PubMed:26270232 / 660-927
Annnotations
Inflammaging
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T8 | 0-267 | Sentence | denotes | Serum concentrations of CRP, neopterin and IL-6 as markers of inflammation and thrombopoietin (TPO), GCSF, FGF basic and VEGF, HMGB1, CK-18 (M65) and CK18 fragment (M30) and a panel of proinflammatory chemokines (CCL2, CCL3, CCL4, CCL5, CXCL5 and IL-8) were measured. |
| T8 | 0-267 | Sentence | denotes | Serum concentrations of CRP, neopterin and IL-6 as markers of inflammation and thrombopoietin (TPO), GCSF, FGF basic and VEGF, HMGB1, CK-18 (M65) and CK18 fragment (M30) and a panel of proinflammatory chemokines (CCL2, CCL3, CCL4, CCL5, CXCL5 and IL-8) were measured. |
LitCoin-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T8 | 0-267 | Sentence | denotes | Serum concentrations of CRP, neopterin and IL-6 as markers of inflammation and thrombopoietin (TPO), GCSF, FGF basic and VEGF, HMGB1, CK-18 (M65) and CK18 fragment (M30) and a panel of proinflammatory chemokines (CCL2, CCL3, CCL4, CCL5, CXCL5 and IL-8) were measured. |
LitCoin-entities
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| 10771 | 24-27 | GeneOrGeneProduct | denotes | CRP | NCBIGene:1401 |
| 10772 | 29-38 | ChemicalEntity | denotes | neopterin | MESH:D019798 |
| 10773 | 43-47 | GeneOrGeneProduct | denotes | IL-6 | NCBIGene:3569 |
| 10774 | 62-74 | DiseaseOrPhenotypicFeature | denotes | inflammation | MESH:D007249 |
| 10775 | 79-93 | GeneOrGeneProduct | denotes | thrombopoietin | NCBIGene:7066 |
| 10776 | 95-98 | GeneOrGeneProduct | denotes | TPO | NCBIGene:7066 |
| 10777 | 101-105 | GeneOrGeneProduct | denotes | GCSF | NCBIGene:1440 |
| 10778 | 107-116 | GeneOrGeneProduct | denotes | FGF basic | NCBIGene:2247 |
| 10779 | 121-125 | GeneOrGeneProduct | denotes | VEGF | NCBIGene:7422 |
| 10780 | 127-132 | GeneOrGeneProduct | denotes | HMGB1 | NCBIGene:3146 |
| 10781 | 134-139 | GeneOrGeneProduct | denotes | CK-18 | NCBIGene:3875 |
| 10782 | 150-154 | GeneOrGeneProduct | denotes | CK18 | NCBIGene:3875 |
| 10783 | 185-211 | GeneOrGeneProduct | denotes | proinflammatory chemokines | NCBIGene:3576|NCBIGene:6347|NCBIGene:6348|NCBIGene:6351|NCBIGene:6352|NCBIGene:6374 |
| 10784 | 213-217 | GeneOrGeneProduct | denotes | CCL2 | NCBIGene:6347 |
| 10785 | 219-223 | GeneOrGeneProduct | denotes | CCL3 | NCBIGene:6348 |
| 10786 | 225-229 | GeneOrGeneProduct | denotes | CCL4 | NCBIGene:6351 |
| 10787 | 231-235 | GeneOrGeneProduct | denotes | CCL5 | NCBIGene:6352 |
| 10788 | 237-242 | GeneOrGeneProduct | denotes | CXCL5 | NCBIGene:6374 |
| 10789 | 247-251 | GeneOrGeneProduct | denotes | IL-8 | NCBIGene:3576 |
LitCoin-GeneOrGeneProduct-v2
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T11 | 43-47 | GeneOrGeneProduct | denotes | IL-6 |
| T12 | 79-93 | GeneOrGeneProduct | denotes | thrombopoietin |
| T13 | 95-98 | GeneOrGeneProduct | denotes | TPO |
| T14 | 101-105 | GeneOrGeneProduct | denotes | GCSF |
| T15 | 121-125 | GeneOrGeneProduct | denotes | VEGF |
| T16 | 127-132 | GeneOrGeneProduct | denotes | HMGB1 |
| T17 | 134-139 | GeneOrGeneProduct | denotes | CK-18 |
| T18 | 150-154 | GeneOrGeneProduct | denotes | CK18 |
| T19 | 201-211 | GeneOrGeneProduct | denotes | chemokines |
| T20 | 213-217 | GeneOrGeneProduct | denotes | CCL2 |
| T21 | 219-223 | GeneOrGeneProduct | denotes | CCL3 |
| T22 | 225-229 | GeneOrGeneProduct | denotes | CCL4 |
| T23 | 231-235 | GeneOrGeneProduct | denotes | CCL5 |
| T24 | 237-242 | GeneOrGeneProduct | denotes | CXCL5 |
| T25 | 247-251 | GeneOrGeneProduct | denotes | IL-8 |
LitCoin-GeneOrGeneProduct-v0
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T17 | 43-47 | GeneOrGeneProduct | denotes | IL-6 |
| T18 | 79-93 | GeneOrGeneProduct | denotes | thrombopoietin |
| T19 | 95-98 | GeneOrGeneProduct | denotes | TPO |
| T20 | 101-105 | GeneOrGeneProduct | denotes | GCSF |
| T21 | 107-110 | GeneOrGeneProduct | denotes | FGF |
| T22 | 121-125 | GeneOrGeneProduct | denotes | VEGF |
| T23 | 127-132 | GeneOrGeneProduct | denotes | HMGB1 |
