PubMed:25371494
Annnotations
Glycan-Motif
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 665-676 | https://glytoucan.org/Structures/Glycans/G43702JT | denotes | chondroitin |
GlyCosmos6-Glycan-Motif-Image
| Id | Subject | Object | Predicate | Lexical cue | image |
|---|---|---|---|---|---|
| T1 | 665-676 | Glycan_Motif | denotes | chondroitin | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G43702JT |
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| TextSentencer_T1 | 0-77 | Sentence | denotes | Versican in inflammation and tissue remodeling: the impact on lung disorders. |
| TextSentencer_T2 | 78-174 | Sentence | denotes | Versican is a proteoglycan that has many different roles in tissue homeostasis and inflammation. |
| TextSentencer_T3 | 175-485 | Sentence | denotes | The biochemical structure comprises four different types of the core protein with attached glycosaminoglycans (GAGs) that can be sulfated to various extents and has the capacity to regulate differentiation of different cell types, migration, cell adhesion, proliferation, tissue stabilization and inflammation. |
| TextSentencer_T4 | 486-606 | Sentence | denotes | Versican's regulatory properties are of importance during both homeostasis and changes that lead to disease progression. |
| TextSentencer_T5 | 607-808 | Sentence | denotes | The GAGs that are attached to the core protein are of the chondroitin sulfate/dermatan sulfate type and are known to be important in inflammation through interactions with cytokines and growth factors. |
| TextSentencer_T6 | 809-985 | Sentence | denotes | For a more complex understanding of versican, it is of importance to study the tissue niche, where the wound healing process in both healthy and diseased conditions take place. |
| TextSentencer_T7 | 986-1309 | Sentence | denotes | In previous studies, our group has identified changes in the amount of the multifaceted versican in chronic lung disorders such as asthma, chronic obstructive pulmonary disease, and bronchiolitis obliterans syndrome, which could be a result of pathologic, transforming growth factor β driven, on-going remodeling processes. |
| TextSentencer_T8 | 1310-1474 | Sentence | denotes | Reversely, the context of versican in its niche is of great importance since versican has been reported to have a beneficial role in other contexts, e.g. emphysema. |
| TextSentencer_T9 | 1475-1561 | Sentence | denotes | Here we explore the vast mechanisms of versican in healthy lung and in lung disorders. |
| T1 | 0-77 | Sentence | denotes | Versican in inflammation and tissue remodeling: the impact on lung disorders. |
| T2 | 78-174 | Sentence | denotes | Versican is a proteoglycan that has many different roles in tissue homeostasis and inflammation. |
| T3 | 175-485 | Sentence | denotes | The biochemical structure comprises four different types of the core protein with attached glycosaminoglycans (GAGs) that can be sulfated to various extents and has the capacity to regulate differentiation of different cell types, migration, cell adhesion, proliferation, tissue stabilization and inflammation. |
| T4 | 486-606 | Sentence | denotes | Versican's regulatory properties are of importance during both homeostasis and changes that lead to disease progression. |
| T5 | 607-808 | Sentence | denotes | The GAGs that are attached to the core protein are of the chondroitin sulfate/dermatan sulfate type and are known to be important in inflammation through interactions with cytokines and growth factors. |
| T6 | 809-985 | Sentence | denotes | For a more complex understanding of versican, it is of importance to study the tissue niche, where the wound healing process in both healthy and diseased conditions take place. |
| T7 | 986-1309 | Sentence | denotes | In previous studies, our group has identified changes in the amount of the multifaceted versican in chronic lung disorders such as asthma, chronic obstructive pulmonary disease, and bronchiolitis obliterans syndrome, which could be a result of pathologic, transforming growth factor β driven, on-going remodeling processes. |
