PubMed:25189234
Annnotations
OryzaGP_2021
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 27-33 | http://identifiers.org/oryzabase.gene/63 | denotes | OsCCD7 |
| T2 | 52-57 | http://identifiers.org/oryzabase.gene/846 | denotes | dwarf |
| T3 | 52-57 | http://identifiers.org/oryzabase.gene/3037 | denotes | dwarf |
| T4 | 107-119 | http://identifiers.org/oryzabase.gene/8136 | denotes | plant height |
| T5 | 107-119 | http://identifiers.org/oryzabase.gene/6364 | denotes | plant height |
| T6 | 107-119 | http://identifiers.org/oryzabase.gene/11639 | denotes | plant height |
| T7 | 259-270 | http://identifiers.org/oryzabase.gene/2034 | denotes | grain yield |
| T8 | 373-378 | http://identifiers.org/oryzabase.gene/846 | denotes | dwarf |
| T9 | 373-378 | http://identifiers.org/oryzabase.gene/3037 | denotes | dwarf |
| T10 | 579-584 | http://identifiers.org/oryzabase.gene/846 | denotes | dwarf |
| T11 | 579-584 | http://identifiers.org/oryzabase.gene/3037 | denotes | dwarf |
| T12 | 628-631 | http://identifiers.org/oryzabase.gene/527 | denotes | GA3 |
| T13 | 911-915 | http://identifiers.org/oryzabase.gene/63 | denotes | CCD7 |
| T14 | 948-952 | http://identifiers.org/oryzabase.gene/63 | denotes | htd1 |
| T15 | 1198-1202 | http://identifiers.org/oryzabase.gene/63 | denotes | htd1 |
| T25706 | 27-33 | http://identifiers.org/ricegap/LOC_Os04g46470 | denotes | OsCCD7 |
| T96530 | 52-57 | http://identifiers.org/ricegap/LOC_Os03g40540 | denotes | dwarf |
| T79328 | 101-106 | http://identifiers.org/ricegap/LOC_Os03g40540 | denotes | Dwarf |
| T79216 | 107-119 | http://identifiers.org/ricegap/LOC_Os07g15770 | denotes | plant height |
| T99650 | 107-119 | http://identifiers.org/ricegap/LOC_Os02g49880 | denotes | plant height |
| T49951 | 259-270 | http://identifiers.org/ricegap/LOC_Os08g07740 | denotes | grain yield |
| T57416 | 373-378 | http://identifiers.org/ricegap/LOC_Os03g40540 | denotes | dwarf |
| T91539 | 579-584 | http://identifiers.org/ricegap/LOC_Os03g40540 | denotes | dwarf |
| T34042 | 911-915 | http://identifiers.org/ricegap/LOC_Os04g46470 | denotes | CCD7 |
| T49271 | 948-952 | http://identifiers.org/ricegap/LOC_Os04g46470 | denotes | htd1 |
| T14086 | 1198-1202 | http://identifiers.org/ricegap/LOC_Os04g46470 | denotes | htd1 |
| T52836 | 27-33 | http://identifiers.org/rapdb.locus/Os04g0550600 | denotes | OsCCD7 |
| T47612 | 52-57 | http://identifiers.org/rapdb.locus/Os03g0602300 | denotes | dwarf |
| T75681 | 101-106 | http://identifiers.org/rapdb.locus/Os03g0602300 | denotes | Dwarf |
| T23426 | 107-119 | http://identifiers.org/rapdb.locus/Os07g0261200 | denotes | plant height |
| T88900 | 107-119 | http://identifiers.org/rapdb.locus/Os02g0731700 | denotes | plant height |
| T76758 | 259-270 | http://identifiers.org/rapdb.locus/Os08g0174500 | denotes | grain yield |
| T25808 | 373-378 | http://identifiers.org/rapdb.locus/Os03g0602300 | denotes | dwarf |
| T70504 | 579-584 | http://identifiers.org/rapdb.locus/Os03g0602300 | denotes | dwarf |
| T23563 | 911-915 | http://identifiers.org/rapdb.locus/Os04g0550600 | denotes | CCD7 |
| T25598 | 948-952 | http://identifiers.org/rapdb.locus/Os04g0550600 | denotes | htd1 |
| T35137 | 1198-1202 | http://identifiers.org/rapdb.locus/Os04g0550600 | denotes | htd1 |
| T2452 | 27-33 | http://identifiers.org/uniprot/Q7XU29 | denotes | OsCCD7 |
| T18648 | 107-119 | http://identifiers.org/uniprot/Q6Z2L0 | denotes | plant height |
| T79677 | 107-119 | http://identifiers.org/uniprot/G3GJX4 | denotes | plant height |
