria. Bacterial
T40 93-118 http://purl.bioontology.org/ontology/NCBITAXON/1331932 denotes proteobacteria. Bacterial
T41 93-118 http://purl.bioontology.org/ontology/NCBITAXON/538962 denotes proteobacteria. Bacterial
T42 93-118 http://purl.bioontology.org/ontology/NCBITAXON/1331931 denotes proteobacteria. Bacterial
T43 93-118 http://purl.bioontology.org/ontology/NCBITAXON/1226955 denotes proteobacteria. Bacterial
T44 93-118 http://purl.bioontology.org/ontology/NCBITAXON/377631 denotes proteobacteria. Bacterial
T45 93-118 http://purl.bioontology.org/ontology/NCBITAXON/1226956 denotes proteobacteria. Bacterial
T46 93-118 http://purl.bioontology.org/ontology/NCBITAXON/383380 denotes proteobacteria. Bacterial
T47 93-118 http://purl.bioontology.org/ontology/NCBITAXON/314726 denotes proteobacteria. Bacterial
T48 93-118 http://purl.bioontology.org/ontology/NCBITAXON/1155952 denotes proteobacteria. Bacterial
T49 93-118 http://purl.bioontology.org/ontology/NCBITAXON/1226957 denotes proteobacteria. Bacterial
T50 93-118 http://purl.bioontology.org/ontology/NCBITAXON/332335 denotes proteobacteria. Bacterial
T51 93-118 http://purl.bioontology.org/ontology/NCBITAXON/1226959 denotes proteobacteria. Bacterial
T52 93-118 http://purl.bioontology.org/ontology/NCBITAXON/687404 denotes proteobacteria. Bacterial
T53 93-118 http://purl.bioontology.org/ontology/NCBITAXON/561263 denotes proteobacteria. Bacterial
T54 93-118 http://purl.bioontology.org/ontology/NCBITAXON/687403 denotes proteobacteria. Bacterial
T55 93-118 http://purl.bioontology.org/ontology/NCBITAXON/687402 denotes proteobacteria. Bacterial
T56 93-118 http://purl.bioontology.org/ontology/NCBITAXON/538963 denotes proteobacteria. Bacterial
T57 93-118 http://purl.bioontology.org/ontology/NCBITAXON/687399 denotes proteobacteria. Bacterial
T58 93-118 http://purl.bioontology.org/ontology/NCBITAXON/225243 denotes proteobacteria. Bacterial
T59 93-118 http://purl.bioontology.org/ontology/NCBITAXON/155023 denotes proteobacteria. Bacterial
T60 93-118 http://purl.bioontology.org/ontology/NCBITAXON/1226961 denotes proteobacteria. Bacterial
T61 93-118 http://purl.bioontology.org/ontology/NCBITAXON/76824 denotes proteobacteria. Bacterial
T62 93-118 http://purl.bioontology.org/ontology/NCBITAXON/936003 denotes proteobacteria. Bacterial
T63 93-118 http://purl.bioontology.org/ontology/NCBITAXON/596073 denotes proteobacteria. Bacterial
T64 93-118 http://purl.bioontology.org/ontology/NCBITAXON/1226964 denotes proteobacteria. Bacterial
T65 93-118 http://purl.bioontology.org/ontology/NCBITAXON/596071 denotes proteobacteria. Bacterial
T66 93-118 http://purl.bioontology.org/ontology/NCBITAXON/1226965 denotes proteobacteria. Bacterial
T67 93-118 http://purl.bioontology.org/ontology/NCBITAXON/596070 denotes proteobacteria. Bacterial
T68 93-118 http://purl.bioontology.org/ontology/NCBITAXON/375463 denotes proteobacteria. Bacterial
T69 93-118 http://purl.bioontology.org/ontology/NCBITAXON/348620 denotes proteobacteria. Bacterial
T70 93-118 http://purl.bioontology.org/ontology/NCBITAXON/93654 denotes proteobacteria. Bacterial
T71 93-118 http://purl.bioontology.org/ontology/NCBITAXON/1226966 denotes proteobacteria. Bacterial
T72 93-118 http://purl.bioontology.org/ontology/NCBITAXON/93662 denotes proteobacteria. Bacterial
T73 93-118 http://purl.bioontology.org/ontology/NCBITAXON/380364 denotes proteobacteria. Bacterial
T74 93-118 http://purl.bioontology.org/ontology/NCBITAXON/93657 denotes proteobacteria. Bacterial
