PubMed:26243630
Annnotations
OryzaGP_2021
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 1083-1087 | http://identifiers.org/oryzabase.gene/9630 | denotes | phr1 |
| T2 | 1083-1087 | http://identifiers.org/oryzabase.gene/620 | denotes | phr1 |
| T3 | 1088-1092 | http://identifiers.org/oryzabase.gene/19911 | denotes | phl1 |
| T4 | 1125-1129 | http://identifiers.org/oryzabase.gene/9255 | denotes | PHO2 |
| T5 | 1259-1263 | http://identifiers.org/oryzabase.gene/9630 | denotes | PHR1 |
| T6 | 1264-1268 | http://identifiers.org/oryzabase.gene/19911 | denotes | PHL1 |
| T7 | 1394-1398 | http://identifiers.org/oryzabase.gene/9255 | denotes | PHO2 |
| T59833 | 1083-1087 | http://identifiers.org/ricegap/LOC_Os04g53300 | denotes | phr1 |
| T78957 | 1083-1087 | http://identifiers.org/ricegap/LOC_Os03g21240 | denotes | phr1 |
| T59775 | 1088-1092 | http://identifiers.org/ricegap/LOC_Os02g04640 | denotes | phl1 |
| T12980 | 1125-1129 | http://identifiers.org/ricegap/LOC_Os05g48400 | denotes | PHO2 |
| T31167 | 1125-1129 | http://identifiers.org/ricegap/LOC_Os05g48390 | denotes | PHO2 |
| T89322 | 1259-1263 | http://identifiers.org/ricegap/LOC_Os03g21240 | denotes | PHR1 |
| T43379 | 1264-1268 | http://identifiers.org/ricegap/LOC_Os02g04640 | denotes | PHL1 |
| T8 | 1394-1398 | http://identifiers.org/ricegap/LOC_Os05g48400 | denotes | PHO2 |
| T9 | 1394-1398 | http://identifiers.org/ricegap/LOC_Os05g48390 | denotes | PHO2 |
| T35407 | 1083-1087 | http://identifiers.org/rapdb.locus/Os04g0624500 | denotes | phr1 |
| T91112 | 1083-1087 | http://identifiers.org/rapdb.locus/Os03g0329900 | denotes | phr1 |
| T62626 | 1088-1092 | http://identifiers.org/rapdb.locus/Os02g0139000 | denotes | phl1 |
| T2269 | 1125-1129 | http://identifiers.org/rapdb.locus/Os05g0557700 | denotes | PHO2 |
| T72614 | 1259-1263 | http://identifiers.org/rapdb.locus/Os03g0329900 | denotes | PHR1 |
| T59417 | 1264-1268 | http://identifiers.org/rapdb.locus/Os02g0139000 | denotes | PHL1 |
| T5463 | 1394-1398 | http://identifiers.org/rapdb.locus/Os05g0557700 | denotes | PHO2 |
| T66870 | 1125-1129 | http://identifiers.org/uniprot/B7F902 | denotes | PHO2 |
| T52047 | 1259-1263 | http://identifiers.org/uniprot/Q10LZ1 | denotes | PHR1 |
| T96499 | 1264-1268 | http://identifiers.org/uniprot/Q6YXZ4 | denotes | PHL1 |
| T67694 | 1394-1398 | http://identifiers.org/uniprot/B7F902 | denotes | PHO2 |
| M_0 | 1083-1092 | hunflair:NA:Gene | denotes | phr1;phl1 |
| M_1 | 815-820 | hunflair:NA:Gene | denotes | PSN11 |
| M_2 | 925-930 | hunflair:NA:Gene | denotes | PSN11 |
| M_3 | 1062-1067 | hunflair:NA:Gene | denotes | PSN11 |
| M_4 | 1147-1152 | hunflair:NA:Gene | denotes | PSN11 |
| M_5 | 1292-1297 | hunflair:NA:Gene | denotes | PSN11 |
| M_6 | 1259-1263 | hunflair:NA:Gene | denotes | PHR1 |
| M_7 | 1264-1268 | hunflair:NA:Gene | denotes | PHL1 |
| M_8 | 1116-1120 | hunflair:NA:Gene | denotes | PHO1 |
