PubMed:26347523
Annnotations
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| TextSentencer_T1 | 0-170 | Sentence | denotes | Molecular mechanism of anticancer effect of Sclerotium rolfsii lectin in HT29 cells involves differential expression of genes associated with multiple signaling pathways: |
| TextSentencer_T2 | 171-193 | Sentence | denotes | A microarray analysis. |
| TextSentencer_T3 | 194-457 | Sentence | denotes | Sclerotium rolfsii lectin (SRL) is a lectin isolated from fungus S. rolfsii and has high binding specificity toward the oncofetal Thomsen-Friedenreich carbohydrate antigen (Galβ1-3GalNAc-α-O-Ser/Thr, T or TF), which is expressed in more than 90% of human cancers. |
| TextSentencer_T4 | 458-626 | Sentence | denotes | Our previous studies have shown that binding of SRL to human colon, breast and ovarian cancer cells induces cell apoptosis in vitro and suppresses tumor growth in vivo. |
| TextSentencer_T5 | 627-746 | Sentence | denotes | This study investigated the SRL-mediated cell signaling in human colon cancer HT29 cells by mRNA and miRNA microarrays. |
| TextSentencer_T6 | 747-997 | Sentence | denotes | It was found that SRL treatment results in altered expression of several hundred molecules including mitogen-activated protein kinase (MAPK) and c-JUN-associated, apoptosis-associated and cell cycle and DNA replication-associated signaling molecules. |
| TextSentencer_T7 | 998-1259 | Sentence | denotes | Pathway analysis using GeneSpring 12.6.1 revealed that SRL treatment induces changes of MAPK and c-JUN-associated signaling pathways as early as 2 h while changes of cell cycle, DNA replication and apoptosis pathways were significantly affected only after 24 h. |
| TextSentencer_T8 | 1260-1367 | Sentence | denotes | A significant change of cell miRNA expression was also observed after 12 h treatment of the cells with SRL. |
| TextSentencer_T9 | 1368-1476 | Sentence | denotes | These changes were further validated by quantitative real time polymerase chain reaction and immunoblotting. |
| TextSentencer_T10 | 1477-1718 | Sentence | denotes | This study thus suggests that the presence of SRL affects multiple signaling pathways in cancer cells with early effects on cell proliferation pathways associated with MAPK and c-JUN, followed by miRNA-associated cell activity and apoptosis. |
| TextSentencer_T11 | 1719-1831 | Sentence | denotes | This provides insight information into the molecular mechanism of the anticancer activity of this fungal lectin. |
| T1 | 0-193 | Sentence | denotes | Molecular mechanism of anticancer effect of Sclerotium rolfsii lectin in HT29 cells involves differential expression of genes associated with multiple signaling pathways: A microarray analysis. |
| T2 | 194-457 | Sentence | denotes | Sclerotium rolfsii lectin (SRL) is a lectin isolated from fungus S. rolfsii and has high binding specificity toward the oncofetal Thomsen-Friedenreich carbohydrate antigen (Galβ1-3GalNAc-α-O-Ser/Thr, T or TF), which is expressed in more than 90% of human cancers. |
| T3 | 458-626 | Sentence | denotes | Our previous studies have shown that binding of SRL to human colon, breast and ovarian cancer cells induces cell apoptosis in vitro and suppresses tumor growth in vivo. |
| T4 | 627-746 | Sentence | denotes | This study investigated the SRL-mediated cell signaling in human colon cancer HT29 cells by mRNA and miRNA microarrays. |
| T5 | 747-997 | Sentence | denotes | It was found that SRL treatment results in altered expression of several hundred molecules including mitogen-activated protein kinase (MAPK) and c-JUN-associated, apoptosis-associated and cell cycle and DNA replication-associated signaling molecules. |
| T6 | 998-1259 | Sentence | denotes | Pathway analysis using GeneSpring 12.6.1 revealed that SRL treatment induces changes of MAPK and c-JUN-associated signaling pathways as early as 2 h while changes of cell cycle, DNA replication and apoptosis pathways were significantly affected only after 24 h. |
| T7 | 1260-1367 | Sentence | denotes | A significant change of cell miRNA expression was also observed after 12 h treatment of the cells with SRL. |
| T8 | 1368-1476 | Sentence | denotes | These changes were further validated by quantitative real time polymerase chain reaction and immunoblotting. |
| T9 | 1477-1718 | Sentence | denotes | This study thus suggests that the presence of SRL affects multiple signaling pathways in cancer cells with early effects on cell proliferation pathways associated with MAPK and c-JUN, followed by miRNA-associated cell activity and apoptosis. |
| T10 | 1719-1831 | Sentence | denotes | This provides insight information into the molecular mechanism of the anticancer activity of this fungal lectin. |
| T1 | 0-170 | Sentence | denotes | Molecular mechanism of anticancer effect of Sclerotium rolfsii lectin in HT29 cells involves differential expression of genes associated with multiple signaling pathways: |
| T2 | 171-193 | Sentence | denotes | A microarray analysis. |
| T3 | 194-457 | Sentence | denotes | Sclerotium rolfsii lectin (SRL) is a lectin isolated from fungus S. rolfsii and has high binding specificity toward the oncofetal Thomsen-Friedenreich carbohydrate antigen (Galβ1-3GalNAc-α-O-Ser/Thr, T or TF), which is expressed in more than 90% of human cancers. |
| T4 | 458-626 | Sentence | denotes | Our previous studies have shown that binding of SRL to human colon, breast and ovarian cancer cells induces cell apoptosis in vitro and suppresses tumor growth in vivo. |
