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OryzaGP_2021

Id Subject Object Predicate Lexical cue
T1 30-34 http://identifiers.org/oryzabase.gene/451 denotes salt
T2 30-34 http://identifiers.org/oryzabase.gene/21170 denotes salt
T3 237-241 http://identifiers.org/oryzabase.gene/451 denotes salt
T4 237-241 http://identifiers.org/oryzabase.gene/21170 denotes salt
T5 409-411 http://identifiers.org/oryzabase.gene/21590 denotes MS
T6 670-672 http://identifiers.org/oryzabase.gene/456 denotes TI
T7 678-700 http://identifiers.org/oryzabase.gene/6418 denotes relative water content
T8 678-700 http://identifiers.org/oryzabase.gene/6417 denotes relative water content
T9 702-705 http://identifiers.org/oryzabase.gene/6418 denotes RWC
T10 823-825 http://identifiers.org/oryzabase.gene/456 denotes TI
T11 838-841 http://identifiers.org/oryzabase.gene/6418 denotes RWC
T12 1415-1419 http://identifiers.org/oryzabase.gene/451 denotes salt
T13 1415-1419 http://identifiers.org/oryzabase.gene/21170 denotes salt
T76635 30-34 http://identifiers.org/ricegap/LOC_Os11g07450 denotes salt
T58296 30-34 http://identifiers.org/ricegap/LOC_Os01g24710 denotes salt
T9842 237-241 http://identifiers.org/ricegap/LOC_Os11g07450 denotes salt
T40065 237-241 http://identifiers.org/ricegap/LOC_Os01g24710 denotes salt
T53953 409-411 http://identifiers.org/ricegap/LOC_Os04g40990 denotes MS
T82511 670-672 http://identifiers.org/ricegap/LOC_Os01g05490 denotes TI
T276 823-825 http://identifiers.org/ricegap/LOC_Os01g05490 denotes TI
T71434 1415-1419 http://identifiers.org/ricegap/LOC_Os11g07450 denotes salt
T37387 1415-1419 http://identifiers.org/ricegap/LOC_Os01g24710 denotes salt
T54000 30-34 http://identifiers.org/rapdb.locus/Os11g0175500 denotes salt
T98763 30-34 http://identifiers.org/rapdb.locus/Os01g0348900 denotes salt
T36054 237-241 http://identifiers.org/rapdb.locus/Os11g0175500 denotes salt
T99548 237-241 http://identifiers.org/rapdb.locus/Os01g0348900 denotes salt
T68213 409-411 http://identifiers.org/rapdb.locus/Os04g0486950 denotes MS
T88461 670-672 http://identifiers.org/rapdb.locus/Os01g0147900 denotes TI
T14128 823-825 http://identifiers.org/rapdb.locus/Os01g0147900 denotes TI
T61156 1415-1419 http://identifiers.org/rapdb.locus/Os11g0175500 denotes salt
T80242 1415-1419 http://identifiers.org/rapdb.locus/Os01g0348900 denotes salt
T97859 30-34 http://identifiers.org/uniprot/Q53PH3 denotes salt
T78133 30-34 http://identifiers.org/uniprot/B9G9N6 denotes salt
T12535 237-241 http://identifiers.org/uniprot/Q53PH3 denotes salt
T83907 237-241 http://identifiers.org/uniprot/B9G9N6 denotes salt
T48037 409-411 http://identifiers.org/uniprot/A2XUV1 denotes MS
T61869 670-672 http://identifiers.org/uniprot/P48494 denotes TI
T82447 823-825 http://identifiers.org/uniprot/P48494 denotes TI
T81824 1415-1419 http://identifiers.org/uniprot/Q53PH3 denotes salt
T51503 1415-1419 http://identifiers.org/uniprot/B9G9N6 denotes salt
M_0 462-465 hunflair:NA:Chemical denotes Kin
M_1 509-513 hunflair:NA:Chemical denotes NaCl
M_2 868-872 hunflair:NA:Chemical denotes NaCl
M_3 1321-1325 hunflair:NA:Chemical denotes NaCl
M_4 1519-1523 hunflair:NA:Chemical denotes NaCl
M_5 84-96 hunflair:NA:Species denotes Oryza sativa
M_6 78-82 hunflair:NA:Species denotes rice
M_7 271-275 hunflair:NA:Species denotes rice