| T8 | 1310-1474 | Sentence | denotes | Reversely, the context of versican in its niche is of great importance since versican has been reported to have a beneficial role in other contexts, e.g. emphysema. |
| T9 | 1475-1561 | Sentence | denotes | Here we explore the vast mechanisms of versican in healthy lung and in lung disorders. |
| T1 | 0-77 | Sentence | denotes | Versican in inflammation and tissue remodeling: the impact on lung disorders. |
| T2 | 78-174 | Sentence | denotes | Versican is a proteoglycan that has many different roles in tissue homeostasis and inflammation. |
| T3 | 175-485 | Sentence | denotes | The biochemical structure comprises four different types of the core protein with attached glycosaminoglycans (GAGs) that can be sulfated to various extents and has the capacity to regulate differentiation of different cell types, migration, cell adhesion, proliferation, tissue stabilization and inflammation. |
| T4 | 486-606 | Sentence | denotes | Versican's regulatory properties are of importance during both homeostasis and changes that lead to disease progression. |
| T5 | 607-808 | Sentence | denotes | The GAGs that are attached to the core protein are of the chondroitin sulfate/dermatan sulfate type and are known to be important in inflammation through interactions with cytokines and growth factors. |
| T6 | 809-985 | Sentence | denotes | For a more complex understanding of versican, it is of importance to study the tissue niche, where the wound healing process in both healthy and diseased conditions take place. |
| T7 | 986-1309 | Sentence | denotes | In previous studies, our group has identified changes in the amount of the multifaceted versican in chronic lung disorders such as asthma, chronic obstructive pulmonary disease, and bronchiolitis obliterans syndrome, which could be a result of pathologic, transforming growth factor β driven, on-going remodeling processes. |
| T8 | 1310-1474 | Sentence | denotes | Reversely, the context of versican in its niche is of great importance since versican has been reported to have a beneficial role in other contexts, e.g. emphysema. |
| T9 | 1475-1561 | Sentence | denotes | Here we explore the vast mechanisms of versican in healthy lung and in lung disorders. |
GlyCosmos6-Glycan-Motif-Structure
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 665-676 | https://glytoucan.org/Structures/Glycans/G43702JT | denotes | chondroitin |
Glycosmos6-GlycoEpitope
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 665-676 | http://www.glycoepitope.jp/epitopes/EP0081 | denotes | chondroitin |
Glycosmos6-MAT
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 62-66 | http://purl.obolibrary.org/obo/MAT_0000135 | denotes | lung |
| T2 | 1094-1098 | http://purl.obolibrary.org/obo/MAT_0000135 | denotes | lung |
| T3 | 1534-1538 | http://purl.obolibrary.org/obo/MAT_0000135 | denotes | lung |
| T4 | 1546-1550 | http://purl.obolibrary.org/obo/MAT_0000135 | denotes | lung |
Inflammaging
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-77 | Sentence | denotes | Versican in inflammation and tissue remodeling: the impact on lung disorders. |
| T2 | 78-174 | Sentence | denotes | Versican is a proteoglycan that has many different roles in tissue homeostasis and inflammation. |
| T3 | 175-485 | Sentence | denotes | The biochemical structure comprises four different types of the core protein with attached glycosaminoglycans (GAGs) that can be sulfated to various extents and has the capacity to regulate differentiation of different cell types, migration, cell adhesion, proliferation, tissue stabilization and inflammation. |
| T4 | 486-606 | Sentence | denotes | Versican's regulatory properties are of importance during both homeostasis and changes that lead to disease progression. |
| T5 | 607-808 | Sentence | denotes | The GAGs that are attached to the core protein are of the chondroitin sulfate/dermatan sulfate type and are known to be important in inflammation through interactions with cytokines and growth factors. |
