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PubMed:25399020 JSONTXT

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OryzaGP_2021

Id Subject Object Predicate Lexical cue
T1 27-70 http://identifiers.org/oryzabase.gene/21609 denotes UDP-N-acetylglucosamine pyrophosphorylase 1
T2 72-76 http://identifiers.org/oryzabase.gene/21609 denotes UAP1
T3 92-107 http://identifiers.org/oryzabase.gene/6151 denotes leaf senescence
T4 145-160 http://identifiers.org/oryzabase.gene/6151 denotes leaf senescence
T5 323-338 http://identifiers.org/oryzabase.gene/21609 denotes spotted leaf 29
T6 340-345 http://identifiers.org/oryzabase.gene/21609 denotes spl29
T7 352-357 http://identifiers.org/oryzabase.gene/21609 denotes SPL29
T8 381-384 http://identifiers.org/oryzabase.gene/12401 denotes map
T9 404-409 http://identifiers.org/oryzabase.gene/21609 denotes SPL29
T10 427-470 http://identifiers.org/oryzabase.gene/21609 denotes UDP-N-acetylglucosamine pyrophosphorylase 1
T11 472-476 http://identifiers.org/oryzabase.gene/21609 denotes UAP1
T12 512-517 http://identifiers.org/oryzabase.gene/21609 denotes spl29
T13 642-647 http://identifiers.org/oryzabase.gene/21609 denotes spl29
T14 671-686 http://identifiers.org/oryzabase.gene/6151 denotes leaf senescence
T15 774-785 http://identifiers.org/oryzabase.gene/757 denotes chloroplast
T16 774-785 http://identifiers.org/oryzabase.gene/7333 denotes chloroplast
T17 774-785 http://identifiers.org/oryzabase.gene/730 denotes chloroplast
T18 774-785 http://identifiers.org/oryzabase.gene/6056 denotes chloroplast
T19 1032-1037 http://identifiers.org/oryzabase.gene/21609 denotes spl29
T20 1218-1223 http://identifiers.org/oryzabase.gene/21609 denotes spl29
T21 1291-1311 http://identifiers.org/oryzabase.gene/540 denotes superoxide dismutase
T22 1291-1311 http://identifiers.org/oryzabase.gene/20934 denotes superoxide dismutase
T23 1363-1368 http://identifiers.org/oryzabase.gene/21609 denotes spl29
T24 1450-1463 http://identifiers.org/oryzabase.gene/8408 denotes abscisic acid
T25 1484-1489 http://identifiers.org/oryzabase.gene/21609 denotes spl29
T26 1560-1575 http://identifiers.org/oryzabase.gene/6151 denotes leaf senescence
T27 1605-1610 http://identifiers.org/oryzabase.gene/21609 denotes spl29
T28 1665-1669 http://identifiers.org/oryzabase.gene/21609 denotes UAP1
T29 1696-1711 http://identifiers.org/oryzabase.gene/6151 denotes leaf senescence
T36384 27-70 http://identifiers.org/ricegap/LOC_Os08g10600 denotes UDP-N-acetylglucosamine pyrophosphorylase 1
T79229 72-76 http://identifiers.org/ricegap/LOC_Os08g10600 denotes UAP1
T39701 323-338 http://identifiers.org/ricegap/LOC_Os08g10600 denotes spotted leaf 29
T56747 340-345 http://identifiers.org/ricegap/LOC_Os08g10600 denotes spl29
T35890 352-357 http://identifiers.org/ricegap/LOC_Os08g10600 denotes SPL29
T3342 381-384 http://identifiers.org/ricegap/LOC_Os08g40620 denotes map
T87637 404-409 http://identifiers.org/ricegap/LOC_Os08g10600 denotes SPL29
T87547 427-470 http://identifiers.org/ricegap/LOC_Os08g10600 denotes UDP-N-acetylglucosamine pyrophosphorylase 1
T5286 472-476 http://identifiers.org/ricegap/LOC_Os08g10600 denotes UAP1
T65018 512-517 http://identifiers.org/ricegap/LOC_Os08g10600 denotes spl29
T32673 642-647 http://identifiers.org/ricegap/LOC_Os08g10600 denotes spl29
T82674 774-785 http://identifiers.org/ricegap/LOC_Os09g17740 denotes chloroplast
T57283 774-785 http://identifiers.org/ricegap/LOC_Os06g51084 denotes chloroplast
T97879 774-785 http://identifiers.org/ricegap/LOC_Os06g12450 denotes chloroplast
T76045 774-785 http://identifiers.org/ricegap/LOC_Os04g56400 denotes chloroplast
T86889 1032-1037 http://identifiers.org/ricegap/LOC_Os08g10600 denotes spl29
T16077 1218-1223 http://identifiers.org/ricegap/LOC_Os08g10600 denotes spl29
T22886 1291-1311 http://identifiers.org/ricegap/LOC_Os04g48410 denotes superoxide dismutase
T53507 1363-1368 http://identifiers.org/ricegap/LOC_Os08g10600 denotes spl29
T87207 1450-1463 http://identifiers.org/ricegap/LOC_Os11g06720 denotes abscisic acid
T55937 1484-1489 http://identifiers.org/ricegap/LOC_Os08g10600 denotes spl29
T16081 1605-1610 http://identifiers.org/ricegap/LOC_Os08g10600 denotes spl29
T82004 1665-1669 http://identifiers.org/ricegap/LOC_Os08g10600 denotes UAP1
T38952 27-70 http://identifiers.org/rapdb.locus/Os08g0206900 denotes UDP-N-acetylglucosamine pyrophosphorylase 1
T25173 72-76 http://identifiers.org/rapdb.locus/Os08g0206900 denotes UAP1
T8811 323-338 http://identifiers.org/rapdb.locus/Os08g0206900 denotes spotted leaf 29
T39524 340-345 http://identifiers.org/rapdb.locus/Os08g0206900 denotes spl29
T55502 352-357 http://identifiers.org/rapdb.locus/Os08g0206900 denotes SPL29
T54654 381-384 http://identifiers.org/rapdb.locus/Os08g0518100 denotes map
T61023 404-409 http://identifiers.org/rapdb.locus/Os08g0206900 denotes SPL29
T78272 427-470 http://identifiers.org/rapdb.locus/Os08g0206900 denotes UDP-N-acetylglucosamine pyrophosphorylase 1
T92773 472-476 http://identifiers.org/rapdb.locus/Os08g0206900 denotes UAP1
