PubMed:26331536 JSONTXT

Annnotations TAB JSON ListView MergeView

{"target":"https://pubannotation.org/docs/sourcedb/PubMed/sourceid/26331536","sourcedb":"PubMed","sourceid":"26331536","source_url":"http://www.ncbi.nlm.nih.gov/pubmed/26331536","text":"Gain-of-function p53 mutants co-opt chromatin pathways to drive cancer growth.\nTP53 (which encodes p53 protein) is the most frequently mutated gene among all human cancers. Prevalent p53 missense mutations abrogate its tumour suppressive function and lead to a 'gain-of-function' (GOF) that promotes cancer. Here we show that p53 GOF mutants bind to and upregulate chromatin regulatory genes, including the methyltransferases MLL1 (also known as KMT2A), MLL2 (also known as KMT2D), and acetyltransferase MOZ (also known as KAT6A or MYST3), resulting in genome-wide increases of histone methylation and acetylation. Analysis of The Cancer Genome Atlas shows specific upregulation of MLL1, MLL2, and MOZ in p53 GOF patient-derived tumours, but not in wild-type p53 or p53 null tumours. Cancer cell proliferation is markedly lowered by genetic knockdown of MLL1 or by pharmacological inhibition of the MLL1 methyltransferase complex. Our study reveals a novel chromatin mechanism underlying the progression of tumours with GOF p53, and suggests new possibilities for designing combinatorial chromatin-based therapies for treating individual cancers driven by prevalent GOF p53 mutations.","tracks":[{"project":"kaiyin_test","denotations":[{"id":"T1","span":{"begin":183,"end":186},"obj":"Gene"},{"id":"T2","span":{"begin":187,"end":205},"obj":"Var"},{"id":"T3","span":{"begin":206,"end":214},"obj":"NegReg"},{"id":"T4","span":{"begin":219,"end":246},"obj":"CPA"},{"id":"T5","span":{"begin":262,"end":278},"obj":"PosReg"},{"id":"T20","span":{"begin":291,"end":299},"obj":"PosReg"},{"id":"T21","span":{"begin":300,"end":306},"obj":"Disease"},{"id":"T8","span":{"begin":326,"end":329},"obj":"Gene"},{"id":"T9","span":{"begin":330,"end":333},"obj":"PosReg"},{"id":"T10","span":{"begin":334,"end":341},"obj":"Var"},{"id":"T11","span":{"begin":354,"end":364},"obj":"PosReg"},{"id":"T12","span":{"begin":365,"end":391},"obj":"Gene"},{"id":"T15","span":{"begin":407,"end":430},"obj":"Enzyme"},{"id":"T14","span":{"begin":454,"end":458},"obj":"Enzyme"},{"id":"T16","span":{"begin":486,"end":507},"obj":"Enzyme"},{"id":"T17","span":{"begin":565,"end":574},"obj":"PosReg"},{"id":"T18","span":{"begin":578,"end":597},"obj":"MPA"},{"id":"T19","span":{"begin":602,"end":613},"obj":"MPA"},{"id":"T27","span":{"begin":666,"end":678},"obj":"PosReg"},{"id":"T22","span":{"begin":682,"end":686},"obj":"Enzyme"},{"id":"T23","span":{"begin":688,"end":692},"obj":"Enzyme"},{"id":"T24","span":{"begin":698,"end":701},"obj":"Enzyme"},{"id":"T25","span":{"begin":705,"end":708},"obj":"Gene"},{"id":"T26","span":{"begin":709,"end":712},"obj":"Var"}],"relations":[{"id":"R1","pred":"ThemeOf","subj":"T1","obj":"T2"},{"id":