| T6 | 809-985 | Sentence | denotes | For a more complex understanding of versican, it is of importance to study the tissue niche, where the wound healing process in both healthy and diseased conditions take place. |
| T7 | 986-1309 | Sentence | denotes | In previous studies, our group has identified changes in the amount of the multifaceted versican in chronic lung disorders such as asthma, chronic obstructive pulmonary disease, and bronchiolitis obliterans syndrome, which could be a result of pathologic, transforming growth factor β driven, on-going remodeling processes. |
| T8 | 1310-1474 | Sentence | denotes | Reversely, the context of versican in its niche is of great importance since versican has been reported to have a beneficial role in other contexts, e.g. emphysema. |
| T9 | 1475-1561 | Sentence | denotes | Here we explore the vast mechanisms of versican in healthy lung and in lung disorders. |
| T1 | 0-77 | Sentence | denotes | Versican in inflammation and tissue remodeling: the impact on lung disorders. |
| T2 | 78-174 | Sentence | denotes | Versican is a proteoglycan that has many different roles in tissue homeostasis and inflammation. |
| T3 | 175-485 | Sentence | denotes | The biochemical structure comprises four different types of the core protein with attached glycosaminoglycans (GAGs) that can be sulfated to various extents and has the capacity to regulate differentiation of different cell types, migration, cell adhesion, proliferation, tissue stabilization and inflammation. |
| T4 | 486-606 | Sentence | denotes | Versican's regulatory properties are of importance during both homeostasis and changes that lead to disease progression. |
| T5 | 607-808 | Sentence | denotes | The GAGs that are attached to the core protein are of the chondroitin sulfate/dermatan sulfate type and are known to be important in inflammation through interactions with cytokines and growth factors. |
| T6 | 809-985 | Sentence | denotes | For a more complex understanding of versican, it is of importance to study the tissue niche, where the wound healing process in both healthy and diseased conditions take place. |
| T7 | 986-1309 | Sentence | denotes | In previous studies, our group has identified changes in the amount of the multifaceted versican in chronic lung disorders such as asthma, chronic obstructive pulmonary disease, and bronchiolitis obliterans syndrome, which could be a result of pathologic, transforming growth factor β driven, on-going remodeling processes. |
| T8 | 1310-1474 | Sentence | denotes | Reversely, the context of versican in its niche is of great importance since versican has been reported to have a beneficial role in other contexts, e.g. emphysema. |
| T9 | 1475-1561 | Sentence | denotes | Here we explore the vast mechanisms of versican in healthy lung and in lung disorders. |
PubmedHPO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 1094-1108 | HP_0002088 | denotes | lung disorders |
| T2 | 1117-1123 | HP_0002099 | denotes | asthma |
| T3 | 1125-1162 | HP_0006510 | denotes | chronic obstructive pulmonary disease |
| T4 | 1546-1560 | HP_0002088 | denotes | lung disorders |
ICD10
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 1117-1123 | http://purl.bioontology.org/ontology/ICD10/J45 | denotes | asthma |
| T2 | 1117-1123 | http://purl.bioontology.org/ontology/ICD10/J45.9 | denotes | asthma |
| T3 | 1125-1154 | http://purl.bioontology.org/ontology/ICD10/J44.9 | denotes | chronic obstructive pulmonary |
| T4 | 1125-1162 | http://purl.bioontology.org/ontology/ICD10/J44.9 | denotes | chronic obstructive pulmonary disease |
| T5 | 1133-1162 | http://purl.bioontology.org/ontology/ICD10/J44.9 | denotes | obstructive pulmonary disease |
| T6 | 1125-1162 | http://purl.bioontology.org/ontology/ICD10/J44 | denotes | chronic obstructive pulmonary disease |
| T7 | 1464-1473 | http://purl.bioontology.org/ontology/ICD10/J43.9 | denotes | emphysema |
| T8 | 1464-1473 | http://purl.bioontology.org/ontology/ICD10/J43 | denotes | emphysema |
GlycoBiology-FMA
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| _T1 | 0-8 | FMAID:82823 | denotes | Versican |
| _T2 | 0-8 | FMAID:196822 | denotes | Versican |
| _T3 | 29-35 | FMAID:256050 | denotes | tissue |
