PubMed:26362868 / 0-184
Annnotations
Glycan-Motif
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 60-63 | https://glytoucan.org/Structures/Glycans/G56516VH | denotes | GM3 |
| T2 | 60-63 | https://glytoucan.org/Structures/Glycans/G91237TK | denotes | GM3 |
| T3 | 64-67 | https://glytoucan.org/Structures/Glycans/G30207PZ | denotes | GM4 |
| T4 | 64-67 | https://glytoucan.org/Structures/Glycans/G77824XV | denotes | GM4 |
| T5 | 94-97 | https://glytoucan.org/Structures/Glycans/G61168WC | denotes | GM2 |
| T6 | 94-97 | https://glytoucan.org/Structures/Glycans/G79389NT | denotes | GM2 |
| T7 | 98-101 | https://glytoucan.org/Structures/Glycans/G02657AK | denotes | GD2 |
| T8 | 98-101 | https://glytoucan.org/Structures/Glycans/G41759HA | denotes | GD2 |
GlyCosmos600-Glycan-Motif-Structure
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 60-63 | https://glytoucan.org/Structures/Glycans/G91237TK | denotes | GM3 |
| T2 | 60-63 | https://glytoucan.org/Structures/Glycans/G56516VH | denotes | GM3 |
| T3 | 64-67 | https://glytoucan.org/Structures/Glycans/G77824XV | denotes | GM4 |
| T4 | 64-67 | https://glytoucan.org/Structures/Glycans/G30207PZ | denotes | GM4 |
| T5 | 94-97 | https://glytoucan.org/Structures/Glycans/G79389NT | denotes | GM2 |
| T6 | 94-97 | https://glytoucan.org/Structures/Glycans/G61168WC | denotes | GM2 |
| T7 | 98-101 | https://glytoucan.org/Structures/Glycans/G41759HA | denotes | GD2 |
| T8 | 98-101 | https://glytoucan.org/Structures/Glycans/G02657AK | denotes | GD2 |
GlyCosmos600-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 94-97 | http://purl.obolibrary.org/obo/CLO_0003535 | denotes | GM2 |
GlyCosmos6-Glycan-Motif-Image
| Id | Subject | Object | Predicate | Lexical cue | image |
|---|---|---|---|---|---|
| T1 | 60-63 | Glycan_Motif | denotes | GM3 | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G91237TK|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G56516VH |
| T3 | 64-67 | Glycan_Motif | denotes | GM4 | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G77824XV|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G30207PZ |
| T5 | 94-97 | Glycan_Motif | denotes | GM2 | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G79389NT|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G61168WC |
| T7 | 98-101 | Glycan_Motif | denotes | GD2 | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G41759HA|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G02657AK |
GlyCosmos6-Glycan-Motif-Structure
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 60-63 | https://glytoucan.org/Structures/Glycans/G56516VH | denotes | GM3 |
| T2 | 60-63 | https://glytoucan.org/Structures/Glycans/G91237TK | denotes | GM3 |
| T3 | 64-67 | https://glytoucan.org/Structures/Glycans/G30207PZ | denotes | GM4 |
| T4 | 64-67 | https://glytoucan.org/Structures/Glycans/G77824XV | denotes | GM4 |
| T5 | 94-97 | https://glytoucan.org/Structures/Glycans/G61168WC | denotes | GM2 |
| T6 | 94-97 | https://glytoucan.org/Structures/Glycans/G79389NT | denotes | GM2 |
| T7 | 98-101 | https://glytoucan.org/Structures/Glycans/G02657AK | denotes | GD2 |
| T8 | 98-101 | https://glytoucan.org/Structures/Glycans/G41759HA | denotes | GD2 |
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| TextSentencer_T1 | 0-184 | Sentence | denotes | The regulation of ER export and Golgi retention of ST3Gal5 (GM3/GM4 synthase) and B4GalNAcT1 (GM2/GD2/GA2 synthase) by arginine/lysine-based motif adjacent to the transmembrane domain. |
| T1 | 0-184 | Sentence | denotes | The regulation of ER export and Golgi retention of ST3Gal5 (GM3/GM4 synthase) and B4GalNAcT1 (GM2/GD2/GA2 synthase) by arginine/lysine-based motif adjacent to the transmembrane domain. |