"R10","pred":"ThemeOf","subj":"T14","obj":"T12"},{"id":"R11","pred":"ThemeOf","subj":"T16","obj":"T12"},{"id":"R12","pred":"CauseOf","subj":"T2","obj":"T20"},{"id":"R13","pred":"ThemeOf","subj":"T21","obj":"T20"},{"id":"R14","pred":"CauseOf","subj":"T11","obj":"T17"},{"id":"R15","pred":"ThemeOf","subj":"T18","obj":"T17"},{"id":"R16","pred":"ThemeOf","subj":"T19","obj":"T17"},{"id":"R17","pred":"ThemeOf","subj":"T25","obj":"T26"},{"id":"R18","pred":"CauseOf","subj":"T26","obj":"T27"},{"id":"R19","pred":"ThemeOf","subj":"T22","obj":"T27"},{"id":"R2","pred":"CauseOf","subj":"T2","obj":"T3"},{"id":"R20","pred":"ThemeOf","subj":"T23","obj":"T27"},{"id":"R21","pred":"ThemeOf","subj":"T24","obj":"T27"},{"id":"R3","pred":"ThemeOf","subj":"T4","obj":"T3"},{"id":"R4","pred":"CauseOf","subj":"T2","obj":"T5"},{"id":"R5","pred":"ThemeOf","subj":"T8","obj":"T10"},{"id":"R6","pred":"CauseOf","subj":"T10","obj":"T9"},{"id":"R7","pred":"CauseOf","subj":"T10","obj":"T11"},{"id":"R8","pred":"ThemeOf","subj":"T12","obj":"T11"},{"id":"R9","pred":"ThemeOf","subj":"T15","obj":"T12"}],"attributes":[{"subj":"T1","pred":"source","obj":"kaiyin_test"},{"subj":"T2","pred":"source","obj":"kaiyin_test"},{"subj":"T3","pred":"source","obj":"kaiyin_test"},{"subj":"T4","pred":"source","obj":"kaiyin_test"},{"subj":"T5","pred":"source","obj":"kaiyin_test"},{"subj":"T20","pred":"source","obj":"kaiyin_test"},{"subj":"T21","pred":"source","obj":"kaiyin_test"},{"subj":"T8","pred":"source","obj":"kaiyin_test"},{"subj":"T9","pred":"source","obj":"kaiyin_test"},{"subj":"T10","pred":"source","obj":"kaiyin_test"},{"subj":"T11","pred":"source","obj":"kaiyin_test"},{"subj":"T12","pred":"source","obj":"kaiyin_test"},{"subj":"T15","pred":"source","obj":"kaiyin_test"},{"subj":"T14","pred":"source","obj":"kaiyin_test"},{"subj":"T16","pred":"source","obj":"kaiyin_test"},{"subj":"T17","pred":"source","obj":"kaiyin_test"},{"subj":"T18","pred":"source","obj":"kaiyin_test"},{"subj":"T19","pred":"source","obj":"kaiyin_test"},{"subj":"T27","pred":"source","obj":"kaiyin_test"},{"subj":"T22","pred":"source","obj":"kaiyin_test"},{"subj":"T23","pred":"source","obj":"kaiyin_test"},{"subj":"T24","pred":"source","obj":"kaiyin_test"},{"subj":"T25","pred":"source","obj":"kaiyin_test"},{"subj":"T26","pred":"source","obj":"kaiyin_test"}]},{"project":"name_no","denotations":[{"id":"T1","span":{"begin":183,"end":186},"obj":"Gene"},{"id":"T2","span":{"begin":187,"end":205},"obj":"Var"},{"id":"T3","span":{"begin":206,"end":214},"obj":"NegReg"},{"id":"T4","span":{"begin":219,"end":246},"obj":"CPA"},{"id":"T5","span":{"begin":262,"end":278},"obj":"PosReg"},{"id":"T20","span":{"begin":291,"end":299},"obj":"PosReg"},{"id":"T21","span":{"begin":300,"end":306},"obj":"Disease"},{"id":"T8","span":{"begin":326,"end":329},"obj":"Gene"},{"id":"T9","span":{"begin":330,"end":333},"obj":"PosReg"},{"id":"T10","span":{"begin":334,"end":341},"obj":"Var"},{"id":"T11","span":{"begin