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PubMed:26458744 JSONTXT

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pqqtest_sentence

Id Subject Object Predicate Lexical cue
M_0 1012-1023 WTO:0000011, funRiceGene:359 denotes development
M_1 387-398 funRiceGene:312, xzyao:28456 denotes grain yield
M_2 393-398 funRiceGene:377 denotes yield
M_3 619-624 funRiceGene:377 denotes yield
M_4 387-392 funRiceGene:91 denotes grain
M_5 701-718 xzyao:12780 denotes Genetic diversity
M_6 815-833 xzyao:44741 denotes tolerant varieties
M_7 1027-1048 xzyao:15433 denotes high-yielding drought
M_8 462-467 funRiceGene:135 denotes dwarf
M_9 1058-1063 funRiceGene:135 denotes dwarf
M_10 271-283 TO:0000207, funRiceGene:271, xzyao:3305 denotes plant height
M_11 468-480 TO:0000207, funRiceGene:271, xzyao:3305 denotes plant height
M_12 73-90 TO:0000276, funRiceGene:56, xzyao:34997 denotes drought tolerance
M_13 288-305 TO:0000276, funRiceGene:56, xzyao:34997 denotes drought tolerance
M_14 865-882 TO:0000276, funRiceGene:56, xzyao:34997 denotes drought tolerance
M_15 956-973 TO:0000276, funRiceGene:56, xzyao:34997 denotes drought tolerance
M_16 0-7 WTO:0000218, funRiceGene:356 denotes Drought
M_17 73-80 WTO:0000218, funRiceGene:356 denotes drought
M_18 185-192 WTO:0000218, funRiceGene:356 denotes drought
M_19 288-295 WTO:0000218, funRiceGene:356 denotes drought
M_20 405-412 WTO:0000218, funRiceGene:356 denotes drought
M_21 611-618 WTO:0000218, funRiceGene:356 denotes drought
M_22 807-814 WTO:0000218, funRiceGene:356 denotes drought
M_23 865-872 WTO:0000218, funRiceGene:356 denotes drought
M_24 956-963 WTO:0000218, funRiceGene:356 denotes drought
M_25 1041-1048 WTO:0000218, funRiceGene:356 denotes drought
M_26 1159-1166 WTO:0000218, funRiceGene:356 denotes drought
M_27 81-90 funRiceGene:214 denotes tolerance
M_28 296-305 funRiceGene:214 denotes tolerance
M_29 873-882 funRiceGene:214 denotes tolerance
M_30 964-973 funRiceGene:214 denotes tolerance
M_31 277-283 funRiceGene:501 denotes height
M_32 474-480 funRiceGene:501 denotes height
M_33 116-132 xzyao:40588 denotes Green Revolution
M_34 33-37 hunflair:NA:Species denotes rice
M_35 138-142 hunflair:NA:Species denotes rice
M_36 1173-1177 hunflair:NA:Species denotes rice
M_37 1041-1069 hunflair:NA:CellLine denotes drought-tolerant dwarf lines
M_38 134-136 hunflair:NA:Gene denotes GR
M_39 441-443 hunflair:NA:Gene denotes GR
M_40 539-541 hunflair:NA:Gene denotes GR
M_41 687-689 hunflair:NA:Gene denotes GR
M_42 766-768 hunflair:NA:Gene denotes GR
M_43 1153-1155 hunflair:NA:Gene denotes GR
M_44 449-452 hunflair:NA:Gene denotes sd1
M_45 593-596 hunflair:NA:Gene denotes sd1
M_46 33-37 pubtator:4530:Species denotes rice
M_47 138-142 pubtator:4530:Species denotes rice
M_48 1173-1177 pubtator:4530:Species denotes rice

21k_plant_trait_mention

Id Subject Object Predicate Lexical cue
M_0 873-882 funRiceGene:214 denotes tolerance
M_1 964-973 funRiceGene:214 denotes tolerance
M_2 277-283 funRiceGene:501 denotes height
M_3 387-398 funRiceGene:312, xzyao:11323 denotes grain yield
M_4 393-398 funRiceGene:377 denotes yield
M_5 1058-1063 funRiceGene:135 denotes dwarf
M_6 865-882 TO:0000276, funRiceGene:56, xzyao:15993 denotes drought tolerance
M_7 956-973 TO:0000276, funRiceGene:56, xzyao:15993 denotes drought tolerance
M_8 387-392 funRiceGene:91 denotes grain
M_9 271-283 TO:0000207, funRiceGene:271, xzyao:10195 denotes plant height
M_10 1012-1023 WTO:0000011, funRiceGene:359 denotes development
M_11 271-283 xzyao:5696 denotes plant height
M_12 271-283 xzyao:17229 denotes plant height
M_13 185-192 WTO:0000218, funRiceGene:356 denotes drought
M_14 288-295 WTO:0000218, funRiceGene:356 denotes drought
M_15 405-412 WTO:0000218, funRiceGene:356 denotes drought
M_16 865-872 WTO:0000218, funRiceGene:356 denotes drought
M_17 956-963 WTO:0000218, funRiceGene:356 denotes drought
M_18 449-452 hunflair:NA:Gene denotes sd1
M_19 593-596 hunflair:NA:Gene denotes sd1
M_20 33-37 hunflair:NA:Species denotes rice
M_21 138-142 hunflair:NA:Species denotes rice
M_22 1173-1177 hunflair:NA:Species denotes rice
M_23 1041-1069 hunflair:NA:CellLine denotes drought-tolerant dwarf lines
M_24 134-136 hunflair:NA:Gene denotes GR
M_25 441-443 hunflair:NA:Gene denotes GR
M_26 539-541 hunflair:NA:Gene denotes GR
M_27 687-689 hunflair:NA:Gene denotes GR
M_28 766-768 hunflair:NA:Gene denotes GR
M_29 1153-1155 hunflair:NA:Gene denotes GR
M_30 33-37 pubtator:4530:Species denotes rice
M_31 138-142 pubtator:4530:Species denotes rice
M_32 1173-1177 pubtator:4530:Species denotes rice

OryzaGP_2021

Id Subject Object Predicate Lexical cue
T1 271-283 http://identifiers.org/oryzabase.gene/8136 denotes plant height
T2 271-283 http://identifiers.org/oryzabase.gene/6364 denotes plant height
T3 271-283 http://identifiers.org/oryzabase.gene/11639 denotes plant height
T4 387-398 http://identifiers.org/oryzabase.gene/2034 denotes grain yield
T5 449-452 http://identifiers.org/oryzabase.gene/470 denotes sd1
T6 462-467 http://identifiers.org/oryzabase.gene/846 denotes dwarf
T7 462-467 http://identifiers.org/oryzabase.gene/3037 denotes dwarf
T8 468-480 http://identifiers.org/oryzabase.gene/8136 denotes plant height
T9 468-480 http://identifiers.org/oryzabase.gene/6364 denotes plant height
T10 468-480 http://identifiers.org/oryzabase.gene/11639 denotes plant height
T11 593-596 http://identifiers.org/oryzabase.gene/470 denotes sd1
T12 1058-1063 http://identifiers.org/oryzabase.gene/846 denotes dwarf
T13 1058-1063 http://identifiers.org/oryzabase.gene/3037 denotes dwarf
T98924 271-283 http://identifiers.org/ricegap/LOC_Os07g15770 denotes plant height
T76283 271-283 http://identifiers.org/ricegap/LOC_Os02g49880 denotes plant height
T52681 387-398 http://identifiers.org/ricegap/LOC_Os08g07740 denotes grain yield
T66612 449-452 http://identifiers.org/ricegap/LOC_Os01g66100 denotes sd1
T69206 462-467 http://identifiers.org/ricegap/LOC_Os03g40540 denotes dwarf
T38346 468-480 http://identifiers.org/ricegap/LOC_Os07g15770 denotes plant height
T3739 468-480 http://identifiers.org/ricegap/LOC_Os02g49880 denotes plant height
T69165 593-596 http://identifiers.org/ricegap/LOC_Os01g66100 denotes sd1
T83931 1058-1063 http://identifiers.org/ricegap/LOC_Os03g40540 denotes dwarf
T6836 271-283 http://identifiers.org/rapdb.locus/Os07g0261200 denotes plant height
T59858 271-283 http://identifiers.org/rapdb.locus/Os02g0731700 denotes plant height
T18945 387-398 http://identifiers.org/rapdb.locus/Os08g0174500 denotes grain yield
T97063 449-452 http://identifiers.org/rapdb.locus/Os01g0883800 denotes sd1
T84537 462-467 http://identifiers.org/rapdb.locus/Os03g0602300 denotes dwarf
T96500 468-480 http://identifiers.org/rapdb.locus/Os07g0261200 denotes plant height
T79032 468-480 http://identifiers.org/rapdb.locus/Os02g0731700 denotes plant height
T52240 593-596 http://identifiers.org/rapdb.locus/Os01g0883800 denotes sd1
T40874 1058-1063 http://identifiers.org/rapdb.locus/Os03g0602300 denotes dwarf
T24172 271-283 http://identifiers.org/uniprot/Q6Z2L0 denotes plant height
T38267 271-283 http://identifiers.org/uniprot/G3GJX4 denotes plant height
T29151 271-283 http://identifiers.org/uniprot/B2KYD3 denotes plant height
T857 449-452 http://identifiers.org/uniprot/Q0JH50 denotes sd1
T80019 449-452 http://identifiers.org/uniprot/B6F2D9 denotes sd1
T24703 468-480 http://identifiers.org/uniprot/Q6Z2L0 denotes plant height
T70552 468-480 http://identifiers.org/uniprot/G3GJX4 denotes plant height
T17817 468-480 http://identifiers.org/uniprot/B2KYD3 denotes plant height
T95211 593-596 http://identifiers.org/uniprot/Q0JH50 denotes sd1
T66183 593-596 http://identifiers.org/uniprot/B6F2D9 denotes sd1
M_0 1041-1069 hunflair:NA:CellLine denotes drought-tolerant dwarf lines
M_1 134-136 hunflair:NA:Gene denotes GR
M_2 441-443 hunflair:NA:Gene denotes GR
M_3 539-541 hunflair:NA:Gene denotes GR
M_4 687-689 hunflair:NA:Gene denotes GR
M_5 766-768 hunflair:NA:Gene denotes GR
M_6 1153-1155 hunflair:NA:Gene denotes GR
M_7 449-452 hunflair:NA:Gene denotes sd1
M_8 593-596 hunflair:NA:Gene denotes sd1
M_9 33-37 hunflair:NA:Species denotes rice
M_10 138-142 hunflair:NA:Species denotes rice
M_11 1173-1177 hunflair:NA:Species denotes rice

OryzaGP_2022

Id Subject Object Predicate Lexical cue
T1 271-283 http://identifiers.org/oryzabase.gene/6364 denotes plant height
T2 462-467 http://identifiers.org/oryzabase.gene/846 denotes dwarf
T3 468-480 http://identifiers.org/oryzabase.gene/6364 denotes plant height
T4 1058-1063 http://identifiers.org/oryzabase.gene/846 denotes dwarf

OryzaGP_2021_v2

Id Subject Object Predicate Lexical cue
T1 449-452 http://identifiers.org/oryzabase.gene/470 denotes sd1
T2 593-596 http://identifiers.org/oryzabase.gene/470 denotes sd1
T2639 449-452 http://identifiers.org/rapdb.locus/Os01g0883800 denotes sd1
T4527 593-596 http://identifiers.org/rapdb.locus/Os01g0883800 denotes sd1

OryzaGP_2021_FLAIR

Id Subject Object Predicate Lexical cue
M_0 1041-1069 hunflair:NA:CellLine denotes drought-tolerant dwarf lines
M_1 134-136 hunflair:NA:Gene denotes GR
M_2 441-443 hunflair:NA:Gene denotes GR
M_3 539-541 hunflair:NA:Gene denotes GR
M_4 687-689 hunflair:NA:Gene denotes GR
M_5 766-768 hunflair:NA:Gene denotes GR
M_6 1153-1155 hunflair:NA:Gene denotes GR
M_7 449-452 hunflair:NA:Gene denotes sd1
M_8 593-596 hunflair:NA:Gene denotes sd1
M_9 33-37 hunflair:NA:Species denotes rice
M_10 138-142 hunflair:NA:Species denotes rice
M_11 1173-1177 hunflair:NA:Species denotes rice

funRiceGenes-all

Id Subject Object Predicate Lexical cue
PTO-all_T1 0-22 http://purl.obolibrary.org/obo/TO_0000188 denotes Drought susceptibility
PTO-all_T2 73-90 http://purl.obolibrary.org/obo/TO_0000276 denotes drought tolerance
PTO-all_T3 185-202 http://purl.obolibrary.org/obo/TO_0000188 denotes drought sensitive
PTO-all_T4 271-283 http://purl.obolibrary.org/obo/TO_0000207 denotes plant height
PTO-all_T5 288-305 http://purl.obolibrary.org/obo/TO_0000276 denotes drought tolerance
PTO-all_T6 468-480 http://purl.obolibrary.org/obo/TO_0000207 denotes plant height
PTO-all_T7 807-823 http://purl.obolibrary.org/obo/TO_0000276 denotes drought-tolerant
PTO-all_T8 865-882 http://purl.obolibrary.org/obo/TO_0000276 denotes drought tolerance
PTO-all_T9 956-973 http://purl.obolibrary.org/obo/TO_0000276 denotes drought tolerance
PTO-all_T10 1041-1057 http://purl.obolibrary.org/obo/TO_0000276 denotes drought-tolerant

funRiceGenes-exact

Id Subject Object Predicate Lexical cue
PTO-exact_T1 73-90 http://purl.obolibrary.org/obo/TO_0000276 denotes drought tolerance
PTO-exact_T2 185-202 http://purl.obolibrary.org/obo/TO_0000188 denotes drought sensitive
PTO-exact_T3 271-283 http://purl.obolibrary.org/obo/TO_0000207 denotes plant height
PTO-exact_T4 288-305 http://purl.obolibrary.org/obo/TO_0000276 denotes drought tolerance
PTO-exact_T5 468-480 http://purl.obolibrary.org/obo/TO_0000207 denotes plant height
PTO-exact_T6 807-823 http://purl.obolibrary.org/obo/TO_0000276 denotes drought-tolerant
PTO-exact_T7 865-882 http://purl.obolibrary.org/obo/TO_0000276 denotes drought tolerance
PTO-exact_T8 956-973 http://purl.obolibrary.org/obo/TO_0000276 denotes drought tolerance
PTO-exact_T9 1041-1057 http://purl.obolibrary.org/obo/TO_0000276 denotes drought-tolerant

OryzaGP

Id Subject Object Predicate Lexical cue
T1 449-452 gene denotes sd1
T2 593-596 gene denotes sd1

Oryza_sentences

Id Subject Object Predicate Lexical cue
T1 0-115 Sentence denotes Drought susceptibility of modern rice varieties: an effect of linkage of drought tolerance with undesirable traits.
T2 116-203 Sentence denotes Green Revolution (GR) rice varieties are high yielding but typically drought sensitive.
T3 204-306 Sentence denotes This is partly due to the tight linkage between the loci governing plant height and drought tolerance.
T4 307-481 Sentence denotes This linkage is illustrated here through characterization of qDTY1.1, a QTL for grain yield under drought that co-segregates with the GR gene sd1 for semi-dwarf plant height.
T5 482-604 Sentence denotes We report that the loss of the qDTY1.1 allele during the GR was due to its tight linkage in repulsion with the sd1 allele.
T6 605-700 Sentence denotes Other drought-yield QTLs (qDTY) also showed tight linkage with traits rejected in GR varieties.
T7 701-891 Sentence denotes Genetic diversity analysis for 11 different qDTY regions grouped GR varieties separately from traditional drought-tolerant varieties, and showed lower frequency of drought tolerance alleles.
T8 892-1194 Sentence denotes The increased understanding and breaking of the linkage between drought tolerance and undesirable traits has led to the development of high-yielding drought-tolerant dwarf lines with positive qDTY alleles and provides new hope for extending the benefits of the GR to drought-prone rice-growing regions.

NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T1 33-37 OrganismTaxon denotes rice 4530
T2 138-142 OrganismTaxon denotes rice 4530
T3 1173-1177 OrganismTaxon denotes rice 4530