T75 93-118 http://purl.bioontology.org/ontology/NCBITAXON/489962 denotes proteobacteria. Bacterial
T76 93-118 http://purl.bioontology.org/ontology/NCBITAXON/93661 denotes proteobacteria. Bacterial
T77 93-118 http://purl.bioontology.org/ontology/NCBITAXON/1226963 denotes proteobacteria. Bacterial
T78 293-313 http://purl.bioontology.org/ontology/NCBITAXON/197 denotes Campylobacter jejuni
T79 333-347 http://purl.bioontology.org/ontology/NCBITAXON/380367 denotes proteobacteria
T80 333-347 http://purl.bioontology.org/ontology/NCBITAXON/1224 denotes proteobacteria
T81 333-347 http://purl.bioontology.org/ontology/NCBITAXON/580370 denotes proteobacteria
T82 333-347 http://purl.bioontology.org/ontology/NCBITAXON/28216 denotes proteobacteria
T83 363-371 http://purl.bioontology.org/ontology/NCBITAXON/629395 denotes bacteria
T84 363-371 http://purl.bioontology.org/ontology/NCBITAXON/2 denotes bacteria
T85 413-428 http://purl.bioontology.org/ontology/NCBITAXON/375463 denotes proteobacterial
T86 413-428 http://purl.bioontology.org/ontology/NCBITAXON/561262 denotes proteobacterial
T87 413-428 http://purl.bioontology.org/ontology/NCBITAXON/1224 denotes proteobacterial
T88 413-428 http://purl.bioontology.org/ontology/NCBITAXON/561263 denotes proteobacterial
T89 447-459 http://purl.bioontology.org/ontology/NCBITAXON/209 denotes Helicobacter
T90 447-467 http://purl.bioontology.org/ontology/NCBITAXON/218 denotes Helicobacter species
T91 474-491 http://purl.bioontology.org/ontology/NCBITAXON/175619 denotes δ-proteobacterium
T92 474-491 http://purl.bioontology.org/ontology/NCBITAXON/441643 denotes δ-proteobacterium
T93 474-491 http://purl.bioontology.org/ontology/NCBITAXON/801 denotes δ-proteobacterium
T94 476-491 http://purl.bioontology.org/ontology/NCBITAXON/225239 denotes proteobacterium
T95 476-491 http://purl.bioontology.org/ontology/NCBITAXON/1226966 denotes proteobacterium
T96 476-491 http://purl.bioontology.org/ontology/NCBITAXON/717038 denotes proteobacterium
T97 476-491 http://purl.bioontology.org/ontology/NCBITAXON/375463 denotes proteobacterium
T98 476-491 http://purl.bioontology.org/ontology/NCBITAXON/93654 denotes proteobacterium
T99 476-491 http://purl.bioontology.org/ontology/NCBITAXON/687394 denotes proteobacterium
T100 476-491 http://purl.bioontology.org/ontology/NCBITAXON/348620 denotes proteobacterium
T101 476-491 http://purl.bioontology.org/ontology/NCBITAXON/1226965 denotes proteobacterium
T102 476-491 http://purl.bioontology.org/ontology/NCBITAXON/596070 denotes proteobacterium
T103 476-491 http://purl.bioontology.org/ontology/NCBITAXON/1226964 denotes proteobacterium
T104 476-491 http://purl.bioontology.org/ontology/NCBITAXON/596071 denotes proteobacterium
T105 476-491 http://purl.bioontology.org/ontology/NCBITAXON/1226963 denotes proteobacterium
T106 476-491 http://purl.bioontology.org/ontology/NCBITAXON/596073 denotes proteobacterium
T107 476-491 http://purl.bioontology.org/ontology/NCBITAXON/1226961 denotes proteobacterium
T108 476-491 http://purl.bioontology.org/ontology/NCBITAXON/76824 denotes proteobacterium
T109 476-491 http://purl.bioontology.org/ontology/NCBITAXON/1161296 denotes proteobacterium
T110 476-491 http://purl.bioontology.org/ontology/NCBITAXON/155023 denotes proteobacterium
T111 476-491 http://purl.bioontology.org/ontology/NCBITAXON/538963 denotes proteobacterium
T112 476-491 http://purl.bioontology.org/ontology/NCBITAXON/687399 denotes proteobacterium
T113 476-491 http://purl.bioontology.org/ontology/NCBITAXON/561263 denotes proteobacterium