":354,"end":364},"obj":"PosReg"},{"id":"T12","span":{"begin":365,"end":391},"obj":"Gene"},{"id":"T15","span":{"begin":407,"end":430},"obj":"Enzyme"},{"id":"T14","span":{"begin":454,"end":458},"obj":"Enzyme"},{"id":"T16","span":{"begin":486,"end":507},"obj":"Enzyme"},{"id":"T17","span":{"begin":565,"end":574},"obj":"PosReg"},{"id":"T18","span":{"begin":578,"end":597},"obj":"MPA"},{"id":"T19","span":{"begin":602,"end":613},"obj":"MPA"},{"id":"T27","span":{"begin":666,"end":678},"obj":"PosReg"},{"id":"T22","span":{"begin":682,"end":686},"obj":"Enzyme"},{"id":"T23","span":{"begin":688,"end":692},"obj":"Enzyme"},{"id":"T24","span":{"begin":698,"end":701},"obj":"Enzyme"},{"id":"T25","span":{"begin":705,"end":708},"obj":"Gene"},{"id":"T26","span":{"begin":709,"end":712},"obj":"Var"}],"relations":[{"id":"R1","pred":"ThemeOf","subj":"T1","obj":"T2"},{"id":"R10","pred":"ThemeOf","subj":"T14","obj":"T12"},{"id":"R11","pred":"ThemeOf","subj":"T16","obj":"T12"},{"id":"R12","pred":"CauseOf","subj":"T2","obj":"T20"},{"id":"R13","pred":"ThemeOf","subj":"T21","obj":"T20"},{"id":"R14","pred":"CauseOf","subj":"T11","obj":"T17"},{"id":"R15","pred":"ThemeOf","subj":"T18","obj":"T17"},{"id":"R16","pred":"ThemeOf","subj":"T19","obj":"T17"},{"id":"R17","pred":"ThemeOf","subj":"T25","obj":"T26"},{"id":"R18","pred":"CauseOf","subj":"T26","obj":"T27"},{"id":"R19","pred":"ThemeOf","subj":"T22","obj":"T27"},{"id":"R2","pred":"CauseOf","subj":"T2","obj":"T3"},{"id":"R20","pred":"ThemeOf","subj":"T23","obj":"T27"},{"id":"R21","pred":"ThemeOf","subj":"T24","obj":"T27"},{"id":"R3","pred":"ThemeOf","subj":"T4","obj":"T3"},{"id":"R4","pred":"CauseOf","subj":"T2","obj":"T5"},{"id":"R5","pred":"ThemeOf","subj":"T8","obj":"T10"},{"id":"R6","pred":"CauseOf","subj":"T10","obj":"T9"},{"id":"R7","pred":"CauseOf","subj":"T10","obj":"T11"},{"id":"R8","pred":"ThemeOf","subj":"T12","obj":"T11"},{"id":"R9","pred":"ThemeOf","subj":"T15","obj":"T12"}],"attributes":[{"subj":"T1","pred":"source","obj":"name_no"},{"subj":"T2","pred":"source","obj":"name_no"},{"subj":"T3","pred":"source","obj":"name_no"},{"subj":"T4","pred":"source","obj":"name_no"},{"subj":"T5","pred":"source","obj":"name_no"},{"subj":"T20","pred":"source","obj":"name_no"},{"subj":"T21","pred":"source","obj":"name_no"},{"subj":"T8","pred":"source","obj":"name_no"},{"subj":"T9","pred":"source","obj":"name_no"},{"subj":"T10","pred":"source","obj":"name_no"},{"subj":"T11","pred":"source","obj":"name_no"},{"subj":"T12","pred":"source","obj":"name_no"},{"subj":"T15","pred":"source","obj":"name_no"},{"subj":"T14","pred":"source","obj":"name_no"},{"subj":"T16","pred":"source","obj":"name_no"},{"subj":"T17","pred":"source","obj":"name_no"},{"subj":"T18","pred":"source","obj":"name_no"},{"subj":"T19","pred":"source","obj":"name_no"},{"subj":"T27","pred":"source","obj":"name_no"},{"subj":"T22","pred":"source","obj":"name_no"},{"subj":"T23","pred":"source","obj":"name_no"},{"subj":"T24","