> top > docs > PubMed:25192280 > annotations

PubMed:25192280 JSONTXT

Annnotations TAB JSON ListView MergeView

OryzaGP_2021

Id Subject Object Predicate Lexical cue
T1 136-138 http://identifiers.org/oryzabase.gene/645 denotes ER
T2 304-307 http://identifiers.org/oryzabase.gene/23496 denotes act
T3 571-592 http://identifiers.org/oryzabase.gene/6821 denotes temperature sensitive
T4 617-621 http://identifiers.org/oryzabase.gene/20863 denotes TGMS
T5 648-652 http://identifiers.org/oryzabase.gene/382 denotes tms2
T6 648-652 http://identifiers.org/oryzabase.gene/2113 denotes tms2
T7 799-803 http://identifiers.org/oryzabase.gene/382 denotes tms2
T8 799-803 http://identifiers.org/oryzabase.gene/2113 denotes tms2
T9 1592-1596 http://identifiers.org/oryzabase.gene/382 denotes tms2
T10 1592-1596 http://identifiers.org/oryzabase.gene/2113 denotes tms2
T15193 304-307 http://identifiers.org/ricegap/LOC_Os03g47860 denotes act
T90926 304-307 http://identifiers.org/rapdb.locus/Os03g0682900 denotes act
M_0 1630-1634 hunflair:NA:Gene denotes ORMs
M_1 273-279 hunflair:NA:Disease denotes asthma
M_2 0-4 hunflair:NA:Species denotes Rice
M_3 208-214 hunflair:NA:Species denotes humans
M_4 127-130 hunflair:NA:Gene denotes ORM
M_5 173-176 hunflair:NA:Gene denotes ORM
M_6 188-191 hunflair:NA:Gene denotes ORM
M_7 291-294 hunflair:NA:Gene denotes ORM
M_8 492-495 hunflair:NA:Gene denotes ORM
M_9 511-517 hunflair:NA:Species denotes plants
M_10 921-927 hunflair:NA:Species denotes plants
M_11 1192-1198 hunflair:NA:Species denotes plants
M_12 1310-1316 hunflair:NA:Species denotes plants
M_13 623-627 hunflair:NA:Species denotes rice
M_14 1140-1144 hunflair:NA:Species denotes rice
M_15 1187-1191 hunflair:NA:Species denotes rice
M_16 1270-1274 hunflair:NA:Species denotes rice
M_17 1032-1046 hunflair:NA:Gene denotes LOC_Os07g26940
M_18 1218-1232 hunflair:NA:Gene denotes LOC_Os07g26940
M_19 1347-1361 hunflair:NA:Gene denotes LOC_Os07g26940
M_20 5-10 hunflair:NA:Gene denotes ORMDL
M_21 181-186 hunflair:NA:Gene denotes ORMDL
M_22 496-501 hunflair:NA:Gene denotes ORMDL
M_23 765-770 hunflair:NA:Gene denotes ORMDL
M_24 1020-1025 hunflair:NA:Gene denotes ORMDL
M_25 1145-1150 hunflair:NA:Gene denotes ORMDL
M_26 1247-1252 hunflair:NA:Gene denotes ORMDL
M_27 1381-1386 hunflair:NA:Gene denotes ORMDL
M_28 1678-1683 hunflair:NA:Gene denotes ORMDL
M_29 20-32 hunflair:NA:Chemical denotes sphingolipid
M_30 334-346 hunflair:NA:Chemical denotes sphingolipid
M_31 1487-1499 hunflair:NA:Chemical denotes sphingolipid
M_32 1547-1559 hunflair:NA:Chemical denotes sphingolipid
M_33 1703-1715 hunflair:NA:Chemical denotes sphingolipid
M_34 648-652 hunflair:NA:Gene denotes tms2
M_35 799-803 hunflair:NA:Gene denotes tms2
M_36 1592-1596 hunflair:NA:Gene denotes tms2
M_37 216-222 hunflair:NA:Gene denotes ORMDL3
M_38 358-371 hunflair:NA:Chemical denotes Sphingolipids
M_39 284-289 hunflair:NA:Species denotes yeast
M_40 1638-1643 hunflair:NA:Species denotes yeast

pqqtest_sentence

Id Subject Object Predicate Lexical cue
M_0 0-10 cand:TO:0000147-rice hoja blanca disease resistance denotes Rice ORMDL
M_1 0-10 cand:TO:0000246-rice delphacid resistance denotes Rice ORMDL
M_2 0-10 cand:TO:0000138-brown rice protein denotes Rice ORMDL
M_3 0-10 cand:TO:0000204-rice seedling blight disease resistance denotes Rice ORMDL
M_4 0-10 cand:TO:0000410-polished rice protein content denotes Rice ORMDL
M_5 0-10 cand:PECO:0007358-rice grassy stunt virus exposure denotes Rice ORMDL
M_6 0-10 cand:PO:0000282-trichome denotes Rice ORMDL
M_7 0-10 cand:PO:0005046-periderm denotes Rice ORMDL
M_8 0-10 cand:PPO:0001045-ripe fruit denotes Rice ORMDL
M_9 0-10 cand:PO:0004530-tile cell denotes Rice ORMDL
M_10 0-10 cand:PO:0025355-corm denotes Rice ORMDL
M_11 1487-1510 cand:funRiceGene:225-fatty acid biosynthesis denotes sphingolipid metabolism
M_12 1487-1510 cand:funRiceGene:15-flavonoid metabolism denotes sphingolipid metabolism
M_13 1487-1510 cand:funRiceGene:76-phosphate starvation signaling denotes sphingolipid metabolism
M_14 1487-1510 cand:funRiceGene:161-melatonin biosynthesis denotes sphingolipid metabolism
M_15 1487-1510 cand:funRiceGene:236-biosynthesis of phytoalexins denotes sphingolipid metabolism
M_16 1487-1510 cand:funRiceGene:58-tyrosine biosynthesis denotes sphingolipid metabolism
M_17 1487-1510 cand:funRiceGene:300-BR catabolism denotes sphingolipid metabolism
M_18 1487-1510 cand:funRiceGene:69-ABA catabolism denotes sphingolipid metabolism
M_19 1487-1510 cand:TO:0000322-phenotypic acceptability denotes sphingolipid metabolism
M_20 1487-1510 cand:PO:0025613-spine petiole denotes sphingolipid metabolism
M_21 291-303 cand:TO:0000710-globulin protein content denotes ORM proteins
M_22 291-303 cand:funRiceGene:211-protein phosphatase denotes ORM proteins
M_23 291-303 cand:TO:0000610-soluble to total protein ratio denotes ORM proteins
M_24 291-303 cand:funRiceGene:129-protein kinase denotes ORM proteins
M_25 291-303 cand:funRiceGene:309-actin protein denotes ORM proteins
M_26 291-303 cand:TO:0000325-soluble protein content denotes ORM proteins
M_27 291-303 cand:funRiceGene:65-R protein denotes ORM proteins
M_28 291-303 cand:funRiceGene:26-grain protein denotes ORM proteins
M_29 291-303 cand:WTO:0000109-soil property denotes ORM proteins
M_30 291-303 cand:WTO:0000083-food property denotes ORM proteins
M_31 20-44 cand:funRiceGene:41-BR homeostasis denotes sphingolipid homeostasis
M_32 20-44 cand:funRiceGene:159-phosphate homeostasis denotes sphingolipid homeostasis
M_33 20-44 cand:funRiceGene:174-redox homeostasis denotes sphingolipid homeostasis
M_34 20-44 cand:funRiceGene:76-phosphate starvation signaling denotes sphingolipid homeostasis
M_35 20-44 cand:funRiceGene:54-Pi homeostasis denotes sphingolipid homeostasis
M_36 20-44 cand:funRiceGene:225-fatty acid biosynthesis denotes sphingolipid homeostasis
M_37 20-44 cand:funRiceGene:311-iron homeostasis denotes sphingolipid homeostasis
M_38 20-44 cand:funRiceGene:301-ethylene homeostasis denotes sphingolipid homeostasis
M_39 1414-1440 cand:funRiceGene:157-pollen development denotes abnormal pollen morphology
M_40 1414-1440 cand:funRiceGene:74-pollen wall morphogenesis denotes abnormal pollen morphology
M_41 1414-1440 cand:funRiceGene:332-pollen wall denotes abnormal pollen morphology
M_42 1414-1440 cand:PO:0025195-pollen tube cell denotes abnormal pollen morphology
M_43 1414-1440 cand:PPO:0002049-pollen cone presence denotes abnormal pollen morphology
M_44 1414-1440 cand:PPO:0002050-fresh pollen cone presence denotes abnormal pollen morphology
M_45 1414-1440 cand:TO:1000021-plant ovary morphology denotes abnormal pollen morphology
M_46 1414-1440 cand:WTO:0000044-morphology denotes abnormal pollen morphology
M_47 1414-1440 cand:funRiceGene:492-vacuolar morphology denotes abnormal pollen morphology
M_48 1414-1440 cand:TO:0000219-stem morphology denotes abnormal pollen morphology
M_49 1414-1440 cand:TO:0000862-floral organ morphology trait denotes abnormal pollen morphology
M_50 1592-1596 GeneID:GraID:GR:0060956 denotes tms2
M_51 291-294 GeneID:NA denotes ORM
M_52 5-10 GeneID:NA denotes ORMDL
M_53 1351-1361 GeneID:NA denotes Os07g26940
T26065 1322-1336 xzyao:2640 denotes low expression
T893 96-107 WTO:0000011, funRiceGene:359 denotes development
T93050 1805-1816 WTO:0000011, funRiceGene:359 denotes development
T36183 1187-1198 xzyao:23828 denotes rice plants
T70120 55-64 funRiceGene:216 denotes fertility
T28582 1764-1773 funRiceGene:216 denotes fertility
T81286 606-615 WTO:0000115, funRiceGene:26 denotes sterility
T30659 1487-1510 xzyao:5526 denotes sphingolipid metabolism
T33576 977-984 funRiceGene:462 denotes sterile
T72235 1398-1405 funRiceGene:462 denotes sterile
T40203 435-451 xzyao:18351 denotes stress responses
T657 911-927 xzyao:28643 denotes wild type plants
T27858 0-10 xzyao:34803 denotes Rice ORMDL
T70074 1140-1150 xzyao:34803 denotes rice ORMDL
T55831 948-954 WTO:0000021, funRiceGene:221 denotes growth
T52829 571-582 funRiceGene:161 denotes temperature
T74319 435-441 funRiceGene:361 denotes stress
T40584 1414-1440 xzyao:3102 denotes abnormal pollen morphology
T59185 1430-1440 WTO:0000044 denotes morphology
T7029 601-615 TO:0000437, funRiceGene:423, xzyao:6800 denotes male sterility
T97981 89-107 funRiceGene:258, xzyao:17096 denotes pollen development
T64025 1798-1816 funRiceGene:258, xzyao:17096 denotes pollen development
T48402 89-95 PO:0025281, funRiceGene:432 denotes pollen
T3404 1423-1429 PO:0025281, funRiceGene:432 denotes pollen
T52483 1798-1804 PO:0025281, funRiceGene:432 denotes pollen
T46171 33-44 funRiceGene:130 denotes homeostasis
T21932 1716-1727 funRiceGene:130 denotes homeostasis
T18735 5-10 hunflair:NA:Gene denotes ORMDL
T39215 181-186 hunflair:NA:Gene denotes ORMDL
T11936 496-501 hunflair:NA:Gene denotes ORMDL
T64644 765-770 hunflair:NA:Gene denotes ORMDL
T14997 1020-1025 hunflair:NA:Gene denotes ORMDL
T24889 1145-1150 hunflair:NA:Gene denotes ORMDL
T59616 1247-1252 hunflair:NA:Gene denotes ORMDL
T78665 1381-1386 hunflair:NA:Gene denotes ORMDL
T82855 1678-1683 hunflair:NA:Gene denotes ORMDL
T8610 284-289 hunflair:NA:Species denotes yeast
T98188 1638-1643 hunflair:NA:Species denotes yeast
T59336 358-371 hunflair:NA:Chemical denotes Sphingolipids
T773 127-130 hunflair:NA:Gene denotes ORM
T30589 173-176 hunflair:NA:Gene denotes ORM
T67189 188-191 hunflair:NA:Gene denotes ORM
T48269 291-294 hunflair:NA:Gene denotes ORM
T48743 492-495 hunflair:NA:Gene denotes ORM
T7624 273-279 hunflair:NA:Disease denotes asthma
T34191 648-652 hunflair:NA:Gene denotes tms2
T68944 799-803 hunflair:NA:Gene denotes tms2
T36993 1592-1596 hunflair:NA:Gene denotes tms2
T87282 216-222 hunflair:NA:Gene denotes ORMDL3
T3643 1032-1046 hunflair:NA:Gene denotes LOC_Os07g26940
T92439 1218-1232 hunflair:NA:Gene denotes LOC_Os07g26940
T41359 1347-1361 hunflair:NA:Gene denotes LOC_Os07g26940
T40956 0-4 hunflair:NA:Species denotes Rice
T89031 20-32 hunflair:NA:Chemical denotes sphingolipid
M_54 334-346 hunflair:NA:Chemical denotes sphingolipid
M_55 1487-1499 hunflair:NA:Chemical denotes sphingolipid
M_56 1547-1559 hunflair:NA:Chemical denotes sphingolipid
M_57 1703-1715 hunflair:NA:Chemical denotes sphingolipid
M_58 511-517 hunflair:NA:Species denotes plants
M_59 921-927 hunflair:NA:Species denotes plants
M_60 1192-1198 hunflair:NA:Species denotes plants
M_61 1310-1316 hunflair:NA:Species denotes plants
M_62 623-627 hunflair:NA:Species denotes rice
M_63 1140-1144 hunflair:NA:Species denotes rice
M_64 1187-1191 hunflair:NA:Species denotes rice
M_65 1270-1274 hunflair:NA:Species denotes rice
M_66 208-214 hunflair:NA:Species denotes humans
M_67 1630-1634 hunflair:NA:Gene denotes ORMs
M_68 284-289 pubtator:4932:Species denotes yeast
M_69 1638-1643 pubtator:4932:Species denotes yeast
M_70 273-279 pubtator:MESH:D001249:Disease denotes asthma
M_71 216-222 pubtator:94103:Gene denotes ORMDL3
M_72 0-4 pubtator:4530:Species denotes Rice
M_73 20-32 pubtator:MESH:D013107:Chemical denotes sphingolipid
M_74 334-346 pubtator:MESH:D013107:Chemical denotes sphingolipid
M_75 1487-1499 pubtator:MESH:D013107:Chemical denotes sphingolipid
M_76 1547-1559 pubtator:MESH:D013107:Chemical denotes sphingolipid
M_77 1703-1715 pubtator:MESH:D013107:Chemical denotes sphingolipid
M_78 208-214 pubtator:9606:Species denotes humans
M_79 623-627 pubtator:4530:Species denotes rice
M_80 1140-1144 pubtator:4530:Species denotes rice
M_81 1187-1191 pubtator:4530:Species denotes rice
M_82 1270-1274 pubtator:4530:Species denotes rice
M_83 20-44 pubtator:MESH:D013106:Disease denotes sphingolipid homeostasis
M_84 1703-1727 pubtator:MESH:D013106:Disease denotes sphingolipid homeostasis
M_85 358-371 pubtator:MESH:D013107:Chemical denotes Sphingolipids

21k_plant_trait_mention

Id Subject Object Predicate Lexical cue
M_0 435-441 funRiceGene:361 denotes stress
M_1 1430-1440 WTO:0000044 denotes morphology
M_2 571-615 xzyao:11302 denotes temperature sensitive genetic male sterility
M_3 977-984 funRiceGene:462 denotes sterile
M_4 1423-1429 PO:0025281, funRiceGene:432 denotes pollen
M_5 1798-1804 PO:0025281, funRiceGene:432 denotes pollen
M_6 601-615 xzyao:1081 denotes male sterility
M_7 948-954 WTO:0000021, funRiceGene:221 denotes growth
M_8 571-582 funRiceGene:161 denotes temperature
M_9 1764-1773 funRiceGene:216 denotes fertility
M_10 606-615 WTO:0000115, funRiceGene:26 denotes sterility
M_11 601-615 TO:0000437, funRiceGene:423, xzyao:10636 denotes male sterility
M_12 1032-1046 hunflair:NA:Gene denotes LOC_Os07g26940
M_13 1218-1232 hunflair:NA:Gene denotes LOC_Os07g26940
M_14 1347-1361 hunflair:NA:Gene denotes LOC_Os07g26940
M_15 216-222 hunflair:NA:Gene denotes ORMDL3
M_16 284-289 hunflair:NA:Species denotes yeast
M_17 1638-1643 hunflair:NA:Species denotes yeast
M_18 273-279 hunflair:NA:Disease denotes asthma
M_19 511-517 hunflair:NA:Species denotes plants
M_20 921-927 hunflair:NA:Species denotes plants
M_21 1192-1198 hunflair:NA:Species denotes plants
M_22 1310-1316 hunflair:NA:Species denotes plants
M_23 623-627 hunflair:NA:Species denotes rice
M_24 1140-1144 hunflair:NA:Species denotes rice
M_25 1187-1191 hunflair:NA:Species denotes rice
M_26 1270-1274 hunflair:NA:Species denotes rice
M_27 1630-1634 hunflair:NA:Gene denotes ORMs
M_28 648-652 hunflair:NA:Gene denotes tms2
M_29 799-803 hunflair:NA:Gene denotes tms2
M_30 1592-1596 hunflair:NA:Gene denotes tms2
M_31 127-130 hunflair:NA:Gene denotes ORM
M_32 173-176 hunflair:NA:Gene denotes ORM
M_33 188-191 hunflair:NA:Gene denotes ORM
M_34 291-294 hunflair:NA:Gene denotes ORM
M_35 492-495 hunflair:NA:Gene denotes ORM
M_36 20-32 hunflair:NA:Chemical denotes sphingolipid
M_37 334-346 hunflair:NA:Chemical denotes sphingolipid
M_38 1487-1499 hunflair:NA:Chemical denotes sphingolipid
M_39 1547-1559 hunflair:NA:Chemical denotes sphingolipid
M_40 1703-1715 hunflair:NA:Chemical denotes sphingolipid
M_41 0-4 hunflair:NA:Species denotes Rice
M_42 208-214 hunflair:NA:Species denotes humans
M_43 5-10 hunflair:NA:Gene denotes ORMDL
M_44 181-186 hunflair:NA:Gene denotes ORMDL
M_45 496-501 hunflair:NA:Gene denotes ORMDL
M_46 765-770 hunflair:NA:Gene denotes ORMDL
M_47 1020-1025 hunflair:NA:Gene denotes ORMDL
M_48 1145-1150 hunflair:NA:Gene denotes ORMDL
M_49 1247-1252 hunflair:NA:Gene denotes ORMDL
M_50 1381-1386 hunflair:NA:Gene denotes ORMDL
M_51 1678-1683 hunflair:NA:Gene denotes ORMDL
M_52 358-371 hunflair:NA:Chemical denotes Sphingolipids
M_53 273-279 pubtator:MESH:D001249:Disease denotes asthma
M_54 20-32 pubtator:MESH:D013107:Chemical denotes sphingolipid
M_55 334-346 pubtator:MESH:D013107:Chemical denotes sphingolipid
M_56 1487-1499 pubtator:MESH:D013107:Chemical denotes sphingolipid
M_57 1547-1559 pubtator:MESH:D013107:Chemical denotes sphingolipid
M_58 1703-1715 pubtator:MESH:D013107:Chemical denotes sphingolipid
M_59 284-289 pubtator:4932:Species denotes yeast
M_60 1638-1643 pubtator:4932:Species denotes yeast
M_61 358-371 pubtator:MESH:D013107:Chemical denotes Sphingolipids
M_62 208-214 pubtator:9606:Species denotes humans
M_63 20-44 pubtator:MESH:D013106:Disease denotes sphingolipid homeostasis
M_64 1703-1727 pubtator:MESH:D013106:Disease denotes sphingolipid homeostasis
M_65 623-627 pubtator:4530:Species denotes rice
M_66 1140-1144 pubtator:4530:Species denotes rice
M_67 1187-1191 pubtator:4530:Species denotes rice
M_68 1270-1274 pubtator:4530:Species denotes rice
M_69 0-4 pubtator:4530:Species denotes Rice
M_70 216-222 pubtator:94103:Gene denotes ORMDL3

OryzaGP_2021_v2

Id Subject Object Predicate Lexical cue
T1 136-138 http://identifiers.org/oryzabase.gene/645 denotes ER
T2 617-621 http://identifiers.org/oryzabase.gene/20863 denotes TGMS
T3 648-652 http://identifiers.org/oryzabase.gene/382 denotes tms2
T4 648-652 http://identifiers.org/oryzabase.gene/2113 denotes tms2
T5 799-803 http://identifiers.org/oryzabase.gene/382 denotes tms2
T6 799-803 http://identifiers.org/oryzabase.gene/2113 denotes tms2
T7 1592-1596 http://identifiers.org/oryzabase.gene/382 denotes tms2
T8 1592-1596 http://identifiers.org/oryzabase.gene/2113 denotes tms2

OryzaGP_2022

Id Subject Object Predicate Lexical cue
T1 571-592 http://identifiers.org/oryzabase.gene/6821 denotes temperature sensitive

OryzaGP_2021_FLAIR

Id Subject Object Predicate Lexical cue
M_0 1630-1634 hunflair:NA:Gene denotes ORMs
M_1 273-279 hunflair:NA:Disease denotes asthma
M_2 0-4 hunflair:NA:Species denotes Rice
M_3 208-214 hunflair:NA:Species denotes humans
M_4 127-130 hunflair:NA:Gene denotes ORM
M_5 173-176 hunflair:NA:Gene denotes ORM
M_6 188-191 hunflair:NA:Gene denotes ORM
M_7 291-294 hunflair:NA:Gene denotes ORM
M_8 492-495 hunflair:NA:Gene denotes ORM
M_9 511-517 hunflair:NA:Species denotes plants
M_10 921-927 hunflair:NA:Species denotes plants
M_11 1192-1198 hunflair:NA:Species denotes plants
M_12 1310-1316 hunflair:NA:Species denotes plants
M_13 623-627 hunflair:NA:Species denotes rice
M_14 1140-1144 hunflair:NA:Species denotes rice
M_15 1187-1191 hunflair:NA:Species denotes rice
M_16 1270-1274 hunflair:NA:Species denotes rice
M_17 1032-1046 hunflair:NA:Gene denotes LOC_Os07g26940
M_18 1218-1232 hunflair:NA:Gene denotes LOC_Os07g26940
M_19 1347-1361 hunflair:NA:Gene denotes LOC_Os07g26940
M_20 5-10 hunflair:NA:Gene denotes ORMDL
M_21 181-186 hunflair:NA:Gene denotes ORMDL
M_22 496-501 hunflair:NA:Gene denotes ORMDL
M_23 765-770 hunflair:NA:Gene denotes ORMDL
M_24 1020-1025 hunflair:NA:Gene denotes ORMDL
M_25 1145-1150 hunflair:NA:Gene denotes ORMDL
M_26 1247-1252 hunflair:NA:Gene denotes ORMDL
M_27 1381-1386 hunflair:NA:Gene denotes ORMDL
M_28 1678-1683 hunflair:NA:Gene denotes ORMDL
M_29 20-32 hunflair:NA:Chemical denotes sphingolipid
M_30 334-346 hunflair:NA:Chemical denotes sphingolipid
M_31 1487-1499 hunflair:NA:Chemical denotes sphingolipid
M_32 1547-1559 hunflair:NA:Chemical denotes sphingolipid
M_33 1703-1715 hunflair:NA:Chemical denotes sphingolipid
M_34 648-652 hunflair:NA:Gene denotes tms2
M_35 799-803 hunflair:NA:Gene denotes tms2
M_36 1592-1596 hunflair:NA:Gene denotes tms2
M_37 216-222 hunflair:NA:Gene denotes ORMDL3
M_38 358-371 hunflair:NA:Chemical denotes Sphingolipids
M_39 284-289 hunflair:NA:Species denotes yeast
M_40 1638-1643 hunflair:NA:Species denotes yeast

PubmedHPO

Id Subject Object Predicate Lexical cue
T1 273-279 HP_0002099 denotes asthma

OryzaGP

Id Subject Object Predicate Lexical cue
T1 571-592 gene denotes temperature sensitive
T2 617-621 gene denotes TGMS
T3 648-652 gene denotes tms2
T4 1592-1596 gene denotes tms2