T114 476-491 http://purl.bioontology.org/ontology/NCBITAXON/687402 denotes proteobacterium
T115 476-491 http://purl.bioontology.org/ontology/NCBITAXON/380364 denotes proteobacterium
T116 476-491 http://purl.bioontology.org/ontology/NCBITAXON/687403 denotes proteobacterium
T117 476-491 http://purl.bioontology.org/ontology/NCBITAXON/1226959 denotes proteobacterium
T118 476-491 http://purl.bioontology.org/ontology/NCBITAXON/687404 denotes proteobacterium
T119 476-491 http://purl.bioontology.org/ontology/NCBITAXON/1226957 denotes proteobacterium
T120 476-491 http://purl.bioontology.org/ontology/NCBITAXON/332335 denotes proteobacterium
T121 476-491 http://purl.bioontology.org/ontology/NCBITAXON/314726 denotes proteobacterium
T122 476-491 http://purl.bioontology.org/ontology/NCBITAXON/1155952 denotes proteobacterium
T123 476-491 http://purl.bioontology.org/ontology/NCBITAXON/1226956 denotes proteobacterium
T124 476-491 http://purl.bioontology.org/ontology/NCBITAXON/383380 denotes proteobacterium
T125 476-491 http://purl.bioontology.org/ontology/NCBITAXON/1226955 denotes proteobacterium
T126 476-491 http://purl.bioontology.org/ontology/NCBITAXON/377631 denotes proteobacterium
T127 476-491 http://purl.bioontology.org/ontology/NCBITAXON/538962 denotes proteobacterium
T128 476-491 http://purl.bioontology.org/ontology/NCBITAXON/1331931 denotes proteobacterium
T129 476-491 http://purl.bioontology.org/ontology/NCBITAXON/538961 denotes proteobacterium
T130 476-491 http://purl.bioontology.org/ontology/NCBITAXON/1331932 denotes proteobacterium
T131 476-491 http://purl.bioontology.org/ontology/NCBITAXON/380367 denotes proteobacterium
T132 476-491 http://purl.bioontology.org/ontology/NCBITAXON/1331934 denotes proteobacterium
T133 476-491 http://purl.bioontology.org/ontology/NCBITAXON/561262 denotes proteobacterium
T134 476-491 http://purl.bioontology.org/ontology/NCBITAXON/1331935 denotes proteobacterium
T135 476-491 http://purl.bioontology.org/ontology/NCBITAXON/93661 denotes proteobacterium
T136 476-491 http://purl.bioontology.org/ontology/NCBITAXON/1331936 denotes proteobacterium
T137 476-491 http://purl.bioontology.org/ontology/NCBITAXON/167877 denotes proteobacterium
T138 476-491 http://purl.bioontology.org/ontology/NCBITAXON/1331938 denotes proteobacterium
T139 476-491 http://purl.bioontology.org/ontology/NCBITAXON/1224 denotes proteobacterium
T140 476-491 http://purl.bioontology.org/ontology/NCBITAXON/1331939 denotes proteobacterium
T141 476-491 http://purl.bioontology.org/ontology/NCBITAXON/489962 denotes proteobacterium
T142 476-491 http://purl.bioontology.org/ontology/NCBITAXON/1331940 denotes proteobacterium
T143 476-491 http://purl.bioontology.org/ontology/NCBITAXON/167878 denotes proteobacterium
T144 476-491 http://purl.bioontology.org/ontology/NCBITAXON/1331941 denotes proteobacterium
T145 476-491 http://purl.bioontology.org/ontology/NCBITAXON/93659 denotes proteobacterium
T146 476-491 http://purl.bioontology.org/ontology/NCBITAXON/93657 denotes proteobacterium
T147 476-491 http://purl.bioontology.org/ontology/NCBITAXON/936003 denotes proteobacterium
T148 476-491 http://purl.bioontology.org/ontology/NCBITAXON/225241 denotes proteobacterium
T149 476-491 http://purl.bioontology.org/ontology/NCBITAXON/347072 denotes proteobacterium
T150 476-491 http://purl.bioontology.org/ontology/NCBITAXON/310969 denotes proteobacterium
T151 476-491 http://purl.bioontology.org/ontology/NCBITAXON/650109 denotes proteobacterium
T152 476-491 http://purl.bioontology.org/ontology/NCBITAXON/310976 denotes proteobacterium