| _T4 | 62-66 | FMAID:93670 | denotes | lung |
| _T5 | 62-66 | FMAID:169341 | denotes | lung |
| _T6 | 62-66 | FMAID:7195 | denotes | lung |
| _T7 | 78-86 | FMAID:82823 | denotes | Versican |
| _T8 | 78-86 | FMAID:196822 | denotes | Versican |
| _T9 | 92-104 | FMAID:167397 | denotes | proteoglycan |
| _T10 | 92-104 | FMAID:63015 | denotes | proteoglycan |
| _T11 | 138-144 | FMAID:256050 | denotes | tissue |
| _T12 | 244-251 | FMAID:67257 | denotes | protein |
| _T13 | 244-251 | FMAID:165447 | denotes | protein |
| _T14 | 266-284 | FMAID:63011 | denotes | glycosaminoglycans |
| _T15 | 266-284 | FMAID:167395 | denotes | glycosaminoglycans |
| _T16 | 286-290 | FMAID:167404 | denotes | GAGs |
| _T17 | 365-398 | FMAID:171183 | denotes | differentiation of different cell |
| _T18 | 365-398 | FMAID:70340 | denotes | differentiation of different cell |
| _T19 | 447-453 | FMAID:256050 | denotes | tissue |
| _T20 | 486-494 | FMAID:196822 | denotes | Versican |
| _T21 | 486-494 | FMAID:82823 | denotes | Versican |
| _T22 | 611-615 | FMAID:167404 | denotes | GAGs |
| _T23 | 646-653 | FMAID:67257 | denotes | protein |
| _T24 | 646-653 | FMAID:165447 | denotes | protein |
| _T25 | 677-701 | FMAID:167406 | denotes | sulfate/dermatan sulfate |
| _T26 | 677-701 | FMAID:63024 | denotes | sulfate/dermatan sulfate |
| _T27 | 685-693 | FMAID:165189 | denotes | dermatan |
| _T28 | 685-693 | FMAID:67104 | denotes | dermatan |
| _T29 | 685-701 | FMAID:165192 | denotes | dermatan sulfate |
| _T30 | 779-788 | FMAID:84050 | denotes | cytokines |
| _T31 | 779-788 | FMAID:197972 | denotes | cytokines |
| _T32 | 845-853 | FMAID:196822 | denotes | versican |
| _T33 | 845-853 | FMAID:82823 | denotes | versican |
| _T34 | 888-894 | FMAID:256050 | denotes | tissue |
| _T35 | 1074-1082 | FMAID:82823 | denotes | versican |
| _T36 | 1074-1082 | FMAID:196822 | denotes | versican |
| _T37 | 1094-1098 | FMAID:93670 | denotes | lung |
| _T38 | 1094-1098 | FMAID:7195 | denotes | lung |
| _T39 | 1094-1098 | FMAID:169341 | denotes | lung |
| _T40 | 1145-1154 | FMAID:171535 | denotes | pulmonary |
| _T41 | 1145-1154 | FMAID:66326 | denotes | pulmonary |
| _T42 | 1168-1181 | FMAID:183174 | denotes | bronchiolitis |
| _T43 | 1168-1181 | FMAID:94055 | denotes | bronchiolitis |
| _T44 | 1168-1181 | FMAID:191876 | denotes | bronchiolitis |
| _T45 | 1168-1181 | FMAID:190802 | denotes | bronchiolitis |
| _T46 | 1168-1181 | FMAID:7410 | denotes | bronchiolitis |
| _T47 | 1336-1344 | FMAID:196822 | denotes | versican |
| _T48 | 1336-1344 | FMAID:82823 | denotes | versican |
| _T49 | 1387-1395 | FMAID:82823 | denotes | versican |
| _T50 | 1387-1395 | FMAID:196822 | denotes | versican |
| _T51 | 1514-1522 | FMAID:196822 | denotes | versican |
| _T52 | 1514-1522 | FMAID:82823 | denotes | versican |
| _T53 | 1534-1538 | FMAID:169341 | denotes | lung |
| _T54 | 1534-1538 | FMAID:93670 | denotes | lung |
| _T55 | 1534-1538 | FMAID:7195 | denotes | lung |
| _T56 | 1546-1550 | FMAID:169341 | denotes | lung |
| _T57 | 1546-1550 | FMAID:93670 | denotes | lung |
| _T58 | 1546-1550 | FMAID:7195 | denotes | lung |
uniprot-human
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 1255-1270 | http://www.uniprot.org/uniprot/P01138 | denotes | growth factor β |
uniprot-mouse
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 1364-1369 | http://www.uniprot.org/uniprot/Q91ZZ5 | denotes | great |
GlycoBiology-NCBITAXON
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 29-35 | http://purl.bioontology.org/ontology/STY/T024 | denotes | tissue |
| T2 | 114-118 | http://purl.bioontology.org/ontology/NCBITAXON/9973 | denotes | many |
| T3 | 138-144 | http://purl.bioontology.org/ontology/STY/T024 | denotes | tissue |
| T4 | 447-453 | http://purl.bioontology.org/ontology/STY/T024 | denotes | tissue |
| T5 | 888-894 | http://purl.bioontology.org/ontology/STY/T024 | denotes | tissue |
| T6 | 1011-1016 | http://purl.bioontology.org/ontology/STY/T096 | denotes | group |
| T7 | 1145-1154 | http://purl.bioontology.org/ontology/NCBITAXON/136615 | denotes | pulmonary |
| T8 | 1282-1287 | http://purl.bioontology.org/ontology/NCBITAXON/390446 | denotes | going |
