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OryzaGP_2021

Id Subject Object Predicate Lexical cue
T1 185-201 http://identifiers.org/oryzabase.gene/19290 denotes aminotransferase
T2 185-201 http://identifiers.org/oryzabase.gene/13867 denotes aminotransferase
T3 185-201 http://identifiers.org/oryzabase.gene/12483 denotes aminotransferase
T4 231-247 http://identifiers.org/oryzabase.gene/19290 denotes aminotransferase
T5 231-247 http://identifiers.org/oryzabase.gene/13867 denotes aminotransferase
T6 231-247 http://identifiers.org/oryzabase.gene/12483 denotes aminotransferase
T54766 111-128 http://identifiers.org/ricegap/LOC_Os05g15530 denotes aminotransferases
T21041 111-128 http://identifiers.org/ricegap/LOC_Os04g52450 denotes aminotransferases
T197 111-128 http://identifiers.org/ricegap/LOC_Os02g26800 denotes aminotransferases
T64181 185-201 http://identifiers.org/ricegap/LOC_Os05g15530 denotes aminotransferase
T49845 185-201 http://identifiers.org/ricegap/LOC_Os04g52450 denotes aminotransferase
T74914 185-201 http://identifiers.org/ricegap/LOC_Os02g26800 denotes aminotransferase
T7 231-247 http://identifiers.org/ricegap/LOC_Os05g15530 denotes aminotransferase
T8 231-247 http://identifiers.org/ricegap/LOC_Os04g52450 denotes aminotransferase
T9 231-247 http://identifiers.org/ricegap/LOC_Os02g26800 denotes aminotransferase
T95382 111-128 http://identifiers.org/rapdb.locus/Os05g0244700 denotes aminotransferases
T61742 111-128 http://identifiers.org/rapdb.locus/Os04g0614600 denotes aminotransferases
T22679 111-128 http://identifiers.org/rapdb.locus/Os02g0467500 denotes aminotransferases
T81856 185-201 http://identifiers.org/rapdb.locus/Os05g0244700 denotes aminotransferase
T27807 185-201 http://identifiers.org/rapdb.locus/Os04g0614600 denotes aminotransferase
T84271 185-201 http://identifiers.org/rapdb.locus/Os02g0467500 denotes aminotransferase
T37503 231-247 http://identifiers.org/rapdb.locus/Os05g0244700 denotes aminotransferase
T42242 231-247 http://identifiers.org/rapdb.locus/Os04g0614600 denotes aminotransferase
T1150 231-247 http://identifiers.org/rapdb.locus/Os02g0467500 denotes aminotransferase
T69747 185-201 http://identifiers.org/uniprot/Q01K11 denotes aminotransferase
T64489 185-201 http://identifiers.org/uniprot/B9EZW9 denotes aminotransferase
T9382 185-201 http://identifiers.org/refseq/NP_200593.2 denotes aminotransferase
T64434 231-247 http://identifiers.org/uniprot/Q01K11 denotes aminotransferase
T59517 231-247 http://identifiers.org/uniprot/B9EZW9 denotes aminotransferase