| T24 | 134-139 | GeneOrGeneProduct | denotes | CK-18 |
| T25 | 150-154 | GeneOrGeneProduct | denotes | CK18 |
| T26 | 201-211 | GeneOrGeneProduct | denotes | chemokines |
| T27 | 213-217 | GeneOrGeneProduct | denotes | CCL2 |
| T28 | 219-223 | GeneOrGeneProduct | denotes | CCL3 |
| T29 | 225-229 | GeneOrGeneProduct | denotes | CCL4 |
| T30 | 231-235 | GeneOrGeneProduct | denotes | CCL5 |
| T31 | 237-242 | GeneOrGeneProduct | denotes | CXCL5 |
| T32 | 247-251 | GeneOrGeneProduct | denotes | IL-8 |
LitCoin-Disease-MeSH
| Id | Subject | Object | Predicate | Lexical cue | originalLabel |
|---|---|---|---|---|---|
| T11 | 62-74 | DiseaseOrPhenotypicFeature | denotes | inflammation | D007249 |
| T12 | 185-200 | DiseaseOrPhenotypicFeature | denotes | proinflammatory | DISEASE |
LitCoin-GeneOrGeneProduct-v3
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T8 | 43-47 | GeneOrGeneProduct | denotes | IL-6 |
| T9 | 79-93 | GeneOrGeneProduct | denotes | thrombopoietin |
| T10 | 95-98 | GeneOrGeneProduct | denotes | TPO |
| T11 | 101-105 | GeneOrGeneProduct | denotes | GCSF |
| T12 | 121-125 | GeneOrGeneProduct | denotes | VEGF |
| T13 | 127-132 | GeneOrGeneProduct | denotes | HMGB1 |
| T14 | 134-139 | GeneOrGeneProduct | denotes | CK-18 |
| T15 | 150-154 | GeneOrGeneProduct | denotes | CK18 |
| T16 | 201-211 | GeneOrGeneProduct | denotes | chemokines |
| T17 | 213-217 | GeneOrGeneProduct | denotes | CCL2 |
| T18 | 219-223 | GeneOrGeneProduct | denotes | CCL3 |
| T19 | 225-229 | GeneOrGeneProduct | denotes | CCL4 |
| T20 | 231-235 | GeneOrGeneProduct | denotes | CCL5 |
| T21 | 237-242 | GeneOrGeneProduct | denotes | CXCL5 |
| T22 | 247-251 | GeneOrGeneProduct | denotes | IL-8 |
LitCoin_Mondo_095
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T7 | 134-136 | DiseaseOrPhenotypicFeature | denotes | CK | 0017941 |
LitCoin-MeSH-Disease-2
| Id | Subject | Object | Predicate | Lexical cue | ID: |
|---|---|---|---|---|---|
| T11 | 62-74 | DiseaseOrPhenotypicFeature | denotes | inflammation | DISEASE|D007249 |
| T13 | 185-200 | DiseaseOrPhenotypicFeature | denotes | proinflammatory | DISEASE |
LitCoin-MONDO_bioort2019
| Id | Subject | Object | Predicate | Lexical cue | #label |
|---|---|---|---|---|---|
| T10 | 62-74 | DiseaseOrPhenotypicFeature | denotes | inflammation | D007249 |
| T11 | 185-200 | DiseaseOrPhenotypicFeature | denotes | proinflammatory | DISEASE |
LitCoin-Chemical-MeSH-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | ID: |
|---|---|---|---|---|---|
| T3 | 29-38 | ChemicalEntity | denotes | neopterin | D019798|http://purl.obolibrary.org/obo/CHEBI_28670 |
| T5 | 237-242 | ChemicalEntity | denotes | CXCL5 | http://purl.obolibrary.org/obo/CHEBI_138180 |
LitCoin-training-merged
| Id | Subject | Object | Predicate | Lexical cue | #label | ID: |
|---|---|---|---|---|---|---|
| T5 | 237-242 | ChemicalEntity | denotes | CXCL5 | http://purl.obolibrary.org/obo/CHEBI_138180 | |
| T3 | 29-38 | ChemicalEntity | denotes | neopterin | http://purl.obolibrary.org/obo/CHEBI_28670|D019798 | |
| T22 | 247-251 | GeneOrGeneProduct | denotes | IL-8 | ||
| T21 | 237-242 | GeneOrGeneProduct | denotes | CXCL5 | ||
| T20 | 231-235 | GeneOrGeneProduct | denotes | CCL5 | ||
| T19 | 225-229 | GeneOrGeneProduct | denotes | CCL4 | ||
| T18 | 219-223 | GeneOrGeneProduct | denotes | CCL3 | ||
| T17 | 213-217 | GeneOrGeneProduct | denotes | CCL2 | ||
| T16 | 201-211 | GeneOrGeneProduct | denotes | chemokines | ||
| T15 | 150-154 | GeneOrGeneProduct | denotes | CK18 | ||
| T14 | 134-139 | GeneOrGeneProduct | denotes | CK-18 | ||
| T13 | 127-132 | GeneOrGeneProduct | denotes | HMGB1 | ||
| T12 | 121-125 | GeneOrGeneProduct | denotes | VEGF | ||
| T11 | 101-105 | GeneOrGeneProduct | denotes | GCSF | ||
| T10 | 95-98 | GeneOrGeneProduct | denotes | TPO | ||
| T9 | 79-93 | GeneOrGeneProduct | denotes | thrombopoietin | ||
| T8 | 43-47 | GeneOrGeneProduct | denotes | IL-6 | ||
| T19134 | 185-200 | DiseaseOrPhenotypicFeature | denotes | proinflammatory | DISEASE | |
| T48125 | 62-74 | DiseaseOrPhenotypicFeature | denotes | inflammation | D007249 |