PubMed:25184028
Annnotations
OryzaGP_2021
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-6 | http://identifiers.org/oryzabase.gene/13479 | denotes | OsSUV3 |
| T2 | 167-171 | http://identifiers.org/oryzabase.gene/13479 | denotes | SUV3 |
| T3 | 173-192 | http://identifiers.org/oryzabase.gene/13479 | denotes | suppressor of Var 3 |
| T4 | 217-229 | http://identifiers.org/oryzabase.gene/15167 | denotes | RNA helicase |
| T5 | 277-281 | http://identifiers.org/oryzabase.gene/13479 | denotes | SUV3 |
| T6 | 361-365 | http://identifiers.org/oryzabase.gene/13479 | denotes | SUV3 |
| T7 | 474-478 | http://identifiers.org/oryzabase.gene/13479 | denotes | SUV3 |
| T8 | 500-512 | http://identifiers.org/oryzabase.gene/15167 | denotes | RNA helicase |
| T9 | 586-597 | http://identifiers.org/oryzabase.gene/20174 | denotes | antioxidant |
| T10 | 660-666 | http://identifiers.org/oryzabase.gene/13479 | denotes | OsSUV3 |
| T11 | 685-689 | http://identifiers.org/oryzabase.gene/451 | denotes | salt |
| T12 | 685-689 | http://identifiers.org/oryzabase.gene/21170 | denotes | salt |
| T13 | 723-729 | http://identifiers.org/oryzabase.gene/13479 | denotes | OsSUV3 |
| T14 | 848-851 | http://identifiers.org/oryzabase.gene/527 | denotes | GA3 |
| T15 | 1002-1006 | http://identifiers.org/oryzabase.gene/451 | denotes | salt |
| T16 | 1002-1006 | http://identifiers.org/oryzabase.gene/21170 | denotes | salt |
| T17 | 1135-1141 | http://identifiers.org/oryzabase.gene/13479 | denotes | OsSUV3 |
| T18 | 1241-1247 | http://identifiers.org/oryzabase.gene/13479 | denotes | OsSUV3 |
| T19 | 1383-1387 | http://identifiers.org/oryzabase.gene/451 | denotes | salt |
| T20 | 1383-1387 | http://identifiers.org/oryzabase.gene/21170 | denotes | salt |
| T38117 | 0-6 | http://identifiers.org/ricegap/LOC_Os03g53500 | denotes | OsSUV3 |
| T93913 | 167-171 | http://identifiers.org/ricegap/LOC_Os03g53500 | denotes | SUV3 |
| T58920 | 173-192 | http://identifiers.org/ricegap/LOC_Os03g53500 | denotes | suppressor of Var 3 |
| T57672 | 217-229 | http://identifiers.org/ricegap/LOC_Os08g32090 | denotes | RNA helicase |
| T72616 | 277-281 | http://identifiers.org/ricegap/LOC_Os03g53500 | denotes | SUV3 |
| T5290 | 361-365 | http://identifiers.org/ricegap/LOC_Os03g53500 | denotes | SUV3 |
| T59069 | 474-478 | http://identifiers.org/ricegap/LOC_Os03g53500 | denotes | SUV3 |
| T18963 | 500-512 | http://identifiers.org/ricegap/LOC_Os08g32090 | denotes | RNA helicase |
| T1908 | 586-597 | http://identifiers.org/ricegap/LOC_Os01g61070 | denotes | antioxidant |
| T61026 | 660-666 | http://identifiers.org/ricegap/LOC_Os03g53500 | denotes | OsSUV3 |
| T83932 | 685-689 | http://identifiers.org/ricegap/LOC_Os11g07450 | denotes | salt |
| T94552 | 685-689 | http://identifiers.org/ricegap/LOC_Os01g24710 | denotes | salt |
| T62897 | 723-729 | http://identifiers.org/ricegap/LOC_Os03g53500 | denotes | OsSUV3 |
| T2862 | 1002-1006 | http://identifiers.org/ricegap/LOC_Os11g07450 | denotes | salt |
| T52157 | 1002-1006 | http://identifiers.org/ricegap/LOC_Os01g24710 | denotes | salt |