Glycosmos6-GlycoEpitope
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 64-67 | http://www.glycoepitope.jp/epitopes/EP0055 | denotes | GM4 |
Glycan-GlyCosmos
| Id | Subject | Object | Predicate | Lexical cue | image |
|---|---|---|---|---|---|
| T1 | 60-63 | Glycan | denotes | GM3 | https://api.glycosmos.org/wurcs2image/latest/png/binary/G91237TK |
| T2 | 64-67 | Glycan | denotes | GM4 | https://api.glycosmos.org/wurcs2image/latest/png/binary/G30207PZ |
| T3 | 94-97 | Glycan | denotes | GM2 | https://api.glycosmos.org/wurcs2image/latest/png/binary/G79389NT |
| T4 | 98-101 | Glycan | denotes | GD2 | https://api.glycosmos.org/wurcs2image/latest/png/binary/G02657AK |
| T5 | 102-105 | Glycan | denotes | GA2 | https://api.glycosmos.org/wurcs2image/latest/png/binary/G90562PB |
GlycoBiology-FMA
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| _T1 | 119-127 | FMAID:82763 | denotes | arginine |
| _T2 | 119-127 | FMAID:196752 | denotes | arginine |
| _T3 | 128-134 | FMAID:196747 | denotes | lysine |
| _T4 | 128-134 | FMAID:82758 | denotes | lysine |
uniprot-human
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 18-20 | http://www.uniprot.org/uniprot/P03372 | denotes | ER |
| T9 | 94-114 | http://www.uniprot.org/uniprot/Q00973 | denotes | GM2/GD2/GA2 synthase |
uniprot-mouse
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 18-20 | http://www.uniprot.org/uniprot/P19785 | denotes | ER |
GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 4-14 | http://purl.obolibrary.org/obo/GO_0065007 | denotes | regulation |
| T2 | 38-47 | http://purl.obolibrary.org/obo/GO_0051235 | denotes | retention |
GO-CC
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 18-20 | http://purl.obolibrary.org/obo/GO_0005783 | denotes | ER |
| T9 | 32-37 | http://purl.obolibrary.org/obo/GO_0005794 | denotes | Golgi |
| T17 | 163-176 | http://purl.obolibrary.org/obo/GO_0016021 | denotes | transmembrane |
| T18 | 163-176 | http://purl.obolibrary.org/obo/GO_0044214 | denotes | transmembrane |
GlyCosmos600-FMA
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T1 | 18-20 | Body_part | denotes | ER | http://purl.org/sig/ont/fma/fma63842 |
| T2 | 119-127 | Body_part | denotes | arginine | http://purl.org/sig/ont/fma/fma82763 |
| T3 | 128-134 | Body_part | denotes | lysine | http://purl.org/sig/ont/fma/fma82758 |
GlyCosmos600-GlycoGenes2
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 51-58 | https://acgg.asia/db/ggdb/info/gg052 | denotes | ST3Gal5 |
| T2 | 60-76 | https://acgg.asia/db/ggdb/info/gg052 | denotes | GM3/GM4 synthase |
| T3 | 82-92 | https://acgg.asia/db/ggdb/info/gg104 | denotes | B4GalNAcT1 |
| T4 | 94-114 | https://acgg.asia/db/ggdb/info/gg104 | denotes | GM2/GD2/GA2 synthase |
GlyCosmos600-GlycoGenes
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| PD-GlycoGenes-B_T1 | 51-58 | GGDB:ST3GAL5 | denotes | ST3Gal5 |
glycosmos-test-glycan-structure
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| PD-GlycanStructures-B_T1 | 60-63 | http://rdf.glyconavi.org/CarTNa/CarTNa15/trivialname | denotes | GM3 |
| PD-GlycanStructures-B_T2 | 60-63 | http://rdf.glyconavi.org/CarTNa/CarTNa50/trivialname | denotes | GM3 |
| PD-GlycanStructures-B_T3 | 94-97 | http://rdf.glyconavi.org/CarTNa/CarTNa102/trivialname | denotes | GM2 |
| PD-GlycanStructures-B_T4 | 94-97 | http://rdf.glyconavi.org/CarTNa/CarTNa14/trivialname | denotes | GM2 |
| PD-GlycanStructures-B_T5 | 98-101 | http://rdf.glyconavi.org/CarTNa/CarTNa107/trivialname | denotes | GD2 |
glycosmos-test-structure-v1
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| PD-GlycanStructures-B_T1 | 60-63 | http://rdf.glyconavi.org/CarTNa/CarTNa15/trivialname | denotes | GM3 |