| M_9 | 1385-1389 | hunflair:NA:Gene | denotes | PHO1 |
| M_10 | 41-48 | hunflair:NA:Gene | denotes | PHOSTIN |
| M_11 | 428-435 | hunflair:NA:Gene | denotes | PHOSTIN |
| M_12 | 85-94 | hunflair:NA:Chemical | denotes | phosphate |
| M_13 | 189-198 | hunflair:NA:Chemical | denotes | phosphate |
| M_14 | 437-440 | hunflair:NA:Chemical | denotes | PSN |
| M_15 | 517-520 | hunflair:NA:Chemical | denotes | PSN |
| M_16 | 750-753 | hunflair:NA:Chemical | denotes | PSN |
| M_17 | 1470-1473 | hunflair:NA:Chemical | denotes | PSN |
| M_18 | 1125-1129 | hunflair:NA:Gene | denotes | PHO2 |
| M_19 | 1394-1398 | hunflair:NA:Gene | denotes | PHO2 |
| M_20 | 119-139 | hunflair:NA:Species | denotes | Arabidopsis thaliana |
| M_21 | 437-440 | hunflair:NA:Gene | denotes | PSN |
| M_22 | 517-520 | hunflair:NA:Gene | denotes | PSN |
| M_23 | 750-753 | hunflair:NA:Gene | denotes | PSN |
| M_24 | 1470-1473 | hunflair:NA:Gene | denotes | PSN |
| M_25 | 41-48 | hunflair:NA:Chemical | denotes | PHOSTIN |
| M_26 | 428-435 | hunflair:NA:Chemical | denotes | PHOSTIN |
| M_27 | 119-130 | hunflair:NA:Species | denotes | Arabidopsis |
| M_28 | 477-488 | hunflair:NA:Species | denotes | Arabidopsis |
OryzaGP_2021_v2
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 1083-1087 | http://identifiers.org/oryzabase.gene/620 | denotes | phr1 |
| T2 | 1125-1129 | http://identifiers.org/oryzabase.gene/9255 | denotes | PHO2 |
| T3 | 1259-1263 | http://identifiers.org/oryzabase.gene/9630 | denotes | PHR1 |
| T4 | 1264-1268 | http://identifiers.org/oryzabase.gene/19911 | denotes | PHL1 |
| T5 | 1394-1398 | http://identifiers.org/oryzabase.gene/9255 | denotes | PHO2 |
| T46911 | 1083-1087 | http://identifiers.org/rapdb.locus/Os04g0624500 | denotes | phr1 |
| T1701 | 1125-1129 | http://identifiers.org/rapdb.locus/Os05g0557700 | denotes | PHO2 |
| T49636 | 1259-1263 | http://identifiers.org/rapdb.locus/Os03g0329900 | denotes | PHR1 |
| T39049 | 1264-1268 | http://identifiers.org/rapdb.locus/Os02g0139000 | denotes | PHL1 |
| T63139 | 1394-1398 | http://identifiers.org/rapdb.locus/Os05g0557700 | denotes | PHO2 |
OryzaGP_2021_FLAIR
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| M_0 | 1083-1092 | hunflair:NA:Gene | denotes | phr1;phl1 |
| M_1 | 815-820 | hunflair:NA:Gene | denotes | PSN11 |
| M_2 | 925-930 | hunflair:NA:Gene | denotes | PSN11 |
| M_3 | 1062-1067 | hunflair:NA:Gene | denotes | PSN11 |
| M_4 | 1147-1152 | hunflair:NA:Gene | denotes | PSN11 |
| M_5 | 1292-1297 | hunflair:NA:Gene | denotes | PSN11 |
| M_6 | 1259-1263 | hunflair:NA:Gene | denotes | PHR1 |
| M_7 | 1264-1268 | hunflair:NA:Gene | denotes | PHL1 |
| M_8 | 1116-1120 | hunflair:NA:Gene | denotes | PHO1 |
| M_9 | 1385-1389 | hunflair:NA:Gene | denotes | PHO1 |
| M_10 | 41-48 | hunflair:NA:Gene | denotes | PHOSTIN |
| M_11 | 428-435 | hunflair:NA:Gene | denotes | PHOSTIN |
| M_12 | 85-94 | hunflair:NA:Chemical | denotes | phosphate |