| T70757 | 1135-1141 | http://identifiers.org/ricegap/LOC_Os03g53500 | denotes | OsSUV3 |
| T49025 | 1241-1247 | http://identifiers.org/ricegap/LOC_Os03g53500 | denotes | OsSUV3 |
| T97580 | 1383-1387 | http://identifiers.org/ricegap/LOC_Os11g07450 | denotes | salt |
| T16578 | 1383-1387 | http://identifiers.org/ricegap/LOC_Os01g24710 | denotes | salt |
| T24298 | 0-6 | http://identifiers.org/rapdb.locus/Os03g0746500 | denotes | OsSUV3 |
| T3226 | 167-171 | http://identifiers.org/rapdb.locus/Os03g0746500 | denotes | SUV3 |
| T88152 | 173-192 | http://identifiers.org/rapdb.locus/Os03g0746500 | denotes | suppressor of Var 3 |
| T22204 | 217-229 | http://identifiers.org/rapdb.locus/Os08g0416100 | denotes | RNA helicase |
| T58103 | 277-281 | http://identifiers.org/rapdb.locus/Os03g0746500 | denotes | SUV3 |
| T50867 | 361-365 | http://identifiers.org/rapdb.locus/Os03g0746500 | denotes | SUV3 |
| T96690 | 474-478 | http://identifiers.org/rapdb.locus/Os03g0746500 | denotes | SUV3 |
| T78737 | 500-512 | http://identifiers.org/rapdb.locus/Os08g0416100 | denotes | RNA helicase |
| T71672 | 586-597 | http://identifiers.org/rapdb.locus/Os01g0826000 | denotes | antioxidant |
| T6062 | 660-666 | http://identifiers.org/rapdb.locus/Os03g0746500 | denotes | OsSUV3 |
| T71714 | 685-689 | http://identifiers.org/rapdb.locus/Os11g0175500 | denotes | salt |
| T95856 | 685-689 | http://identifiers.org/rapdb.locus/Os01g0348900 | denotes | salt |
| T68654 | 723-729 | http://identifiers.org/rapdb.locus/Os03g0746500 | denotes | OsSUV3 |
| T87467 | 1002-1006 | http://identifiers.org/rapdb.locus/Os11g0175500 | denotes | salt |
| T12530 | 1002-1006 | http://identifiers.org/rapdb.locus/Os01g0348900 | denotes | salt |
| T11913 | 1135-1141 | http://identifiers.org/rapdb.locus/Os03g0746500 | denotes | OsSUV3 |
| T435 | 1241-1247 | http://identifiers.org/rapdb.locus/Os03g0746500 | denotes | OsSUV3 |
| T1298 | 1383-1387 | http://identifiers.org/rapdb.locus/Os11g0175500 | denotes | salt |
| T49083 | 1383-1387 | http://identifiers.org/rapdb.locus/Os01g0348900 | denotes | salt |
| T53852 | 0-6 | http://identifiers.org/uniprot/Q10D00 | denotes | OsSUV3 |
| T77424 | 0-6 | http://identifiers.org/refseq/NP_193215.2 | denotes | OsSUV3 |
| T30010 | 167-171 | http://identifiers.org/uniprot/Q10D00 | denotes | SUV3 |
| T6545 | 167-171 | http://identifiers.org/refseq/NP_193215.2 | denotes | SUV3 |
| T83426 | 173-192 | http://identifiers.org/uniprot/Q10D00 | denotes | suppressor of Var 3 |
| T27229 | 173-192 | http://identifiers.org/refseq/NP_193215.2 | denotes | suppressor of Var 3 |
| T36925 | 217-229 | http://identifiers.org/uniprot/A2YV85 | denotes | RNA helicase |
| T64406 | 277-281 | http://identifiers.org/uniprot/Q10D00 | denotes | SUV3 |
| T30506 | 277-281 | http://identifiers.org/refseq/NP_193215.2 | denotes | SUV3 |
| T83121 | 361-365 | http://identifiers.org/uniprot/Q10D00 | denotes | SUV3 |
| T34004 | 361-365 | http://identifiers.org/refseq/NP_193215.2 | denotes | SUV3 |
| T33591 | 474-478 | http://identifiers.org/uniprot/Q10D00 | denotes | SUV3 |
