
PubMed:25298209
Annnotations
pqqtest_sentence
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
M_0 | 778-787 | cand:WTO:0000291-Helminthosporium Leaf Blight | denotes | Leaf Star |
M_1 | 778-787 | cand:WTO:0000276-Alternaria Leaf Blight | denotes | Leaf Star |
M_2 | 778-787 | cand:funRiceGene:31-leaf erectness | denotes | Leaf Star |
M_3 | 778-787 | cand:TO:0000977-leaf foliage rating | denotes | Leaf Star |
M_4 | 778-787 | cand:funRiceGene:48-leaf development | denotes | Leaf Star |
M_5 | 778-787 | cand:WTO:0000282-Ascochyta Leaf Spot | denotes | Leaf Star |
M_6 | 778-787 | cand:PO:0020040-leaf base | denotes | Leaf Star |
M_7 | 778-787 | cand:funRiceGene:402-leaf shape | denotes | Leaf Star |
M_8 | 778-787 | cand:TO:0002637-leaf size | denotes | Leaf Star |
M_9 | 778-787 | cand:PO:0025142-leaf tip | denotes | Leaf Star |
M_10 | 778-787 | cand:PO:0020104-leaf sheath | denotes | Leaf Star |
M_11 | 858-864 | GeneID:RAPID:Os02g0187800MSUID:LOC_Os02g09490GraID:GR:0060366 | denotes | OsCAD2 |
T75635 | 10-17 | funRiceGene:304 | denotes | lodging |
T45226 | 309-316 | funRiceGene:304 | denotes | lodging |
T68742 | 584-591 | funRiceGene:304 | denotes | lodging |
T25263 | 1195-1202 | funRiceGene:304 | denotes | lodging |
T42066 | 966-977 | xzyao:29840 | denotes | thick culms |
T18596 | 18-28 | funRiceGene:228 | denotes | resistance |
T95639 | 317-327 | funRiceGene:228 | denotes | resistance |
T95659 | 592-602 | funRiceGene:228 | denotes | resistance |
T74848 | 1203-1213 | funRiceGene:228 | denotes | resistance |
T58677 | 37-41 | funRiceGene:86 | denotes | culm |
T79960 | 543-547 | funRiceGene:86 | denotes | culm |
T69806 | 933-937 | funRiceGene:86 | denotes | culm |
M_12 | 1268-1272 | funRiceGene:86 | denotes | culm |
M_13 | 262-275 | xzyao:23177 | denotes | lignin levels |
M_14 | 0-28 | xzyao:32520 | denotes | Increased lodging resistance |
M_15 | 612-621 | WTO:0000005 | denotes | phenotype |
M_16 | 558-562 | PO:0025034, funRiceGene:469 | denotes | Leaf |
M_17 | 683-687 | PO:0025034, funRiceGene:469 | denotes | Leaf |
M_18 | 778-782 | PO:0025034, funRiceGene:469 | denotes | Leaf |
M_19 | 47-53 | funRiceGene:138 | denotes | lignin |
M_20 | 107-113 | funRiceGene:138 | denotes | Lignin |
M_21 | 262-268 | funRiceGene:138 | denotes | lignin |
M_22 | 402-408 | funRiceGene:138 | denotes | lignin |
M_23 | 807-813 | funRiceGene:138 | denotes | lignin |
M_24 | 1290-1296 | funRiceGene:138 | denotes | lignin |
M_25 | 502-515 | funRiceGene:288 | denotes | dehydrogenase |
M_26 | 333-354 | xzyao:5290 | denotes | rice mutant gold hull |
M_27 | 10-28 | WTO:0000092, funRiceGene:179, xzyao:34595 | denotes | lodging resistance |
M_28 | 309-327 | WTO:0000092, funRiceGene:179, xzyao:34595 | denotes | lodging resistance |
M_29 | 584-602 | WTO:0000092, funRiceGene:179, xzyao:34595 | denotes | lodging resistance |
M_30 | 1195-1213 | WTO:0000092, funRiceGene:179, xzyao:34595 | denotes | lodging resistance |
M_31 | 345-354 | xzyao:41590 | denotes | gold hull |
M_32 | 558-567 | xzyao:25721 | denotes | Leaf Star |
M_33 | 683-692 | xzyao:25721 | denotes | Leaf Star |
M_34 | 778-787 | xzyao:25721 | denotes | Leaf Star |
M_35 | 1079-1089 | xzyao:3338 | denotes | cell walls |
M_36 | 138-146 | funRiceGene:189 | denotes | breeding |
M_37 | 402-418 | hunflair:NA:Disease | denotes | lignin deficient |
M_38 | 485-515 | hunflair:NA:Gene | denotes | cinnamyl-alcohol dehydrogenase |