T85403 231-247 http://identifiers.org/refseq/NP_200593.2 denotes aminotransferase
M_0 68-77 hunflair:NA:Chemical denotes glutamate
M_1 164-173 hunflair:NA:Chemical denotes glutamate
M_2 748-757 hunflair:NA:Chemical denotes glutamate
M_3 871-880 hunflair:NA:Chemical denotes glutamate
M_4 412-419 hunflair:NA:Chemical denotes glycine
M_5 969-976 hunflair:NA:Chemical denotes glycine
M_6 1115-1122 hunflair:NA:Chemical denotes glycine
M_7 1196-1203 hunflair:NA:Chemical denotes glycine
M_8 1346-1353 hunflair:NA:Chemical denotes glycine
M_9 100-128 hunflair:NA:Gene denotes glyoxylate aminotransferases
M_10 93-99 hunflair:NA:Chemical denotes serine
M_11 213-219 hunflair:NA:Chemical denotes serine
M_12 788-794 hunflair:NA:Chemical denotes serine
M_13 893-899 hunflair:NA:Chemical denotes serine
M_14 1185-1191 hunflair:NA:Chemical denotes serine
M_15 1422-1428 hunflair:NA:Chemical denotes serine
M_16 1432-1447 hunflair:NA:Chemical denotes hydroxypyruvate
M_17 1055-1063 hunflair:NA:Chemical denotes nitrogen
M_18 164-201 hunflair:NA:Gene denotes glutamate:glyoxylate aminotransferase
M_19 132-136 hunflair:NA:Species denotes rice
M_20 581-585 hunflair:NA:Species denotes rice
M_21 814-818 hunflair:NA:Species denotes rice
M_22 1483-1487 hunflair:NA:Species denotes rice
M_23 78-88 hunflair:NA:Chemical denotes glyoxylate
M_24 100-110 hunflair:NA:Chemical denotes glyoxylate
M_25 174-184 hunflair:NA:Chemical denotes glyoxylate
M_26 220-230 hunflair:NA:Chemical denotes glyoxylate
M_27 398-408 hunflair:NA:Chemical denotes glyoxylate
M_28 733-743 hunflair:NA:Chemical denotes glyoxylate
M_29 773-783 hunflair:NA:Chemical denotes glyoxylate
M_30 950-960 hunflair:NA:Chemical denotes glyoxylate
M_31 1330-1340 hunflair:NA:Chemical denotes glyoxylate
M_32 213-247 hunflair:NA:Gene denotes serine:glyoxylate aminotransferase
M_33 249-253 hunflair:NA:Gene denotes SGAT
M_34 519-523 hunflair:NA:Gene denotes SGAT
M_35 763-767 hunflair:NA:Gene denotes SGAT
M_36 982-986 hunflair:NA:Gene denotes SGAT
M_37 993-997 hunflair:NA:Gene denotes SGAT
M_38 1240-1244 hunflair:NA:Gene denotes SGAT
M_39 1360-1364 hunflair:NA:Gene denotes SGAT
M_40 1055-1074 hunflair:NA:Disease denotes nitrogen deficiency
M_41 203-207 hunflair:NA:Gene denotes GGAT
M_42 510-514 hunflair:NA:Gene denotes GGAT
M_43 653-657 hunflair:NA:Gene denotes GGAT
M_44 918-922 hunflair:NA:Gene denotes GGAT
M_45 1001-1005 hunflair:NA:Gene denotes GGAT
M_46 1157-1161 hunflair:NA:Gene denotes GGAT
M_47 1282-1286 hunflair:NA:Gene denotes GGAT