| T21096 | 474-478 | http://identifiers.org/refseq/NP_193215.2 | denotes | SUV3 |
| T18891 | 500-512 | http://identifiers.org/uniprot/A2YV85 | denotes | RNA helicase |
| T46319 | 586-597 | http://identifiers.org/refseq/NP_001078533.1 | denotes | antioxidant |
| T93067 | 660-666 | http://identifiers.org/uniprot/Q10D00 | denotes | OsSUV3 |
| T96222 | 660-666 | http://identifiers.org/refseq/NP_193215.2 | denotes | OsSUV3 |
| T37247 | 685-689 | http://identifiers.org/uniprot/Q53PH3 | denotes | salt |
| T36742 | 685-689 | http://identifiers.org/uniprot/B9G9N6 | denotes | salt |
| T29478 | 723-729 | http://identifiers.org/uniprot/Q10D00 | denotes | OsSUV3 |
| T21 | 723-729 | http://identifiers.org/refseq/NP_193215.2 | denotes | OsSUV3 |
| T22 | 1002-1006 | http://identifiers.org/uniprot/Q53PH3 | denotes | salt |
| T23 | 1002-1006 | http://identifiers.org/uniprot/B9G9N6 | denotes | salt |
| T24 | 1135-1141 | http://identifiers.org/uniprot/Q10D00 | denotes | OsSUV3 |
| T25 | 1135-1141 | http://identifiers.org/refseq/NP_193215.2 | denotes | OsSUV3 |
| T26 | 1241-1247 | http://identifiers.org/uniprot/Q10D00 | denotes | OsSUV3 |
| T27 | 1241-1247 | http://identifiers.org/refseq/NP_193215.2 | denotes | OsSUV3 |
| T28 | 1383-1387 | http://identifiers.org/uniprot/Q53PH3 | denotes | salt |
| T29 | 1383-1387 | http://identifiers.org/uniprot/B9G9N6 | denotes | salt |
| M_0 | 854-860 | hunflair:NA:Chemical | denotes | zeatin |
| M_1 | 848-851 | hunflair:NA:Chemical | denotes | GA3 |
| M_2 | 0-6 | hunflair:NA:Gene | denotes | OsSUV3 |
| M_3 | 660-666 | hunflair:NA:Gene | denotes | OsSUV3 |
| M_4 | 723-729 | hunflair:NA:Gene | denotes | OsSUV3 |
| M_5 | 1135-1141 | hunflair:NA:Gene | denotes | OsSUV3 |
| M_6 | 1241-1247 | hunflair:NA:Gene | denotes | OsSUV3 |
| M_7 | 173-192 | hunflair:NA:Gene | denotes | suppressor of Var 3 |
| M_8 | 367-376 | hunflair:NA:Gene | denotes | AT4G14790 |
| M_9 | 869-889 | hunflair:NA:Chemical | denotes | indole-3-acetic acid |
| M_10 | 891-894 | hunflair:NA:Chemical | denotes | IAA |
| M_11 | 217-229 | hunflair:NA:Gene | denotes | RNA helicase |
| M_12 | 500-512 | hunflair:NA:Gene | denotes | RNA helicase |
| M_13 | 1015-1019 | hunflair:NA:Chemical | denotes | NaCl |
| M_14 | 18-22 | hunflair:NA:Species | denotes | rice |
| M_15 | 469-473 | hunflair:NA:Species | denotes | rice |
| M_16 | 667-671 | hunflair:NA:Species | denotes | rice |
| M_17 | 745-749 | hunflair:NA:Species | denotes | rice |
| M_18 | 1153-1157 | hunflair:NA:Species | denotes | rice |
| M_19 | 1248-1252 | hunflair:NA:Species | denotes | rice |
| M_20 | 660-678 | hunflair:NA:Species | denotes | OsSUV3 rice plants |
| M_21 | 1241-1259 | hunflair:NA:Species | denotes | OsSUV3 rice plants |
| M_22 | 167-171 | hunflair:NA:Gene | denotes | SUV3 |
| M_23 | 277-281 | hunflair:NA:Gene | denotes | SUV3 |
| M_24 | 361-365 | hunflair:NA:Gene | denotes | SUV3 |
| M_25 | 474-478 | hunflair:NA:Gene | denotes | SUV3 |
| M_26 | 830-846 | hunflair:NA:Chemical | denotes | gibberellic acid |
| M_27 | 337-348 | hunflair:NA:Species | denotes | Arabidopsis |
pqqtest_sentence
