PubMed:26102294 / 384-627 JSONTXT

Annnotations TAB JSON ListView MergeView

{"target":"https://pubannotation.org/docs/sourcedb/PubMed/sourceid/26102294","sourcedb":"PubMed","sourceid":"26102294","source_url":"http://www.ncbi.nlm.nih.gov/pubmed/26102294","text":"Previously, we showed that following etoposide (ETO) treatment embryonal carcinoma PA-1 cells undergo a p53-dependent upregulation of OCT4A and p21Cip1 (governing self-renewal and regulating cell cycle inhibition and senescence, respectively).","tracks":[{"project":"LitCoin-sentences","denotations":[{"id":"T3","span":{"begin":0,"end":243},"obj":"Sentence"}],"attributes":[{"subj":"T3","pred":"source","obj":"LitCoin-sentences"}]},{"project":"LitCoin-entities","denotations":[{"id":"10708","span":{"begin":37,"end":46},"obj":"ChemicalEntity"},{"id":"10709","span":{"begin":48,"end":51},"obj":"ChemicalEntity"},{"id":"10710","span":{"begin":63,"end":82},"obj":"DiseaseOrPhenotypicFeature"},{"id":"10711","span":{"begin":83,"end":87},"obj":"CellLine"},{"id":"10712","span":{"begin":104,"end":107},"obj":"GeneOrGeneProduct"},{"id":"10713","span":{"begin":134,"end":139},"obj":"GeneOrGeneProduct"},{"id":"10714","span":{"begin":144,"end":151},"obj":"GeneOrGeneProduct"}],"attributes":[{"id":"A5","pred":"db_id","subj":"10708","obj":"MESH:D005047"},{"id":"A6","pred":"db_id","subj":"10709","obj":"MESH:D005047"},{"id":"A7","pred":"db_id","subj":"10710","obj":"MESH:D018236"},{"id":"A8","pred":"db_id","subj":"10711","obj":"NCBITaxon:9606"},{"id":"A9","pred":"db_id","subj":"10712","obj":"NCBIGene:7157"},{"id":"A10","pred":"db_id","subj":"10713","obj":"NCBIGene:5460"},{"id":"A11","pred":"db_id","subj":"10714","obj":"NCBIGene:1026"},{"subj":"10708","pred":"source","obj":"LitCoin-entities"},{"subj":"10709","pred":"source","obj":"LitCoin-entities"},{"subj":"10710","pred":"source","obj":"LitCoin-entities"},{"subj":"10711","pred":"source","obj":"LitCoin-entities"},{"subj":"10712","pred":"source","obj":"LitCoin-entities"},{"subj":"10713","pred":"source","obj":"LitCoin-entities"},{"subj":"10714","pred":"source","obj":"LitCoin-entities"}],"namespaces":[{"prefix":"_base","uri":"https://w3id.org/biolink/vocab/"},{"prefix":"MESH","uri":"http://id.nlm.nih.gov/mesh/"},{"prefix":"NCBITaxon","uri":"https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id="},{"prefix":"NCBIGene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"OMIM","uri":"https://www.omim.org/entry/"},{"prefix":"DBSNP","uri":"https://www.ncbi.nlm.nih.gov/snp/"}]},{"project":"LitCoin_Mondo","denotations":[{"id":"T3","span":{"begin":63,"end":82},"obj":"DiseaseOrPhenotypicFeature"},{"id":"T4","span":{"begin":73,"end":82},"obj":"DiseaseOrPhenotypicFeature"}],"attributes":[{"id":"A3","pred":"mondo_id","subj":"T3","obj":"0005440"},{"id":"A4","pred":"mondo_id","subj":"T4","obj":"0004993"},{"subj":"T3","pred":"source","obj":"LitCoin_Mondo"},{"subj":"T4","pred":"source","obj":"LitCoin_Mondo"}]},{"project":"LitCoin-GeneOrGeneProduct-v2","denotations":[{"id":"T2","span":{"begin":144,"end":151},"obj":"GeneOrGeneProduct"},{"id":"T3","span":{"begin":191,"end":201},"obj":"GeneOrGeneProduct"}],"attributes":[{"subj":"T2","pred":"source","obj":"LitCoin-GeneOrGeneProduct-v2"},{"subj":"T3","pred":"source","obj":"LitCoin-GeneOrGeneProduct-v2"}]},{"project":"LitCoin-GeneOrGeneProduct-v0","denotations":[{"id":"T9","span":{"begin":88,"end":93},"obj":"GeneOrGeneProduct"},{"id":"T10","span":{"begin":144,"end":151},"obj":"GeneOrGeneProduct"},{"id":"T11","span":{"begin":191,"end":201},"obj":"GeneOrGeneProduct"}],"attributes":[{"subj":"T9","pred":"source","obj":"LitCoin-GeneOrGeneProduct-v0"},{"subj":"T10","pred":"source","obj":"LitCoin-GeneOrGeneProduct-v0"},{"subj":"T11","pred":"source","obj":"LitCoin-GeneOrGeneProduct-v0"}]},{"project":"LitCoin-Disease-MeSH","denotations":[{"id":"T4","span":{"begin":63,"end":82},"obj":"DiseaseOrPhenotypicFeature"}],"attributes":[{"id":"A4","pred":"originalLabel","subj":"T4","obj":"D018236"},{"subj":"T4","pred":"source","obj":"LitCoin-Disease-MeSH"}]},{"project":"LitCoin-GeneOrGeneProduct-v3","denotations":[{"id":"T1","span":{"begin":144,"end":151},"obj":"GeneOrGeneProduct"}],"attributes":[{"subj":"T1","pred":"source","obj":"LitCoin-GeneOrGeneProduct-v3"}]},{"project":"LitCoin_Mondo_095","denotations":[{"id":"T4","span":{"begin":63,"end":82},"obj":"DiseaseOrPhenotypicFeature"}],"attributes":[{"id":"A4","pred":"mondo_id","subj":"T4","obj":"0018843"},{"id":"A5","pred":"mondo_id","subj":"T4","obj":"0005440"},{"id":"A6","pred":"mondo_id","subj":"T4","obj":"0003581"},{"subj":"T4","pred":"source","obj":"LitCoin_Mondo_095"}]},{"project":"LitCoin-MeSH-Disease-2","denotations":[{"id":"T5","span":{"begin":63,"end":82},"obj":"DiseaseOrPhenotypicFeature"}],"attributes":[{"id":"A5","pred":"ID:","subj":"T5","obj":"D018236"},{"subj":"T5","pred":"source","obj":"LitCoin-MeSH-Disease-2"}]},{"project":"LitCoin_CellLine","denotations":[{"id":"T1","span":{"begin":83,"end":87},"obj":"CellLine"}],"attributes":[{"id":"A1","pred":"cellosaurus_accession_id","subj":"T1","obj":"CVCL_0479"},{"subj":"T1","pred":"source","obj":"LitCoin_CellLine"}]},{"project":"LitCoin-MONDO_bioort2019","denotations":[{"id":"T4","span":{"begin":63,"end":82},"obj":"DiseaseOrPhenotypicFeature"}],"attributes":[{"id":"A4","pred":"#label","subj":"T4","obj":"D018236"},{"subj":"T4","pred":"source","obj":"LitCoin-MONDO_bioort2019"}]},{"project":"LitCoin-Chemical-MeSH-CHEBI","denotations":[{"id":"T4","span":{"begin":37,"end":46},"obj":"ChemicalEntity"},{"id":"T6","span":{"begin":48,"end":51},"obj":"ChemicalEntity"}],"attributes":[{"id":"A4","pred":"ID:","subj":"T4","obj":"D005047"},{"id":"A5","pred":"ID:","subj":"T4","obj":"http://purl.obolibrary.org/obo/CHEBI_4911"},{"id":"A6","pred":"ID:","subj":"T6","obj":"http://purl.obolibrary.org/obo/CHEBI_27561"},{"id":"A7","pred":"ID:","subj":"T6","obj":"D005047"},{"subj":"T4","pred":"source","obj":"LitCoin-Chemical-MeSH-CHEBI"},{"subj":"T6","pred":"source","obj":"LitCoin-Chemical-MeSH-CHEBI"}]},{"project":"LitCoin-training-merged","denotations":[{"id":"T1","span":{"begin":83,"end":87},"obj":"CellLine"},{"id":"T6","span":{"begin":48,"end":51},"obj":"ChemicalEntity"},{"id":"T4","span":{"begin":37,"end":46},"obj":"ChemicalEntity"},{"id":"T16086","span":{"begin":144,"end":151},"obj":"GeneOrGeneProduct"},{"id":"T62671","span":{"begin":63,"end":82},"obj":"DiseaseOrPhenotypicFeature"}],"attributes":[{"id":"A1","pred":"cellosaurus_accession_id","subj":"T1","obj":"CVCL_0479"},{"id":"A7","pred":"ID:","subj":"T6","obj":"D005047"},{"id":"A6","pred":"ID:","subj":"T6","obj":"http://purl.obolibrary.org/obo/CHEBI_27561"},{"id":"A5","pred":"ID:","subj":"T4","obj":"http://purl.obolibrary.org/obo/CHEBI_4911"},{"id":"A4","pred":"ID:","subj":"T4","obj":"D005047"},{"id":"A64319","pred":"#label","subj":"T62671","obj":"D018236"},{"subj":"T1","pred":"source","obj":"LitCoin-training-merged"},{"subj":"T6","pred":"source","obj":"LitCoin-training-merged"},{"subj":"T4","pred":"source","obj":"LitCoin-training-merged"},{"subj":"T16086","pred":"source","obj":"LitCoin-training-merged"},{"subj":"T62671","pred":"source","obj":"LitCoin-training-merged"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"LitCoin-sentences","color":"#93ecd0","default":true},{"id":"LitCoin-entities","color":"#ecb693"},{"id":"LitCoin_Mondo","color":"#9c93ec"},{"id":"LitCoin-GeneOrGeneProduct-v2","color":"#a4ec93"},{"id":"LitCoin-GeneOrGeneProduct-v0","color":"#ec93be"},{"id":"LitCoin-Disease-MeSH","color":"#93d8ec"},{"id":"LitCoin-GeneOrGeneProduct-v3","color":"#ece693"},{"id":"LitCoin_Mondo_095","color":"#cc93ec"},{"id":"LitCoin-MeSH-Disease-2","color":"#93ecb2"},{"id":"LitCoin_CellLine","color":"#ec9893"},{"id":"LitCoin-MONDO_bioort2019","color":"#93a7ec"},{"id":"LitCoin-Chemical-MeSH-CHEBI","color":"#c1ec93"},{"id":"LitCoin-training-merged","color":"#ec93db"}]}]}}