M_39 | 517-520 | hunflair:NA:Gene | denotes | CAD |
M_40 | 672-679 | hunflair:NA:Gene | denotes | gh loci |
M_41 | 359-369 | hunflair:NA:Gene | denotes | internode2 |
M_42 | 766-776 | hunflair:NA:Gene | denotes | gh2 mutant |
M_43 | 485-501 | hunflair:NA:Chemical | denotes | cinnamyl-alcohol |
M_44 | 58-62 | hunflair:NA:Species | denotes | rice |
M_45 | 333-337 | hunflair:NA:Species | denotes | rice |
M_46 | 1116-1120 | hunflair:NA:Species | denotes | rice |
M_47 | 858-864 | hunflair:NA:Gene | denotes | OsCAD2 |
M_48 | 54-57 | hunflair:NA:Gene | denotes | gh2 |
M_49 | 371-374 | hunflair:NA:Gene | denotes | gh2 |
M_50 | 766-769 | hunflair:NA:Gene | denotes | gh2 |
M_51 | 1345-1348 | hunflair:NA:Gene | denotes | gh2 |
M_52 | 420-423 | hunflair:NA:Gene | denotes | GH2 |
M_53 | 58-62 | pubtator:4530:Species | denotes | rice |
M_54 | 333-337 | pubtator:4530:Species | denotes | rice |
M_55 | 1116-1120 | pubtator:4530:Species | denotes | rice |
M_56 | 485-501 | pubtator:MESH:C020722:Chemical | denotes | cinnamyl-alcohol |
21k_plant_trait_mention
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
M_0 | 138-146 | funRiceGene:189 | denotes | breeding |
M_1 | 612-621 | WTO:0000005 | denotes | phenotype |
M_2 | 683-687 | PO:0025034, funRiceGene:469 | denotes | Leaf |
M_3 | 778-782 | PO:0025034, funRiceGene:469 | denotes | Leaf |
M_4 | 502-515 | funRiceGene:288 | denotes | dehydrogenase |
M_5 | 584-602 | WTO:0000092, funRiceGene:179, xzyao:9867 | denotes | lodging resistance |
M_6 | 107-113 | funRiceGene:138 | denotes | Lignin |
M_7 | 262-268 | funRiceGene:138 | denotes | lignin |
M_8 | 402-408 | funRiceGene:138 | denotes | lignin |
M_9 | 807-813 | funRiceGene:138 | denotes | lignin |
M_10 | 1290-1296 | funRiceGene:138 | denotes | lignin |
M_11 | 933-937 | funRiceGene:86 | denotes | culm |
M_12 | 1268-1272 | funRiceGene:86 | denotes | culm |
M_13 | 584-602 | xzyao:3708 | denotes | lodging resistance |
M_14 | 592-602 | funRiceGene:228 | denotes | resistance |
M_15 | 309-316 | funRiceGene:304 | denotes | lodging |
M_16 | 584-591 | funRiceGene:304 | denotes | lodging |
M_17 | 1195-1202 | funRiceGene:304 | denotes | lodging |
M_18 | 1262-1272 | xzyao:8843 | denotes | stiff culm |
M_19 | 485-515 | hunflair:NA:Gene | denotes | cinnamyl-alcohol dehydrogenase |
M_20 | 485-501 | hunflair:NA:Chemical | denotes | cinnamyl-alcohol |
M_21 | 766-776 | hunflair:NA:Gene | denotes | gh2 mutant |
M_22 | 517-520 | hunflair:NA:Gene | denotes | CAD |
M_23 | 58-62 | hunflair:NA:Species | denotes | rice |
M_24 | 333-337 | hunflair:NA:Species | denotes | rice |
M_25 | 1116-1120 | hunflair:NA:Species | denotes | rice |
M_26 | 672-679 | hunflair:NA:Gene | denotes | gh loci |
M_27 | 858-864 | hunflair:NA:Gene | denotes | OsCAD2 |
M_28 | 359-369 | hunflair:NA:Gene | denotes | internode2 |
M_29 | 420-423 | hunflair:NA:Gene | denotes | GH2 |
M_30 | 402-418 | hunflair:NA:Disease | denotes | lignin deficient |
M_31 | 54-57 | hunflair:NA:Gene | denotes | gh2 |
M_32 | 371-374 | hunflair:NA:Gene | denotes | gh2 |
M_33 | 766-769 | hunflair:NA:Gene | denotes | gh2 |
M_34 | 1345-1348 | hunflair:NA:Gene | denotes | gh2 |
M_35 | 58-62 | pubtator:4530:Species | denotes | rice |
M_36 | 333-337 | pubtator:4530:Species | denotes | rice |
M_37 | 1116-1120 | pubtator:4530:Species | denotes | rice |
M_38 | 485-501 | pubtator:MESH:C020722:Chemical | denotes | cinnamyl-alcohol |
OryzaGP_2021_v2
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 54-57 | http://identifiers.org/oryzabase.gene/507 | denotes | gh2 |
T2 | 371-374 | http://identifiers.org/oryzabase.gene/507 | denotes | gh2 |
T3 | 420-423 | http://identifiers.org/oryzabase.gene/507 | denotes | GH2 |
T4 | 517-520 | http://identifiers.org/oryzabase.gene/507 | denotes | CAD |
T5 | 517-520 | http://identifiers.org/oryzabase.gene/23752 | denotes | CAD |
T6 | 517-520 | http://identifiers.org/oryzabase.gene/23490 | denotes | CAD |
T7 | 766-769 | http://identifiers.org/oryzabase.gene/507 | denotes | gh2 |
T8 | 858-864 | http://identifiers.org/oryzabase.gene/507 | denotes | OsCAD2 |
T9 | 1345-1348 | http://identifiers.org/oryzabase.gene/507 | denotes | gh2 |
T19244 | 54-57 | http://identifiers.org/rapdb.locus/Os02g0187800 | denotes | gh2 |
T37428 | 371-374 | http://identifiers.org/rapdb.locus/Os02g0187800 | denotes | gh2 |
T39605 | 420-423 | http://identifiers.org/rapdb.locus/Os02g0187800 | denotes | GH2 |
T5340 | 517-520 | http://identifiers.org/rapdb.locus/Os03g0101600 | denotes | CAD |
T13379 | 517-520 | http://identifiers.org/rapdb.locus/Os02g0458100 | denotes | CAD |
T65492 | 517-520 | http://identifiers.org/rapdb.locus/Os02g0187800 | denotes | CAD |
T22205 | 766-769 | http://identifiers.org/rapdb.locus/Os02g0187800 | denotes | gh2 |
T80116 | 858-864 | http://identifiers.org/rapdb.locus/Os02g0187800 | denotes | OsCAD2 |
T97491 | 1345-1348 | http://identifiers.org/rapdb.locus/Os02g0187800 | denotes | gh2 |
OryzaGP_2021_FLAIR
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
M_0 | 54-57 | hunflair:NA:Gene | denotes | gh2 |
M_1 | 371-374 | hunflair:NA:Gene | denotes | gh2 |
M_2 | 766-769 | hunflair:NA:Gene | denotes | gh2 |
M_3 | 1345-1348 | hunflair:NA:Gene | denotes | gh2 |
M_4 | 359-369 | hunflair:NA:Gene | denotes | internode2 |
M_5 | 766-776 | hunflair:NA:Gene | denotes | gh2 mutant |
M_6 | 517-520 | hunflair:NA:Gene | denotes | CAD |
M_7 | 58-62 | hunflair:NA:Species | denotes | rice |
M_8 | 333-337 | hunflair:NA:Species | denotes | rice |
M_9 | 1116-1120 | hunflair:NA:Species | denotes | rice |
M_10 | 858-864 | hunflair:NA:Gene | denotes | OsCAD2 |
M_11 | 402-418 | hunflair:NA:Disease | denotes | lignin deficient |
M_12 | 485-501 | hunflair:NA:Chemical | denotes | cinnamyl-alcohol |
M_13 | 420-423 | hunflair:NA:Gene | denotes | GH2 |
M_14 | 485-515 | hunflair:NA:Gene | denotes | cinnamyl-alcohol dehydrogenase |
M_15 | 672-679 | hunflair:NA:Gene | denotes | gh loci |
OryzaGP_2021
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 54-57 | http://identifiers.org/oryzabase.gene/507 | denotes | gh2 |
T2 | 345-369 | http://identifiers.org/oryzabase.gene/507 | denotes | gold hull and internode2 |
T3 | 371-374 | http://identifiers.org/oryzabase.gene/507 | denotes | gh2 |
T4 | 420-423 | http://identifiers.org/oryzabase.gene/507 | denotes | GH2 |
T5 | 485-515 | http://identifiers.org/oryzabase.gene/507 | denotes | cinnamyl-alcohol dehydrogenase |
T6 | 517-520 | http://identifiers.org/oryzabase.gene/507 | denotes | CAD |
T7 | 517-520 | http://identifiers.org/oryzabase.gene/23752 | denotes | CAD |
T8 | 517-520 | http://identifiers.org/oryzabase.gene/23490 | denotes | CAD |
T9 | 766-769 | http://identifiers.org/oryzabase.gene/507 | denotes | gh2 |
T10 | 858-864 | http://identifiers.org/oryzabase.gene/507 | denotes | OsCAD2 |
T11 | 1345-1348 | http://identifiers.org/oryzabase.gene/507 | denotes | gh2 |
T32210 | 54-57 | http://identifiers.org/ricegap/LOC_Os02g09490 | denotes | gh2 |
T55391 | 345-369 | http://identifiers.org/ricegap/LOC_Os02g09490 | denotes | gold hull and internode2 |
T31051 | 371-374 | http://identifiers.org/ricegap/LOC_Os02g09490 | denotes | gh2 |
T57623 | 420-423 | http://identifiers.org/ricegap/LOC_Os02g09490 | denotes | GH2 |
T36253 | 485-515 | http://identifiers.org/ricegap/LOC_Os02g09490 | denotes | cinnamyl-alcohol dehydrogenase |
T25957 | 517-520 | http://identifiers.org/ricegap/LOC_Os03g01190 | denotes | CAD |
T49043 | 517-520 | http://identifiers.org/ricegap/LOC_Os02g26014 | denotes | CAD |
T59380 | 517-520 | http://identifiers.org/ricegap/LOC_Os02g09490 | denotes | CAD |
T25530 | 766-769 | http://identifiers.org/ricegap/LOC_Os02g09490 | denotes | gh2 |
T98984 | 858-864 | http://identifiers.org/ricegap/LOC_Os02g09490 | denotes | OsCAD2 |
T5800 | 1345-1348 | http://identifiers.org/ricegap/LOC_Os02g09490 | denotes | gh2 |
T9070 | 54-57 | http://identifiers.org/rapdb.locus/Os02g0187800 | denotes | gh2 |
T14663 | 345-369 | http://identifiers.org/rapdb.locus/Os02g0187800 | denotes | gold hull and internode2 |
T95893 | 371-374 | http://identifiers.org/rapdb.locus/Os02g0187800 | denotes | gh2 |
T68779 | 420-423 | http://identifiers.org/rapdb.locus/Os02g0187800 | denotes | GH2 |
T29410 | 485-515 | http://identifiers.org/rapdb.locus/Os02g0187800 | denotes | cinnamyl-alcohol dehydrogenase |
T76878 | 517-520 | http://identifiers.org/rapdb.locus/Os03g0101600 | denotes | CAD |
T97526 | 517-520 | http://identifiers.org/rapdb.locus/Os02g0458100 | denotes | CAD |
T36290 | 517-520 | http://identifiers.org/rapdb.locus/Os02g0187800 | denotes | CAD |
T22176 | 766-769 | http://identifiers.org/rapdb.locus/Os02g0187800 | denotes | gh2 |
T82167 | 858-864 | http://identifiers.org/rapdb.locus/Os02g0187800 | denotes | OsCAD2 |
T78594 | 1345-1348 | http://identifiers.org/rapdb.locus/Os02g0187800 | denotes | gh2 |
T34757 | 54-57 | http://identifiers.org/uniprot/Q6ZHS4 | denotes | gh2 |
T94260 | 54-57 | http://identifiers.org/uniprot/Q38G74 | denotes | gh2 |
T11760 | 345-369 | http://identifiers.org/uniprot/Q6ZHS4 | denotes | gold hull and internode2 |
T19684 | 345-369 | http://identifiers.org/uniprot/Q38G74 | denotes | gold hull and internode2 |
T76191 | 371-374 | http://identifiers.org/uniprot/Q6ZHS4 | denotes | gh2 |
T90413 | 371-374 | http://identifiers.org/uniprot/Q38G74 | denotes | gh2 |
T56184 | 420-423 | http://identifiers.org/uniprot/Q6ZHS4 | denotes | GH2 |
T1153 | 420-423 | http://identifiers.org/uniprot/Q38G74 | denotes | GH2 |
T27201 | 485-515 | http://identifiers.org/uniprot/Q6ZHS4 | denotes | cinnamyl-alcohol dehydrogenase |
T63573 | 485-515 | http://identifiers.org/uniprot/Q38G74 | denotes | cinnamyl-alcohol dehydrogenase |
T18042 | 517-520 | http://identifiers.org/uniprot/Q6ZHS4 | denotes | CAD |
T12 | 517-520 | http://identifiers.org/uniprot/Q38G74 | denotes | CAD |
T13 | 517-520 | http://identifiers.org/uniprot/Q10T48 | denotes | CAD |
T14 | 517-520 | http://identifiers.org/uniprot/A0EVJ1 | denotes | CAD |
T15 | 766-769 | http://identifiers.org/uniprot/Q6ZHS4 | denotes | gh2 |
T16 | 766-769 | http://identifiers.org/uniprot/Q38G74 | denotes | gh2 |
T17 | 858-864 | http://identifiers.org/uniprot/Q6ZHS4 | denotes | OsCAD2 |
T18 | 858-864 | http://identifiers.org/uniprot/Q38G74 | denotes | OsCAD2 |
T19 | 1345-1348 | http://identifiers.org/uniprot/Q6ZHS4 | denotes | gh2 |
T20 | 1345-1348 | http://identifiers.org/uniprot/Q38G74 | denotes | gh2 |
M_0 | 54-57 | hunflair:NA:Gene | denotes | gh2 |
M_1 | 371-374 | hunflair:NA:Gene | denotes | gh2 |
M_2 | 766-769 | hunflair:NA:Gene | denotes | gh2 |
M_3 | 1345-1348 | hunflair:NA:Gene | denotes | gh2 |
M_4 | 359-369 | hunflair:NA:Gene | denotes | internode2 |
M_5 | 766-776 | hunflair:NA:Gene | denotes | gh2 mutant |
M_6 | 517-520 | hunflair:NA:Gene | denotes | CAD |
M_7 | 58-62 | hunflair:NA:Species | denotes | rice |
M_8 | 333-337 | hunflair:NA:Species | denotes | rice |
M_9 | 1116-1120 | hunflair:NA:Species | denotes | rice |
M_10 | 858-864 | hunflair:NA:Gene | denotes | OsCAD2 |
M_11 | 402-418 | hunflair:NA:Disease | denotes | lignin deficient |
M_12 | 485-501 | hunflair:NA:Chemical | denotes | cinnamyl-alcohol |
M_13 | 420-423 | hunflair:NA:Gene | denotes | GH2 |
M_14 | 485-515 | hunflair:NA:Gene | denotes | cinnamyl-alcohol dehydrogenase |
M_15 | 672-679 | hunflair:NA:Gene | denotes | gh loci |
PubmedHPO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 447-456 | HP_0009824 | denotes | short arm |
funRiceGenes-all
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
PTO-all_T1 | 210-226 | http://purl.obolibrary.org/obo/TO_0000388 | denotes | yields in forage |
PTO-all_T2 | 933-946 | http://purl.obolibrary.org/obo/TO_0000051 | denotes | culm strength |
funRiceGenes-exact
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
PTO-exact_T1 | 210-226 | http://purl.obolibrary.org/obo/TO_0000388 | denotes | yields in forage |
OryzaGP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 54-57 | gene | denotes | gh2 |
T2 | 420-423 | gene | denotes | GH2 |
T3 | 485-515 | gene | denotes | cinnamyl-alcohol dehydrogenase |
T4 | 1345-1348 | gene | denotes | gh2 |
mondo_disease
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T1 | 517-520 | Disease | denotes | CAD | http://purl.obolibrary.org/obo/MONDO_0005010|http://purl.obolibrary.org/obo/MONDO_0018922 |
HP-phenotype
Id | Subject | Object | Predicate | Lexical cue | hp_id |
---|---|---|---|---|---|
T1 | 447-456 | Phenotype | denotes | short arm | HP:0009824 |
Oryza_sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 0-106 | Sentence | denotes | Increased lodging resistance in long-culm, low-lignin gh2 rice for improved feed and bioenergy production. |
T2 | 107-328 | Sentence | denotes | Lignin modification has been a breeding target for the improvements of forage digestibility and energy yields in forage and bioenergy crops, but decreased lignin levels are often accompanied by reduced lodging resistance. |
T3 | 329-419 | Sentence | denotes | The rice mutant gold hull and internode2 (gh2) has been identified to be lignin deficient. |
T4 | 420-522 | Sentence | denotes | GH2 has been mapped to the short arm of chromosome 2 and encodes cinnamyl-alcohol dehydrogenase (CAD). |
T5 | 523-667 | Sentence | denotes | We developed a long-culm variety, 'Leaf Star', with superior lodging resistance and a gh phenotype similar to one of its parents, 'Chugoku 117'. |
T6 | 668-777 | Sentence | denotes | The gh loci in Leaf Star and Chugoku 117 were localized to the same region of chromosome 2 as the gh2 mutant. |
T7 | 778-901 | Sentence | denotes | Leaf Star had culms with low lignin concentrations due to a natural mutation in OsCAD2 that was not present in Chugoku 117. |
T8 | 902-978 | Sentence | denotes | However, this variety had high culm strength due to its strong, thick culms. |
T9 | 979-1090 | Sentence | denotes | Additionally, this variety had a thick layer of cortical fiber tissue with well-developed secondary cell walls. |
T10 | 1091-1357 | Sentence | denotes | Our results suggest that rice can be improved for forage and bioenergy production by combining superior lodging resistance, which can be obtained by introducing thick and stiff culm traits, with low lignin concentrations, which can be obtained using the gh2 variety. |
Oryza_sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 0-106 | Sentence | denotes | Increased lodging resistance in long-culm, low-lignin gh2 rice for improved feed and bioenergy production. |
T2 | 107-328 | Sentence | denotes | Lignin modification has been a breeding target for the improvements of forage digestibility and energy yields in forage and bioenergy crops, but decreased lignin levels are often accompanied by reduced lodging resistance. |
T3 | 329-419 | Sentence | denotes | The rice mutant gold hull and internode2 (gh2) has been identified to be lignin deficient. |
T4 | 420-522 | Sentence | denotes | GH2 has been mapped to the short arm of chromosome 2 and encodes cinnamyl-alcohol dehydrogenase (CAD). |
T5 | 523-667 | Sentence | denotes | We developed a long-culm variety, 'Leaf Star', with superior lodging resistance and a gh phenotype similar to one of its parents, 'Chugoku 117'. |
T6 | 668-777 | Sentence | denotes | The gh loci in Leaf Star and Chugoku 117 were localized to the same region of chromosome 2 as the gh2 mutant. |
T7 | 778-901 | Sentence | denotes | Leaf Star had culms with low lignin concentrations due to a natural mutation in OsCAD2 that was not present in Chugoku 117. |
T8 | 902-978 | Sentence | denotes | However, this variety had high culm strength due to its strong, thick culms. |
T9 | 979-1090 | Sentence | denotes | Additionally, this variety had a thick layer of cortical fiber tissue with well-developed secondary cell walls. |
T10 | 1091-1357 | Sentence | denotes | Our results suggest that rice can be improved for forage and bioenergy production by combining superior lodging resistance, which can be obtained by introducing thick and stiff culm traits, with low lignin concentrations, which can be obtained using the gh2 variety. |
Oryza_sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 0-106 | Sentence | denotes | Increased lodging resistance in long-culm, low-lignin gh2 rice for improved feed and bioenergy production. |
T2 | 107-328 | Sentence | denotes | Lignin modification has been a breeding target for the improvements of forage digestibility and energy yields in forage and bioenergy crops, but decreased lignin levels are often accompanied by reduced lodging resistance. |
T3 | 329-419 | Sentence | denotes | The rice mutant gold hull and internode2 (gh2) has been identified to be lignin deficient. |
T4 | 420-522 | Sentence | denotes | GH2 has been mapped to the short arm of chromosome 2 and encodes cinnamyl-alcohol dehydrogenase (CAD). |
T5 | 523-667 | Sentence | denotes | We developed a long-culm variety, 'Leaf Star', with superior lodging resistance and a gh phenotype similar to one of its parents, 'Chugoku 117'. |
T6 | 668-777 | Sentence | denotes | The gh loci in Leaf Star and Chugoku 117 were localized to the same region of chromosome 2 as the gh2 mutant. |