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| M_0 | 1271-1291 | cand:TO:0000401-plant growth hormone sensitivity | denotes | plant hormone levels |
| M_1 | 1271-1291 | cand:funRiceGene:128-plant growth | denotes | plant hormone levels |
| M_2 | 1271-1291 | cand:PECO:0001002-plant growth environment | denotes | plant hormone levels |
| M_3 | 1271-1291 | cand:PECO:0007045-primary plant macronutrient exposure | denotes | plant hormone levels |
| M_4 | 1271-1291 | cand:PPO:0007000-plant growth cycle | denotes | plant hormone levels |
| M_5 | 1271-1291 | cand:WTO:0000100-plant precocity | denotes | plant hormone levels |
| M_6 | 1271-1291 | cand:PO:0025005-plant organ margin | denotes | plant hormone levels |
| M_7 | 1271-1291 | cand:PO:0025266-plant ovary locule | denotes | plant hormone levels |
| M_8 | 1271-1291 | cand:PO:0025490-plant ovary ovule | denotes | plant hormone levels |
| M_9 | 1271-1291 | cand:PO:0000084-plant sperm cell | denotes | plant hormone levels |
| M_10 | 1271-1291 | cand:PO:0025513-plant organ lamina | denotes | plant hormone levels |
| M_11 | 526-551 | cand:funRiceGene:193-salinity stress | denotes | salinity stress tolerance |
| M_12 | 526-551 | cand:funRiceGene:72-drought tolerance | denotes | salinity stress tolerance |
| M_13 | 526-551 | cand:funRiceGene:170-drought stress response | denotes | salinity stress tolerance |
| M_14 | 526-551 | cand:funRiceGene:138-drought stress | denotes | salinity stress tolerance |
| M_15 | 526-551 | cand:funRiceGene:77-drought and oxidative stress | denotes | salinity stress tolerance |
| M_16 | 526-551 | cand:funRiceGene:43-biotic stress | denotes | salinity stress tolerance |
| M_17 | 526-551 | cand:funRiceGene:137-aluminum tolerance | denotes | salinity stress tolerance |
| M_18 | 526-551 | cand:WTO:0000240-moisture tolerance | denotes | salinity stress tolerance |
| M_19 | 526-551 | cand:funRiceGene:236-stress tolerance | denotes | salinity stress tolerance |
| M_20 | 526-551 | cand:funRiceGene:30-salt tolerance | denotes | salinity stress tolerance |
| M_21 | 91-106 | cand:TO:0000624-allelopathic effect | denotes | adverse effects |
| M_22 | 91-106 | cand:WTO:0000536-lead toxicity | denotes | adverse effects |
| M_23 | 91-106 | cand:PECO:0001049-limited magnesium exposure | denotes | adverse effects |
| M_24 | 91-106 | cand:PECO:0001046-limited phosphate exposure | denotes | adverse effects |
| M_25 | 91-106 | cand:WTO:0000050-response to environmental condition | denotes | adverse effects |
| M_26 | 91-106 | cand:PECO:0007541-hesperidine exposure | denotes | adverse effects |
| M_27 | 91-106 | cand:PPO:0000004-upper percent | denotes | adverse effects |
| M_28 | 91-106 | cand:WTO:0000203-water stress | denotes | adverse effects |
| M_29 | 91-106 | cand:TO:0000872-leaf erect | denotes | adverse effects |
| M_30 | 91-106 | cand:PO:0030107-achene fruit | denotes | adverse effects |
| M_31 | 91-106 | cand:PPO:0000003-lower percent | denotes | adverse effects |
| M_32 | 1443-1460 | cand:WTO:0000071-crop yield | denotes | crop productivity |
| M_33 | 1443-1460 | cand:TO:0000449-grain yield per plant | denotes | crop productivity |