| T9 | 1500-1510 | http://purl.bioontology.org/ontology/NCBITAXON/127244 | denotes | mechanisms |
GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 12-24 | http://purl.obolibrary.org/obo/GO_0006954 | denotes | inflammation |
| T2 | 161-173 | http://purl.obolibrary.org/obo/GO_0006954 | denotes | inflammation |
| T3 | 472-484 | http://purl.obolibrary.org/obo/GO_0006954 | denotes | inflammation |
| T4 | 740-752 | http://purl.obolibrary.org/obo/GO_0006954 | denotes | inflammation |
| T5 | 29-46 | http://purl.obolibrary.org/obo/GO_0048771 | denotes | tissue remodeling |
| T6 | 138-156 | http://purl.obolibrary.org/obo/GO_0001894 | denotes | tissue homeostasis |
| T7 | 145-156 | http://purl.obolibrary.org/obo/GO_0042592 | denotes | homeostasis |
| T8 | 549-560 | http://purl.obolibrary.org/obo/GO_0042592 | denotes | homeostasis |
| T9 | 145-156 | http://purl.obolibrary.org/obo/GO_0033484 | denotes | homeostasis |
| T10 | 549-560 | http://purl.obolibrary.org/obo/GO_0033484 | denotes | homeostasis |
| T11 | 304-312 | http://purl.obolibrary.org/obo/GO_0051923 | denotes | sulfated |
| T12 | 677-684 | http://purl.obolibrary.org/obo/GO_0051923 | denotes | sulfate |
| T13 | 694-701 | http://purl.obolibrary.org/obo/GO_0051923 | denotes | sulfate |
| T14 | 356-364 | http://purl.obolibrary.org/obo/GO_0065007 | denotes | regulate |
| T15 | 406-421 | http://purl.obolibrary.org/obo/GO_0016477 | denotes | migration, cell |
| T16 | 417-430 | http://purl.obolibrary.org/obo/GO_0007155 | denotes | cell adhesion |
| T17 | 793-799 | http://purl.obolibrary.org/obo/GO_0040007 | denotes | growth |
| T18 | 1255-1261 | http://purl.obolibrary.org/obo/GO_0040007 | denotes | growth |
| T19 | 912-925 | http://purl.obolibrary.org/obo/GO_0042060 | denotes | wound healing |
GO-CC
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 239-243 | http://purl.obolibrary.org/obo/GO_0019013 | denotes | core |
| T2 | 641-645 | http://purl.obolibrary.org/obo/GO_0019013 | denotes | core |
| T3 | 394-398 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
| T4 | 417-421 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
UBERON-AE
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 29-35 | http://purl.obolibrary.org/obo/UBERON_0000479 | denotes | tissue |
| T2 | 138-144 | http://purl.obolibrary.org/obo/UBERON_0000479 | denotes | tissue |
| T3 | 447-453 | http://purl.obolibrary.org/obo/UBERON_0000479 | denotes | tissue |
| T4 | 888-894 | http://purl.obolibrary.org/obo/UBERON_0000479 | denotes | tissue |
| T5 | 62-66 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lung |
| T6 | 1094-1098 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lung |
| T7 | 1534-1538 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lung |
| T8 | 1546-1550 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lung |
| T9 | 1168-1181 | http://purl.obolibrary.org/obo/UBERON_0002186 | denotes | bronchiolitis |
EDAM-topics
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 244-251 | http://edamontology.org/topic_0078 | denotes | protein |
| T2 | 586-593 | http://edamontology.org/topic_0634 | denotes | disease |
| T3 | 646-653 | http://edamontology.org/topic_0078 | denotes | protein |
| T4 | 761-773 | http://edamontology.org/topic_0602 | denotes | interactions |
| T5 | 878-883 | http://edamontology.org/topic_3678 | denotes | study |
| T6 | 942-962 | http://edamontology.org/topic_3063 | denotes | healthy and diseased |
| T7 | 954-962 | http://edamontology.org/topic_0634 | denotes | diseased |
| T8 | 998-1005 | http://edamontology.org/topic_3678 | denotes | studies |
| T9 | 1155-1162 | http://edamontology.org/topic_0634 | denotes | disease |
| T10 | 1230-1240 | http://edamontology.org/topic_0634 | denotes | pathologic |
EDAM-DFO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 191-200 | http://edamontology.org/data_0883 | denotes | structure |
| T2 | 226-231 | http://edamontology.org/data_2100 | denotes | types |
| T3 | 244-251 | http://edamontology.org/format_1208 | denotes | protein |
| T4 | 244-251 | http://edamontology.org/data_1467 | denotes | protein |
