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sonoma2

Id Subject Object Predicate Lexical cue
T0 78-92 GENE denotes PCSK9-mediated
T1 93-132 DISEASE denotes autosomal dominant hypercholesterolemia
T2 134-179 GENE denotes Proprotein convertase subtilisin kexin type 9
T3 181-186 GENE denotes PCSK9
T4 215-238 MPA denotes cholesterol homeostasis
T5 248-253 GENE denotes PCSK9
T6 254-270 POSREG denotes gain-of-function
T7 272-275 POSREG denotes GOF
T8 277-286 VAR denotes mutations
T9 291-301 REG denotes associated
T10 307-346 DISEASE denotes autosomal dominant hypercholesterolemia
T11 348-351 DISEASE denotes ADH
T12 357-382 DISEASE denotes premature atherosclerosis
T13 384-389 GENE denotes PCSK9
T14 390-406 NEGREG denotes loss-of-function
T15 408-411 NEGREG denotes LOF
T16 413-422 VAR denotes mutations
T17 430-447 CPA denotes cardio-protective
T18 448-454 CPA denotes effect
T19 477-481 REG denotes lead
T20 482-484 REG denotes to
T21 485-517 DISEASE denotes familial hypobetalipoproteinemia
T22 519-523 DISEASE denotes FHBL
T23 631-636 GENE denotes PCSK9
T24 637-645 VAR denotes mutation
T25 776-790 GENE denotes PCSK9-mediated
T26 791-794 DISEASE denotes ADH
T27 799-803 DISEASE denotes FHBL
T28 1068-1071 DISEASE denotes ADH
T29 1093-1097 NEGREG denotes less
T30 1098-1103 GENE denotes PCSK9
T31 1149-1157 NEGREG denotes decrease
T32 1266-1270 DISEASE denotes FHBL
T33 1269-1273 DISEASE denotes L (H
T34 1308-1316 NEGREG denotes decrease
T35 1323-1328 GENE denotes K9 se
T36 1326-1335 MPA denotes secretion
T37 1369-1377 POSREG denotes increase
T38 1440-1448 POSREG denotes enhanced
T39 1449-1452 GENE denotes LDL
T40 1455-1467 GENE denotes ceptor (LDLR
T41 1463-1467 GENE denotes LDLR
T42 1469-1473 GENE denotes and
T43 1473-1478 GENE denotes PCSK9
T44 1479-1484 GENE denotes mRNA
T45 1489-1499 MPA denotes expression
T46 1518-1527 MPA denotes secretion
T47 1518-1523 GENE denotes secre
T48 1634-1642 POSREG denotes increase
T49 1646-1656 MPA denotes LDL uptake
T50 1820-1825 VAR denotes S127R
T51 2065-2070 GENE denotes PCSK9
T52 2071-2080 VAR denotes mutations
T53 2076-2081 GENE denotes ions
R0 T5 T8 ThemeOf PCSK9,mutations
R1 T7 T6 CauseOf GOF,gain-of-function
R2 T6 T9 CauseOf gain-of-function,associated
R3 T7 T9 CauseOf GOF,associated
R4 T8 T6 CauseOf mutations,gain-of-function
R5 T8 T7 CauseOf mutations,GOF
R6 T8 T9 CauseOf mutations,associated
R7 T8 T14 CauseOf mutations,loss-of-function
R8 T10 T6 ThemeOf autosomal dominant hypercholesterolemia,gain-of-function
R9 T10 T7 ThemeOf autosomal dominant hypercholesterolemia,GOF
R10 T10 T9 ThemeOf autosomal dominant hypercholesterolemia,associated
R11 T10 T14 ThemeOf autosomal dominant hypercholesterolemia,loss-of-function
R12 T10 T15 ThemeOf autosomal dominant hypercholesterolemia,LOF
R13 T11 T6 ThemeOf ADH,gain-of-function
R14 T11 T7 ThemeOf ADH,GOF
R15 T11 T9 ThemeOf ADH,associated
R16 T11 T14 ThemeOf ADH,loss-of-function
R17 T11 T15 ThemeOf ADH,LOF
R18 T12 T6 ThemeOf premature atherosclerosis,gain-of-function
R19 T12 T7 ThemeOf premature atherosclerosis,GOF
R20 T12 T9 ThemeOf premature atherosclerosis,associated
R21 T12 T14 ThemeOf premature atherosclerosis,loss-of-function
R22 T12 T15 ThemeOf premature atherosclerosis,LOF
R23 T13 T16 ThemeOf PCSK9,mutations
R24 T15 T14 CauseOf LOF,loss-of-function
R25 T17 T14 ThemeOf cardio-protective,loss-of-function
R26 T16 T6 CauseOf mutations,gain-of-function
R27 T16 T14 CauseOf mutations,loss-of-function
R28 T16 T15 CauseOf mutations,LOF
R29 T16 T17 CauseOf mutations,cardio-protective
R30 T16 T19 CauseOf mutations,lead
R31 T16 T20 CauseOf mutations,to
R32 T17 T18 ThemeOf cardio-protective,effect
R33 T21 T6 ThemeOf familial hypobetalipoproteinemia,gain-of-function
R34 T21 T7 ThemeOf familial hypobetalipoproteinemia,GOF
R35 T21 T14 ThemeOf familial hypobetalipoproteinemia,loss-of-function
R36 T21 T15 ThemeOf familial hypobetalipoproteinemia,LOF
R37 T21 T19 ThemeOf familial hypobetalipoproteinemia,lead
R38 T21 T20 ThemeOf familial hypobetalipoproteinemia,to
R39 T22 T6 ThemeOf FHBL,gain-of-function
R40 T22 T14 ThemeOf FHBL,loss-of-function
R41 T22 T15 ThemeOf FHBL,LOF
R42 T22 T19 ThemeOf FHBL,lead
R43 T22 T20 ThemeOf FHBL,to
R44 T23 T24 ThemeOf PCSK9,mutation
R45 T28 T29 ThemeOf ADH,less
R46 T28 T31 ThemeOf ADH,decrease
R47 T32 T29 ThemeOf FHBL,less
R48 T32 T31 ThemeOf FHBL,decrease
R49 T32 T34 ThemeOf FHBL,decrease
R50 T34 T37 CauseOf decrease,increase
R51 T36 T34 ThemeOf secretion,decrease
R52 T39 T38 ThemeOf LDL,enhanced
R53 T39 T45 ThemeOf LDL,expression
R54 T41 T38 ThemeOf LDLR,enhanced
R55 T41 T45 ThemeOf LDLR,expression
R56 T41 T46 ThemeOf LDLR,secretion
R57 T43 T38 ThemeOf PCSK9,enhanced
R58 T43 T45 ThemeOf PCSK9,expression
R59 T45 T38 ThemeOf expression,enhanced
R60 T46 T45 ThemeOf secretion,expression
R61 T46 T38 ThemeOf secretion,enhanced
R62 T49 T48 ThemeOf LDL uptake,increase
R63 T50 T48 CauseOf S127R,increase
R64 T51 T52 ThemeOf PCSK9,mutations

DisGeNET5_variant_disease

Id Subject Object Predicate Lexical cue
26586530-7#284#289#geners369067856 1276-1281 geners369067856 denotes R104C
26586530-7#290#295#geners775988212 1282-1287 geners775988212 denotes V114A
26586530-7#76#79#diseaseC1332347 1068-1071 diseaseC1332347 denotes ADH
26586530-7#81#90#diseaseC1332347 1073-1082 diseaseC1332347 denotes HLC-S127R
26586530-7#274#278#diseaseC1862596 1266-1270 diseaseC1862596 denotes FHBL
26586530-7#76#79#diseaseC1332347 1068-1071 diseaseC1332347 denotes ADH
26586530-7#81#90#diseaseC1332347 1073-1082 diseaseC1332347 denotes HLC-S127R
26586530-7#274#278#diseaseC1862596 1266-1270 diseaseC1862596 denotes FHBL
26586530-9#249#254#geners752942769 1820-1825 geners752942769 denotes S127R
26586530-9#249#254#geners762588484 1820-1825 geners762588484 denotes S127R
26586530-9#249#254#geners28942111 1820-1825 geners28942111 denotes S127R
26586530-9#105#114#diseaseC1332347 1678-1687 diseaseC1332347 denotes HLC-S127R
284#289#geners36906785676#79#diseaseC1332347 26586530-7#284#289#geners369067856 26586530-7#76#79#diseaseC1332347 associated_with R104C,ADH
284#289#geners36906785681#90#diseaseC1332347 26586530-7#284#289#geners369067856 26586530-7#81#90#diseaseC1332347 associated_with R104C,HLC-S127R
284#289#geners369067856274#278#diseaseC1862596 26586530-7#284#289#geners369067856 26586530-7#274#278#diseaseC1862596 associated_with R104C,FHBL
284#289#geners36906785676#79#diseaseC1332347 26586530-7#284#289#geners369067856 26586530-7#76#79#diseaseC1332347 associated_with R104C,ADH
284#289#geners36906785681#90#diseaseC1332347 26586530-7#284#289#geners369067856 26586530-7#81#90#diseaseC1332347 associated_with R104C,HLC-S127R
284#289#geners369067856274#278#diseaseC1862596 26586530-7#284#289#geners369067856 26586530-7#274#278#diseaseC1862596 associated_with R104C,FHBL
290#295#geners77598821276#79#diseaseC1332347 26586530-7#290#295#geners775988212 26586530-7#76#79#diseaseC1332347 associated_with V114A,ADH
290#295#geners77598821281#90#diseaseC1332347 26586530-7#290#295#geners775988212 26586530-7#81#90#diseaseC1332347 associated_with V114A,HLC-S127R
290#295#geners775988212274#278#diseaseC1862596 26586530-7#290#295#geners775988212 26586530-7#274#278#diseaseC1862596 associated_with V114A,FHBL
290#295#geners77598821276#79#diseaseC1332347 26586530-7#290#295#geners775988212 26586530-7#76#79#diseaseC1332347 associated_with V114A,ADH
290#295#geners77598821281#90#diseaseC1332347 26586530-7#290#295#geners775988212 26586530-7#81#90#diseaseC1332347 associated_with V114A,HLC-S127R
290#295#geners775988212274#278#diseaseC1862596 26586530-7#290#295#geners775988212 26586530-7#274#278#diseaseC1862596 associated_with V114A,FHBL
249#254#geners752942769105#114#diseaseC1332347 26586530-9#249#254#geners752942769 26586530-9#105#114#diseaseC1332347 associated_with S127R,HLC-S127R
249#254#geners762588484105#114#diseaseC1332347 26586530-9#249#254#geners762588484 26586530-9#105#114#diseaseC1332347 associated_with S127R,HLC-S127R
249#254#geners28942111105#114#diseaseC1332347 26586530-9#249#254#geners28942111 26586530-9#105#114#diseaseC1332347 associated_with S127R,HLC-S127R

DisGeNET5_gene_disease

Id Subject Object Predicate Lexical cue
26586530-0#78#83#gene255738 78-83 gene255738 denotes PCSK9
26586530-0#93#132#diseaseC0745103 93-132 diseaseC0745103 denotes autosomal dominant hypercholesterolemia
26586530-2#8#13#gene255738 248-253 gene255738 denotes PCSK9
26586530-2#127#142#diseaseC0003850 367-382 diseaseC0003850 denotes atherosclerosis
26586530-2#127#142#diseaseC0004153 367-382 diseaseC0004153 denotes atherosclerosis
26586530-7#106#111#gene255738 1098-1103 gene255738 denotes PCSK9
26586530-7#328#333#gene255738 1320-1325 gene255738 denotes PCSK9
26586530-7#76#79#diseaseC1332347 1068-1071 diseaseC1332347 denotes ADH
26586530-7#81#90#diseaseC1332347 1073-1082 diseaseC1332347 denotes HLC-S127R
26586530-7#274#278#diseaseC1862596 1266-1270 diseaseC1862596 denotes FHBL
26586530-7#76#79#diseaseC1332347 1068-1071 diseaseC1332347 denotes ADH
26586530-7#81#90#diseaseC1332347 1073-1082 diseaseC1332347 denotes HLC-S127R
26586530-7#274#278#diseaseC1862596 1266-1270 diseaseC1862596 denotes FHBL
78#83#gene25573893#132#diseaseC0745103 26586530-0#78#83#gene255738 26586530-0#93#132#diseaseC0745103 associated_with PCSK9,autosomal dominant hypercholesterolemia
8#13#gene255738127#142#diseaseC0003850 26586530-2#8#13#gene255738 26586530-2#127#142#diseaseC0003850 associated_with PCSK9,atherosclerosis
8#13#gene255738127#142#diseaseC0004153 26586530-2#8#13#gene255738 26586530-2#127#142#diseaseC0004153 associated_with PCSK9,atherosclerosis
106#111#gene25573876#79#diseaseC1332347 26586530-7#106#111#gene255738 26586530-7#76#79#diseaseC1332347 associated_with PCSK9,ADH
106#111#gene25573881#90#diseaseC1332347 26586530-7#106#111#gene255738 26586530-7#81#90#diseaseC1332347 associated_with PCSK9,HLC-S127R
106#111#gene255738274#278#diseaseC1862596 26586530-7#106#111#gene255738 26586530-7#274#278#diseaseC1862596 associated_with PCSK9,FHBL
106#111#gene25573876#79#diseaseC1332347 26586530-7#106#111#gene255738 26586530-7#76#79#diseaseC1332347 associated_with PCSK9,ADH
106#111#gene25573881#90#diseaseC1332347 26586530-7#106#111#gene255738 26586530-7#81#90#diseaseC1332347 associated_with PCSK9,HLC-S127R
106#111#gene255738274#278#diseaseC1862596 26586530-7#106#111#gene255738 26586530-7#274#278#diseaseC1862596 associated_with PCSK9,FHBL
328#333#gene25573876#79#diseaseC1332347 26586530-7#328#333#gene255738 26586530-7#76#79#diseaseC1332347 associated_with PCSK9,ADH
328#333#gene25573881#90#diseaseC1332347 26586530-7#328#333#gene255738 26586530-7#81#90#diseaseC1332347 associated_with PCSK9,HLC-S127R
328#333#gene255738274#278#diseaseC1862596 26586530-7#328#333#gene255738 26586530-7#274#278#diseaseC1862596 associated_with PCSK9,FHBL
328#333#gene25573876#79#diseaseC1332347 26586530-7#328#333#gene255738 26586530-7#76#79#diseaseC1332347 associated_with PCSK9,ADH
328#333#gene25573881#90#diseaseC1332347 26586530-7#328#333#gene255738 26586530-7#81#90#diseaseC1332347 associated_with PCSK9,HLC-S127R
328#333#gene255738274#278#diseaseC1862596 26586530-7#328#333#gene255738 26586530-7#274#278#diseaseC1862596 associated_with PCSK9,FHBL

kaiyin_test

Id Subject Object Predicate Lexical cue
T1 248-253 Gene denotes PCSK9
T2 254-270 PosReg denotes gain-of-function
T3 277-286 Var denotes mutations
T4 307-346 Disease denotes autosomal dominant hypercholesterolemia
T5 357-382 Disease denotes premature atherosclerosis
T6 384-389 Gene denotes PCSK9
T7 390-406 NegReg denotes loss-of-function
T8 413-422 Var denotes mutations
T9 423-427 PosReg denotes have
T10 430-454 CPA denotes cardio-protective effect
T11 485-517 Disease denotes familial hypobetalipoproteinemia
R1 T1 T3 ThemeOf PCSK9,mutations
R2 T3 T2 CauseOf mutations,gain-of-function
R3 T4 T2 ThemeOf autosomal dominant hypercholesterolemia,gain-of-function
R4 T5 T2 ThemeOf premature atherosclerosis,gain-of-function
R5 T6 T8 ThemeOf PCSK9,mutations
R6 T8 T7 CauseOf mutations,loss-of-function
R7 T11 T7 ThemeOf familial hypobetalipoproteinemia,loss-of-function
R8 T8 T9 CauseOf mutations,have
R9 T10 T9 ThemeOf cardio-protective effect,have

name_no

Id Subject Object Predicate Lexical cue
T1 248-253 Gene denotes PCSK9
T2 254-270 PosReg denotes gain-of-function
T3 277-286 Var denotes mutations
T4 307-346 Disease denotes autosomal dominant hypercholesterolemia
T5 357-382 Disease denotes premature atherosclerosis
T6 384-389 Gene denotes PCSK9
T7 390-406 NegReg denotes loss-of-function
T8 413-422 Var denotes mutations
T9 423-427 PosReg denotes have
T10 430-454 CPA denotes cardio-protective effect
T11 485-517 Disease denotes familial hypobetalipoproteinemia
R1 T1 T3 ThemeOf PCSK9,mutations
R2 T3 T2 CauseOf mutations,gain-of-function
R3 T4 T2 ThemeOf autosomal dominant hypercholesterolemia,gain-of-function
R4 T5 T2 ThemeOf premature atherosclerosis,gain-of-function
R5 T6 T8 ThemeOf PCSK9,mutations
R6 T8 T7 CauseOf mutations,loss-of-function
R7 T11 T7 ThemeOf familial hypobetalipoproteinemia,loss-of-function
R8 T8 T9 CauseOf mutations,have
R9 T10 T9 ThemeOf cardio-protective effect,have