OryzaGP_2022

Id Subject Object Predicate Lexical cue
T1 185-201 http://identifiers.org/oryzabase.gene/19290 denotes aminotransferase
T2 185-201 http://identifiers.org/oryzabase.gene/13867 denotes aminotransferase
T3 185-201 http://identifiers.org/oryzabase.gene/12483 denotes aminotransferase
T4 231-247 http://identifiers.org/oryzabase.gene/19290 denotes aminotransferase
T5 231-247 http://identifiers.org/oryzabase.gene/13867 denotes aminotransferase
T6 231-247 http://identifiers.org/oryzabase.gene/12483 denotes aminotransferase

OryzaGP_2021_FLAIR

Id Subject Object Predicate Lexical cue
M_0 68-77 hunflair:NA:Chemical denotes glutamate
M_1 164-173 hunflair:NA:Chemical denotes glutamate
M_2 748-757 hunflair:NA:Chemical denotes glutamate
M_3 871-880 hunflair:NA:Chemical denotes glutamate
M_4 412-419 hunflair:NA:Chemical denotes glycine
M_5 969-976 hunflair:NA:Chemical denotes glycine
M_6 1115-1122 hunflair:NA:Chemical denotes glycine
M_7 1196-1203 hunflair:NA:Chemical denotes glycine
M_8 1346-1353 hunflair:NA:Chemical denotes glycine
M_9 100-128 hunflair:NA:Gene denotes glyoxylate aminotransferases
M_10 93-99 hunflair:NA:Chemical denotes serine
M_11 213-219 hunflair:NA:Chemical denotes serine
M_12 788-794 hunflair:NA:Chemical denotes serine
M_13 893-899 hunflair:NA:Chemical denotes serine
M_14 1185-1191 hunflair:NA:Chemical denotes serine
M_15 1422-1428 hunflair:NA:Chemical denotes serine
M_16 1432-1447 hunflair:NA:Chemical denotes hydroxypyruvate
M_17 1055-1063 hunflair:NA:Chemical denotes nitrogen
M_18 164-201 hunflair:NA:Gene denotes glutamate:glyoxylate aminotransferase
M_19 132-136 hunflair:NA:Species denotes rice
M_20 581-585 hunflair:NA:Species denotes rice
M_21 814-818 hunflair:NA:Species denotes rice
M_22 1483-1487 hunflair:NA:Species denotes rice
M_23 78-88 hunflair:NA:Chemical denotes glyoxylate
M_24 100-110 hunflair:NA:Chemical denotes glyoxylate
M_25 174-184 hunflair:NA:Chemical denotes glyoxylate
M_26 220-230 hunflair:NA:Chemical denotes glyoxylate
M_27 398-408 hunflair:NA:Chemical denotes glyoxylate
M_28 733-743 hunflair:NA:Chemical denotes glyoxylate
M_29 773-783 hunflair:NA:Chemical denotes glyoxylate
M_30 950-960 hunflair:NA:Chemical denotes glyoxylate
M_31 1330-1340 hunflair:NA:Chemical denotes glyoxylate
M_32 213-247 hunflair:NA:Gene denotes serine:glyoxylate aminotransferase
M_33 249-253 hunflair:NA:Gene denotes SGAT
M_34 519-523 hunflair:NA:Gene denotes SGAT
M_35 763-767 hunflair:NA:Gene denotes SGAT
M_36 982-986 hunflair:NA:Gene denotes SGAT
M_37 993-997 hunflair:NA:Gene denotes SGAT
M_38 1240-1244 hunflair:NA:Gene denotes SGAT
M_39 1360-1364 hunflair:NA:Gene denotes SGAT
M_40 1055-1074 hunflair:NA:Disease denotes nitrogen deficiency
M_41 203-207 hunflair:NA:Gene denotes GGAT
M_42 510-514 hunflair:NA:Gene denotes GGAT
M_43 653-657 hunflair:NA:Gene denotes GGAT
M_44 918-922 hunflair:NA:Gene denotes GGAT
M_45 1001-1005 hunflair:NA:Gene denotes GGAT
M_46 1157-1161 hunflair:NA:Gene denotes GGAT
M_47 1282-1286 hunflair:NA:Gene denotes GGAT

Oryza_sentences

Id Subject Object Predicate Lexical cue
T1 0-137 Sentence denotes Distinct photorespiratory reactions are preferentially catalyzed by glutamate:glyoxylate and serine:glyoxylate aminotransferases in rice.
T2 138-454 Sentence denotes The metabolic function of glutamate:glyoxylate aminotransferase (GGAT) and serine:glyoxylate aminotransferase (SGAT) for photorespiration is still not exactly understood so far though it is mostly held that both enzymes may work in parallel in the reaction of glyoxylate to glycine during photorespiration of plants.
T3 455-640 Sentence denotes Here, for the first time, we define the genes encoding GGAT and SGAT and report their biochemical and enzymatic properties in rice plants, in contrast to those from other plant species.
T4 641-987 Sentence denotes Noticeably, GGAT exhibited approximately 18 fold higher catalytic efficiency (Kcat/Km) with glyoxylate and glutamate than SGAT with glyoxylate and serine, and additionally, rice leaves usually contain 3-4times higher abundance of glutamate relative to serine, implicating that GGAT may preferentially utilize glyoxylate to form glycine over SGAT.
T5 988-1256 Sentence denotes When SGAT or GGAT activity was regulated by gene transformation or nitrogen deficiency, respectively, it was observed that the glycine content was positively related to GGAT activities, while both serine and glycine contents were negatively related to SGAT activities.
T6 1257-1488 Sentence denotes The results suggest that GGAT preferentially catalyzes the conversion of glyoxylate into glycine while SGAT is mainly responsible for the transamination reaction of serine to hydroxypyruvate in the photorespiratory pathway of rice.