pqqtest_sentence

Id Subject Object Predicate Lexical cue
M_0 84-96 xzyao:1553 denotes Oryza sativa
M_1 687-700 xzyao:19951 denotes water content
M_2 874-892 xzyao:38593 denotes Plant regeneration
M_3 1550-1568 xzyao:38593 denotes plant regeneration
M_4 219-235 xzyao:10867 denotes abiotic stresses
M_5 30-41 funRiceGene:517, xzyao:21986 denotes salt stress
M_6 1024-1038 xzyao:10361 denotes maximum number
M_7 634-640 WTO:0000021, funRiceGene:221 denotes growth
M_8 30-34 funRiceGene:528 denotes salt
M_9 237-241 funRiceGene:528 denotes salt
M_10 1415-1419 funRiceGene:528 denotes salt
M_11 35-41 funRiceGene:361 denotes stress
M_12 1342-1348 funRiceGene:361 denotes stress
M_13 634-645 funRiceGene:106, xzyao:18538 denotes growth rate
M_14 117-133 TO:0000428 denotes callus induction
M_15 351-367 TO:0000428 denotes callus induction
M_16 678-700 xzyao:14561 denotes relative water content
M_17 653-662 funRiceGene:214 denotes tolerance
M_18 784-793 funRiceGene:214 denotes tolerance
M_19 117-123 funRiceGene:113 denotes callus
M_20 351-357 funRiceGene:113 denotes callus
M_21 625-645 TO:0000515, xzyao:31357 denotes relative growth rate
M_22 1334-1348 WTO:0000062, funRiceGene:360, xzyao:24849 denotes abiotic stress
M_23 509-513 hunflair:NA:Chemical denotes NaCl
M_24 868-872 hunflair:NA:Chemical denotes NaCl
M_25 1321-1325 hunflair:NA:Chemical denotes NaCl
M_26 1519-1523 hunflair:NA:Chemical denotes NaCl
M_27 78-82 hunflair:NA:Species denotes rice
M_28 271-275 hunflair:NA:Species denotes rice
M_29 462-465 hunflair:NA:Chemical denotes Kin
M_30 84-96 hunflair:NA:Species denotes Oryza sativa
M_31 509-513 pubtator:MESH:D012965:Chemical denotes NaCl
M_32 868-872 pubtator:MESH:D012965:Chemical denotes NaCl
M_33 1321-1325 pubtator:MESH:D012965:Chemical denotes NaCl
M_34 1519-1523 pubtator:MESH:D012965:Chemical denotes NaCl
M_35 78-82 pubtator:4530:Species denotes rice
M_36 271-275 pubtator:4530:Species denotes rice
M_37 84-98 pubtator:4530:Species denotes Oryza sativa L

21k_plant_trait_mention

Id Subject Object Predicate Lexical cue
M_0 653-662 funRiceGene:214 denotes tolerance
M_1 784-793 funRiceGene:214 denotes tolerance
M_2 634-645 funRiceGene:106, xzyao:5698 denotes growth rate
M_3 1415-1419 funRiceGene:528 denotes salt
M_4 678-700 xzyao:3071 denotes relative water content
M_5 634-640 WTO:0000021, funRiceGene:221 denotes growth
M_6 117-133 TO:0000428, xzyao:233 denotes callus induction
M_7 351-367 TO:0000428, xzyao:233 denotes callus induction
M_8 625-645 TO:0000515, xzyao:5326 denotes relative growth rate
M_9 117-123 funRiceGene:113 denotes callus
M_10 351-357 funRiceGene:113 denotes callus
M_11 78-82 hunflair:NA:Species denotes rice
M_12 271-275 hunflair:NA:Species denotes rice
M_13 462-465 hunflair:NA:Chemical denotes Kin
M_14 84-96 hunflair:NA:Species denotes Oryza sativa
M_15 509-513 hunflair:NA:Chemical denotes NaCl
M_16 868-872 hunflair:NA:Chemical denotes NaCl
M_17 1321-1325 hunflair:NA:Chemical denotes NaCl
M_18 1519-1523 hunflair:NA:Chemical denotes NaCl
M_19 509-513 pubtator:MESH:D012965:Chemical denotes NaCl
M_20 868-872 pubtator:MESH:D012965:Chemical denotes NaCl
M_21 1321-1325 pubtator:MESH:D012965:Chemical denotes NaCl
M_22 1519-1523 pubtator:MESH:D012965:Chemical denotes NaCl
M_23 78-82 pubtator:4530:Species denotes rice
M_24 271-275 pubtator:4530:Species denotes rice
M_25 84-98 pubtator:4530:Species denotes Oryza sativa L

OryzaGP_2021_v2

Id Subject Object Predicate Lexical cue
T1 409-411 http://identifiers.org/oryzabase.gene/21590 denotes MS
T2 670-672 http://identifiers.org/oryzabase.gene/456 denotes TI
T3 823-825 http://identifiers.org/oryzabase.gene/456 denotes TI
T65218 409-411 http://identifiers.org/rapdb.locus/Os04g0486950 denotes MS
T30951 670-672 http://identifiers.org/rapdb.locus/Os01g0147900 denotes TI
T58136 823-825 http://identifiers.org/rapdb.locus/Os01g0147900 denotes TI