| T5 | 627-746 | Sentence | denotes | This study investigated the SRL-mediated cell signaling in human colon cancer HT29 cells by mRNA and miRNA microarrays. |
| T6 | 747-997 | Sentence | denotes | It was found that SRL treatment results in altered expression of several hundred molecules including mitogen-activated protein kinase (MAPK) and c-JUN-associated, apoptosis-associated and cell cycle and DNA replication-associated signaling molecules. |
| T7 | 998-1259 | Sentence | denotes | Pathway analysis using GeneSpring 12.6.1 revealed that SRL treatment induces changes of MAPK and c-JUN-associated signaling pathways as early as 2 h while changes of cell cycle, DNA replication and apoptosis pathways were significantly affected only after 24 h. |
| T8 | 1260-1367 | Sentence | denotes | A significant change of cell miRNA expression was also observed after 12 h treatment of the cells with SRL. |
| T9 | 1368-1476 | Sentence | denotes | These changes were further validated by quantitative real time polymerase chain reaction and immunoblotting. |
| T10 | 1477-1718 | Sentence | denotes | This study thus suggests that the presence of SRL affects multiple signaling pathways in cancer cells with early effects on cell proliferation pathways associated with MAPK and c-JUN, followed by miRNA-associated cell activity and apoptosis. |
| T11 | 1719-1831 | Sentence | denotes | This provides insight information into the molecular mechanism of the anticancer activity of this fungal lectin. |
Glycosmos6-MAT
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 519-524 | http://purl.obolibrary.org/obo/MAT_0000526 | denotes | colon |
| T2 | 692-697 | http://purl.obolibrary.org/obo/MAT_0000526 | denotes | colon |
GlycoBiology-FMA
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| _T1 | 78-83 | FMAID:68646 | denotes | cells |
| _T2 | 78-83 | FMAID:169002 | denotes | cells |
| _T3 | 120-125 | FMAID:198663 | denotes | genes |
| _T4 | 345-357 | FMAID:82737 | denotes | carbohydrate |
| _T5 | 345-357 | FMAID:197276 | denotes | carbohydrate |
| _T6 | 519-524 | FMAID:14543 | denotes | colon |
| _T7 | 519-524 | FMAID:104231 | denotes | colon |
| _T8 | 526-532 | FMAID:9601 | denotes | breast |
| _T9 | 526-532 | FMAID:97486 | denotes | breast |
| _T10 | 552-557 | FMAID:169002 | denotes | cells |
| _T11 | 552-557 | FMAID:68646 | denotes | cells |
| _T12 | 692-697 | FMAID:14543 | denotes | colon |
| _T13 | 692-697 | FMAID:104231 | denotes | colon |
| _T14 | 710-715 | FMAID:169002 | denotes | cells |
| _T15 | 710-715 | FMAID:68646 | denotes | cells |
| _T16 | 866-873 | FMAID:67257 | denotes | protein |
| _T17 | 866-873 | FMAID:165447 | denotes | protein |
| _T18 | 931-939 | FMAID:86471 | denotes | and cell |
| _T19 | 931-939 | FMAID:200932 | denotes | and cell |
| _T20 | 1352-1357 | FMAID:68646 | denotes | cells |
| _T21 | 1352-1357 | FMAID:169002 | denotes | cells |
| _T22 | 1573-1578 | FMAID:68646 | denotes | cells |
| _T23 | 1573-1578 | FMAID:169002 | denotes | cells |
uniprot-human
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 221-224 | http://www.uniprot.org/uniprot/Q86TD4 | denotes | SRL |
| T2 | 506-509 | http://www.uniprot.org/uniprot/Q86TD4 | denotes | SRL |
| T3 | 655-658 | http://www.uniprot.org/uniprot/Q86TD4 | denotes | SRL |
| T4 | 765-768 | http://www.uniprot.org/uniprot/Q86TD4 | denotes | SRL |
| T5 | 1053-1056 | http://www.uniprot.org/uniprot/Q86TD4 | denotes | SRL |
| T6 | 1363-1366 | http://www.uniprot.org/uniprot/Q86TD4 | denotes | SRL |
| T7 | 1523-1526 | http://www.uniprot.org/uniprot/Q86TD4 | denotes | SRL |
| T8 | 399-401 | http://www.uniprot.org/uniprot/P02787 | denotes | TF |
| T9 | 399-401 | http://www.uniprot.org/uniprot/P13726 | denotes | TF |
| T10 | 894-897 | http://www.uniprot.org/uniprot/P05412 | denotes | JUN |
| T11 | 1097-1100 | http://www.uniprot.org/uniprot/P05412 | denotes | JUN |
| T12 | 1656-1659 | http://www.uniprot.org/uniprot/P05412 | denotes | JUN |
uniprot-mouse
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 399-401 | http://www.uniprot.org/uniprot/P20352 | denotes | TF |
GlycoBiology-NCBITAXON
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 10-19 | http://purl.bioontology.org/ontology/NCBITAXON/127244 | denotes | mechanism |
| T2 | 44-54 | http://purl.bioontology.org/ontology/NCBITAXON/109383 | denotes | Sclerotium |
| T3 | 44-54 | http://purl.bioontology.org/ontology/NCBITAXON/109384 | denotes | Sclerotium |
| T4 | 78-83 | http://purl.bioontology.org/ontology/STY/T025 | denotes | cells |
| T5 | 194-204 | http://purl.bioontology.org/ontology/NCBITAXON/109383 | denotes | Sclerotium |
| T6 | 194-204 | http://purl.bioontology.org/ontology/NCBITAXON/109384 | denotes | Sclerotium |
| T7 | 252-258 | http://purl.bioontology.org/ontology/STY/T004 | denotes | fungus |
| T8 | 449-456 | http://purl.bioontology.org/ontology/NCBITAXON/6754 | denotes | cancers |
| T9 | 545-551 | http://purl.bioontology.org/ontology/NCBITAXON/6754 | denotes | cancer |
| T10 | 552-557 | http://purl.bioontology.org/ontology/STY/T025 | denotes | cells |
| T11 | 698-704 | http://purl.bioontology.org/ontology/NCBITAXON/6754 | denotes | cancer |
| T12 | 710-715 | http://purl.bioontology.org/ontology/STY/T025 | denotes | cells |
| T13 | 1352-1357 | http://purl.bioontology.org/ontology/STY/T025 | denotes | cells |
| T14 | 1566-1572 | http://purl.bioontology.org/ontology/NCBITAXON/6754 | denotes | cancer |
| T15 | 1573-1578 | http://purl.bioontology.org/ontology/STY/T025 | denotes | cells |
| T16 | 1772-1781 | http://purl.bioontology.org/ontology/NCBITAXON/127244 | denotes | mechanism |
GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 106-125 | http://purl.obolibrary.org/obo/GO_0010467 | denotes | expression of genes |
| T2 | 151-160 | http://purl.obolibrary.org/obo/GO_0023052 | denotes | signaling |
| T3 | 673-682 | http://purl.obolibrary.org/obo/GO_0023052 | denotes | signaling |
| T4 | 977-986 | http://purl.obolibrary.org/obo/GO_0023052 | denotes | signaling |
| T5 | 1112-1121 | http://purl.obolibrary.org/obo/GO_0023052 | denotes | signaling |
| T6 | 1544-1553 | http://purl.obolibrary.org/obo/GO_0023052 | denotes | signaling |
| T7 | 151-169 | http://purl.obolibrary.org/obo/GO_0007165 | denotes | signaling pathways |
| T8 | 1112-1130 | http://purl.obolibrary.org/obo/GO_0007165 | denotes | signaling pathways |
| T9 | 1544-1562 | http://purl.obolibrary.org/obo/GO_0007165 | denotes | signaling pathways |
| T10 | 571-580 | http://purl.obolibrary.org/obo/GO_0006915 | denotes | apoptosis |
| T11 | 571-580 | http://purl.obolibrary.org/obo/GO_0097194 | denotes | apoptosis |
| T12 | 910-919 | http://purl.obolibrary.org/obo/GO_0006915 | denotes | apoptosis |
| T13 | 910-919 | http://purl.obolibrary.org/obo/GO_0097194 | denotes | apoptosis |
| T14 | 1196-1205 | http://purl.obolibrary.org/obo/GO_0006915 | denotes | apoptosis |
| T15 | 1196-1205 | http://purl.obolibrary.org/obo/GO_0097194 | denotes | apoptosis |
| T16 | 1708-1717 | http://purl.obolibrary.org/obo/GO_0006915 | denotes | apoptosis |
| T17 | 1708-1717 | http://purl.obolibrary.org/obo/GO_0097194 | denotes | apoptosis |
| T18 | 611-617 | http://purl.obolibrary.org/obo/GO_0040007 | denotes | growth |
| T19 | 848-865 | http://purl.obolibrary.org/obo/GO_0045840 | denotes | mitogen-activated |
| T20 | 856-880 | http://purl.obolibrary.org/obo/GO_0004691 | denotes | activated protein kinase |
| T21 | 856-880 | http://purl.obolibrary.org/obo/GO_0004674 | denotes | activated protein kinase |
| T22 | 856-880 | http://purl.obolibrary.org/obo/GO_0004713 | denotes | activated protein kinase |
| T23 | 856-880 | http://purl.obolibrary.org/obo/GO_0034199 | denotes | activated protein kinase |
| T24 | 856-880 | http://purl.obolibrary.org/obo/GO_0050321 | denotes | activated protein kinase |
| T25 | 856-880 | http://purl.obolibrary.org/obo/GO_2000479 | denotes | activated protein kinase |
| T26 | 856-880 | http://purl.obolibrary.org/obo/GO_0004860 | denotes | activated protein kinase |
| T27 | 882-886 | http://purl.obolibrary.org/obo/GO_0004707 | denotes | MAPK |
| T28 | 1086-1090 | http://purl.obolibrary.org/obo/GO_0004707 | denotes | MAPK |
| T29 | 1645-1649 | http://purl.obolibrary.org/obo/GO_0004707 | denotes | MAPK |
| T30 | 935-945 | http://purl.obolibrary.org/obo/GO_0007049 | denotes | cell cycle |
| T31 | 1164-1174 | http://purl.obolibrary.org/obo/GO_0007049 | denotes | cell cycle |
| T32 | 935-965 | http://purl.obolibrary.org/obo/GO_0044786 | denotes | cell cycle and DNA replication |
| T33 | 1164-1191 | http://purl.obolibrary.org/obo/GO_0044786 | denotes | cell cycle, DNA replication |
| T34 | 935-965 | http://purl.obolibrary.org/obo/GO_0006279 | denotes | cell cycle and DNA replication |
| T35 | 1164-1191 | http://purl.obolibrary.org/obo/GO_0006279 | denotes | cell cycle, DNA replication |
| T36 | 935-965 | http://purl.obolibrary.org/obo/GO_0033260 | denotes | cell cycle and DNA replication |
| T37 | 1164-1191 | http://purl.obolibrary.org/obo/GO_0033260 | denotes | cell cycle, DNA replication |
| T38 | 935-965 | http://purl.obolibrary.org/obo/GO_1902292 | denotes | cell cycle and DNA replication |
| T39 | 1164-1191 | http://purl.obolibrary.org/obo/GO_1902292 | denotes | cell cycle, DNA replication |
| T40 | 935-965 | http://purl.obolibrary.org/obo/GO_1902294 | denotes | cell cycle and DNA replication |
| T41 | 1164-1191 | http://purl.obolibrary.org/obo/GO_1902294 | denotes | cell cycle, DNA replication |
| T42 | 935-965 | http://purl.obolibrary.org/obo/GO_1902969 | denotes | cell cycle and DNA replication |
| T43 | 1164-1191 | http://purl.obolibrary.org/obo/GO_1902969 | denotes | cell cycle, DNA replication |
| T44 | 950-965 | http://purl.obolibrary.org/obo/GO_0006260 | denotes | DNA replication |
| T45 | 1176-1191 | http://purl.obolibrary.org/obo/GO_0006260 | denotes | DNA replication |
| T46 | 1601-1619 | http://purl.obolibrary.org/obo/GO_0008283 | denotes | cell proliferation |
| T47 | 1690-1703 | http://purl.obolibrary.org/obo/GO_0001775 | denotes | cell activity |
| T48 | 1690-1717 | http://purl.obolibrary.org/obo/GO_0002904 | denotes | cell activity and apoptosis |
| T49 | 1690-1717 | http://purl.obolibrary.org/obo/GO_0033034 | denotes | cell activity and apoptosis |
| T50 | 1690-1717 | http://purl.obolibrary.org/obo/GO_1904037 | denotes | cell activity and apoptosis |
| T51 | 1690-1717 | http://purl.obolibrary.org/obo/GO_0006924 | denotes | cell activity and apoptosis |
| T52 | 1690-1717 | http://purl.obolibrary.org/obo/GO_0070238 | denotes | cell activity and apoptosis |
| T53 | 1690-1717 | http://purl.obolibrary.org/obo/GO_0070234 | denotes | cell activity and apoptosis |
| T54 | 1690-1717 | http://purl.obolibrary.org/obo/GO_0033027 | denotes | cell activity and apoptosis |
| T55 | 1690-1717 | http://purl.obolibrary.org/obo/GO_0034352 | denotes | cell activity and apoptosis |
| T56 | 1690-1717 | http://purl.obolibrary.org/obo/GO_0045850 | denotes | cell activity and apoptosis |
| T57 | 1690-1717 | http://purl.obolibrary.org/obo/GO_1904651 | denotes | cell activity and apoptosis |
| T58 | 1690-1717 | http://purl.obolibrary.org/obo/GO_1904710 | denotes | cell activity and apoptosis |