| PD-GlycanStructures-B_T2 | 60-63 | http://rdf.glyconavi.org/CarTNa/CarTNa50/trivialname | denotes | GM3 |
| PD-GlycanStructures-B_T3 | 94-97 | http://rdf.glyconavi.org/CarTNa/CarTNa102/trivialname | denotes | GM2 |
| PD-GlycanStructures-B_T4 | 94-97 | http://rdf.glyconavi.org/CarTNa/CarTNa14/trivialname | denotes | GM2 |
| PD-GlycanStructures-B_T5 | 98-101 | http://rdf.glyconavi.org/CarTNa/CarTNa107/trivialname | denotes | GD2 |
GlyCosmos600-GlycoProteins
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| PD-GlycoProteins-B_T16 | 18-20 | http://purl.uniprot.org/uniprot/P03372 | denotes | ER |
| PD-GlycoProteins-B_T24 | 18-20 | http://purl.uniprot.org/uniprot/P16058 | denotes | ER |
| PD-GlycoProteins-B_T32 | 18-20 | http://purl.uniprot.org/uniprot/Q9YHZ7 | denotes | ER |
GlyCosmos600-GlycoEpitope
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| PD-GlycoEpitope-B_T1 | 64-67 | http://www.glycoepitope.jp/epitopes/EP0055 | denotes | GM4 |
| PD-GlycoEpitope-B_T2 | 98-101 | http://www.glycoepitope.jp/epitopes/EP0061 | denotes | GD2 |
pubmed-enju-pas
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| EnjuParser_T0 | 0-3 | DT | denotes | The |
| EnjuParser_T1 | 4-14 | NN | denotes | regulation |
| EnjuParser_T2 | 15-17 | IN | denotes | of |
| EnjuParser_T3 | 18-20 | NN | denotes | ER |
| EnjuParser_T4 | 21-27 | NN | denotes | export |
| EnjuParser_T5 | 28-31 | CC | denotes | and |
| EnjuParser_T6 | 32-37 | NNP | denotes | Golgi |
| EnjuParser_T7 | 38-47 | NN | denotes | retention |
| EnjuParser_T8 | 48-50 | IN | denotes | of |
| EnjuParser_T9 | 51-58 | NN | denotes | ST3Gal5 |
| EnjuParser_T10 | 59-60 | -LRB- | denotes | ( |
| EnjuParser_T11 | 60-67 | NN | denotes | GM3/GM4 |
| EnjuParser_T12 | 68-76 | NN | denotes | synthase |
| EnjuParser_T13 | 76-77 | -RRB- | denotes | ) |
| EnjuParser_T14 | 78-81 | CC | denotes | and |
| EnjuParser_T15 | 82-92 | NN | denotes | B4GalNAcT1 |
| EnjuParser_T16 | 93-94 | -LRB- | denotes | ( |
| EnjuParser_T17 | 94-105 | NN | denotes | GM2/GD2/GA2 |
| EnjuParser_T18 | 106-114 | NN | denotes | synthase |
| EnjuParser_T19 | 114-115 | -RRB- | denotes | ) |
| EnjuParser_T20 | 116-118 | IN | denotes | by |
| EnjuParser_T21 | 119-140 | JJ | denotes | arginine/lysine-based |
| EnjuParser_T22 | 141-146 | NN | denotes | motif |
| EnjuParser_T23 | 147-155 | JJ | denotes | adjacent |
| EnjuParser_T24 | 156-158 | TO | denotes | to |
| EnjuParser_T25 | 159-162 | DT | denotes | the |
| EnjuParser_T26 | 163-176 | JJ | denotes | transmembrane |
| EnjuParser_T27 | 177-183 | NN | denotes | domain |
| EnjuParser_R0 | EnjuParser_T1 | EnjuParser_T0 | arg1Of | regulation,The |
| EnjuParser_R1 | EnjuParser_T1 | EnjuParser_T2 | arg1Of | regulation,of |
| EnjuParser_R2 | EnjuParser_T7 | EnjuParser_T2 | arg2Of | retention,of |
| EnjuParser_R3 | EnjuParser_T7 | EnjuParser_T3 | arg1Of | retention,ER |
| EnjuParser_R4 | EnjuParser_T7 | EnjuParser_T4 | arg1Of | retention,export |
| EnjuParser_R5 | EnjuParser_T4 | EnjuParser_T5 | arg1Of | export,and |
| EnjuParser_R6 | EnjuParser_T6 | EnjuParser_T5 | arg2Of | Golgi,and |
| EnjuParser_R7 | EnjuParser_T7 | EnjuParser_T6 | arg1Of | retention,Golgi |
| EnjuParser_R8 | EnjuParser_T7 | EnjuParser_T8 | arg1Of | retention,of |
| EnjuParser_R9 | EnjuParser_T14 | EnjuParser_T8 | arg2Of | and,of |
| EnjuParser_R10 | EnjuParser_T9 | EnjuParser_T10 | arg1Of | ST3Gal5,( |
| EnjuParser_R11 | EnjuParser_T12 | EnjuParser_T10 | arg2Of | synthase,( |
| EnjuParser_R12 | EnjuParser_T13 | EnjuParser_T10 | arg3Of | ),( |
| EnjuParser_R13 | EnjuParser_T12 | EnjuParser_T11 | arg1Of | synthase,GM3/GM4 |
| EnjuParser_R14 | EnjuParser_T9 | EnjuParser_T14 | arg1Of | ST3Gal5,and |