| T5 | 399-404 | http://edamontology.org/data_2100 | denotes | types |
| T6 | 646-653 | http://edamontology.org/data_1467 | denotes | protein |
| T7 | 646-653 | http://edamontology.org/format_1208 | denotes | protein |
| T8 | 926-933 | http://edamontology.org/operation_2409 | denotes | process |
| T9 | 926-933 | http://edamontology.org/operation_0004 | denotes | process |
| T10 | 1021-1031 | http://edamontology.org/data_2611 | denotes | identified |
| T11 | 1021-1031 | http://edamontology.org/data_0842 | denotes | identified |
| T12 | 1282-1287 | http://edamontology.org/data_1716 | denotes | going |
| T13 | 1299-1308 | http://edamontology.org/operation_2409 | denotes | processes |
| T14 | 1299-1308 | http://edamontology.org/operation_0004 | denotes | processes |
| T15 | 1405-1413 | http://edamontology.org/data_2048 | denotes | reported |
DisGeNET5_gene_disease
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 25371494-0#0#8#gene1462 | 0-8 | gene1462 | denotes | Versican |
| 25371494-0#62#76#diseaseC0024115 | 62-76 | diseaseC0024115 | denotes | lung disorders |
| 25371494-6#88#96#gene1462 | 1074-1082 | gene1462 | denotes | versican |
| 25371494-6#182#206#diseaseC0006272 | 1168-1192 | diseaseC0006272 | denotes | bronchiolitis obliterans |
| 25371494-7#26#34#gene1462 | 1336-1344 | gene1462 | denotes | versican |
| 25371494-7#77#85#gene1462 | 1387-1395 | gene1462 | denotes | versican |
| 25371494-7#154#163#diseaseC0034067 | 1464-1473 | diseaseC0034067 | denotes | emphysema |
| 0#8#gene146262#76#diseaseC0024115 | 25371494-0#0#8#gene1462 | 25371494-0#62#76#diseaseC0024115 | associated_with | Versican,lung disorders |
| 88#96#gene1462182#206#diseaseC0006272 | 25371494-6#88#96#gene1462 | 25371494-6#182#206#diseaseC0006272 | associated_with | versican,bronchiolitis obliterans |
| 26#34#gene1462154#163#diseaseC0034067 | 25371494-7#26#34#gene1462 | 25371494-7#154#163#diseaseC0034067 | associated_with | versican,emphysema |
| 77#85#gene1462154#163#diseaseC0034067 | 25371494-7#77#85#gene1462 | 25371494-7#154#163#diseaseC0034067 | associated_with | versican,emphysema |
GlycoBiology-MAT
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 62-66 | http://purl.obolibrary.org/obo/MAT_0000135 | denotes | lung |
| T2 | 1094-1098 | http://purl.obolibrary.org/obo/MAT_0000135 | denotes | lung |
| T3 | 1534-1538 | http://purl.obolibrary.org/obo/MAT_0000135 | denotes | lung |
| T4 | 1546-1550 | http://purl.obolibrary.org/obo/MAT_0000135 | denotes | lung |
performance-test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| PD-UBERON-AE-B_T1 | 29-35 | http://purl.obolibrary.org/obo/UBERON_0000479 | denotes | tissue |
| PD-UBERON-AE-B_T2 | 138-144 | http://purl.obolibrary.org/obo/UBERON_0000479 | denotes | tissue |
| PD-UBERON-AE-B_T3 | 447-453 | http://purl.obolibrary.org/obo/UBERON_0000479 | denotes | tissue |
| PD-UBERON-AE-B_T4 | 888-894 | http://purl.obolibrary.org/obo/UBERON_0000479 | denotes | tissue |
| PD-UBERON-AE-B_T5 | 62-66 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lung |
| PD-UBERON-AE-B_T6 | 1094-1098 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lung |
| PD-UBERON-AE-B_T7 | 1534-1538 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lung |
| PD-UBERON-AE-B_T8 | 1546-1550 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lung |
| PD-UBERON-AE-B_T9 | 1168-1181 | http://purl.obolibrary.org/obo/UBERON_0002186 | denotes | bronchiolitis |
GlycoBiology-Motifs
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 665-676 | http://rdf.glycoinfo.org/glycan/G00018MO | denotes | chondroitin |
| T2 | 665-684 | http://rdf.glycoinfo.org/glycan/G00018MO | denotes | chondroitin sulfate |
| T3 | 685-701 | http://rdf.glycoinfo.org/glycan/G00019MO | denotes | dermatan sulfate |
GlycoBiology-Epitope
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| PD-GlycoEpitope-B_T1 | 665-676 | http://www.glycoepitope.jp/epitopes/EP0081 | denotes | chondroitin |
mondo_disease
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T1 | 12-24 | Disease | denotes | inflammation | http://purl.obolibrary.org/obo/MONDO_0021166 |