| T59 | 1695-1717 | http://purl.obolibrary.org/obo/GO_0006915 | denotes | activity and apoptosis |
| T60 | 1695-1717 | http://purl.obolibrary.org/obo/GO_0043065 | denotes | activity and apoptosis |
GO-MF
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 283-290 | http://purl.obolibrary.org/obo/GO_0070026 | denotes | binding |
| T2 | 495-502 | http://purl.obolibrary.org/obo/GO_0070026 | denotes | binding |
| T3 | 283-290 | http://purl.obolibrary.org/obo/GO_0003680 | denotes | binding |
| T4 | 495-502 | http://purl.obolibrary.org/obo/GO_0003680 | denotes | binding |
| T5 | 283-290 | http://purl.obolibrary.org/obo/GO_0017091 | denotes | binding |
| T6 | 495-502 | http://purl.obolibrary.org/obo/GO_0017091 | denotes | binding |
| T7 | 283-290 | http://purl.obolibrary.org/obo/GO_0005488 | denotes | binding |
| T8 | 495-502 | http://purl.obolibrary.org/obo/GO_0005488 | denotes | binding |
| T9 | 856-880 | http://purl.obolibrary.org/obo/GO_0034237 | denotes | activated protein kinase |
| T10 | 856-880 | http://purl.obolibrary.org/obo/GO_0051018 | denotes | activated protein kinase |
GO-CC
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 78-83 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T2 | 552-557 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T3 | 710-715 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T4 | 1352-1357 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T5 | 566-570 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
| T6 | 668-672 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
| T7 | 935-939 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
| T8 | 1164-1168 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
| T9 | 1284-1288 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
| T10 | 1601-1605 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
| T11 | 1690-1694 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
| T12 | 385-388 | http://purl.obolibrary.org/obo/GO_0005790 | denotes | Ser |
| T13 | 920-939 | http://purl.obolibrary.org/obo/GO_0009986 | denotes | associated and cell |
| T14 | 1679-1694 | http://purl.obolibrary.org/obo/GO_0009986 | denotes | associated cell |
UBERON-AE
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 519-524 | http://purl.obolibrary.org/obo/UBERON_0001155 | denotes | colon |
| T2 | 692-697 | http://purl.obolibrary.org/obo/UBERON_0001155 | denotes | colon |
| T3 | 526-532 | http://purl.obolibrary.org/obo/UBERON_0000310 | denotes | breast |
GlycoBiology-MAT
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 519-524 | http://purl.obolibrary.org/obo/MAT_0000526 | denotes | colon |
| T2 | 692-697 | http://purl.obolibrary.org/obo/MAT_0000526 | denotes | colon |
GlyTouCan-IUPAC
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| GlycanIUPAC_T1 | 389-392 | "http://rdf.glycoinfo.org/glycan/G69371PB" | denotes | Thr |
| GlycanIUPAC_T2 | 389-392 | "http://rdf.glycoinfo.org/glycan/G04439TG" | denotes | Thr |
| GlycanIUPAC_T3 | 389-392 | "http://rdf.glycoinfo.org/glycan/G01418RR" | denotes | Thr |
| GlycanIUPAC_T4 | 389-392 | "http://rdf.glycoinfo.org/glycan/G98605AX" | denotes | Thr |
| GlycanIUPAC_T5 | 389-392 | "http://rdf.glycoinfo.org/glycan/G24282OK" | denotes | Thr |
| GlycanIUPAC_T6 | 389-392 | "http://rdf.glycoinfo.org/glycan/G55879EK" | denotes | Thr |
| GlycanIUPAC_T7 | 389-392 | "http://rdf.glycoinfo.org/glycan/G12116BQ" | denotes | Thr |
| GlycanIUPAC_T8 | 389-392 | "http://rdf.glycoinfo.org/glycan/G54590PA" | denotes | Thr |
| GlycanIUPAC_T9 | 389-392 | "http://rdf.glycoinfo.org/glycan/G31652HG" | denotes | Thr |
| GlycanIUPAC_T10 | 389-392 | "http://rdf.glycoinfo.org/glycan/G15155WL" | denotes | Thr |
| GlycanIUPAC_T11 | 389-392 | "http://rdf.glycoinfo.org/glycan/G52301ZX" | denotes | Thr |
| GlycanIUPAC_T12 | 389-392 | "http://rdf.glycoinfo.org/glycan/G04075BC" | denotes | Thr |
| GlycanIUPAC_T13 | 389-392 | "http://rdf.glycoinfo.org/glycan/G40829OF" | denotes | Thr |
| GlycanIUPAC_T14 | 389-392 | "http://rdf.glycoinfo.org/glycan/G29274DI" | denotes | Thr |
| GlycanIUPAC_T15 | 389-392 | "http://rdf.glycoinfo.org/glycan/G50601AY" | denotes | Thr |
| GlycanIUPAC_T16 | 389-392 | "http://rdf.glycoinfo.org/glycan/G52865ZM" | denotes | Thr |
| GlycanIUPAC_T17 | 389-392 | "http://rdf.glycoinfo.org/glycan/G73633QJ" | denotes | Thr |
| GlycanIUPAC_T18 | 389-392 | "http://rdf.glycoinfo.org/glycan/G33319MN" | denotes | Thr |
| GlycanIUPAC_T19 | 389-392 | "http://rdf.glycoinfo.org/glycan/G94717IQ" | denotes | Thr |
| GlycanIUPAC_T20 | 389-392 | "http://rdf.glycoinfo.org/glycan/G50452ZL" | denotes | Thr |
| GlycanIUPAC_T21 | 389-392 | "http://rdf.glycoinfo.org/glycan/G90753WM" | denotes | Thr |
| GlycanIUPAC_T22 | 389-392 | "http://rdf.glycoinfo.org/glycan/G27898GL" | denotes | Thr |
| GlycanIUPAC_T23 | 389-392 | "http://rdf.glycoinfo.org/glycan/G03827YH" | denotes | Thr |
| GlycanIUPAC_T24 | 389-392 | "http://rdf.glycoinfo.org/glycan/G64500BA" | denotes | Thr |
| GlycanIUPAC_T25 | 389-392 | "http://rdf.glycoinfo.org/glycan/G89743XV" | denotes | Thr |
| GlycanIUPAC_T26 | 389-392 | "http://rdf.glycoinfo.org/glycan/G62576QG" | denotes | Thr |
| GlycanIUPAC_T27 | 389-392 | "http://rdf.glycoinfo.org/glycan/G70212CQ" | denotes | Thr |
| GlycanIUPAC_T28 | 389-392 | "http://rdf.glycoinfo.org/glycan/G74708KP" | denotes | Thr |
| GlycanIUPAC_T29 | 389-392 | "http://rdf.glycoinfo.org/glycan/G02394PC" | denotes | Thr |
| GlycanIUPAC_T30 | 389-392 | "http://rdf.glycoinfo.org/glycan/G57814GP" | denotes | Thr |