| EnjuParser_R15 | EnjuParser_T15 | EnjuParser_T14 | arg2Of | B4GalNAcT1,and |
| EnjuParser_R16 | EnjuParser_T15 | EnjuParser_T16 | arg1Of | B4GalNAcT1,( |
| EnjuParser_R17 | EnjuParser_T18 | EnjuParser_T16 | arg2Of | synthase,( |
| EnjuParser_R18 | EnjuParser_T19 | EnjuParser_T16 | arg3Of | ),( |
| EnjuParser_R19 | EnjuParser_T18 | EnjuParser_T17 | arg1Of | synthase,GM2/GD2/GA2 |
| EnjuParser_R20 | EnjuParser_T7 | EnjuParser_T20 | arg1Of | retention,by |
| EnjuParser_R21 | EnjuParser_T22 | EnjuParser_T20 | arg2Of | motif,by |
| EnjuParser_R22 | EnjuParser_T22 | EnjuParser_T21 | arg1Of | motif,arginine/lysine-based |
| EnjuParser_R23 | EnjuParser_T22 | EnjuParser_T23 | arg1Of | motif,adjacent |
| EnjuParser_R24 | EnjuParser_T23 | EnjuParser_T24 | arg1Of | adjacent,to |
| EnjuParser_R25 | EnjuParser_T27 | EnjuParser_T24 | arg2Of | domain,to |
| EnjuParser_R26 | EnjuParser_T27 | EnjuParser_T25 | arg1Of | domain,the |
| EnjuParser_R27 | EnjuParser_T27 | EnjuParser_T26 | arg1Of | domain,transmembrane |
GlycoBiology-Epitope
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| PD-GlycoEpitope-B_T1 | 98-101 | http://www.glycoepitope.jp/epitopes/EP0061 | denotes | GD2 |
| PD-GlycoEpitope-B_T2 | 64-67 | http://www.glycoepitope.jp/epitopes/EP0055 | denotes | GM4 |
GlyCosmos-GlycoEpitope
| Id | Subject | Object | Predicate | Lexical cue | glycoepitope_id |
|---|---|---|---|---|---|
| T1 | 64-67 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | GM4 | http://www.glycoepitope.jp/epitopes/EP0055 |
GlyCosmos15-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T1 | 32-37 | Body_part | denotes | Golgi | http://purl.obolibrary.org/obo/GO_0005794 |
| T2 | 163-176 | Body_part | denotes | transmembrane | http://purl.obolibrary.org/obo/GO_0016020 |
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| TextSentencer_T1 | 0-184 | Sentence | denotes | The regulation of ER export and Golgi retention of ST3Gal5 (GM3/GM4 synthase) and B4GalNAcT1 (GM2/GD2/GA2 synthase) by arginine/lysine-based motif adjacent to the transmembrane domain. |
| T1 | 0-184 | Sentence | denotes | The regulation of ER export and Golgi retention of ST3Gal5 (GM3/GM4 synthase) and B4GalNAcT1 (GM2/GD2/GA2 synthase) by arginine/lysine-based motif adjacent to the transmembrane domain. |
GlyCosmos15-Sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-184 | Sentence | denotes | The regulation of ER export and Golgi retention of ST3Gal5 (GM3/GM4 synthase) and B4GalNAcT1 (GM2/GD2/GA2 synthase) by arginine/lysine-based motif adjacent to the transmembrane domain. |
GlyCosmos15-Glycan
| Id | Subject | Object | Predicate | Lexical cue | image |
|---|---|---|---|---|---|
| T1 | 60-63 | Glycan | denotes | GM3 | https://api.glycosmos.org/wurcs2image/latest/png/binary/G91237TK |
| T2 | 64-67 | Glycan | denotes | GM4 | https://api.glycosmos.org/wurcs2image/latest/png/binary/G30207PZ |
| T3 | 94-97 | Glycan | denotes | GM2 | https://api.glycosmos.org/wurcs2image/latest/png/binary/G79389NT |
| T4 | 98-101 | Glycan | denotes | GD2 | https://api.glycosmos.org/wurcs2image/latest/png/binary/G02657AK |
| T5 | 102-105 | Glycan | denotes | GA2 | https://api.glycosmos.org/wurcs2image/latest/png/binary/G90562PB |
GlyCosmos15-GlycoEpitope
| Id | Subject | Object | Predicate | Lexical cue | glycoepitope_id |
|---|---|---|---|---|---|
| T1 | 64-67 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | GM4 | http://www.glycoepitope.jp/epitopes/EP0055 |
Anatomy-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T1 | 32-37 | Body_part | denotes | Golgi | http://purl.obolibrary.org/obo/GO_0005794 |
| T2 | 163-176 | Body_part | denotes | transmembrane | http://purl.obolibrary.org/obo/GO_0016020 |