| T2 | 62-76 | Disease | denotes | lung disorders | http://purl.obolibrary.org/obo/MONDO_0005275 |
| T3 | 161-173 | Disease | denotes | inflammation | http://purl.obolibrary.org/obo/MONDO_0021166 |
| T4 | 472-484 | Disease | denotes | inflammation | http://purl.obolibrary.org/obo/MONDO_0021166 |
| T5 | 740-752 | Disease | denotes | inflammation | http://purl.obolibrary.org/obo/MONDO_0021166 |
| T6 | 912-917 | Disease | denotes | wound | http://purl.obolibrary.org/obo/MONDO_0021178 |
| T7 | 1094-1108 | Disease | denotes | lung disorders | http://purl.obolibrary.org/obo/MONDO_0005275 |
| T8 | 1117-1123 | Disease | denotes | asthma | http://purl.obolibrary.org/obo/MONDO_0004979 |
| T9 | 1125-1162 | Disease | denotes | chronic obstructive pulmonary disease | http://purl.obolibrary.org/obo/MONDO_0005002 |
| T10 | 1168-1192 | Disease | denotes | bronchiolitis obliterans | http://purl.obolibrary.org/obo/MONDO_0015265 |
| T11 | 1464-1473 | Disease | denotes | emphysema | http://purl.obolibrary.org/obo/MONDO_0004849 |
| T12 | 1546-1560 | Disease | denotes | lung disorders | http://purl.obolibrary.org/obo/MONDO_0005275 |
GlyCosmos15-Glycan
| Id | Subject | Object | Predicate | Lexical cue | image |
|---|---|---|---|---|---|
| T1 | 665-676 | Glycan | denotes | chondroitin | https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT |
Anatomy-MAT
| Id | Subject | Object | Predicate | Lexical cue | mat_id |
|---|---|---|---|---|---|
| T1 | 62-66 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/MAT_0000135 |
| T2 | 1094-1098 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/MAT_0000135 |
| T3 | 1534-1538 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/MAT_0000135 |
| T4 | 1546-1550 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/MAT_0000135 |
HP-phenotype
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T1 | 1117-1123 | Phenotype | denotes | asthma | HP:0002099 |
| T2 | 1125-1162 | Phenotype | denotes | chronic obstructive pulmonary disease | HP:0006510 |
| T3 | 1168-1192 | Phenotype | denotes | bronchiolitis obliterans | HP:0011946 |
| T4 | 1464-1473 | Phenotype | denotes | emphysema | HP:0002097 |
Glycan-GlyCosmos
| Id | Subject | Object | Predicate | Lexical cue | image |
|---|---|---|---|---|---|
| T1 | 665-676 | Glycan | denotes | chondroitin | https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT |
GlyCosmos-GlycoEpitope
| Id | Subject | Object | Predicate | Lexical cue | glycoepitope_id |
|---|---|---|---|---|---|
| T1 | 665-676 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | chondroitin | http://www.glycoepitope.jp/epitopes/EP0081 |
GlyCosmos15-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T1 | 1117-1123 | Phenotype | denotes | asthma | HP:0002099 |
| T2 | 1125-1162 | Phenotype | denotes | chronic obstructive pulmonary disease | HP:0006510 |
| T3 | 1168-1192 | Phenotype | denotes | bronchiolitis obliterans | HP:0011946 |
| T4 | 1464-1473 | Phenotype | denotes | emphysema | HP:0002097 |
GlyCosmos15-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T1 | 29-35 | Body_part | denotes | tissue | http://purl.obolibrary.org/obo/UBERON_0000479 |
| T2 | 62-66 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
| T3 | 138-144 | Body_part | denotes | tissue | http://purl.obolibrary.org/obo/UBERON_0000479 |
| T4 | 447-453 | Body_part | denotes | tissue | http://purl.obolibrary.org/obo/UBERON_0000479 |
| T5 | 888-894 | Body_part | denotes | tissue | http://purl.obolibrary.org/obo/UBERON_0000479 |
| T6 | 1094-1098 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
| T7 | 1534-1538 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
| T8 | 1546-1550 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
GlyCosmos15-GlycoEpitope
| Id | Subject | Object | Predicate | Lexical cue | glycoepitope_id |
|---|---|---|---|---|---|
| T1 | 665-676 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | chondroitin | http://www.glycoepitope.jp/epitopes/EP0081 |
GlyCosmos15-Sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-77 | Sentence | denotes | Versican in inflammation and tissue remodeling: the impact on lung disorders. |