| GlycanIUPAC_T31 | 389-392 | "http://rdf.glycoinfo.org/glycan/G81521LC" | denotes | Thr |
| GlycanIUPAC_T32 | 389-392 | "http://rdf.glycoinfo.org/glycan/G42918SL" | denotes | Thr |
| GlycanIUPAC_T33 | 389-392 | "http://rdf.glycoinfo.org/glycan/G95238FE" | denotes | Thr |
| GlycanIUPAC_T34 | 389-392 | "http://rdf.glycoinfo.org/glycan/G28403TD" | denotes | Thr |
| GlycanIUPAC_T35 | 389-392 | "http://rdf.glycoinfo.org/glycan/G30379UC" | denotes | Thr |
| GlycanIUPAC_T36 | 389-392 | "http://rdf.glycoinfo.org/glycan/G83583TH" | denotes | Thr |
| GlycanIUPAC_T37 | 389-392 | "http://rdf.glycoinfo.org/glycan/G59548EJ" | denotes | Thr |
| GlycanIUPAC_T38 | 389-392 | "http://rdf.glycoinfo.org/glycan/G47410OV" | denotes | Thr |
| GlycanIUPAC_T39 | 389-392 | "http://rdf.glycoinfo.org/glycan/G88663EK" | denotes | Thr |
| GlycanIUPAC_T40 | 389-392 | "http://rdf.glycoinfo.org/glycan/G90684PG" | denotes | Thr |
| GlycanIUPAC_T41 | 389-392 | "http://rdf.glycoinfo.org/glycan/G44881OW" | denotes | Thr |
| GlycanIUPAC_T42 | 389-392 | "http://rdf.glycoinfo.org/glycan/G54691YO" | denotes | Thr |
| GlycanIUPAC_T43 | 389-392 | "http://rdf.glycoinfo.org/glycan/G19289PT" | denotes | Thr |
| GlycanIUPAC_T44 | 389-392 | "http://rdf.glycoinfo.org/glycan/G23779KC" | denotes | Thr |
| GlycanIUPAC_T45 | 389-392 | "http://rdf.glycoinfo.org/glycan/G94729UX" | denotes | Thr |
| GlycanIUPAC_T46 | 389-392 | "http://rdf.glycoinfo.org/glycan/G34038TZ" | denotes | Thr |
| GlycanIUPAC_T47 | 389-392 | "http://rdf.glycoinfo.org/glycan/G90659JR" | denotes | Thr |
| GlycanIUPAC_T48 | 389-392 | "http://rdf.glycoinfo.org/glycan/G74977VW" | denotes | Thr |
| GlycanIUPAC_T49 | 389-392 | "http://rdf.glycoinfo.org/glycan/G42696WA" | denotes | Thr |
| GlycanIUPAC_T50 | 389-392 | "http://rdf.glycoinfo.org/glycan/G82531XS" | denotes | Thr |
| GlycanIUPAC_T51 | 389-392 | "http://rdf.glycoinfo.org/glycan/G47639GO" | denotes | Thr |
| GlycanIUPAC_T52 | 389-392 | "http://rdf.glycoinfo.org/glycan/G69282NX" | denotes | Thr |
| GlycanIUPAC_T53 | 389-392 | "http://rdf.glycoinfo.org/glycan/G49708JS" | denotes | Thr |
| GlycanIUPAC_T54 | 389-392 | "http://rdf.glycoinfo.org/glycan/G63317ON" | denotes | Thr |
| GlycanIUPAC_T55 | 389-392 | "http://rdf.glycoinfo.org/glycan/G60349YI" | denotes | Thr |
| GlycanIUPAC_T56 | 389-392 | "http://rdf.glycoinfo.org/glycan/G81659AQ" | denotes | Thr |
| GlycanIUPAC_T57 | 389-392 | "http://rdf.glycoinfo.org/glycan/G16289GE" | denotes | Thr |
| GlycanIUPAC_T58 | 389-392 | "http://rdf.glycoinfo.org/glycan/G69569AG" | denotes | Thr |
| GlycanIUPAC_T59 | 389-392 | "http://rdf.glycoinfo.org/glycan/G16884LK" | denotes | Thr |
| GlycanIUPAC_T60 | 389-392 | "http://rdf.glycoinfo.org/glycan/G23450NH" | denotes | Thr |
| GlycanIUPAC_T61 | 389-392 | "http://rdf.glycoinfo.org/glycan/G85052FR" | denotes | Thr |
| GlycanIUPAC_T62 | 389-392 | "http://rdf.glycoinfo.org/glycan/G55485RI" | denotes | Thr |
| GlycanIUPAC_T63 | 389-392 | "http://rdf.glycoinfo.org/glycan/G80596GL" | denotes | Thr |
| GlycanIUPAC_T64 | 389-392 | "http://rdf.glycoinfo.org/glycan/G39656RU" | denotes | Thr |
| GlycanIUPAC_T65 | 389-392 | "http://rdf.glycoinfo.org/glycan/G71284FA" | denotes | Thr |
| GlycanIUPAC_T66 | 389-392 | "http://rdf.glycoinfo.org/glycan/G42091PK" | denotes | Thr |
| GlycanIUPAC_T67 | 389-392 | "http://rdf.glycoinfo.org/glycan/G38798SL" | denotes | Thr |
| GlycanIUPAC_T68 | 389-392 | "http://rdf.glycoinfo.org/glycan/G36670NA" | denotes | Thr |
| GlycanIUPAC_T69 | 389-392 | "http://rdf.glycoinfo.org/glycan/G91582QV" | denotes | Thr |
| GlycanIUPAC_T70 | 389-392 | "http://rdf.glycoinfo.org/glycan/G28625IE" | denotes | Thr |
| GlycanIUPAC_T71 | 389-392 | "http://rdf.glycoinfo.org/glycan/G81304ZT" | denotes | Thr |
| GlycanIUPAC_T72 | 389-392 | "http://rdf.glycoinfo.org/glycan/G82883BK" | denotes | Thr |
| GlycanIUPAC_T73 | 389-392 | "http://rdf.glycoinfo.org/glycan/G46290DK" | denotes | Thr |
| GlycanIUPAC_T74 | 389-392 | "http://rdf.glycoinfo.org/glycan/G68202TJ" | denotes | Thr |
| GlycanIUPAC_T75 | 389-392 | "http://rdf.glycoinfo.org/glycan/G39722QK" | denotes | Thr |
| GlycanIUPAC_T76 | 389-392 | "http://rdf.glycoinfo.org/glycan/G76637LW" | denotes | Thr |
| GlycanIUPAC_T77 | 389-392 | "http://rdf.glycoinfo.org/glycan/G51390WF" | denotes | Thr |
| GlycanIUPAC_T78 | 389-392 | "http://rdf.glycoinfo.org/glycan/G35392PX" | denotes | Thr |
| GlycanIUPAC_T79 | 389-392 | "http://rdf.glycoinfo.org/glycan/G27815EZ" | denotes | Thr |
| GlycanIUPAC_T80 | 389-392 | "http://rdf.glycoinfo.org/glycan/G64374OT" | denotes | Thr |
| GlycanIUPAC_T81 | 389-392 | "http://rdf.glycoinfo.org/glycan/G58333PU" | denotes | Thr |
| GlycanIUPAC_T82 | 389-392 | "http://rdf.glycoinfo.org/glycan/G19695IE" | denotes | Thr |
| GlycanIUPAC_T83 | 389-392 | "http://rdf.glycoinfo.org/glycan/G65617GK" | denotes | Thr |
| GlycanIUPAC_T84 | 389-392 | "http://rdf.glycoinfo.org/glycan/G29832KZ" | denotes | Thr |
| GlycanIUPAC_T85 | 389-392 | "http://rdf.glycoinfo.org/glycan/G05333AM" | denotes | Thr |
| GlycanIUPAC_T86 | 389-392 | "http://rdf.glycoinfo.org/glycan/G46130CG" | denotes | Thr |
| GlycanIUPAC_T87 | 389-392 | "http://rdf.glycoinfo.org/glycan/G57766RG" | denotes | Thr |
| GlycanIUPAC_T88 | 389-392 | "http://rdf.glycoinfo.org/glycan/G03334HH" | denotes | Thr |
| GlycanIUPAC_T89 | 389-392 | "http://rdf.glycoinfo.org/glycan/G46094SV" | denotes | Thr |
| GlycanIUPAC_T90 | 389-392 | "http://rdf.glycoinfo.org/glycan/G98365FX" | denotes | Thr |
| GlycanIUPAC_T91 | 389-392 | "http://rdf.glycoinfo.org/glycan/G85392EJ" | denotes | Thr |