| M_34 | 1443-1460 | cand:PECO:0007085-fertilizer exposure | denotes | crop productivity |
| M_35 | 1443-1460 | cand:PECO:0007087-natural fertilizer exposure | denotes | crop productivity |
| M_36 | 1443-1460 | cand:TO:0000597-plant quality trait | denotes | crop productivity |
| M_37 | 1443-1460 | cand:PPO:0001000-herbaceous plant | denotes | crop productivity |
| M_38 | 1443-1460 | cand:funRiceGene:336-reproductive | denotes | crop productivity |
| M_39 | 1443-1460 | cand:TO:0000018-boron sensitivity | denotes | crop productivity |
| M_40 | 1443-1460 | cand:TO:0000224-iron sensitivity | denotes | crop productivity |
| M_41 | 1443-1460 | cand:WTO:0000049-reproduction | denotes | crop productivity |
| M_42 | 1443-1460 | cand:TO:0000434-root activity | denotes | crop productivity |
| M_43 | 586-607 | cand:funRiceGene:290-plant defense signaling | denotes | antioxidant machinery |
| M_44 | 586-607 | cand:funRiceGene:15-flavonoid metabolism | denotes | antioxidant machinery |
| M_45 | 586-607 | cand:funRiceGene:174-redox homeostasis | denotes | antioxidant machinery |
| M_46 | 586-607 | cand:WTO:0000002-polyphenol content | denotes | antioxidant machinery |
| M_47 | 586-607 | cand:funRiceGene:141-oxidative stress | denotes | antioxidant machinery |
| M_48 | 586-607 | cand:TO:0000290-flavonoid content | denotes | antioxidant machinery |
| M_49 | 586-607 | cand:PO:0020093-antipodal cell | denotes | antioxidant machinery |
| M_50 | 586-607 | cand:funRiceGene:38-antiviral immunity | denotes | antioxidant machinery |
| M_51 | 586-607 | cand:PO:0025005-plant organ margin | denotes | antioxidant machinery |
| M_52 | 586-607 | cand:PO:0025012-cotyledon margin | denotes | antioxidant machinery |
| M_53 | 586-607 | cand:PO:0025010-petiole margin | denotes | antioxidant machinery |
| M_54 | 271-281 | cand:PO:0025521-unicellular plant gametangium | denotes | Plant SUV3 |
| M_55 | 271-281 | cand:PO:0000006-plant protoplast | denotes | Plant SUV3 |
| M_56 | 271-281 | cand:PO:0025017-plant spore | denotes | Plant SUV3 |
| M_57 | 271-281 | cand:PECO:0007108-Proteobacterial plant exposure | denotes | Plant SUV3 |
| M_58 | 271-281 | cand:PECO:0007005-Viridiplantae plant exposure | denotes | Plant SUV3 |
| M_59 | 271-281 | cand:PPO:0001000-herbaceous plant | denotes | Plant SUV3 |
| M_60 | 271-281 | cand:PO:0025538-plant sap | denotes | Plant SUV3 |
| M_61 | 271-281 | cand:PO:0009002-plant cell | denotes | Plant SUV3 |
| M_62 | 271-281 | cand:PO:0025004-plant axis | denotes | Plant SUV3 |
| M_63 | 271-281 | cand:PO:0020003-plant ovule | denotes | Plant SUV3 |
| M_64 | 500-512 | GeneID:RAPID:Os08g0416100MSUID:LOC_Os08g32090 | denotes | RNA helicase |
| M_65 | 0-6 | GeneID:RAPID:Os03g0746500MSUID:LOC_Os03g53500 | denotes | OsSUV3 |
| M_66 | 1241-1247 | GeneID:RAPID:Os03g0746500MSUID:LOC_Os03g53500 | denotes | OsSUV3 |
| M_67 | 474-478 | GeneID:RAPID:Os03g0746500MSUID:LOC_Os03g53500 | denotes | SUV3 |
| M_68 | 277-281 | GeneID:RAPID:Os03g0746500MSUID:LOC_Os03g53500 | denotes | SUV3 |
| T75673 | 271-281 | xzyao:16082 | denotes | Plant SUV3 |