T39131 512-517 http://identifiers.org/rapdb.locus/Os08g0206900 denotes spl29
T4845 642-647 http://identifiers.org/rapdb.locus/Os08g0206900 denotes spl29
T38841 774-785 http://identifiers.org/rapdb.locus/Os09g0346500 denotes chloroplast
T3132 774-785 http://identifiers.org/rapdb.locus/Os06g0726400 denotes chloroplast
T63586 774-785 http://identifiers.org/rapdb.locus/Os06g0229800 denotes chloroplast
T35993 774-785 http://identifiers.org/rapdb.locus/Os04g0659100 denotes chloroplast
T50974 1032-1037 http://identifiers.org/rapdb.locus/Os08g0206900 denotes spl29
T54506 1218-1223 http://identifiers.org/rapdb.locus/Os08g0206900 denotes spl29
T84819 1291-1311 http://identifiers.org/rapdb.locus/Os04g0573200 denotes superoxide dismutase
T94734 1363-1368 http://identifiers.org/rapdb.locus/Os08g0206900 denotes spl29
T14963 1450-1463 http://identifiers.org/rapdb.locus/Os11g0167800 denotes abscisic acid
T33057 1484-1489 http://identifiers.org/rapdb.locus/Os08g0206900 denotes spl29
T40418 1605-1610 http://identifiers.org/rapdb.locus/Os08g0206900 denotes spl29
T25311 1665-1669 http://identifiers.org/rapdb.locus/Os08g0206900 denotes UAP1
T75565 27-70 http://identifiers.org/uniprot/Q6ZJ97 denotes UDP-N-acetylglucosamine pyrophosphorylase 1
T9495 72-76 http://identifiers.org/uniprot/Q6ZJ97 denotes UAP1
T68974 323-338 http://identifiers.org/uniprot/Q6ZJ97 denotes spotted leaf 29
T64127 340-345 http://identifiers.org/uniprot/Q6ZJ97 denotes spl29
T97495 352-357 http://identifiers.org/uniprot/Q6ZJ97 denotes SPL29
T21505 404-409 http://identifiers.org/uniprot/Q6ZJ97 denotes SPL29
T90191 427-470 http://identifiers.org/uniprot/Q6ZJ97 denotes UDP-N-acetylglucosamine pyrophosphorylase 1
T5476 472-476 http://identifiers.org/uniprot/Q6ZJ97 denotes UAP1
T64189 512-517 http://identifiers.org/uniprot/Q6ZJ97 denotes spl29
T11996 642-647 http://identifiers.org/uniprot/Q6ZJ97 denotes spl29
T35322 774-785 http://identifiers.org/uniprot/Q0DDE3 denotes chloroplast
T12598 774-785 http://identifiers.org/uniprot/Q01HZ7 denotes chloroplast
T51549 774-785 http://identifiers.org/uniprot/Q01401 denotes chloroplast
T17355 774-785 http://identifiers.org/uniprot/P14655-2 denotes chloroplast
T6675 774-785 http://identifiers.org/uniprot/P14655 denotes chloroplast
T40087 774-785 http://identifiers.org/uniprot/P12330 denotes chloroplast
T77851 774-785 http://identifiers.org/uniprot/D0TZI4 denotes chloroplast
T19161 774-785 http://identifiers.org/uniprot/A3BFK2 denotes chloroplast
T58631 1032-1037 http://identifiers.org/uniprot/Q6ZJ97 denotes spl29
T20633 1218-1223 http://identifiers.org/uniprot/Q6ZJ97 denotes spl29
T60183 1291-1311 http://identifiers.org/uniprot/Q7XTY9 denotes superoxide dismutase
T84476 1291-1311 http://identifiers.org/uniprot/Q01JW6 denotes superoxide dismutase
T9931 1363-1368 http://identifiers.org/uniprot/Q6ZJ97 denotes spl29
T52330 1450-1463 http://identifiers.org/uniprot/Q53JF7 denotes abscisic acid
T14764 1484-1489 http://identifiers.org/uniprot/Q6ZJ97 denotes spl29
T38901 1605-1610 http://identifiers.org/uniprot/Q6ZJ97 denotes spl29
T40727 1665-1669 http://identifiers.org/uniprot/Q6ZJ97 denotes UAP1
M_0 1450-1463 hunflair:NA:Chemical denotes abscisic acid
M_1 1291-1311 hunflair:NA:Gene denotes superoxide dismutase
M_2 323-338 hunflair:NA:Gene denotes spotted leaf 29
M_3 133-137 hunflair:NA:Species denotes rice
M_4 310-314 hunflair:NA:Species denotes rice
M_5 1737-1741 hunflair:NA:Species denotes rice
M_6 340-345 hunflair:NA:Gene denotes spl29
M_7 512-517 hunflair:NA:Gene denotes spl29
M_8 642-647 hunflair:NA:Gene denotes spl29
M_9 1032-1037 hunflair:NA:Gene denotes spl29
M_10 1218-1223 hunflair:NA:Gene denotes spl29
M_11 1363-1368 hunflair:NA:Gene denotes spl29
M_12 1484-1489 hunflair:NA:Gene denotes spl29
M_13 1605-1610 hunflair:NA:Gene denotes spl29
M_14 352-357 hunflair:NA:Gene denotes SPL29
M_15 404-409 hunflair:NA:Gene denotes SPL29
M_16 524-527 hunflair:NA:Gene denotes UAP
M_17 574-577 hunflair:NA:Gene denotes UAP
M_18 27-30 hunflair:NA:Chemical denotes UDP
M_19 427-430 hunflair:NA:Chemical denotes UDP
M_20 1257-1272 hunflair:NA:Chemical denotes malondialdehyde
M_21 1432-1445 hunflair:NA:Chemical denotes jasmonic acid
M_22 701-712 hunflair:NA:Chemical denotes chlorophyll
M_23 774-785 hunflair:NA:Gene denotes chloroplast
M_24 1160-1166 hunflair:NA:Chemical denotes oxygen
M_25 1291-1301 hunflair:NA:Chemical denotes superoxide
M_26 72-76 hunflair:NA:Gene denotes UAP1
M_27 472-476 hunflair:NA:Gene denotes UAP1
M_28 1665-1669 hunflair:NA:Gene denotes UAP1
M_29 1342-1350 hunflair:NA:Gene denotes catalase
M_30 31-50 hunflair:NA:Chemical denotes N-acetylglucosamine
M_31 431-450 hunflair:NA:Chemical denotes N-acetylglucosamine
M_32 1197-1201 hunflair:NA:Chemical denotes H2O2
M_33 1394-1398 hunflair:NA:Chemical denotes H2O2
M_34 1218-1230 hunflair:NA:Species denotes spl29 plants
M_35 1484-1496 hunflair:NA:Species denotes spl29 plants
M_36 27-70 hunflair:NA:Gene denotes UDP-N-acetylglucosamine pyrophosphorylase 1
M_37 427-470 hunflair:NA:Gene denotes UDP-N-acetylglucosamine pyrophosphorylase 1
M_38 722-736 hunflair:NA:Gene denotes photosystem II