| GlycanIUPAC_T92 | 389-392 | "http://rdf.glycoinfo.org/glycan/G59996WL" | denotes | Thr |
| GlycanIUPAC_T93 | 389-392 | "http://rdf.glycoinfo.org/glycan/G49141OD" | denotes | Thr |
| GlycanIUPAC_T94 | 389-392 | "http://rdf.glycoinfo.org/glycan/G88793VU" | denotes | Thr |
| GlycanIUPAC_T95 | 389-392 | "http://rdf.glycoinfo.org/glycan/G88801WQ" | denotes | Thr |
| GlycanIUPAC_T96 | 389-392 | "http://rdf.glycoinfo.org/glycan/G61612EQ" | denotes | Thr |
| GlycanIUPAC_T97 | 389-392 | "http://rdf.glycoinfo.org/glycan/G23181BS" | denotes | Thr |
| GlycanIUPAC_T98 | 389-392 | "http://rdf.glycoinfo.org/glycan/G77428YW" | denotes | Thr |
| GlycanIUPAC_T99 | 389-392 | "http://rdf.glycoinfo.org/glycan/G06824UZ" | denotes | Thr |
| GlycanIUPAC_T100 | 389-392 | "http://rdf.glycoinfo.org/glycan/G15142RK" | denotes | Thr |
| GlycanIUPAC_T101 | 389-392 | "http://rdf.glycoinfo.org/glycan/G18198RM" | denotes | Thr |
| GlycanIUPAC_T102 | 389-392 | "http://rdf.glycoinfo.org/glycan/G70750SS" | denotes | Thr |
| GlycanIUPAC_T103 | 389-392 | "http://rdf.glycoinfo.org/glycan/G04998YJ" | denotes | Thr |
| GlycanIUPAC_T104 | 389-392 | "http://rdf.glycoinfo.org/glycan/G44379HX" | denotes | Thr |
| GlycanIUPAC_T105 | 389-392 | "http://rdf.glycoinfo.org/glycan/G25683ZO" | denotes | Thr |
| GlycanIUPAC_T106 | 389-392 | "http://rdf.glycoinfo.org/glycan/G35036BA" | denotes | Thr |
| GlycanIUPAC_T107 | 389-392 | "http://rdf.glycoinfo.org/glycan/G98129RB" | denotes | Thr |
| GlycanIUPAC_T108 | 389-392 | "http://rdf.glycoinfo.org/glycan/G00134PL" | denotes | Thr |
| GlycanIUPAC_T109 | 389-392 | "http://rdf.glycoinfo.org/glycan/G26488SP" | denotes | Thr |
| GlycanIUPAC_T110 | 389-392 | "http://rdf.glycoinfo.org/glycan/G02441UD" | denotes | Thr |
| GlycanIUPAC_T111 | 389-392 | "http://rdf.glycoinfo.org/glycan/G21668ZD" | denotes | Thr |
| GlycanIUPAC_T112 | 389-392 | "http://rdf.glycoinfo.org/glycan/G67040OT" | denotes | Thr |
| GlycanIUPAC_T113 | 389-392 | "http://rdf.glycoinfo.org/glycan/G56431YZ" | denotes | Thr |
| GlycanIUPAC_T114 | 389-392 | "http://rdf.glycoinfo.org/glycan/G29667IS" | denotes | Thr |
| GlycanIUPAC_T115 | 389-392 | "http://rdf.glycoinfo.org/glycan/G94122LM" | denotes | Thr |
| GlycanIUPAC_T116 | 389-392 | "http://rdf.glycoinfo.org/glycan/G93233YT" | denotes | Thr |
| GlycanIUPAC_T117 | 389-392 | "http://rdf.glycoinfo.org/glycan/G72035WK" | denotes | Thr |
| GlycanIUPAC_T118 | 389-392 | "http://rdf.glycoinfo.org/glycan/G99855SM" | denotes | Thr |
| GlycanIUPAC_T119 | 389-392 | "http://rdf.glycoinfo.org/glycan/G48723MN" | denotes | Thr |
| GlycanIUPAC_T120 | 389-392 | "http://rdf.glycoinfo.org/glycan/G28558MB" | denotes | Thr |
| GlycanIUPAC_T121 | 389-392 | "http://rdf.glycoinfo.org/glycan/G92768RX" | denotes | Thr |
| GlycanIUPAC_T122 | 389-392 | "http://rdf.glycoinfo.org/glycan/G70136KU" | denotes | Thr |
| GlycanIUPAC_T123 | 389-392 | "http://rdf.glycoinfo.org/glycan/G37935YM" | denotes | Thr |
| GlycanIUPAC_T124 | 389-392 | "http://rdf.glycoinfo.org/glycan/G96902PQ" | denotes | Thr |
| GlycanIUPAC_T125 | 389-392 | "http://rdf.glycoinfo.org/glycan/G14015DN" | denotes | Thr |
| GlycanIUPAC_T126 | 389-392 | "http://rdf.glycoinfo.org/glycan/G83153IV" | denotes | Thr |
| GlycanIUPAC_T127 | 389-392 | "http://rdf.glycoinfo.org/glycan/G73174QP" | denotes | Thr |
| GlycanIUPAC_T128 | 389-392 | "http://rdf.glycoinfo.org/glycan/G67188XY" | denotes | Thr |
| GlycanIUPAC_T129 | 389-392 | "http://rdf.glycoinfo.org/glycan/G35093GE" | denotes | Thr |
| GlycanIUPAC_T130 | 389-392 | "http://rdf.glycoinfo.org/glycan/G13364VQ" | denotes | Thr |
| GlycanIUPAC_T131 | 389-392 | "http://rdf.glycoinfo.org/glycan/G72068FB" | denotes | Thr |
| GlycanIUPAC_T132 | 389-392 | "http://rdf.glycoinfo.org/glycan/G93329DU" | denotes | Thr |
| GlycanIUPAC_T133 | 389-392 | "http://rdf.glycoinfo.org/glycan/G54073VB" | denotes | Thr |
| GlycanIUPAC_T134 | 389-392 | "http://rdf.glycoinfo.org/glycan/G41447UI" | denotes | Thr |
| GlycanIUPAC_T135 | 389-392 | "http://rdf.glycoinfo.org/glycan/G85878MY" | denotes | Thr |
| GlycanIUPAC_T136 | 389-392 | "http://rdf.glycoinfo.org/glycan/G92835HR" | denotes | Thr |
| GlycanIUPAC_T137 | 389-392 | "http://rdf.glycoinfo.org/glycan/G34845TQ" | denotes | Thr |
| GlycanIUPAC_T138 | 389-392 | "http://rdf.glycoinfo.org/glycan/G38916XK" | denotes | Thr |
| GlycanIUPAC_T139 | 389-392 | "http://rdf.glycoinfo.org/glycan/G87709OA" | denotes | Thr |
| GlycanIUPAC_T140 | 389-392 | "http://rdf.glycoinfo.org/glycan/G46661GX" | denotes | Thr |
| GlycanIUPAC_T141 | 389-392 | "http://rdf.glycoinfo.org/glycan/G53431DX" | denotes | Thr |
| GlycanIUPAC_T142 | 389-392 | "http://rdf.glycoinfo.org/glycan/G71815PL" | denotes | Thr |
| GlycanIUPAC_T143 | 389-392 | "http://rdf.glycoinfo.org/glycan/G97173UR" | denotes | Thr |
| GlycanIUPAC_T144 | 389-392 | "http://rdf.glycoinfo.org/glycan/G53453JD" | denotes | Thr |
| GlycanIUPAC_T145 | 389-392 | "http://rdf.glycoinfo.org/glycan/G48975CP" | denotes | Thr |
| GlycanIUPAC_T146 | 389-392 | "http://rdf.glycoinfo.org/glycan/G87775XT" | denotes | Thr |
| GlycanIUPAC_T147 | 389-392 | "http://rdf.glycoinfo.org/glycan/G48463GY" | denotes | Thr |
| GlycanIUPAC_T148 | 389-392 | "http://rdf.glycoinfo.org/glycan/G54042BQ" | denotes | Thr |
| GlycanIUPAC_T149 | 389-392 | "http://rdf.glycoinfo.org/glycan/G99993MV" | denotes | Thr |
| GlycanIUPAC_T150 | 389-392 | "http://rdf.glycoinfo.org/glycan/G81407LL" | denotes | Thr |
| GlycanIUPAC_T151 | 389-392 | "http://rdf.glycoinfo.org/glycan/G46430YF" | denotes | Thr |
| GlycanIUPAC_T152 | 389-392 | "http://rdf.glycoinfo.org/glycan/G86548QQ" | denotes | Thr |
| GlycanIUPAC_T153 | 389-392 | "http://rdf.glycoinfo.org/glycan/G25645HZ" | denotes | Thr |
| GlycanIUPAC_T154 | 389-392 | "http://rdf.glycoinfo.org/glycan/G73880WZ" | denotes | Thr |
| GlycanIUPAC_T155 | 389-392 | "http://rdf.glycoinfo.org/glycan/G12979RT" | denotes | Thr |
| GlycanIUPAC_T156 | 389-392 | "http://rdf.glycoinfo.org/glycan/G36146RU" | denotes | Thr |
| GlycanIUPAC_T157 | 389-392 | "http://rdf.glycoinfo.org/glycan/G23944RZ" | denotes | Thr |
| GlycanIUPAC_T158 | 389-392 | "http://rdf.glycoinfo.org/glycan/G67041BN" | denotes | Thr |
| GlycanIUPAC_T159 | 389-392 | "http://rdf.glycoinfo.org/glycan/G95408HX" | denotes | Thr |
| GlycanIUPAC_T160 | 389-392 | "http://rdf.glycoinfo.org/glycan/G31094CC" | denotes | Thr |
| GlycanIUPAC_T161 | 389-392 | "http://rdf.glycoinfo.org/glycan/G99598GU" | denotes | Thr |
| GlycanIUPAC_T162 | 389-392 | "http://rdf.glycoinfo.org/glycan/G94072IC" | denotes | Thr |
| GlycanIUPAC_T163 | 389-392 | "http://rdf.glycoinfo.org/glycan/G09523ZS" | denotes | Thr |
performance-test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| PD-UBERON-AE-B_T1 | 526-532 | http://purl.obolibrary.org/obo/UBERON_0000310 | denotes | breast |
| PD-UBERON-AE-B_T2 | 519-524 | http://purl.obolibrary.org/obo/UBERON_0001155 | denotes | colon |
| PD-UBERON-AE-B_T3 | 692-697 | http://purl.obolibrary.org/obo/UBERON_0001155 | denotes | colon |
mondo_disease
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T1 | 537-551 | Disease | denotes | ovarian cancer | http://purl.obolibrary.org/obo/MONDO_0008170 |
| T2 | 605-610 | Disease | denotes | tumor | http://purl.obolibrary.org/obo/MONDO_0005070 |
| T3 | 692-704 | Disease | denotes | colon cancer | http://purl.obolibrary.org/obo/MONDO_0021063 |
| T4 | 1566-1572 | Disease | denotes | cancer | http://purl.obolibrary.org/obo/MONDO_0004992 |
GlyCosmos15-Glycan
| Id | Subject | Object | Predicate | Lexical cue | image |
|---|---|---|---|---|---|
| T1 | 374-380 | Glycan | denotes | GalNAc | https://api.glycosmos.org/wurcs2image/latest/png/binary/G39738WL |
HP-phenotype
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T1 | 537-551 | Phenotype | denotes | ovarian cancer | HP:0100615 |
| T2 | 605-610 | Phenotype | denotes | tumor | HP:0002664 |
| T3 | 692-704 | Phenotype | denotes | colon cancer | HP:0003003 |
| T4 | 1566-1572 | Phenotype | denotes | cancer | HP:0002664 |
Glycan-GlyCosmos
| Id | Subject | Object | Predicate | Lexical cue | image |
|---|---|---|---|---|---|
| T1 | 374-380 | Glycan | denotes | GalNAc | https://api.glycosmos.org/wurcs2image/latest/png/binary/G39738WL |
GlyCosmos15-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T1 | 537-551 | Phenotype | denotes | ovarian cancer | HP:0100615 |
| T2 | 605-610 | Phenotype | denotes | tumor | HP:0002664 |
| T3 | 692-704 | Phenotype | denotes | colon cancer | HP:0003003 |
| T4 | 1566-1572 | Phenotype | denotes | cancer | HP:0002664 |
GlyCosmos15-CL
| Id | Subject | Object | Predicate | Lexical cue | cl_id |
|---|---|---|---|---|---|
| T1 | 545-557 | Cell | denotes | cancer cells | http://purl.obolibrary.org/obo/CL:0001064 |
| T2 | 1566-1578 | Cell | denotes | cancer cells | http://purl.obolibrary.org/obo/CL:0001064 |
GlyCosmos15-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T1 | 519-524 | Body_part | denotes | colon | http://purl.obolibrary.org/obo/UBERON_0001155 |
| T2 | 526-532 | Body_part | denotes | breast | http://purl.obolibrary.org/obo/UBERON_0000310 |
| T3 | 692-697 | Body_part | denotes | colon | http://purl.obolibrary.org/obo/UBERON_0001155 |
| T4 | 935-945 | Body_part | denotes | cell cycle | http://purl.obolibrary.org/obo/UBERON_2000098 |
| T5 | 1164-1174 | Body_part | denotes | cell cycle | http://purl.obolibrary.org/obo/UBERON_2000098 |
GlyCosmos15-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T1 | 537-551 | Disease | denotes | ovarian cancer | MONDO:0005140|MONDO:0008170 |
| T3 | 605-610 | Disease | denotes | tumor | MONDO:0005070 |
| T4 | 692-704 | Disease | denotes | colon cancer | MONDO:0002032|MONDO:0005575|MONDO:0021063 |
| T7 | 1566-1572 | Disease | denotes | cancer | MONDO:0004992 |
GlyCosmos15-Taxon
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T1 | 44-62 | Organism | denotes | Sclerotium rolfsii | 39291 |
| T2 | 194-212 | Organism | denotes | Sclerotium rolfsii | 39291 |
| T3 | 443-448 | Organism | denotes | human | 9606 |
| T4 | 513-518 | Organism | denotes | human | 9606 |
| T5 | 686-691 | Organism | denotes | human | 9606 |
GlyCosmos15-Sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-193 | Sentence | denotes | Molecular mechanism of anticancer effect of Sclerotium rolfsii lectin in HT29 cells involves differential expression of genes associated with multiple signaling pathways: A microarray analysis. |
| T2 | 194-457 | Sentence | denotes | Sclerotium rolfsii lectin (SRL) is a lectin isolated from fungus S. rolfsii and has high binding specificity toward the oncofetal Thomsen-Friedenreich carbohydrate antigen (Galβ1-3GalNAc-α-O-Ser/Thr, T or TF), which is expressed in more than 90% of human cancers. |
| T3 | 458-626 | Sentence | denotes | Our previous studies have shown that binding of SRL to human colon, breast and ovarian cancer cells induces cell apoptosis in vitro and suppresses tumor growth in vivo. |
| T4 | 627-746 | Sentence | denotes | This study investigated the SRL-mediated cell signaling in human colon cancer HT29 cells by mRNA and miRNA microarrays. |
| T5 | 747-997 | Sentence | denotes | It was found that SRL treatment results in altered expression of several hundred molecules including mitogen-activated protein kinase (MAPK) and c-JUN-associated, apoptosis-associated and cell cycle and DNA replication-associated signaling molecules. |
| T6 | 998-1259 | Sentence | denotes | Pathway analysis using GeneSpring 12.6.1 revealed that SRL treatment induces changes of MAPK and c-JUN-associated signaling pathways as early as 2 h while changes of cell cycle, DNA replication and apoptosis pathways were significantly affected only after 24 h. |
| T7 | 1260-1367 | Sentence | denotes | A significant change of cell miRNA expression was also observed after 12 h treatment of the cells with SRL. |
| T8 | 1368-1476 | Sentence | denotes | These changes were further validated by quantitative real time polymerase chain reaction and immunoblotting. |
| T9 | 1477-1718 | Sentence | denotes | This study thus suggests that the presence of SRL affects multiple signaling pathways in cancer cells with early effects on cell proliferation pathways associated with MAPK and c-JUN, followed by miRNA-associated cell activity and apoptosis. |
| T10 | 1719-1831 | Sentence | denotes | This provides insight information into the molecular mechanism of the anticancer activity of this fungal lectin. |
Lectin-Jamboree-Sentence
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-193 | Sentence | denotes | Molecular mechanism of anticancer effect of Sclerotium rolfsii lectin in HT29 cells involves differential expression of genes associated with multiple signaling pathways: A microarray analysis. |
| T2 | 194-457 | Sentence | denotes | Sclerotium rolfsii lectin (SRL) is a lectin isolated from fungus S. rolfsii and has high binding specificity toward the oncofetal Thomsen-Friedenreich carbohydrate antigen (Galβ1-3GalNAc-α-O-Ser/Thr, T or TF), which is expressed in more than 90% of human cancers. |
| T3 | 458-626 | Sentence | denotes | Our previous studies have shown that binding of SRL to human colon, breast and ovarian cancer cells induces cell apoptosis in vitro and suppresses tumor growth in vivo. |
| T4 | 627-746 | Sentence | denotes | This study investigated the SRL-mediated cell signaling in human colon cancer HT29 cells by mRNA and miRNA microarrays. |
| T5 | 747-997 | Sentence | denotes | It was found that SRL treatment results in altered expression of several hundred molecules including mitogen-activated protein kinase (MAPK) and c-JUN-associated, apoptosis-associated and cell cycle and DNA replication-associated signaling molecules. |
| T6 | 998-1259 | Sentence | denotes | Pathway analysis using GeneSpring 12.6.1 revealed that SRL treatment induces changes of MAPK and c-JUN-associated signaling pathways as early as 2 h while changes of cell cycle, DNA replication and apoptosis pathways were significantly affected only after 24 h. |
| T7 | 1260-1367 | Sentence | denotes | A significant change of cell miRNA expression was also observed after 12 h treatment of the cells with SRL. |
| T8 | 1368-1476 | Sentence | denotes | These changes were further validated by quantitative real time polymerase chain reaction and immunoblotting. |
| T9 | 1477-1718 | Sentence | denotes | This study thus suggests that the presence of SRL affects multiple signaling pathways in cancer cells with early effects on cell proliferation pathways associated with MAPK and c-JUN, followed by miRNA-associated cell activity and apoptosis. |
| T10 | 1719-1831 | Sentence | denotes | This provides insight information into the molecular mechanism of the anticancer activity of this fungal lectin. |
GlyCosmos15-FMA
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T1 | 519-524 | Body_part | denotes | colon | FMA:14543 |
| T2 | 526-532 | Body_part | denotes | breast | FMA:9601 |
| T3 | 692-697 | Body_part | denotes | colon | FMA:14543 |
GlyCosmos15-MAT
| Id | Subject | Object | Predicate | Lexical cue | mat_id |
|---|---|---|---|---|---|
| T1 | 519-524 | Body_part | denotes | colon | http://purl.obolibrary.org/obo/MAT_0000526 |
| T2 | 692-697 | Body_part | denotes | colon | http://purl.obolibrary.org/obo/MAT_0000526 |
NCBITAXON
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T1 | 44-62 | OrganismTaxon | denotes | Sclerotium rolfsii | 39291 |
| T2 | 194-212 | OrganismTaxon | denotes | Sclerotium rolfsii | 39291 |
| T3 | 443-448 | OrganismTaxon | denotes | human | 9606 |
| T4 | 513-518 | OrganismTaxon | denotes | human | 9606 |
| T5 | 686-691 | OrganismTaxon | denotes | human | 9606 |
Anatomy-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T1 | 519-524 | Body_part | denotes | colon | http://purl.obolibrary.org/obo/UBERON_0001155 |
| T2 | 526-532 | Body_part | denotes | breast | http://purl.obolibrary.org/obo/UBERON_0000310 |
| T3 | 692-697 | Body_part | denotes | colon | http://purl.obolibrary.org/obo/UBERON_0001155 |
| T4 | 935-945 | Body_part | denotes | cell cycle | http://purl.obolibrary.org/obo/UBERON_2000098 |
| T5 | 1164-1174 | Body_part | denotes | cell cycle | http://purl.obolibrary.org/obo/UBERON_2000098 |
Anatomy-MAT
| Id | Subject | Object | Predicate | Lexical cue | mat_id |
|---|---|---|---|---|---|
| T1 | 519-524 | Body_part | denotes | colon | http://purl.obolibrary.org/obo/MAT_0000526 |
| T2 | 692-697 | Body_part | denotes | colon | http://purl.obolibrary.org/obo/MAT_0000526 |
CL-cell
| Id | Subject | Object | Predicate | Lexical cue | cl_id |
|---|---|---|---|---|---|
| T1 | 545-557 | Cell | denotes | cancer cells | http://purl.obolibrary.org/obo/CL:0001064 |
| T2 | 1566-1578 | Cell | denotes | cancer cells | http://purl.obolibrary.org/obo/CL:0001064 |