| T49468 | 567-581 | funRiceGene:235 | denotes | photosynthesis |
| T91285 | 535-551 | funRiceGene:287, xzyao:3037 | denotes | stress tolerance |
| T25351 | 422-433 | WTO:0000011, funRiceGene:359 | denotes | development |
| T15515 | 1408-1419 | WTO:0000011, funRiceGene:359 | denotes | development |
| T51278 | 667-678 | xzyao:23828 | denotes | rice plants |
| T28726 | 1248-1259 | xzyao:23828 | denotes | rice plants |
| T515 | 257-269 | funRiceGene:68 | denotes | mitochondria |
| T34322 | 914-918 | PO:0009005, funRiceGene:362 | denotes | root |
| T51127 | 526-541 | funRiceGene:262, xzyao:1973 | denotes | salinity stress |
| T95690 | 217-229 | xzyao:31642 | denotes | RNA helicase |
| T66712 | 500-512 | xzyao:31642 | denotes | RNA helicase |
| T15943 | 891-894 | funRiceGene:5 | denotes | IAA |
| T33775 | 1041-1054 | xzyao:1762 | denotes | similar trend |
| T27674 | 830-846 | xzyao:42174 | denotes | gibberellic acid |
| T44468 | 685-696 | funRiceGene:517, xzyao:21986 | denotes | salt stress |
| T3020 | 33-57 | xzyao:12736 | denotes | higher endogenous levels |
| T77969 | 1324-1339 | xzyao:41249 | denotes | several stress- |
| T62583 | 1397-1403 | WTO:0000021, funRiceGene:221 | denotes | growth |
| T70802 | 685-689 | funRiceGene:528 | denotes | salt |
| T55739 | 1002-1006 | funRiceGene:528 | denotes | salt |
| T32283 | 1383-1387 | funRiceGene:528 | denotes | salt |
| T84818 | 899-903 | PO:0025034, funRiceGene:469 | denotes | leaf |
| T66469 | 221-229 | funRiceGene:115 | denotes | helicase |
| T97655 | 504-512 | funRiceGene:115 | denotes | helicase |
| T66872 | 535-541 | funRiceGene:361 | denotes | stress |
| T53592 | 690-696 | funRiceGene:361 | denotes | stress |
| T93638 | 1021-1027 | funRiceGene:361 | denotes | stress |
| T31196 | 1187-1193 | funRiceGene:361 | denotes | stress |
| T9198 | 1233-1239 | funRiceGene:361 | denotes | stress |
| T11641 | 1332-1338 | funRiceGene:361 | denotes | stress |
| T29153 | 1271-1291 | xzyao:23106 | denotes | plant hormone levels |
| T71218 | 878-889 | xzyao:38475 | denotes | acetic acid |
| T22411 | 61-75 | xzyao:33520 | denotes | plant hormones |
| T31780 | 809-823 | xzyao:33520 | denotes | plant hormones |
| T40466 | 1069-1083 | xzyao:33520 | denotes | plant hormones |
| T56949 | 110-118 | funRiceGene:375 | denotes | salinity |
| T3126 | 526-534 | funRiceGene:375 | denotes | salinity |
| T41853 | 526-551 | xzyao:42781 | denotes | salinity stress tolerance |
| T69076 | 1391-1403 | funRiceGene:44, xzyao:29681 | denotes | plant growth |
| T646 | 1058-1083 | xzyao:33423 | denotes | endogenous plant hormones |
| T84907 | 905-909 | PO:0009047, funRiceGene:321 | denotes | stem |
| T75082 | 787-805 | xzyao:37385 | denotes | endogenous content |
| T47827 | 411-421 | PO:0025074, xzyao:15325 | denotes | embryo sac |
| T16693 | 1271-1284 | xzyao:2600 | denotes | plant hormone |
| T89796 | 1021-1037 | xzyao:8238 | denotes | stress condition |
| T99704 | 1187-1203 | xzyao:8238 | denotes | stress condition |
| T97987 | 542-551 | funRiceGene:214 | denotes | tolerance |
| T91994 | 1277-1291 | xzyao:32661 | denotes | hormone levels |
| T61815 | 891-894 | funRiceGene:407 | denotes | IAA |
| T28644 | 766-805 | xzyao:42137 | denotes | significantly higher endogenous content |
| T36974 | 40-57 | xzyao:43268 | denotes | endogenous levels |
| T36187 | 869-889 | xzyao:24104 | denotes | indole-3-acetic acid |
| T99741 | 132-149 | xzyao:39503 | denotes | crop productivity |
| T71650 | 1443-1460 | xzyao:39503 | denotes | crop productivity |
| T94513 | 891-894 | hunflair:NA:Chemical | denotes | IAA |
| T96720 | 367-376 | hunflair:NA:Gene | denotes | AT4G14790 |
| T3251 | 1015-1019 | hunflair:NA:Chemical | denotes | NaCl |
| T62548 | 660-678 | hunflair:NA:Species | denotes | OsSUV3 rice plants |
| T13490 | 1241-1259 | hunflair:NA:Species | denotes | OsSUV3 rice plants |
| T34579 | 337-348 | hunflair:NA:Species | denotes | Arabidopsis |
| T44646 | 869-889 | hunflair:NA:Chemical | denotes | indole-3-acetic acid |
| T44268 | 854-860 | hunflair:NA:Chemical | denotes | zeatin |
| T47231 | 830-846 | hunflair:NA:Chemical | denotes | gibberellic acid |
| T95893 | 0-6 | hunflair:NA:Gene | denotes | OsSUV3 |
| T53039 | 660-666 | hunflair:NA:Gene | denotes | OsSUV3 |
| T31769 | 723-729 | hunflair:NA:Gene | denotes | OsSUV3 |
| T81074 | 1135-1141 | hunflair:NA:Gene | denotes | OsSUV3 |
| T64249 | 1241-1247 | hunflair:NA:Gene | denotes | OsSUV3 |
| M_69 | 217-229 | hunflair:NA:Gene | denotes | RNA helicase |
| M_70 | 500-512 | hunflair:NA:Gene | denotes | RNA helicase |
| M_71 | 167-171 | hunflair:NA:Gene | denotes | SUV3 |
| M_72 | 277-281 | hunflair:NA:Gene | denotes | SUV3 |
| M_73 | 361-365 | hunflair:NA:Gene | denotes | SUV3 |
| M_74 | 474-478 | hunflair:NA:Gene | denotes | SUV3 |
| M_75 | 173-192 | hunflair:NA:Gene | denotes | suppressor of Var 3 |
| M_76 | 18-22 | hunflair:NA:Species | denotes | rice |
| M_77 | 469-473 | hunflair:NA:Species | denotes | rice |
| M_78 | 667-671 | hunflair:NA:Species | denotes | rice |
| M_79 | 745-749 | hunflair:NA:Species | denotes | rice |
| M_80 | 1153-1157 | hunflair:NA:Species | denotes | rice |
| M_81 | 1248-1252 | hunflair:NA:Species | denotes | rice |
| M_82 | 848-851 | hunflair:NA:Chemical | denotes | GA3 |
| M_83 | 167-171 | pubtator:827134:Gene | denotes | SUV3 |
| M_84 | 277-281 | pubtator:827134:Gene | denotes | SUV3 |
| M_85 | 361-365 | pubtator:827134:Gene | denotes | SUV3 |
| M_86 | 474-478 | pubtator:827134:Gene | denotes | SUV3 |
| M_87 | 869-889 | pubtator:MESH:C030737:Chemical | denotes | indole-3-acetic acid |
| M_88 | 854-860 | pubtator:MESH:D015026:Chemical | denotes | zeatin |
| M_89 | 337-348 | pubtator:3702:Species | denotes | Arabidopsis |
| M_90 | 1015-1019 | pubtator:MESH:D012965:Chemical | denotes | NaCl |
| M_91 | 18-22 | pubtator:4530:Species | denotes | rice |
| M_92 | 469-473 | pubtator:4530:Species | denotes | rice |
| M_93 | 667-671 | pubtator:4530:Species | denotes | rice |
| M_94 | 745-749 | pubtator:4530:Species | denotes | rice |
| M_95 | 1153-1157 | pubtator:4530:Species | denotes | rice |
| M_96 | 1248-1252 | pubtator:4530:Species | denotes | rice |