T153 476-491 http://purl.bioontology.org/ontology/NCBITAXON/1298522 denotes proteobacterium
T154 476-491 http://purl.bioontology.org/ontology/NCBITAXON/310970 denotes proteobacterium
T155 476-491 http://purl.bioontology.org/ontology/NCBITAXON/570299 denotes proteobacterium
T156 476-491 http://purl.bioontology.org/ontology/NCBITAXON/310971 denotes proteobacterium
T157 476-491 http://purl.bioontology.org/ontology/NCBITAXON/225237 denotes proteobacterium
T158 476-491 http://purl.bioontology.org/ontology/NCBITAXON/310972 denotes proteobacterium
T159 476-491 http://purl.bioontology.org/ontology/NCBITAXON/93667 denotes proteobacterium
T160 476-491 http://purl.bioontology.org/ontology/NCBITAXON/669354 denotes proteobacterium
T161 476-491 http://purl.bioontology.org/ontology/NCBITAXON/225238 denotes proteobacterium
T162 476-491 http://purl.bioontology.org/ontology/NCBITAXON/669355 denotes proteobacterium
T163 476-491 http://purl.bioontology.org/ontology/NCBITAXON/687393 denotes proteobacterium
T164 476-491 http://purl.bioontology.org/ontology/NCBITAXON/225242 denotes proteobacterium
T165 476-491 http://purl.bioontology.org/ontology/NCBITAXON/93668 denotes proteobacterium
T166 476-491 http://purl.bioontology.org/ontology/NCBITAXON/225243 denotes proteobacterium
T167 476-491 http://purl.bioontology.org/ontology/NCBITAXON/687395 denotes proteobacterium
T168 476-491 http://purl.bioontology.org/ontology/NCBITAXON/93662 denotes proteobacterium
T169 493-506 http://purl.bioontology.org/ontology/NCBITAXON/53244 denotes Desulfovibrio
T170 493-506 http://purl.bioontology.org/ontology/NCBITAXON/213115 denotes Desulfovibrio
T171 493-506 http://purl.bioontology.org/ontology/NCBITAXON/427922 denotes Desulfovibrio
T172 493-506 http://purl.bioontology.org/ontology/NCBITAXON/872 denotes Desulfovibrio
T173 493-506 http://purl.bioontology.org/ontology/NCBITAXON/47054 denotes Desulfovibrio
T174 493-506 http://purl.bioontology.org/ontology/NCBITAXON/885 denotes Desulfovibrio
T175 493-520 http://purl.bioontology.org/ontology/NCBITAXON/147047 denotes Desulfovibrio desulfuricans
T176 585-593 http://purl.bioontology.org/ontology/NCBITAXON/629395 denotes bacteria
T177 585-593 http://purl.bioontology.org/ontology/NCBITAXON/2 denotes bacteria
T178 702-716 http://purl.bioontology.org/ontology/NCBITAXON/380367 denotes proteobacteria
T179 702-716 http://purl.bioontology.org/ontology/NCBITAXON/580370 denotes proteobacteria
T180 702-716 http://purl.bioontology.org/ontology/NCBITAXON/1224 denotes proteobacteria
T181 702-716 http://purl.bioontology.org/ontology/NCBITAXON/28216 denotes proteobacteria
T182 1006-1019 http://purl.bioontology.org/ontology/NCBITAXON/269258 denotes Nitratiruptor
T183 1006-1029 http://purl.bioontology.org/ontology/NCBITAXON/269259 denotes Nitratiruptor tergarcus
T184 1031-1041 http://purl.bioontology.org/ontology/NCBITAXON/265570 denotes Sulfurovum
T185 1031-1056 http://purl.bioontology.org/ontology/NCBITAXON/206403 denotes Sulfurovum lithotrophicum
T186 1061-1074 http://purl.bioontology.org/ontology/NCBITAXON/53572 denotes Deferribacter
T187 1061-1074 http://purl.bioontology.org/ontology/NCBITAXON/200930 denotes Deferribacter
T188 1061-1074 http://purl.bioontology.org/ontology/NCBITAXON/68337 denotes Deferribacter
T189 1092-1103 http://purl.bioontology.org/ontology/NCBITAXON/561 denotes Escherichia
T190 1628-1636 http://purl.bioontology.org/ontology/NCBITAXON/629395 denotes bacteria
T191 1628-1636 http://purl.bioontology.org/ontology/NCBITAXON/2 denotes bacteria