| T2 | 78-174 | Sentence | denotes | Versican is a proteoglycan that has many different roles in tissue homeostasis and inflammation. |
| T3 | 175-485 | Sentence | denotes | The biochemical structure comprises four different types of the core protein with attached glycosaminoglycans (GAGs) that can be sulfated to various extents and has the capacity to regulate differentiation of different cell types, migration, cell adhesion, proliferation, tissue stabilization and inflammation. |
| T4 | 486-606 | Sentence | denotes | Versican's regulatory properties are of importance during both homeostasis and changes that lead to disease progression. |
| T5 | 607-808 | Sentence | denotes | The GAGs that are attached to the core protein are of the chondroitin sulfate/dermatan sulfate type and are known to be important in inflammation through interactions with cytokines and growth factors. |
| T6 | 809-985 | Sentence | denotes | For a more complex understanding of versican, it is of importance to study the tissue niche, where the wound healing process in both healthy and diseased conditions take place. |
| T7 | 986-1309 | Sentence | denotes | In previous studies, our group has identified changes in the amount of the multifaceted versican in chronic lung disorders such as asthma, chronic obstructive pulmonary disease, and bronchiolitis obliterans syndrome, which could be a result of pathologic, transforming growth factor β driven, on-going remodeling processes. |
| T8 | 1310-1474 | Sentence | denotes | Reversely, the context of versican in its niche is of great importance since versican has been reported to have a beneficial role in other contexts, e.g. emphysema. |
| T9 | 1475-1561 | Sentence | denotes | Here we explore the vast mechanisms of versican in healthy lung and in lung disorders. |
GlyCosmos15-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T1 | 62-76 | Disease | denotes | lung disorders | MONDO:0005275 |
| T2 | 1094-1108 | Disease | denotes | lung disorders | MONDO:0005275 |
| T3 | 1117-1123 | Disease | denotes | asthma | MONDO:0004979 |
| T4 | 1125-1162 | Disease | denotes | chronic obstructive pulmonary disease | MONDO:0005002 |
| T5 | 1168-1201 | Disease | denotes | bronchiolitis obliterans syndrome | MONDO:0015265 |
| T6 | 1464-1473 | Disease | denotes | emphysema | MONDO:0004849 |
| T7 | 1546-1560 | Disease | denotes | lung disorders | MONDO:0005275 |
GlyCosmos15-FMA
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T1 | 29-35 | Body_part | denotes | tissue | FMA:9637 |
| T2 | 62-66 | Body_part | denotes | lung | FMA:7195 |
| T3 | 138-144 | Body_part | denotes | tissue | FMA:9637 |
| T4 | 447-453 | Body_part | denotes | tissue | FMA:9637 |
| T5 | 888-894 | Body_part | denotes | tissue | FMA:9637 |
| T6 | 1094-1098 | Body_part | denotes | lung | FMA:7195 |
| T7 | 1168-1181 | Body_part | denotes | bronchiolitis | FMA:76497 |
| T8 | 1534-1538 | Body_part | denotes | lung | FMA:7195 |
| T9 | 1546-1550 | Body_part | denotes | lung | FMA:7195 |
GlyCosmos15-MAT
| Id | Subject | Object | Predicate | Lexical cue | mat_id |
|---|---|---|---|---|---|
| T1 | 62-66 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/MAT_0000135 |
| T2 | 1094-1098 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/MAT_0000135 |
| T3 | 1534-1538 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/MAT_0000135 |
| T4 | 1546-1550 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/MAT_0000135 |
Anatomy-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T1 | 29-35 | Body_part | denotes | tissue | http://purl.obolibrary.org/obo/UBERON_0000479 |
| T2 | 62-66 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
| T3 | 138-144 | Body_part | denotes | tissue | http://purl.obolibrary.org/obo/UBERON_0000479 |
| T4 | 447-453 | Body_part | denotes | tissue | http://purl.obolibrary.org/obo/UBERON_0000479 |
| T5 | 888-894 | Body_part | denotes | tissue | http://purl.obolibrary.org/obo/UBERON_0000479 |
| T6 | 1094-1098 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
| T7 | 1534-1538 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
| T8 | 1546-1550 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |