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PubMed:25352573 / 122-444 JSONTXT

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sentences

Id Subject Object Predicate Lexical cue
TextSentencer_T2 0-322 Sentence denotes Escherichia coli O-antigen database (ECODAB) is a web-based application to support the collection of E. coli O-antigen structures, polymerase and flippase amino acid sequences, NMR chemical shift data of O-antigens as well as information on glycosyltransferases (GTs) involved in the assembly of O-antigen polysaccharides.
T2 0-322 Sentence denotes Escherichia coli O-antigen database (ECODAB) is a web-based application to support the collection of E. coli O-antigen structures, polymerase and flippase amino acid sequences, NMR chemical shift data of O-antigens as well as information on glycosyltransferases (GTs) involved in the assembly of O-antigen polysaccharides.
T2 0-322 Sentence denotes Escherichia coli O-antigen database (ECODAB) is a web-based application to support the collection of E. coli O-antigen structures, polymerase and flippase amino acid sequences, NMR chemical shift data of O-antigens as well as information on glycosyltransferases (GTs) involved in the assembly of O-antigen polysaccharides.

GlycoBiology-PACDB

Id Subject Object Predicate Lexical cue
_T17 0-16 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC002,LEC056,LEC062,LEC069,LEC081,LEC111,LEC133,LEC171,LEC177,LEC187,LEC211,LEC242,LEC252,LEC258,LEC259,LEC260,LEC262,LEC369,LEC377,LEC422,LEC442,LEC448,LEC450,LEC451,LEC454,LEC472,LEC492,LEC620 denotes Escherichia coli
_T18 0-18 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC629 denotes Escherichia coli O
_T19 0-18 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC295,LEC417 denotes Escherichia coli O
_T20 0-18 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC636 denotes Escherichia coli O
_T21 0-18 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC243,LEC640 denotes Escherichia coli O
_T22 0-18 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC324 denotes Escherichia coli O
_T23 0-18 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC754 denotes Escherichia coli O
_T24 0-18 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC774 denotes Escherichia coli O
_T25 0-18 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC263,LEC665 denotes Escherichia coli O
_T26 0-18 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC720 denotes Escherichia coli O
_T27 0-18 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC157,LEC407 denotes Escherichia coli O
_T28 0-18 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC244,LEC256,LEC354 denotes Escherichia coli O
_T29 0-18 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC487 denotes Escherichia coli O
_T30 0-18 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC054,LEC058,LEC073,LEC082,LEC091,LEC103,LEC109,LEC110,LEC123,LEC158,LEC179,LEC198,LEC205,LEC222,LEC223,LEC224,LEC225,LEC232,LEC298,LEC357,LEC378,LEC383,LEC388,LEC389,LEC397,LEC401,LEC410,LEC452 denotes Escherichia coli O
_T31 0-18 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC267,LEC475 denotes Escherichia coli O
_T32 0-18 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC328 denotes Escherichia coli O

GlycoBiology-FMA

Id Subject Object Predicate Lexical cue
_T5 155-165 FMAID:196728 denotes amino acid
_T6 155-165 FMAID:82739 denotes amino acid
_T7 306-321 FMAID:196779 denotes polysaccharides
_T8 306-321 FMAID:196735 denotes polysaccharides
_T9 306-321 FMAID:82785 denotes polysaccharides
_T10 306-321 FMAID:82746 denotes polysaccharides

GlycoBiology-NCBITAXON

Id Subject Object Predicate Lexical cue
T3 0-11 http://purl.bioontology.org/ontology/NCBITAXON/561 denotes Escherichia
T4 155-175 http://purl.bioontology.org/ontology/STY/T087 denotes amino acid sequences

GO-BP

Id Subject Object Predicate Lexical cue
T2 146-154 http://purl.obolibrary.org/obo/GO_0034203 denotes flippase
T3 146-154 http://purl.obolibrary.org/obo/GO_0045332 denotes flippase

EDAM-topics

Id Subject Object Predicate Lexical cue
T3 19-26 http://edamontology.org/topic_2830 denotes antigen
T4 27-35 http://edamontology.org/topic_3489 denotes database
T5 111-118 http://edamontology.org/topic_2830 denotes antigen
T6 155-165 http://edamontology.org/topic_0154 denotes amino acid
T7 166-175 http://edamontology.org/topic_3168 denotes sequences
T8 166-175 http://edamontology.org/topic_0080 denotes sequences
T9 177-180 http://edamontology.org/topic_0593 denotes NMR
T10 206-214 http://edamontology.org/topic_2830 denotes antigens
T11 284-292 http://edamontology.org/topic_0196 denotes assembly
T12 298-305 http://edamontology.org/topic_2830 denotes antigen

EDAM-DFO

Id Subject Object Predicate Lexical cue
T2 27-35 http://edamontology.org/data_0581 denotes database
T3 119-129 http://edamontology.org/data_0883 denotes structures
T4 166-175 http://edamontology.org/data_2044 denotes sequences
T5 166-175 http://edamontology.org/operation_3218 denotes sequences
T6 196-200 http://edamontology.org/data_0006 denotes data
T7 284-292 http://edamontology.org/operation_3433 denotes assembly

NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T2 0-16 OrganismTaxon denotes Escherichia coli 562
T3 101-108 OrganismTaxon denotes E. coli 562

Anatomy-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 50-53 Body_part denotes web http://purl.obolibrary.org/obo/UBERON_0006015