Oryza_sentences

Id Subject Object Predicate Lexical cue
T1 0-137 Sentence denotes Distinct photorespiratory reactions are preferentially catalyzed by glutamate:glyoxylate and serine:glyoxylate aminotransferases in rice.
T2 138-454 Sentence denotes The metabolic function of glutamate:glyoxylate aminotransferase (GGAT) and serine:glyoxylate aminotransferase (SGAT) for photorespiration is still not exactly understood so far though it is mostly held that both enzymes may work in parallel in the reaction of glyoxylate to glycine during photorespiration of plants.
T3 455-640 Sentence denotes Here, for the first time, we define the genes encoding GGAT and SGAT and report their biochemical and enzymatic properties in rice plants, in contrast to those from other plant species.
T4 641-987 Sentence denotes Noticeably, GGAT exhibited approximately 18 fold higher catalytic efficiency (Kcat/Km) with glyoxylate and glutamate than SGAT with glyoxylate and serine, and additionally, rice leaves usually contain 3-4times higher abundance of glutamate relative to serine, implicating that GGAT may preferentially utilize glyoxylate to form glycine over SGAT.
T5 988-1256 Sentence denotes When SGAT or GGAT activity was regulated by gene transformation or nitrogen deficiency, respectively, it was observed that the glycine content was positively related to GGAT activities, while both serine and glycine contents were negatively related to SGAT activities.
T6 1257-1488 Sentence denotes The results suggest that GGAT preferentially catalyzes the conversion of glyoxylate into glycine while SGAT is mainly responsible for the transamination reaction of serine to hydroxypyruvate in the photorespiratory pathway of rice.

Oryza_sentences

Id Subject Object Predicate Lexical cue
T1 0-137 Sentence denotes Distinct photorespiratory reactions are preferentially catalyzed by glutamate:glyoxylate and serine:glyoxylate aminotransferases in rice.
T2 138-454 Sentence denotes The metabolic function of glutamate:glyoxylate aminotransferase (GGAT) and serine:glyoxylate aminotransferase (SGAT) for photorespiration is still not exactly understood so far though it is mostly held that both enzymes may work in parallel in the reaction of glyoxylate to glycine during photorespiration of plants.
T3 455-640 Sentence denotes Here, for the first time, we define the genes encoding GGAT and SGAT and report their biochemical and enzymatic properties in rice plants, in contrast to those from other plant species.
T4 641-987 Sentence denotes Noticeably, GGAT exhibited approximately 18 fold higher catalytic efficiency (Kcat/Km) with glyoxylate and glutamate than SGAT with glyoxylate and serine, and additionally, rice leaves usually contain 3-4times higher abundance of glutamate relative to serine, implicating that GGAT may preferentially utilize glyoxylate to form glycine over SGAT.
T5 988-1256 Sentence denotes When SGAT or GGAT activity was regulated by gene transformation or nitrogen deficiency, respectively, it was observed that the glycine content was positively related to GGAT activities, while both serine and glycine contents were negatively related to SGAT activities.
T6 1257-1488 Sentence denotes The results suggest that GGAT preferentially catalyzes the conversion of glyoxylate into glycine while SGAT is mainly responsible for the transamination reaction of serine to hydroxypyruvate in the photorespiratory pathway of rice.

Oryza_sentences

Id Subject Object Predicate Lexical cue
T1 0-137 Sentence denotes Distinct photorespiratory reactions are preferentially catalyzed by glutamate:glyoxylate and serine:glyoxylate aminotransferases in rice.
T2 138-454 Sentence denotes The metabolic function of glutamate:glyoxylate aminotransferase (GGAT) and serine:glyoxylate aminotransferase (SGAT) for photorespiration is still not exactly understood so far though it is mostly held that both enzymes may work in parallel in the reaction of glyoxylate to glycine during photorespiration of plants.
T3 455-640 Sentence denotes Here, for the first time, we define the genes encoding GGAT and SGAT and report their biochemical and enzymatic properties in rice plants, in contrast to those from other plant species.
T4 641-987 Sentence denotes Noticeably, GGAT exhibited approximately 18 fold higher catalytic efficiency (Kcat/Km) with glyoxylate and glutamate than SGAT with glyoxylate and serine, and additionally, rice leaves usually contain 3-4times higher abundance of glutamate relative to serine, implicating that GGAT may preferentially utilize glyoxylate to form glycine over SGAT.
T5 988-1256 Sentence denotes When SGAT or GGAT activity was regulated by gene transformation or nitrogen deficiency, respectively, it was observed that the glycine content was positively related to GGAT activities, while both serine and glycine contents were negatively related to SGAT activities.
T6 1257-1488 Sentence denotes The results suggest that GGAT preferentially catalyzes the conversion of glyoxylate into glycine while SGAT is mainly responsible for the transamination reaction of serine to hydroxypyruvate in the photorespiratory pathway of rice.