pqqtest_sentence

Id Subject Object Predicate Lexical cue
M_0 994-1011 cand:funRiceGene:136-defense response denotes Defence responses
M_1 994-1011 cand:funRiceGene:232-defence response denotes Defence responses
M_2 994-1011 cand:WTO:0000279-Army Cutworm denotes Defence responses
M_3 994-1011 cand:funRiceGene:185-immune response denotes Defence responses
M_4 994-1011 cand:funRiceGene:154-stress response denotes Defence responses
M_5 994-1011 cand:funRiceGene:47-wounding response denotes Defence responses
M_6 994-1011 cand:funRiceGene:108-ethylene response denotes Defence responses
M_7 1716-1733 cand:funRiceGene:136-defense response denotes defence responses
M_8 1716-1733 cand:funRiceGene:232-defence response denotes defence responses
M_9 1716-1733 cand:funRiceGene:40-innate immunity denotes defence responses
M_10 1716-1733 cand:funRiceGene:185-immune response denotes defence responses
M_11 1716-1733 cand:funRiceGene:310-immunity signalling denotes defence responses
M_12 1716-1733 cand:funRiceGene:290-plant defense signaling denotes defence responses
M_13 1716-1733 cand:funRiceGene:108-ethylene response denotes defence responses
M_14 1716-1733 cand:funRiceGene:43-stress response denotes defence responses
M_15 542-563 cand:TO:0000239-plant genetic trait unknown denotes biological phenotypes
M_16 542-563 cand:TO:0002755-cell organelle development trait denotes biological phenotypes
M_17 542-563 cand:TO:0000341-plant genetic trait denotes biological phenotypes
M_18 542-563 cand:PECO:0007380-cytoplasmic genetic background denotes biological phenotypes
M_19 542-563 cand:TO:0000277-biochemical trait denotes biological phenotypes
M_20 542-563 cand:TO:0002683-plant cell morphology trait denotes biological phenotypes
M_21 542-563 cand:PO:0006017-helobial endosperm denotes biological phenotypes
M_22 542-563 cand:TO:0000283-biological process trait denotes biological phenotypes
M_23 542-563 cand:funRiceGene:112-Holliday junctions denotes biological phenotypes
M_24 542-563 cand:WTO:0000005-phenotype denotes biological phenotypes
M_25 542-563 cand:TO:0000857-lodicule type denotes biological phenotypes
M_26 1032-1037 GeneID:RAPID:Os08g0206900MSUID:LOC_Os08g10600 denotes spl29
M_27 1665-1669 GeneID:RAPID:Os08g0206900MSUID:LOC_Os08g10600 denotes UAP1
M_28 574-577 GeneID:NA denotes UAP
T99948 1088-1094 funRiceGene:210 denotes blight
T76290 112-129 xzyao:14962 denotes defence responses
T47940 165-182 xzyao:14962 denotes defence responses
T92549 994-1011 xzyao:14962 denotes Defence responses
T11979 1580-1597 xzyao:14962 denotes defence responses
T49840 1716-1733 xzyao:14962 denotes defence responses
T661 864-885 xzyao:35061 denotes transcription factors
T63325 941-955 funRiceGene:235 denotes photosynthesis
T24530 1151-1174 funRiceGene:348, xzyao:30433 denotes Reactive oxygen species
T55716 1064-1074 funRiceGene:228 denotes resistance
T35980 197-217 xzyao:24351 denotes biological processes
T59291 701-717 xzyao:38667 denotes chlorophyll loss
T10461 381-398 funRiceGene:79, xzyao:10375 denotes map-based cloning
T45495 524-536 xzyao:7231 denotes UAP activity
T4755 112-119 funRiceGene:445 denotes defence
T54323 165-172 funRiceGene:445 denotes defence
T52899 994-1001 funRiceGene:445 denotes Defence
T37687 1127-1134 funRiceGene:445 denotes defence
T35391 1580-1587 funRiceGene:445 denotes defence
T43042 1716-1723 funRiceGene:445 denotes defence
T62570 97-107 funRiceGene:58 denotes senescence
T13935 150-160 funRiceGene:58 denotes senescence
T25467 676-686 funRiceGene:58 denotes senescence
T71547 853-863 funRiceGene:58 denotes senescence
T15813 890-900 funRiceGene:58 denotes senescence
T52719 1565-1575 funRiceGene:58 denotes senescence
T94043 1701-1711 funRiceGene:58 denotes senescence
T51357 51-68 funRiceGene:343 denotes pyrophosphorylase
T90323 451-468 funRiceGene:343 denotes pyrophosphorylase
M_29 1432-1445 funRiceGene:387, xzyao:25357 denotes jasmonic acid
M_30 323-335 xzyao:8507 denotes spotted leaf
M_31 722-733 funRiceGene:275 denotes photosystem
M_32 1127-1143 funRiceGene:426, xzyao:40974 denotes defence response
M_33 92-107 funRiceGene:463, xzyao:5640 denotes leaf senescence
M_34 145-160 funRiceGene:463, xzyao:5640 denotes leaf senescence