| M_13 | 189-198 | hunflair:NA:Chemical | denotes | phosphate |
| M_14 | 437-440 | hunflair:NA:Chemical | denotes | PSN |
| M_15 | 517-520 | hunflair:NA:Chemical | denotes | PSN |
| M_16 | 750-753 | hunflair:NA:Chemical | denotes | PSN |
| M_17 | 1470-1473 | hunflair:NA:Chemical | denotes | PSN |
| M_18 | 1125-1129 | hunflair:NA:Gene | denotes | PHO2 |
| M_19 | 1394-1398 | hunflair:NA:Gene | denotes | PHO2 |
| M_20 | 119-139 | hunflair:NA:Species | denotes | Arabidopsis thaliana |
| M_21 | 437-440 | hunflair:NA:Gene | denotes | PSN |
| M_22 | 517-520 | hunflair:NA:Gene | denotes | PSN |
| M_23 | 750-753 | hunflair:NA:Gene | denotes | PSN |
| M_24 | 1470-1473 | hunflair:NA:Gene | denotes | PSN |
| M_25 | 41-48 | hunflair:NA:Chemical | denotes | PHOSTIN |
| M_26 | 428-435 | hunflair:NA:Chemical | denotes | PHOSTIN |
| M_27 | 119-130 | hunflair:NA:Species | denotes | Arabidopsis |
| M_28 | 477-488 | hunflair:NA:Species | denotes | Arabidopsis |
Oryza_sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-140 | Sentence | denotes | A chemical genetic strategy identify the PHOSTIN, a synthetic molecule that triggers phosphate starvation responses in Arabidopsis thaliana. |
| T2 | 141-215 | Sentence | denotes | Plants display numerous strategies to cope with phosphate (Pi)-deficiency. |
| T3 | 216-311 | Sentence | denotes | Despite multiple genetic studies, the molecular mechanisms of low-Pi-signalling remain unknown. |
| T4 | 312-736 | Sentence | denotes | To validate the interest of chemical genetics to investigate this pathway we discovered and analysed the effects of PHOSTIN (PSN), a drug mimicking Pi-starvation in Arabidopsis. We assessed the effects of PSN and structural analogues on the induction of Pi-deficiency responses in mutants and wild-type and followed their accumulation in plants organs by high pressure liquid chromotography (HPLC) or mass-spectrophotometry. |
| T5 | 737-857 | Sentence | denotes | We show that PSN is cleaved in the growth medium, releasing its active motif (PSN11), which accumulates in plants roots. |
| T6 | 858-985 | Sentence | denotes | Despite the overaccumulation of Pi in the roots of treated plants, PSN11 elicits both local and systemic Pi-starvation effects. |
| T7 | 986-1161 | Sentence | denotes | Nevertheless, albeit that the transcriptional activation of low-Pi genes by PSN11 is lost in the phr1;phl1 double mutant, neither PHO1 nor PHO2 are required for PSN11 effects. |
| T8 | 1162-1362 | Sentence | denotes | The range of local and systemic responses to Pi-starvation elicited, and their dependence on the PHR1/PHL1 function suggests that PSN11 affects an important and early step of Pi-starvation signalling. |
| T9 | 1363-1532 | Sentence | denotes | Its independence from PHO1 and PHO2 suggest the existence of unknown pathway(s), showing the usefulness of PSN and chemical genetics to bring new elements to this field. |