GO-BP

Id Subject Object Predicate Lexical cue
T1 630-651 http://purl.obolibrary.org/obo/GO_0006486 denotes protein glycosylation
T2 638-651 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation
T3 921-934 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation
T4 1324-1337 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation
T5 1657-1670 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation
T6 912-934 http://purl.obolibrary.org/obo/GO_0006487 denotes N-linked glycosylation

GO-CC

Id Subject Object Predicate Lexical cue
T1 231-240 http://purl.obolibrary.org/obo/GO_0042597 denotes periplasm

UBERON-AE

Id Subject Object Predicate Lexical cue
T1 88-92 http://purl.obolibrary.org/obo/UBERON_2000298 denotes vent
T2 731-735 http://purl.obolibrary.org/obo/UBERON_2000298 denotes vent
T3 993-997 http://purl.obolibrary.org/obo/UBERON_2000298 denotes vent
T4 1623-1627 http://purl.obolibrary.org/obo/UBERON_2000298 denotes vent
T5 273-283 http://purl.obolibrary.org/obo/UBERON_0000160 denotes intestinal

GlycoBiology-MAT

Id Subject Object Predicate Lexical cue
T1 273-283 http://purl.obolibrary.org/obo/MAT_0000043 denotes intestinal

GlyTouCan-IUPAC

Id Subject Object Predicate Lexical cue
GlycanIUPAC_T1 1559-1564 "http://rdf.glycoinfo.org/glycan/G59665TO" denotes sugar
GlycanIUPAC_T2 1559-1564 "http://rdf.glycoinfo.org/glycan/G32915EI" denotes sugar
GlycanIUPAC_T3 1559-1564 "http://rdf.glycoinfo.org/glycan/G60625TS" denotes sugar

performance-test

Id Subject Object Predicate Lexical cue
PD-UBERON-AE-B_T1 273-283 http://purl.obolibrary.org/obo/UBERON_0000160 denotes intestinal
PD-UBERON-AE-B_T2 88-92 http://purl.obolibrary.org/obo/UBERON_2000298 denotes vent
PD-UBERON-AE-B_T3 731-735 http://purl.obolibrary.org/obo/UBERON_2000298 denotes vent
PD-UBERON-AE-B_T4 993-997 http://purl.obolibrary.org/obo/UBERON_2000298 denotes vent
PD-UBERON-AE-B_T5 1623-1627 http://purl.obolibrary.org/obo/UBERON_2000298 denotes vent

Anatomy-MAT

Id Subject Object Predicate Lexical cue mat_id
T1 273-283 Body_part denotes intestinal http://purl.obolibrary.org/obo/MAT_0000043

NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T1 93-107 OrganismTaxon denotes proteobacteria 1224
T2 293-313 OrganismTaxon denotes Campylobacter jejuni 197
T3 333-347 OrganismTaxon denotes proteobacteria 1224
T4 363-371 OrganismTaxon denotes bacteria 2|629395
T6 429-442 OrganismTaxon denotes Campylobacter 194
T7 447-459 OrganismTaxon denotes Helicobacter 209
T8 493-520 OrganismTaxon denotes Desulfovibrio desulfuricans 876
T9 585-593 OrganismTaxon denotes bacteria 2|629395
T11 702-716 OrganismTaxon denotes proteobacteria 1224
T12 1006-1029 OrganismTaxon denotes Nitratiruptor tergarcus 269259
T13 1031-1056 OrganismTaxon denotes Sulfurovum lithotrophicum 206403
T14 1061-1088 OrganismTaxon denotes Deferribacter desulfuricans 197162
T15 1092-1108 OrganismTaxon denotes Escherichia coli 562
T16 1628-1636 OrganismTaxon denotes bacteria 2|629395

Anatomy-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 88-92 Body_part denotes vent http://purl.obolibrary.org/obo/UBERON_0000162|http://purl.obolibrary.org/obo/UBERON_0012464|http://purl.obolibrary.org/obo/UBERON_2000298
T4 731-735 Body_part denotes vent http://purl.obolibrary.org/obo/UBERON_0000162|http://purl.obolibrary.org/obo/UBERON_0012464|http://purl.obolibrary.org/obo/UBERON_2000298
T7 993-997 Body_part denotes vent http://purl.obolibrary.org/obo/UBERON_0000162|http://purl.obolibrary.org/obo/UBERON_0012464|http://purl.obolibrary.org/obo/UBERON_2000298
T10 1623-1627 Body_part denotes vent http://purl.obolibrary.org/obo/UBERON_0000162|http://purl.obolibrary.org/obo/UBERON_0012464|http://purl.obolibrary.org/obo/UBERON_2000298