M_35 671-686 funRiceGene:463, xzyao:5640 denotes leaf senescence
M_36 1560-1575 funRiceGene:463, xzyao:5640 denotes leaf senescence
M_37 1696-1711 funRiceGene:463, xzyao:5640 denotes leaf senescence
M_38 86-107 WTO:0000133, funRiceGene:521, xzyao:4041 denotes early leaf senescence
M_39 665-686 WTO:0000133, funRiceGene:521, xzyao:4041 denotes early leaf senescence
M_40 1554-1575 WTO:0000133, funRiceGene:521, xzyao:4041 denotes early leaf senescence
M_41 92-96 PO:0025034, funRiceGene:469 denotes leaf
M_42 145-149 PO:0025034, funRiceGene:469 denotes leaf
M_43 331-335 PO:0025034, funRiceGene:469 denotes leaf
M_44 671-675 PO:0025034, funRiceGene:469 denotes leaf
M_45 1560-1564 PO:0025034, funRiceGene:469 denotes leaf
M_46 1696-1700 PO:0025034, funRiceGene:469 denotes leaf
M_47 1450-1463 funRiceGene:339, xzyao:16388 denotes abscisic acid
M_48 1151-1166 xzyao:38879 denotes Reactive oxygen
M_49 774-785 funRiceGene:447 denotes chloroplast
M_50 1078-1094 funRiceGene:3, xzyao:42537 denotes bacterial blight
M_51 1257-1280 xzyao:19179 denotes malondialdehyde content
M_52 1417-1431 xzyao:33520 denotes plant hormones
M_53 1506-1520 xzyao:33520 denotes plant hormones
M_54 1432-1440 funRiceGene:9 denotes jasmonic
M_55 774-797 xzyao:3216 denotes chloroplast degradation
M_56 1257-1272 hunflair:NA:Chemical denotes malondialdehyde
M_57 27-70 hunflair:NA:Gene denotes UDP-N-acetylglucosamine pyrophosphorylase 1
M_58 427-470 hunflair:NA:Gene denotes UDP-N-acetylglucosamine pyrophosphorylase 1
M_59 323-338 hunflair:NA:Gene denotes spotted leaf 29
M_60 1450-1463 hunflair:NA:Chemical denotes abscisic acid
M_61 722-736 hunflair:NA:Gene denotes photosystem II
M_62 1291-1311 hunflair:NA:Gene denotes superoxide dismutase
M_63 1160-1166 hunflair:NA:Chemical denotes oxygen
M_64 1291-1301 hunflair:NA:Chemical denotes superoxide
M_65 701-712 hunflair:NA:Chemical denotes chlorophyll
M_66 1342-1350 hunflair:NA:Gene denotes catalase
M_67 27-30 hunflair:NA:Chemical denotes UDP
M_68 427-430 hunflair:NA:Chemical denotes UDP
M_69 340-345 hunflair:NA:Gene denotes spl29
M_70 512-517 hunflair:NA:Gene denotes spl29
M_71 642-647 hunflair:NA:Gene denotes spl29
M_72 1032-1037 hunflair:NA:Gene denotes spl29
M_73 1218-1223 hunflair:NA:Gene denotes spl29
M_74 1363-1368 hunflair:NA:Gene denotes spl29
M_75 1484-1489 hunflair:NA:Gene denotes spl29
M_76 1605-1610 hunflair:NA:Gene denotes spl29
M_77 774-785 hunflair:NA:Gene denotes chloroplast
M_78 1197-1201 hunflair:NA:Chemical denotes H2O2
M_79 1394-1398 hunflair:NA:Chemical denotes H2O2
M_80 31-50 hunflair:NA:Chemical denotes N-acetylglucosamine
M_81 431-450 hunflair:NA:Chemical denotes N-acetylglucosamine
M_82 72-76 hunflair:NA:Gene denotes UAP1
M_83 472-476 hunflair:NA:Gene denotes UAP1
M_84 1665-1669 hunflair:NA:Gene denotes UAP1
M_85 352-357 hunflair:NA:Gene denotes SPL29
M_86 404-409 hunflair:NA:Gene denotes SPL29
M_87 524-527 hunflair:NA:Gene denotes UAP
M_88 574-577 hunflair:NA:Gene denotes UAP
M_89 1432-1445 hunflair:NA:Chemical denotes jasmonic acid
M_90 133-137 hunflair:NA:Species denotes rice
M_91 310-314 hunflair:NA:Species denotes rice
M_92 1737-1741 hunflair:NA:Species denotes rice
M_93 1218-1230 hunflair:NA:Species denotes spl29 plants
M_94 1484-1496 hunflair:NA:Species denotes spl29 plants
M_95 1450-1463 pubtator:MESH:D000040:Chemical denotes abscisic acid
M_96 27-50 pubtator:MESH:D014537:Chemical denotes UDP-N-acetylglucosamine
M_97 427-450 pubtator:MESH:D014537:Chemical denotes UDP-N-acetylglucosamine
M_98 1160-1166 pubtator:MESH:D010100:Chemical denotes oxygen
M_99 722-744 pubtator:MESH:D029424:Disease denotes photosystem II decline
M_100 701-712 pubtator:MESH:D002734:Chemical denotes chlorophyll
M_101 1257-1272 pubtator:MESH:D008315:Chemical denotes malondialdehyde
M_102 1432-1445 pubtator:MESH:C011006:Chemical denotes jasmonic acid
M_103 133-137 pubtator:4530:Species denotes rice
M_104 310-314 pubtator:4530:Species denotes rice
M_105 1737-1741 pubtator:4530:Species denotes rice
M_106 1291-1301 pubtator:MESH:D013481:Chemical denotes superoxide
M_107 1186-1188 pubtator:MESH:D013481:Chemical denotes O2
M_108 1197-1201 pubtator:MESH:D014867:Chemical denotes H2O2
M_109 1394-1398 pubtator:MESH:D014867:Chemical denotes H2O2