pred":"source","obj":"name_no"},{"subj":"T25","pred":"source","obj":"name_no"},{"subj":"T26","pred":"source","obj":"name_no"}]},{"project":"sonoma2","denotations":[{"id":"T25","span":{"begin":454,"end":458},"obj":"GENE"},{"id":"T0","span":{"begin":0,"end":16},"obj":"POSREG"},{"id":"T1","span":{"begin":17,"end":20},"obj":"GENE"},{"id":"T2","span":{"begin":21,"end":28},"obj":"VAR"},{"id":"T3","span":{"begin":58,"end":63},"obj":"REG"},{"id":"T4","span":{"begin":64,"end":77},"obj":"CPA"},{"id":"T5","span":{"begin":64,"end":70},"obj":"DISEASE"},{"id":"T6","span":{"begin":79,"end":83},"obj":"GENE"},{"id":"T7","span":{"begin":99,"end":102},"obj":"GENE"},{"id":"T8","span":{"begin":164,"end":171},"obj":"DISEASE"},{"id":"T9","span":{"begin":183,"end":186},"obj":"GENE"},{"id":"T10","span":{"begin":196,"end":205},"obj":"VAR"},{"id":"T11","span":{"begin":206,"end":214},"obj":"NEGREG"},{"id":"T12","span":{"begin":219,"end":246},"obj":"MPA"},{"id":"T13","span":{"begin":219,"end":225},"obj":"DISEASE"},{"id":"T14","span":{"begin":251,"end":255},"obj":"REG"},{"id":"T15","span":{"begin":262,"end":278},"obj":"POSREG"},{"id":"T16","span":{"begin":281,"end":284},"obj":"POSREG"},{"id":"T17","span":{"begin":291,"end":299},"obj":"POSREG"},{"id":"T18","span":{"begin":300,"end":306},"obj":"DISEASE"},{"id":"T19","span":{"begin":326,"end":329},"obj":"GENE"},{"id":"T20","span":{"begin":330,"end":333},"obj":"POSREG"},{"id":"T21","span":{"begin":334,"end":341},"obj":"VAR"},{"id":"T22","span":{"begin":354,"end":364},"obj":"POSREG"},{"id":"T23","span":{"begin":426,"end":430},"obj":"GENE"},{"id":"T24","span":{"begin":446,"end":451},"obj":"GENE"},{"id":"T26","span":{"begin":474,"end":479},"obj":"GENE"},{"id":"T27","span":{"begin":504,"end":507},"obj":"GENE"},{"id":"T28","span":{"begin":523,"end":528},"obj":"GENE"},{"id":"T29","span":{"begin":532,"end":537},"obj":"GENE"},{"id":"T30","span":{"begin":565,"end":574},"obj":"POSREG"},{"id":"T31","span":{"begin":602,"end":613},"obj":"MPA"},{"id":"T32","span":{"begin":631,"end":637},"obj":"DISEASE"},{"id":"T33","span":{"begin":666,"end":678},"obj":"POSREG"},{"id":"T34","span":{"begin":682,"end":686},"obj":"GENE"},{"id":"T35","span":{"begin":688,"end":692},"obj":"GENE"},{"id":"T36","span":{"begin":698,"end":701},"obj":"GENE"},{"id":"T37","span":{"begin":705,"end":708},"obj":"GENE"},{"id":"T38","span":{"begin":709,"end":712},"obj":"POSREG"},{"id":"T39","span":{"begin":729,"end":736},"obj":"DISEASE"},{"id":"T40","span":{"begin":759,"end":762},"obj":"GENE"},{"id":"T41","span":{"begin":766,"end":769},"obj":"GENE"},{"id":"T42","span":{"begin":775,"end":782},"obj":"DISEASE"},{"id":"T43","span":{"begin":784,"end":790},"obj":"DISEASE"},{"id":"T44","span":{"begin":796,"end":809},"obj":"CPA"},{"id":"T45","span":{"begin":822,"end":829},"obj":"NEGREG"},{"id":"T46","span":{"begin":854,"end":858},"obj":"GENE"},{"id":"T47","span":{"begin":881,"end":891},"obj":"NEGREG"},{"id":"T48","span":{"begin":899