| T85908 | 107-119 | http://identifiers.org/uniprot/B2KYD3 | denotes | plant height |
| T73731 | 911-915 | http://identifiers.org/uniprot/Q7XU29 | denotes | CCD7 |
| T13851 | 948-952 | http://identifiers.org/uniprot/Q7XU29 | denotes | htd1 |
| T65357 | 1198-1202 | http://identifiers.org/uniprot/Q7XU29 | denotes | htd1 |
| M_0 | 27-33 | hunflair:NA:Gene | denotes | OsCCD7 |
| M_1 | 628-631 | hunflair:NA:Chemical | denotes | GA3 |
| M_2 | 1077-1083 | hunflair:NA:Chemical | denotes | serine |
| M_3 | 405-409 | hunflair:NA:Gene | denotes | dit1 |
| M_4 | 1165-1175 | hunflair:NA:Chemical | denotes | amino acid |
| M_5 | 877-909 | hunflair:NA:Gene | denotes | carotenoid cleavage dioxygenase7 |
| M_6 | 95-99 | hunflair:NA:Species | denotes | rice |
| M_7 | 274-278 | hunflair:NA:Species | denotes | rice |
| M_8 | 911-915 | hunflair:NA:Gene | denotes | CCD7 |
| M_9 | 948-952 | hunflair:NA:Gene | denotes | htd1 |
| M_10 | 1198-1202 | hunflair:NA:Gene | denotes | htd1 |
| M_11 | 52-57 | hunflair:NA:Gene | denotes | dwarf |
| M_12 | 373-378 | hunflair:NA:Gene | denotes | dwarf |
| M_13 | 579-584 | hunflair:NA:Gene | denotes | dwarf |
| M_14 | 636-654 | hunflair:NA:Chemical | denotes | 24-epibrassinolide |
| M_15 | 393-403 | hunflair:NA:Gene | denotes | tillering1 |
pqqtest_sentence
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| M_0 | 455-478 | cand:TO:0000515-relative growth rate | denotes | proportionate reduction |
| M_1 | 455-478 | cand:funRiceGene:155-growth rate | denotes | proportionate reduction |
| M_2 | 455-478 | cand:TO:0001027-net photosynthetic rate | denotes | proportionate reduction |
| M_3 | 455-478 | cand:WTO:0000344-response to phophorus limitation | denotes | proportionate reduction |
| M_4 | 455-478 | cand:WTO:0000257-response to primary nutrient limitation | denotes | proportionate reduction |
| M_5 | 455-478 | cand:TO:0000633-relative total dry weight | denotes | proportionate reduction |
| M_6 | 455-478 | cand:funRiceGene:504-biomass production | denotes | proportionate reduction |
| M_7 | 455-478 | cand:funRiceGene:450-root initiation | denotes | proportionate reduction |
| M_8 | 455-478 | cand:funRiceGene:109-phytoalexin production | denotes | proportionate reduction |
| M_9 | 455-478 | cand:funRiceGene:172-bioethanol production | denotes | proportionate reduction |
| M_10 | 455-478 | cand:WTO:0000049-reproduction | denotes | proportionate reduction |
| M_11 | 579-584 | GeneID:GraID:GR:0060222 | denotes | dwarf |
| T22943 | 1352-1369 | funRiceGene:374, xzyao:18955 | denotes | plant development |
| T93885 | 1358-1369 | WTO:0000011, funRiceGene:359 | denotes | development |
| T70189 | 579-592 | xzyao:23629 | denotes | dwarf mutants |
| T4970 | 62-91 | xzyao:15375 | denotes | increased tillering phenotype |
| T75959 | 72-81 | funRiceGene:478 | denotes | tillering |
| T76778 | 124-133 | funRiceGene:478 | denotes | tillering |
| T29536 | 259-270 | funRiceGene:312, xzyao:28456 | denotes | grain yield |
| T30724 | 265-270 | funRiceGene:377 | denotes | yield |
| T22442 | 172-188 | xzyao:41193 | denotes | agronomic traits |
| T52363 | 259-264 | funRiceGene:91 | denotes | grain |
| T75469 | 208-226 | funRiceGene:494, xzyao:14955 | denotes | plant architecture |
| T96323 | 712-720 | xzyao:38844 | denotes | The gene |
| M_12 | 1035-1043 | xzyao:38844 | denotes | the gene |
| M_13 | 162-188 | xzyao:33589 | denotes | important agronomic traits |
| M_14 | 124-141 | TO:0000329, xzyao:35767 | denotes | tillering ability |
| M_15 | 214-226 | funRiceGene:351 | denotes | architecture |
| M_16 | 1374-1386 | funRiceGene:351 | denotes | architecture |
| M_17 | 52-57 | funRiceGene:135 | denotes | dwarf |
| M_18 | 101-106 | funRiceGene:135 | denotes | Dwarf |
| M_19 | 373-378 | funRiceGene:135 | denotes | dwarf |
| M_20 | 579-584 | funRiceGene:135 | denotes | dwarf |
| M_21 | 82-91 | WTO:0000005 | denotes | phenotype |
| M_22 | 687-696 | WTO:0000005 | denotes | phenotype |
| M_23 | 107-119 | TO:0000207, funRiceGene:271, xzyao:3305 | denotes | plant height |
| M_24 | 603-624 | xzyao:30555 | denotes | exogenous application |
| M_25 | 877-909 | xzyao:29475 | denotes | carotenoid cleavage dioxygenase7 |
| M_26 | 72-91 | xzyao:4452 | denotes | tillering phenotype |
| M_27 | 62-81 | xzyao:32202 | denotes | increased tillering |
| M_28 | 113-119 | funRiceGene:501 | denotes | height |
| M_29 | 1165-1175 | xzyao:10364 | denotes | amino acid |
| M_30 | 455-478 | xzyao:39819 | denotes | proportionate reduction |
| M_31 | 1077-1083 | hunflair:NA:Chemical | denotes | serine |
| M_32 | 877-909 | hunflair:NA:Gene | denotes | carotenoid cleavage dioxygenase7 |
| M_33 | 405-409 | hunflair:NA:Gene | denotes | dit1 |
| M_34 | 1165-1175 | hunflair:NA:Chemical | denotes | amino acid |
| M_35 | 911-915 | hunflair:NA:Gene | denotes | CCD7 |
| M_36 | 52-57 | hunflair:NA:Gene | denotes | dwarf |
| M_37 | 373-378 | hunflair:NA:Gene | denotes | dwarf |
| M_38 | 579-584 | hunflair:NA:Gene | denotes | dwarf |
| M_39 | 948-952 | hunflair:NA:Gene | denotes | htd1 |
| M_40 | 1198-1202 | hunflair:NA:Gene | denotes | htd1 |
| M_41 | 636-654 | hunflair:NA:Chemical | denotes | 24-epibrassinolide |
| M_42 | 95-99 | hunflair:NA:Species | denotes | rice |
| M_43 | 274-278 | hunflair:NA:Species | denotes | rice |
| M_44 | 27-33 | hunflair:NA:Gene | denotes | OsCCD7 |
| M_45 | 393-403 | hunflair:NA:Gene | denotes | tillering1 |
| M_46 | 628-631 | hunflair:NA:Chemical | denotes | GA3 |
| M_47 | 636-654 | pubtator:MESH:C023623:Chemical | denotes | 24-epibrassinolide |
| M_48 | 1077-1083 | pubtator:MESH:C047902:Chemical | denotes | serine |
| M_49 | 95-99 | pubtator:4530:Species | denotes | rice |
| M_50 | 274-278 | pubtator:4530:Species | denotes | rice |
| M_51 | 351-354 | pubtator:MESH:C436350:Chemical | denotes | EMS |
21k_plant_trait_mention
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| M_0 | 124-133 | funRiceGene:478 | denotes | tillering |
| M_1 | 124-141 | TO:0000329, xzyao:12192 | denotes | tillering ability |
| M_2 | 1352-1369 | funRiceGene:374, xzyao:5921 | denotes | plant development |
| M_3 | 113-119 | funRiceGene:501 | denotes | height |
| M_4 | 687-696 | WTO:0000005 | denotes | phenotype |
| M_5 | 259-270 | funRiceGene:312, xzyao:11323 | denotes | grain yield |
| M_6 | 265-270 | funRiceGene:377 | denotes | yield |
| M_7 | 101-106 | funRiceGene:135 | denotes | Dwarf |
| M_8 | 373-378 | funRiceGene:135 | denotes | dwarf |
| M_9 | 579-584 | funRiceGene:135 | denotes | dwarf |
| M_10 | 259-264 | funRiceGene:91 | denotes | grain |
| M_11 | 107-119 | TO:0000207, funRiceGene:271, xzyao:10195 | denotes | plant height |
| M_12 | 1358-1369 | WTO:0000011, funRiceGene:359 | denotes | development |
| M_13 | 107-119 | xzyao:5696 | denotes | plant height |
| M_14 | 107-119 | xzyao:17229 | denotes | plant height |
| M_15 | 27-33 | hunflair:NA:Gene | denotes | OsCCD7 |
| M_16 | 1077-1083 | hunflair:NA:Chemical | denotes | serine |
| M_17 | 948-952 | hunflair:NA:Gene | denotes | htd1 |
| M_18 | 1198-1202 | hunflair:NA:Gene | denotes | htd1 |
| M_19 | 636-654 | hunflair:NA:Chemical | denotes | 24-epibrassinolide |
| M_20 | 1165-1175 | hunflair:NA:Chemical | denotes | amino acid |
| M_21 | 95-99 | hunflair:NA:Species | denotes | rice |
| M_22 | 274-278 | hunflair:NA:Species | denotes | rice |
| M_23 | 52-57 | hunflair:NA:Gene | denotes | dwarf |
| M_24 | 373-378 | hunflair:NA:Gene | denotes | dwarf |
| M_25 | 579-584 | hunflair:NA:Gene | denotes | dwarf |
| M_26 | 393-403 | hunflair:NA:Gene | denotes | tillering1 |
| M_27 | 628-631 | hunflair:NA:Chemical | denotes | GA3 |
| M_28 | 911-915 | hunflair:NA:Gene | denotes | CCD7 |
| M_29 | 405-409 | hunflair:NA:Gene | denotes | dit1 |
| M_30 | 877-909 | hunflair:NA:Gene | denotes | carotenoid cleavage dioxygenase7 |
| M_31 | 351-354 | pubtator:MESH:C436350:Chemical | denotes | EMS |
| M_32 | 1077-1083 | pubtator:MESH:C047902:Chemical | denotes | serine |
| M_33 | 636-654 | pubtator:MESH:C023623:Chemical | denotes | 24-epibrassinolide |
| M_34 | 95-99 | pubtator:4530:Species | denotes | rice |
| M_35 | 274-278 | pubtator:4530:Species | denotes | rice |
OryzaGP_2021_v2
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 27-33 | http://identifiers.org/oryzabase.gene/63 | denotes | OsCCD7 |
| T2 | 628-631 | http://identifiers.org/oryzabase.gene/527 | denotes | GA3 |
| T3 | 911-915 | http://identifiers.org/oryzabase.gene/63 | denotes | CCD7 |
| T4 | 948-952 | http://identifiers.org/oryzabase.gene/63 | denotes | htd1 |
| T5 | 1198-1202 | http://identifiers.org/oryzabase.gene/63 | denotes | htd1 |
| T50841 | 27-33 | http://identifiers.org/rapdb.locus/Os04g0550600 | denotes | OsCCD7 |
| T25175 | 911-915 | http://identifiers.org/rapdb.locus/Os04g0550600 | denotes | CCD7 |
| T98498 | 948-952 | http://identifiers.org/rapdb.locus/Os04g0550600 | denotes | htd1 |
| T41141 | 1198-1202 | http://identifiers.org/rapdb.locus/Os04g0550600 | denotes | htd1 |
OryzaGP_2022
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 52-57 | http://identifiers.org/oryzabase.gene/846 | denotes | dwarf |
| T2 | 101-106 | http://identifiers.org/oryzabase.gene/846 | denotes | Dwarf |
| T3 | 107-119 | http://identifiers.org/oryzabase.gene/6364 | denotes | plant height |
| T4 | 373-378 | http://identifiers.org/oryzabase.gene/846 | denotes | dwarf |
| T5 | 579-584 | http://identifiers.org/oryzabase.gene/846 | denotes | dwarf |
OryzaGP_2021_FLAIR
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| M_0 | 27-33 | hunflair:NA:Gene | denotes | OsCCD7 |
| M_1 | 628-631 | hunflair:NA:Chemical | denotes | GA3 |
| M_2 | 1077-1083 | hunflair:NA:Chemical | denotes | serine |
| M_3 | 405-409 | hunflair:NA:Gene | denotes | dit1 |
| M_4 | 1165-1175 | hunflair:NA:Chemical | denotes | amino acid |
| M_5 | 877-909 | hunflair:NA:Gene | denotes | carotenoid cleavage dioxygenase7 |
| M_6 | 95-99 | hunflair:NA:Species | denotes | rice |
| M_7 | 274-278 | hunflair:NA:Species | denotes | rice |
| M_8 | 911-915 | hunflair:NA:Gene | denotes | CCD7 |
| M_9 | 948-952 | hunflair:NA:Gene | denotes | htd1 |
| M_10 | 1198-1202 | hunflair:NA:Gene | denotes | htd1 |
| M_11 | 52-57 | hunflair:NA:Gene | denotes | dwarf |
| M_12 | 373-378 | hunflair:NA:Gene | denotes | dwarf |
| M_13 | 579-584 | hunflair:NA:Gene | denotes | dwarf |
| M_14 | 636-654 | hunflair:NA:Chemical | denotes | 24-epibrassinolide |
| M_15 | 393-403 | hunflair:NA:Gene | denotes | tillering1 |
OryzaGP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 27-33 | gene | denotes | OsCCD7 |
| T2 | 911-915 | gene | denotes | CCD7 |