21k_plant_trait_mention

Id Subject Object Predicate Lexical cue
M_0 145-160 funRiceGene:463, xzyao:11903 denotes leaf senescence
M_1 1560-1575 funRiceGene:463, xzyao:11903 denotes leaf senescence
M_2 1696-1711 funRiceGene:463, xzyao:11903 denotes leaf senescence
M_3 1450-1463 funRiceGene:339, xzyao:8823 denotes abscisic acid
M_4 1432-1440 funRiceGene:9 denotes jasmonic
M_5 1088-1094 funRiceGene:210 denotes blight
M_6 165-172 funRiceGene:445 denotes defence
M_7 994-1001 funRiceGene:445 denotes Defence
M_8 1127-1134 funRiceGene:445 denotes defence
M_9 1580-1587 funRiceGene:445 denotes defence
M_10 1716-1723 funRiceGene:445 denotes defence
M_11 139-160 xzyao:16067 denotes Plant leaf senescence
M_12 1078-1106 xzyao:8188 denotes bacterial blight inoculation
M_13 1554-1575 xzyao:15863 denotes early leaf senescence
M_14 145-149 PO:0025034, funRiceGene:469 denotes leaf
M_15 331-335 PO:0025034, funRiceGene:469 denotes leaf
M_16 671-675 PO:0025034, funRiceGene:469 denotes leaf
M_17 1560-1564 PO:0025034, funRiceGene:469 denotes leaf
M_18 1696-1700 PO:0025034, funRiceGene:469 denotes leaf
M_19 1078-1094 funRiceGene:3, xzyao:11888 denotes bacterial blight
M_20 451-468 funRiceGene:343 denotes pyrophosphorylase
M_21 774-785 funRiceGene:447 denotes chloroplast
M_22 145-160 xzyao:4013 denotes leaf senescence
M_23 1560-1575 xzyao:4013 denotes leaf senescence
M_24 1696-1711 xzyao:4013 denotes leaf senescence
M_25 1064-1074 funRiceGene:228 denotes resistance
M_26 774-797 xzyao:1197 denotes chloroplast degradation
M_27 1554-1575 WTO:0000133, funRiceGene:521, xzyao:13538 denotes early leaf senescence
M_28 150-160 funRiceGene:58 denotes senescence
M_29 853-863 funRiceGene:58 denotes senescence
M_30 1565-1575 funRiceGene:58 denotes senescence
M_31 1701-1711 funRiceGene:58 denotes senescence
M_32 1127-1143 funRiceGene:426, xzyao:10587 denotes defence response
M_33 722-733 funRiceGene:275 denotes photosystem
M_34 323-335 xzyao:13773 denotes spotted leaf
M_35 1432-1445 funRiceGene:387, xzyao:15685 denotes jasmonic acid
M_36 1197-1201 hunflair:NA:Chemical denotes H2O2
M_37 1394-1398 hunflair:NA:Chemical denotes H2O2
M_38 340-345 hunflair:NA:Gene denotes spl29
M_39 512-517 hunflair:NA:Gene denotes spl29
M_40 642-647 hunflair:NA:Gene denotes spl29
M_41 1032-1037 hunflair:NA:Gene denotes spl29
M_42 1218-1223 hunflair:NA:Gene denotes spl29
M_43 1363-1368 hunflair:NA:Gene denotes spl29
M_44 1484-1489 hunflair:NA:Gene denotes spl29
M_45 1605-1610 hunflair:NA:Gene denotes spl29
M_46 1257-1272 hunflair:NA:Chemical denotes malondialdehyde
M_47 1342-1350 hunflair:NA:Gene denotes catalase
M_48 31-50 hunflair:NA:Chemical denotes N-acetylglucosamine
M_49 431-450 hunflair:NA:Chemical denotes N-acetylglucosamine
M_50 701-712 hunflair:NA:Chemical denotes chlorophyll
M_51 72-76 hunflair:NA:Gene denotes UAP1
M_52 472-476 hunflair:NA:Gene denotes UAP1
M_53 1665-1669 hunflair:NA:Gene denotes UAP1
M_54 1218-1230 hunflair:NA:Species denotes spl29 plants
M_55 1484-1496 hunflair:NA:Species denotes spl29 plants
M_56 1432-1445 hunflair:NA:Chemical denotes jasmonic acid
M_57 1450-1463 hunflair:NA:Chemical denotes abscisic acid
M_58 352-357 hunflair:NA:Gene denotes SPL29
M_59 404-409 hunflair:NA:Gene denotes SPL29
M_60 774-785 hunflair:NA:Gene denotes chloroplast
M_61 27-30 hunflair:NA:Chemical denotes UDP
M_62 427-430 hunflair:NA:Chemical denotes UDP
M_63 1291-1301 hunflair:NA:Chemical denotes superoxide
M_64 1160-1166 hunflair:NA:Chemical denotes oxygen
M_65 323-338 hunflair:NA:Gene denotes spotted leaf 29
M_66 1291-1311 hunflair:NA:Gene denotes superoxide dismutase
M_67 27-70 hunflair:NA:Gene denotes UDP-N-acetylglucosamine pyrophosphorylase 1
M_68 427-470 hunflair:NA:Gene denotes UDP-N-acetylglucosamine pyrophosphorylase 1
M_69 133-137 hunflair:NA:Species denotes rice
M_70 310-314 hunflair:NA:Species denotes rice
M_71 1737-1741 hunflair:NA:Species denotes rice
M_72 722-736 hunflair:NA:Gene denotes photosystem II
M_73 524-527 hunflair:NA:Gene denotes UAP
M_74 574-577 hunflair:NA:Gene denotes UAP
M_75 1186-1188 pubtator:MESH:D013481:Chemical denotes O2
M_76 27-50 pubtator:MESH:D014537:Chemical denotes UDP-N-acetylglucosamine
M_77 427-450 pubtator:MESH:D014537:Chemical denotes UDP-N-acetylglucosamine
M_78 1197-1201 pubtator:MESH:D014867:Chemical denotes H2O2
M_79 1394-1398 pubtator:MESH:D014867:Chemical denotes H2O2
M_80 1291-1301 pubtator:MESH:D013481:Chemical denotes superoxide
M_81 1450-1463 pubtator:MESH:D000040:Chemical denotes abscisic acid
M_82 701-712 pubtator:MESH:D002734:Chemical denotes chlorophyll
M_83 1257-1272 pubtator:MESH:D008315:Chemical denotes malondialdehyde
M_84 1160-1166 pubtator:MESH:D010100:Chemical denotes oxygen
M_85 133-137 pubtator:4530:Species denotes rice
M_86 310-314 pubtator:4530:Species denotes rice
M_87 1737-1741 pubtator:4530:Species denotes rice
M_88 722-744 pubtator:MESH:D029424:Disease denotes photosystem II decline
M_89 1432-1445 pubtator:MESH:C011006:Chemical denotes jasmonic acid