OryzaGP_2022

Id Subject Object Predicate Lexical cue
T1 454-455 http://identifiers.org/oryzabase.gene/11216 denotes 1
T2 476-477 http://identifiers.org/oryzabase.gene/11216 denotes 1
T3 542-543 http://identifiers.org/oryzabase.gene/11216 denotes 1
T4 678-700 http://identifiers.org/oryzabase.gene/6418 denotes relative water content
T5 678-700 http://identifiers.org/oryzabase.gene/6417 denotes relative water content
T6 865-866 http://identifiers.org/oryzabase.gene/11216 denotes 1
T7 1412-1413 http://identifiers.org/oryzabase.gene/11216 denotes 1

OryzaGP_2021_FLAIR

Id Subject Object Predicate Lexical cue
M_0 462-465 hunflair:NA:Chemical denotes Kin
M_1 509-513 hunflair:NA:Chemical denotes NaCl
M_2 868-872 hunflair:NA:Chemical denotes NaCl
M_3 1321-1325 hunflair:NA:Chemical denotes NaCl
M_4 1519-1523 hunflair:NA:Chemical denotes NaCl
M_5 84-96 hunflair:NA:Species denotes Oryza sativa
M_6 78-82 hunflair:NA:Species denotes rice
M_7 271-275 hunflair:NA:Species denotes rice

funRiceGenes-all

Id Subject Object Predicate Lexical cue
PTO-all_T1 117-133 http://purl.obolibrary.org/obo/TO_0000428 denotes callus induction
PTO-all_T2 351-367 http://purl.obolibrary.org/obo/TO_0000428 denotes callus induction
PTO-all_T3 409-411 http://purl.obolibrary.org/obo/TO_0000106 denotes MS
PTO-all_T4 625-645 http://purl.obolibrary.org/obo/TO_0000515 denotes relative growth rate
PTO-all_T5 670-672 http://purl.obolibrary.org/obo/TO_0000329 denotes TI
PTO-all_T6 823-825 http://purl.obolibrary.org/obo/TO_0000329 denotes TI

funRiceGenes-exact

Id Subject Object Predicate Lexical cue
PTO-exact_T1 117-133 http://purl.obolibrary.org/obo/TO_0000428 denotes callus induction
PTO-exact_T2 351-367 http://purl.obolibrary.org/obo/TO_0000428 denotes callus induction
PTO-exact_T3 625-645 http://purl.obolibrary.org/obo/TO_0000515 denotes relative growth rate

OryzaGP

Id Subject Object Predicate Lexical cue
T1 678-700 gene denotes relative water content

Oryza_sentences

Id Subject Object Predicate Lexical cue
T1 0-101 Sentence denotes Effect of air desiccation and salt stress factors on in vitro regeneration of rice (Oryza sativa L.).
T2 102-290 Sentence denotes Enhancement of callus induction and its regeneration efficiency through in vitro techniques has been optimized for 2 abiotic stresses (salt and air desiccation) using 3 rice genotypes viz.
T3 291-325 Sentence denotes BR10, BRRI dhan32 and BRRI dhan47.
T4 326-480 Sentence denotes The highest frequency of callus induction was obtained for BRRI dhan32 (64.44%) in MS medium supplemented with 2, 4-D (2.5 mgL(-1)) and Kin (1.0 mgL(-1)).
T5 481-707 Sentence denotes Different concentrations of NaCl (2.9, 5.9, 8.8 and 11.7 gL(-1)) were used and its effect was recorded on the basis of viability of calli (VC), relative growth rate (RGR), tolerance index (TI) and relative water content (RWC).
T6 708-873 Sentence denotes It was observed that in all cases BRRI dhan47 showed highest performance on tolerance to VC (45.33%), RGR (1.03%), TI (0.20%) and RWC (10.23%) with 11.7 gL(-1) NaCl.
T7 874-993 Sentence denotes Plant regeneration capability was recorded after partial air desiccation pretreatment to calli for 15, 30, 45 and 60 h.
T8 994-1112 Sentence denotes In this case BRRI dhan32 gave maximum number of regeneration (76.19%) when 4 weeks old calli were desiccated for 45 h.
T9 1113-1242 Sentence denotes It was observed that air desiccation was 2-3 folds more effective for enhancing green plantlet regeneration compared to controls.
T10 1243-1442 Sentence denotes Furthermore, desiccated calli also showed the better capability to survive in NaCl induced abiotic stress; and gave 1.9 fold (88.80%) increased regeneration in 11.7 gL(-1) salt level for BRRI dhan47.
T11 1443-1581 Sentence denotes Analysis of variance (ANOVA) showed that the genotypes, air desiccation and NaCl had significant effect on plant regeneration at P < 0.01.