,"end":903},"obj":"GENE"},{"id":"T49","span":{"begin":992,"end":1003},"obj":"CPA"},{"id":"T50","span":{"begin":1007,"end":1014},"obj":"DISEASE"},{"id":"T51","span":{"begin":1020,"end":1023},"obj":"POSREG"},{"id":"T52","span":{"begin":1024,"end":1027},"obj":"GENE"},{"id":"T53","span":{"begin":1138,"end":1145},"obj":"DISEASE"},{"id":"T54","span":{"begin":1166,"end":1169},"obj":"POSREG"},{"id":"T55","span":{"begin":1170,"end":1173},"obj":"GENE"}],"relations":[{"id":"R0","pred":"CauseOf","subj":"T0","obj":"T3"},{"id":"R1","pred":"ThemeOf","subj":"T1","obj":"T2"},{"id":"R2","pred":"CauseOf","subj":"T2","obj":"T0"},{"id":"R3","pred":"CauseOf","subj":"T2","obj":"T3"},{"id":"R4","pred":"ThemeOf","subj":"T4","obj":"T0"},{"id":"R5","pred":"ThemeOf","subj":"T4","obj":"T3"},{"id":"R6","pred":"ThemeOf","subj":"T9","obj":"T10"},{"id":"R7","pred":"CauseOf","subj":"T10","obj":"T11"},{"id":"R8","pred":"CauseOf","subj":"T10","obj":"T14"},{"id":"R9","pred":"CauseOf","subj":"T10","obj":"T15"},{"id":"R10","pred":"CauseOf","subj":"T10","obj":"T16"},{"id":"R11","pred":"CauseOf","subj":"T10","obj":"T17"},{"id":"R12","pred":"CauseOf","subj":"T11","obj":"T15"},{"id":"R13","pred":"ThemeOf","subj":"T12","obj":"T11"},{"id":"R14","pred":"CauseOf","subj":"T15","obj":"T14"},{"id":"R15","pred":"CauseOf","subj":"T16","obj":"T15"},{"id":"R16","pred":"CauseOf","subj":"T15","obj":"T17"},{"id":"R17","pred":"CauseOf","subj":"T16","obj":"T14"},{"id":"R18","pred":"CauseOf","subj":"T16","obj":"T17"},{"id":"R19","pred":"ThemeOf","subj":"T18","obj":"T14"},{"id":"R20","pred":"ThemeOf","subj":"T18","obj":"T15"},{"id":"R21","pred":"ThemeOf","subj":"T18","obj":"T16"},{"id":"R22","pred":"ThemeOf","subj":"T18","obj":"T17"},{"id":"R23","pred":"ThemeOf","subj":"T19","obj":"T21"},{"id":"R24","pred":"CauseOf","subj":"T20","obj":"T30"},{"id":"R25","pred":"CauseOf","subj":"T21","obj":"T20"},{"id":"R26","pred":"CauseOf","subj":"T21","obj":"T22"},{"id":"R27","pred":"CauseOf","subj":"T21","obj":"T30"},{"id":"R28","pred":"CauseOf","subj":"T22","obj":"T30"},{"id":"R29","pred":"ThemeOf","subj":"T23","obj":"T22"},{"id":"R30","pred":"ThemeOf","subj":"T24","obj":"T22"},{"id":"R31","pred":"ThemeOf","subj":"T25","obj":"T21"},{"id":"R32","pred":"ThemeOf","subj":"T25","obj":"T22"},{"id":"R33","pred":"ThemeOf","subj":"T26","obj":"T22"},{"id":"R34","pred":"ThemeOf","subj":"T27","obj":"T22"},{"id":"R35","pred":"ThemeOf","subj":"T28","obj":"T22"},{"id":"R36","pred":"ThemeOf","subj":"T29","obj":"T21"},{"id":"R37","pred":"ThemeOf","subj":"T29","obj":"T22"},{"id":"R38","pred":"ThemeOf","subj":"T31","obj":"T22"},{"id":"R39","pred":"ThemeOf","subj":"T31","obj":"T30"},{"id":"R40","pred":"CauseOf","subj":"T38","obj":"T33"},{"id":"R41","pred":"ThemeOf","subj":"T34","obj":"T33"},{"id":"R42","pred":"ThemeOf","subj":"T35","obj":"T33"},{"id":"R43","pred":"ThemeOf","subj":"T36","obj":"T33"},{"id":"R44","pred":"CauseOf","subj":"T47","obj":"T45"},{"id":"R45","pred":"ThemeOf","subj":"T50","obj":"T49"},{"id":"R46","pred":"ThemeOf","subj":"T49","obj":"T51"},{"id":"R47","pred":"ThemeOf","subj":"T50","obj":"T51"}],"attributes":[{"subj":"T25","pred":"source","obj":"sonoma2"},{"subj":"T0","pred":"source","obj":"sonoma2"},{"subj":"T1","pred":"source","obj":"sonoma2"},{"subj":"T2","pred":"source","obj":"sonoma2"},{"subj":"T3","pred":"source","obj":"sonoma2"},{"subj":"T4","pred":"source","obj":"sonoma2"},{"subj":"T5","pred":"source","obj":"sonoma2"},{"subj":"T6","pred":"source","obj":"sonoma2"},{"subj":"T7","pred":"source","obj":"sonoma2"},{"subj":"T8","pred":"source","obj":"sonoma2"},{"subj":"T9","pred":"source","obj":"sonoma2"},{"subj":"T10","pred":"source","obj":"sonoma2"},{"subj":"T11","pred":"source","obj":"sonoma2"},{"subj":"T12","pred":"source","obj":"sonoma2"},{"subj":"T13","pred":"source","obj":"sonoma2"},{"subj":"T14","pred":"source","obj":"sonoma2"},{"subj":"T15","pred":"source","obj":"sonoma2"},{"subj":"T16","pred":"source","obj":"sonoma2"},{"subj":"T17","pred":"source","obj":"sonoma2"},{"subj":"T18","pred":"source","obj":"sonoma2"},{"subj":"T19","pred":"source","obj":"sonoma2"},{"subj":"T20","pred":"source","obj":"sonoma2"},{"subj":"T21","pred":"source","obj":"sonoma2"},{"subj":"T22","pred":"source","obj":"sonoma2"},{"subj":"T23","pred":"source","obj":"sonoma2"},{"subj":"T24","pred":"source","obj":"sonoma2"},{"subj":"T26","pred":"source","obj":"sonoma2"},{"subj":"T27","pred":"source","obj":"sonoma2"},{"subj":"T28","pred":"source","obj":"sonoma2"},{"subj":"T29","pred":"source","obj":"sonoma2"},{"subj":"T30","pred":"source","obj":"sonoma2"},{"subj":"T31","pred":"source","obj":"sonoma2"},{"subj":"T32","pred":"source","obj":"sonoma2"},{"subj":"T33","pred":"source","obj":"sonoma2"},{"subj":"T34","pred":"source","obj":"sonoma2"},{"subj":"T35","pred":"source","obj":"sonoma2"},{"subj":"T36","pred":"source","obj":"sonoma2"},{"subj":"T37","pred":"source","obj":"sonoma2"},{"subj":"T38","pred":"source","obj":"sonoma2"},{"subj":"T39","pred":"source","obj":"sonoma2"},{"subj":"T40","pred":"source","obj":"sonoma2"},{"subj":"T41","pred":"source","obj":"sonoma2"},{"subj":"T42","pred":"source","obj":"sonoma2"},{"subj":"T43","pred":"source","obj":"sonoma2"},{"subj":"T44","pred":"source","obj":"sonoma2"},{"subj":"T45","pred":"source","obj":"sonoma2"},{"subj":"T46","pred":"source","obj":"sonoma2"},{"subj":"T47","pred":"source","obj":"sonoma2"},{"subj":"T48","pred":"source","obj":"sonoma2"},{"subj":"T49","pred":"source","obj":"sonoma2"},{"subj":"T50","pred":"source","obj":"sonoma2"},{"subj":"T51","pred":"source","obj":"sonoma2"},{"subj":"T52","pred":"source","obj":"sonoma2"},{"subj":"T53","pred":"source","obj":"sonoma2"},{"subj":"T54","pred":"source","obj":"sonoma2"},{"subj":"T55","pred":"source","obj":"sonoma2"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"kaiyin_test","color":"#ec93c1","default":true},{"id":"name_no","color":"#93dbec"},{"id":"sonoma2","color":"#ece393"}]}]}}