OryzaGP_2022

Id Subject Object Predicate Lexical cue
T1 69-70 http://identifiers.org/oryzabase.gene/11216 denotes 1
T2 92-107 http://identifiers.org/oryzabase.gene/6151 denotes leaf senescence
T3 145-160 http://identifiers.org/oryzabase.gene/6151 denotes leaf senescence
T4 323-338 http://identifiers.org/oryzabase.gene/21609 denotes spotted leaf 29
T5 469-470 http://identifiers.org/oryzabase.gene/11216 denotes 1
T6 671-686 http://identifiers.org/oryzabase.gene/6151 denotes leaf senescence
T7 1291-1311 http://identifiers.org/oryzabase.gene/540 denotes superoxide dismutase
T8 1291-1311 http://identifiers.org/oryzabase.gene/20934 denotes superoxide dismutase
T9 1560-1575 http://identifiers.org/oryzabase.gene/6151 denotes leaf senescence
T10 1696-1711 http://identifiers.org/oryzabase.gene/6151 denotes leaf senescence

OryzaGP_2021_v2

Id Subject Object Predicate Lexical cue
T1 72-76 http://identifiers.org/oryzabase.gene/21609 denotes UAP1
T2 352-357 http://identifiers.org/oryzabase.gene/21609 denotes SPL29
T3 404-409 http://identifiers.org/oryzabase.gene/21609 denotes SPL29
T4 472-476 http://identifiers.org/oryzabase.gene/21609 denotes UAP1
T5 1665-1669 http://identifiers.org/oryzabase.gene/21609 denotes UAP1
T1111 72-76 http://identifiers.org/rapdb.locus/Os08g0206900 denotes UAP1
T97602 352-357 http://identifiers.org/rapdb.locus/Os08g0206900 denotes SPL29
T91085 404-409 http://identifiers.org/rapdb.locus/Os08g0206900 denotes SPL29
T13494 472-476 http://identifiers.org/rapdb.locus/Os08g0206900 denotes UAP1
T75670 1665-1669 http://identifiers.org/rapdb.locus/Os08g0206900 denotes UAP1

OryzaGP_2021_FLAIR

Id Subject Object Predicate Lexical cue
M_0 1450-1463 hunflair:NA:Chemical denotes abscisic acid
M_1 1291-1311 hunflair:NA:Gene denotes superoxide dismutase
M_2 323-338 hunflair:NA:Gene denotes spotted leaf 29
M_3 133-137 hunflair:NA:Species denotes rice
M_4 310-314 hunflair:NA:Species denotes rice
M_5 1737-1741 hunflair:NA:Species denotes rice
M_6 340-345 hunflair:NA:Gene denotes spl29
M_7 512-517 hunflair:NA:Gene denotes spl29
M_8 642-647 hunflair:NA:Gene denotes spl29
M_9 1032-1037 hunflair:NA:Gene denotes spl29
M_10 1218-1223 hunflair:NA:Gene denotes spl29
M_11 1363-1368 hunflair:NA:Gene denotes spl29
M_12 1484-1489 hunflair:NA:Gene denotes spl29
M_13 1605-1610 hunflair:NA:Gene denotes spl29
M_14 352-357 hunflair:NA:Gene denotes SPL29
M_15 404-409 hunflair:NA:Gene denotes SPL29
M_16 524-527 hunflair:NA:Gene denotes UAP
M_17 574-577 hunflair:NA:Gene denotes UAP
M_18 27-30 hunflair:NA:Chemical denotes UDP
M_19 427-430 hunflair:NA:Chemical denotes UDP
M_20 1257-1272 hunflair:NA:Chemical denotes malondialdehyde
M_21 1432-1445 hunflair:NA:Chemical denotes jasmonic acid
M_22 701-712 hunflair:NA:Chemical denotes chlorophyll
M_23 774-785 hunflair:NA:Gene denotes chloroplast
M_24 1160-1166 hunflair:NA:Chemical denotes oxygen
M_25 1291-1301 hunflair:NA:Chemical denotes superoxide
M_26 72-76 hunflair:NA:Gene denotes UAP1
M_27 472-476 hunflair:NA:Gene denotes UAP1
M_28 1665-1669 hunflair:NA:Gene denotes UAP1
M_29 1342-1350 hunflair:NA:Gene denotes catalase
M_30 31-50 hunflair:NA:Chemical denotes N-acetylglucosamine
M_31 431-450 hunflair:NA:Chemical denotes N-acetylglucosamine
M_32 1197-1201 hunflair:NA:Chemical denotes H2O2
M_33 1394-1398 hunflair:NA:Chemical denotes H2O2
M_34 1218-1230 hunflair:NA:Species denotes spl29 plants
M_35 1484-1496 hunflair:NA:Species denotes spl29 plants
M_36 27-70 hunflair:NA:Gene denotes UDP-N-acetylglucosamine pyrophosphorylase 1
M_37 427-470 hunflair:NA:Gene denotes UDP-N-acetylglucosamine pyrophosphorylase 1
M_38 722-736 hunflair:NA:Gene denotes photosystem II

OryzaGP

Id Subject Object Predicate Lexical cue
T1 27-70 gene denotes UDP-N-acetylglucosamine pyrophosphorylase 1
T2 72-76 gene denotes UAP1
T3 323-338 gene denotes spotted leaf 29
T4 427-470 gene denotes UDP-N-acetylglucosamine pyrophosphorylase 1
T5 472-476 gene denotes UAP1
T6 774-785 gene denotes chloroplast
T7 1291-1311 gene denotes superoxide dismutase
T8 1665-1669 gene denotes UAP1

Oryza_sentences

Id Subject Object Predicate Lexical cue
T1 0-138 Sentence denotes Functional inactivation of UDP-N-acetylglucosamine pyrophosphorylase 1 (UAP1) induces early leaf senescence and defence responses in rice.
T2 139-281 Sentence denotes Plant leaf senescence and defence responses are important biological processes, but the molecular mechanisms involved are not well understood.
T3 282-347 Sentence denotes This study identified a new rice mutant, spotted leaf 29 (spl29).
T4 348-500 Sentence denotes The SPL29 gene was identified by map-based cloning, and SPL29 was confirmed as UDP-N-acetylglucosamine pyrophosphorylase 1 (UAP1) by enzymatic analysis.
T5 501-537 Sentence denotes The mutant spl29 lacks UAP activity.
T6 538-637 Sentence denotes The biological phenotypes for which UAP is responsible have not previously been reported in plants.
T7 638-993 Sentence denotes The spl29 mutant displayed early leaf senescence, confirmed by chlorophyll loss and photosystem II decline as physiological indicators, chloroplast degradation as a cellular characteristic, and both upregulation of senescence transcription factors and senescence-associated genes, and downregulation of photosynthesis-related genes, as molecular evidence.
T8 994-1150 Sentence denotes Defence responses were induced in the spl29 mutant, shown by enhanced resistance to bacterial blight inoculation and upregulation of defence response genes.
T9 1151-1281 Sentence denotes Reactive oxygen species, including O2 (-) and H2O2, accumulated in spl29 plants; there was also increased malondialdehyde content.
T10 1282-1412 Sentence denotes Enhanced superoxide dismutase activity combined with normal catalase activity in spl29 could be responsible for H2O2 accumulation.
T11 1413-1497 Sentence denotes The plant hormones jasmonic acid and abscisic acid also accumulated in spl29 plants.
T12 1498-1618 Sentence denotes ROS and plant hormones probably play important roles in early leaf senescence and defence responses in the spl29 mutant.
T13 1619-1742 Sentence denotes Based on these findings, it is suggested that UAP1 is involved in regulating leaf senescence and defence responses in rice.

Oryza_sentences

Id Subject Object Predicate Lexical cue
T1 0-138 Sentence denotes Functional inactivation of UDP-N-acetylglucosamine pyrophosphorylase 1 (UAP1) induces early leaf senescence and defence responses in rice.
T2 139-281 Sentence denotes Plant leaf senescence and defence responses are important biological processes, but the molecular mechanisms involved are not well understood.
T3 282-347 Sentence denotes This study identified a new rice mutant, spotted leaf 29 (spl29).
T4 348-500 Sentence denotes The SPL29 gene was identified by map-based cloning, and SPL29 was confirmed as UDP-N-acetylglucosamine pyrophosphorylase 1 (UAP1) by enzymatic analysis.
T5 501-537 Sentence denotes The mutant spl29 lacks UAP activity.
T6 538-637 Sentence denotes The biological phenotypes for which UAP is responsible have not previously been reported in plants.
T7 638-993 Sentence denotes The spl29 mutant displayed early leaf senescence, confirmed by chlorophyll loss and photosystem II decline as physiological indicators, chloroplast degradation as a cellular characteristic, and both upregulation of senescence transcription factors and senescence-associated genes, and downregulation of photosynthesis-related genes, as molecular evidence.
T8 994-1150 Sentence denotes Defence responses were induced in the spl29 mutant, shown by enhanced resistance to bacterial blight inoculation and upregulation of defence response genes.
T9 1151-1281 Sentence denotes Reactive oxygen species, including O2 (-) and H2O2, accumulated in spl29 plants; there was also increased malondialdehyde content.
T10 1282-1412 Sentence denotes Enhanced superoxide dismutase activity combined with normal catalase activity in spl29 could be responsible for H2O2 accumulation.
T11 1413-1497 Sentence denotes The plant hormones jasmonic acid and abscisic acid also accumulated in spl29 plants.
T12 1498-1618 Sentence denotes ROS and plant hormones probably play important roles in early leaf senescence and defence responses in the spl29 mutant.
T13 1619-1742 Sentence denotes Based on these findings, it is suggested that UAP1 is involved in regulating leaf senescence and defence responses in rice.

Oryza_sentences

Id Subject Object Predicate Lexical cue
T1 0-138 Sentence denotes Functional inactivation of UDP-N-acetylglucosamine pyrophosphorylase 1 (UAP1) induces early leaf senescence and defence responses in rice.
T2 139-281 Sentence denotes Plant leaf senescence and defence responses are important biological processes, but the molecular mechanisms involved are not well understood.
T3 282-347 Sentence denotes This study identified a new rice mutant, spotted leaf 29 (spl29).
T4 348-500 Sentence denotes The SPL29 gene was identified by map-based cloning, and SPL29 was confirmed as UDP-N-acetylglucosamine pyrophosphorylase 1 (UAP1) by enzymatic analysis.
T5 501-537 Sentence denotes The mutant spl29 lacks UAP activity.
T6 538-637 Sentence denotes The biological phenotypes for which UAP is responsible have not previously been reported in plants.
T7 638-993 Sentence denotes The spl29 mutant displayed early leaf senescence, confirmed by chlorophyll loss and photosystem II decline as physiological indicators, chloroplast degradation as a cellular characteristic, and both upregulation of senescence transcription factors and senescence-associated genes, and downregulation of photosynthesis-related genes, as molecular evidence.
T8 994-1150 Sentence denotes Defence responses were induced in the spl29 mutant, shown by enhanced resistance to bacterial blight inoculation and upregulation of defence response genes.
T9 1151-1281 Sentence denotes Reactive oxygen species, including O2 (-) and H2O2, accumulated in spl29 plants; there was also increased malondialdehyde content.
T10 1282-1412 Sentence denotes Enhanced superoxide dismutase activity combined with normal catalase activity in spl29 could be responsible for H2O2 accumulation.
T11 1413-1497 Sentence denotes The plant hormones jasmonic acid and abscisic acid also accumulated in spl29 plants.
T12 1498-1618 Sentence denotes ROS and plant hormones probably play important roles in early leaf senescence and defence responses in the spl29 mutant.
T13 1619-1742 Sentence denotes Based on these findings, it is suggested that UAP1 is involved in regulating leaf senescence and defence responses in rice.

Oryza_sentences

Id Subject Object Predicate Lexical cue
T1 0-138 Sentence denotes Functional inactivation of UDP-N-acetylglucosamine pyrophosphorylase 1 (UAP1) induces early leaf senescence and defence responses in rice.
T2 139-281 Sentence denotes Plant leaf senescence and defence responses are important biological processes, but the molecular mechanisms involved are not well understood.
T3 282-347 Sentence denotes This study identified a new rice mutant, spotted leaf 29 (spl29).
T4 348-500 Sentence denotes The SPL29 gene was identified by map-based cloning, and SPL29 was confirmed as UDP-N-acetylglucosamine pyrophosphorylase 1 (UAP1) by enzymatic analysis.
T5 501-537 Sentence denotes The mutant spl29 lacks UAP activity.
T6 538-637 Sentence denotes The biological phenotypes for which UAP is responsible have not previously been reported in plants.
T7 638-993 Sentence denotes The spl29 mutant displayed early leaf senescence, confirmed by chlorophyll loss and photosystem II decline as physiological indicators, chloroplast degradation as a cellular characteristic, and both upregulation of senescence transcription factors and senescence-associated genes, and downregulation of photosynthesis-related genes, as molecular evidence.
T8 994-1150 Sentence denotes Defence responses were induced in the spl29 mutant, shown by enhanced resistance to bacterial blight inoculation and upregulation of defence response genes.
T9 1151-1281 Sentence denotes Reactive oxygen species, including O2 (-) and H2O2, accumulated in spl29 plants; there was also increased malondialdehyde content.
T10 1282-1412 Sentence denotes Enhanced superoxide dismutase activity combined with normal catalase activity in spl29 could be responsible for H2O2 accumulation.
T11 1413-1497 Sentence denotes The plant hormones jasmonic acid and abscisic acid also accumulated in spl29 plants.
T12 1498-1618 Sentence denotes ROS and plant hormones probably play important roles in early leaf senescence and defence responses in the spl29 mutant.
T13 1619-1742 Sentence denotes Based on these findings, it is suggested that UAP1 is involved in regulating leaf senescence and defence responses in rice.