T7 | 778-901 | Sentence | denotes | Leaf Star had culms with low lignin concentrations due to a natural mutation in OsCAD2 that was not present in Chugoku 117. |
T8 | 902-978 | Sentence | denotes | However, this variety had high culm strength due to its strong, thick culms. |
T9 | 979-1090 | Sentence | denotes | Additionally, this variety had a thick layer of cortical fiber tissue with well-developed secondary cell walls. |
T10 | 1091-1357 | Sentence | denotes | Our results suggest that rice can be improved for forage and bioenergy production by combining superior lodging resistance, which can be obtained by introducing thick and stiff culm traits, with low lignin concentrations, which can be obtained using the gh2 variety. |
Oryza_sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 0-106 | Sentence | denotes | Increased lodging resistance in long-culm, low-lignin gh2 rice for improved feed and bioenergy production. |
T2 | 107-328 | Sentence | denotes | Lignin modification has been a breeding target for the improvements of forage digestibility and energy yields in forage and bioenergy crops, but decreased lignin levels are often accompanied by reduced lodging resistance. |
T3 | 329-419 | Sentence | denotes | The rice mutant gold hull and internode2 (gh2) has been identified to be lignin deficient. |
T4 | 420-522 | Sentence | denotes | GH2 has been mapped to the short arm of chromosome 2 and encodes cinnamyl-alcohol dehydrogenase (CAD). |
T5 | 523-667 | Sentence | denotes | We developed a long-culm variety, 'Leaf Star', with superior lodging resistance and a gh phenotype similar to one of its parents, 'Chugoku 117'. |
T6 | 668-777 | Sentence | denotes | The gh loci in Leaf Star and Chugoku 117 were localized to the same region of chromosome 2 as the gh2 mutant. |
T7 | 778-901 | Sentence | denotes | Leaf Star had culms with low lignin concentrations due to a natural mutation in OsCAD2 that was not present in Chugoku 117. |
T8 | 902-978 | Sentence | denotes | However, this variety had high culm strength due to its strong, thick culms. |
T9 | 979-1090 | Sentence | denotes | Additionally, this variety had a thick layer of cortical fiber tissue with well-developed secondary cell walls. |
T10 | 1091-1357 | Sentence | denotes | Our results suggest that rice can be improved for forage and bioenergy production by combining superior lodging resistance, which can be obtained by introducing thick and stiff culm traits, with low lignin concentrations, which can be obtained using the gh2 variety. |
NCBITAXON
Id | Subject | Object | Predicate | Lexical cue | db_id |
---|---|---|---|---|---|
T1 | 58-62 | OrganismTaxon | denotes | rice | 4530 |
T2 | 333-337 | OrganismTaxon | denotes | rice | 4530 |
T3 | 1116-1120 | OrganismTaxon | denotes | rice | 4530 |
Anatomy-UBERON
Id | Subject | Object | Predicate | Lexical cue | uberon_id |
---|---|---|---|---|---|
T1 | 453-456 | Body_part | denotes | arm | http://purl.obolibrary.org/obo/UBERON_0001460|http://purl.obolibrary.org/obo/UBERON_0003822 |
T3 | 460-470 | Body_part | denotes | chromosome | http://purl.obolibrary.org/obo/GO_0005694 |
T4 | 746-756 | Body_part | denotes | chromosome | http://purl.obolibrary.org/obo/GO_0005694 |
T5 | 1018-1023 | Body_part | denotes | layer | http://purl.obolibrary.org/obo/UBERON_0000119|http://purl.obolibrary.org/obo/UBERON_0022303 |
T7 | 1042-1048 | Body_part | denotes | tissue | http://purl.obolibrary.org/obo/UBERON_0000479 |