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OryzaGP_2021

Id Subject Object Predicate Lexical cue
M_0 528-534 hunflair:NA:Species denotes cotton
M_1 924-938 hunflair:NA:Gene denotes P35S promoters
M_2 131-155 hunflair:NA:Species denotes Cauliflower mosaic virus
M_3 157-161 hunflair:NA:Species denotes CaMV

OryzaGP_2021_FLAIR

Id Subject Object Predicate Lexical cue
M_0 528-534 hunflair:NA:Species denotes cotton
M_1 924-938 hunflair:NA:Gene denotes P35S promoters
M_2 131-155 hunflair:NA:Species denotes Cauliflower mosaic virus
M_3 157-161 hunflair:NA:Species denotes CaMV

Oryza_sentences

Id Subject Object Predicate Lexical cue
T1 0-126 Sentence denotes Development of a general method for detection and quantification of the P35S promoter based on assessment of existing methods.
T2 127-264 Sentence denotes The Cauliflower mosaic virus (CaMV) 35S promoter (P35S) is a commonly used target for detection of genetically modified organisms (GMOs).
T3 265-365 Sentence denotes There are currently 24 reported detection methods, targeting different regions of the P35S promoter.
T4 366-600 Sentence denotes Initial assessment revealed that due to the absence of primer binding sites in the P35S sequence, 19 of the 24 reported methods failed to detect P35S in MON88913 cotton, and the other two methods could only be applied to certain GMOs.
T5 601-832 Sentence denotes The rest three reported methods were not suitable for measurement of P35S in some testing events, because SNPs in binding sites of the primer/probe would result in abnormal amplification plots and poor linear regression parameters.
T6 833-1069 Sentence denotes In this study, we discovered a conserved region in the P35S sequence through sequencing of P35S promoters from multiple transgenic events, and developed new qualitative and quantitative detection systems targeting this conserved region.
T7 1070-1183 Sentence denotes The qualitative PCR could detect the P35S promoter in 23 unique GMO events with high specificity and sensitivity.
T8 1184-1349 Sentence denotes The quantitative method was suitable for measurement of P35S promoter, exhibiting good agreement between the amount of template and Ct values for each testing event.
T9 1350-1447 Sentence denotes This study provides a general P35S screening method, with greater coverage than existing methods.

Oryza_sentences

Id Subject Object Predicate Lexical cue
T1 0-126 Sentence denotes Development of a general method for detection and quantification of the P35S promoter based on assessment of existing methods.
T2 127-264 Sentence denotes The Cauliflower mosaic virus (CaMV) 35S promoter (P35S) is a commonly used target for detection of genetically modified organisms (GMOs).
T3 265-365 Sentence denotes There are currently 24 reported detection methods, targeting different regions of the P35S promoter.
T4 366-600 Sentence denotes Initial assessment revealed that due to the absence of primer binding sites in the P35S sequence, 19 of the 24 reported methods failed to detect P35S in MON88913 cotton, and the other two methods could only be applied to certain GMOs.
T5 601-832 Sentence denotes The rest three reported methods were not suitable for measurement of P35S in some testing events, because SNPs in binding sites of the primer/probe would result in abnormal amplification plots and poor linear regression parameters.
T6 833-1069 Sentence denotes In this study, we discovered a conserved region in the P35S sequence through sequencing of P35S promoters from multiple transgenic events, and developed new qualitative and quantitative detection systems targeting this conserved region.
T7 1070-1183 Sentence denotes The qualitative PCR could detect the P35S promoter in 23 unique GMO events with high specificity and sensitivity.
T8 1184-1349 Sentence denotes The quantitative method was suitable for measurement of P35S promoter, exhibiting good agreement between the amount of template and Ct values for each testing event.
T9 1350-1447 Sentence denotes This study provides a general P35S screening method, with greater coverage than existing methods.

Oryza_sentences

Id Subject Object Predicate Lexical cue
T1 0-126 Sentence denotes Development of a general method for detection and quantification of the P35S promoter based on assessment of existing methods.
T2 127-264 Sentence denotes The Cauliflower mosaic virus (CaMV) 35S promoter (P35S) is a commonly used target for detection of genetically modified organisms (GMOs).
T3 265-365 Sentence denotes There are currently 24 reported detection methods, targeting different regions of the P35S promoter.
T4 366-600 Sentence denotes Initial assessment revealed that due to the absence of primer binding sites in the P35S sequence, 19 of the 24 reported methods failed to detect P35S in MON88913 cotton, and the other two methods could only be applied to certain GMOs.
T5 601-832 Sentence denotes The rest three reported methods were not suitable for measurement of P35S in some testing events, because SNPs in binding sites of the primer/probe would result in abnormal amplification plots and poor linear regression parameters.
T6 833-1069 Sentence denotes In this study, we discovered a conserved region in the P35S sequence through sequencing of P35S promoters from multiple transgenic events, and developed new qualitative and quantitative detection systems targeting this conserved region.
T7 1070-1183 Sentence denotes The qualitative PCR could detect the P35S promoter in 23 unique GMO events with high specificity and sensitivity.
T8 1184-1349 Sentence denotes The quantitative method was suitable for measurement of P35S promoter, exhibiting good agreement between the amount of template and Ct values for each testing event.
T9 1350-1447 Sentence denotes This study provides a general P35S screening method, with greater coverage than existing methods.

Oryza_sentences

Id Subject Object Predicate Lexical cue
T1 0-126 Sentence denotes Development of a general method for detection and quantification of the P35S promoter based on assessment of existing methods.
T2 127-264 Sentence denotes The Cauliflower mosaic virus (CaMV) 35S promoter (P35S) is a commonly used target for detection of genetically modified organisms (GMOs).
T3 265-365 Sentence denotes There are currently 24 reported detection methods, targeting different regions of the P35S promoter.
T4 366-600 Sentence denotes Initial assessment revealed that due to the absence of primer binding sites in the P35S sequence, 19 of the 24 reported methods failed to detect P35S in MON88913 cotton, and the other two methods could only be applied to certain GMOs.
T5 601-832 Sentence denotes The rest three reported methods were not suitable for measurement of P35S in some testing events, because SNPs in binding sites of the primer/probe would result in abnormal amplification plots and poor linear regression parameters.
T6 833-1069 Sentence denotes In this study, we discovered a conserved region in the P35S sequence through sequencing of P35S promoters from multiple transgenic events, and developed new qualitative and quantitative detection systems targeting this conserved region.
T7 1070-1183 Sentence denotes The qualitative PCR could detect the P35S promoter in 23 unique GMO events with high specificity and sensitivity.
T8 1184-1349 Sentence denotes The quantitative method was suitable for measurement of P35S promoter, exhibiting good agreement between the amount of template and Ct values for each testing event.
T9 1350-1447 Sentence denotes This study provides a general P35S screening method, with greater coverage than existing methods.

NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T1 131-155 OrganismTaxon denotes Cauliflower mosaic virus 10641
T2 157-161 OrganismTaxon denotes CaMV 10641

Anatomy-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 247-256 Body_part denotes organisms http://purl.obolibrary.org/obo/UBERON_0000468