| M_97 | 830-846 | pubtator:MESH:C007842:Chemical | denotes | gibberellic acid |
| M_98 | 891-894 | pubtator:MESH:C068520:Chemical | denotes | IAA |
21k_plant_trait_mention
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| M_0 | 535-541 | funRiceGene:361 | denotes | stress |
| M_1 | 1021-1027 | funRiceGene:361 | denotes | stress |
| M_2 | 1187-1193 | funRiceGene:361 | denotes | stress |
| M_3 | 526-541 | funRiceGene:262, xzyao:3148 | denotes | salinity stress |
| M_4 | 542-551 | funRiceGene:214 | denotes | tolerance |
| M_5 | 830-846 | xzyao:9342 | denotes | gibberellic acid |
| M_6 | 685-689 | funRiceGene:528 | denotes | salt |
| M_7 | 1002-1006 | funRiceGene:528 | denotes | salt |
| M_8 | 1383-1387 | funRiceGene:528 | denotes | salt |
| M_9 | 504-512 | funRiceGene:115 | denotes | helicase |
| M_10 | 905-909 | PO:0009047, funRiceGene:321 | denotes | stem |
| M_11 | 567-581 | funRiceGene:235 | denotes | photosynthesis |
| M_12 | 1397-1403 | WTO:0000021, funRiceGene:221 | denotes | growth |
| M_13 | 1391-1403 | funRiceGene:44, xzyao:2989 | denotes | plant growth |
| M_14 | 535-551 | funRiceGene:287, xzyao:3567 | denotes | stress tolerance |
| M_15 | 1408-1419 | WTO:0000011, funRiceGene:359 | denotes | development |
| M_16 | 526-534 | funRiceGene:375 | denotes | salinity |
| M_17 | 411-421 | PO:0025074, xzyao:10485 | denotes | embryo sac |
| M_18 | 914-918 | PO:0009005, funRiceGene:362 | denotes | root |
| M_19 | 167-171 | hunflair:NA:Gene | denotes | SUV3 |
| M_20 | 277-281 | hunflair:NA:Gene | denotes | SUV3 |
| M_21 | 361-365 | hunflair:NA:Gene | denotes | SUV3 |
| M_22 | 474-478 | hunflair:NA:Gene | denotes | SUV3 |
| M_23 | 891-894 | hunflair:NA:Chemical | denotes | IAA |
| M_24 | 0-6 | hunflair:NA:Gene | denotes | OsSUV3 |
| M_25 | 660-666 | hunflair:NA:Gene | denotes | OsSUV3 |
| M_26 | 723-729 | hunflair:NA:Gene | denotes | OsSUV3 |
| M_27 | 1135-1141 | hunflair:NA:Gene | denotes | OsSUV3 |
| M_28 | 1241-1247 | hunflair:NA:Gene | denotes | OsSUV3 |
| M_29 | 18-22 | hunflair:NA:Species | denotes | rice |
| M_30 | 469-473 | hunflair:NA:Species | denotes | rice |
| M_31 | 667-671 | hunflair:NA:Species | denotes | rice |
| M_32 | 745-749 | hunflair:NA:Species | denotes | rice |
| M_33 | 1153-1157 | hunflair:NA:Species | denotes | rice |
| M_34 | 1248-1252 | hunflair:NA:Species | denotes | rice |
| M_35 | 337-348 | hunflair:NA:Species | denotes | Arabidopsis |
| M_36 | 217-229 | hunflair:NA:Gene | denotes | RNA helicase |
| M_37 | 500-512 | hunflair:NA:Gene | denotes | RNA helicase |
| M_38 | 869-889 | hunflair:NA:Chemical | denotes | indole-3-acetic acid |
| M_39 | 1015-1019 | hunflair:NA:Chemical | denotes | NaCl |
| M_40 | 660-678 | hunflair:NA:Species | denotes | OsSUV3 rice plants |
| M_41 | 1241-1259 | hunflair:NA:Species | denotes | OsSUV3 rice plants |
| M_42 | 367-376 | hunflair:NA:Gene | denotes | AT4G14790 |
| M_43 | 848-851 | hunflair:NA:Chemical | denotes | GA3 |
| M_44 | 173-192 | hunflair:NA:Gene | denotes | suppressor of Var 3 |
| M_45 | 854-860 | hunflair:NA:Chemical | denotes | zeatin |
| M_46 | 830-846 | hunflair:NA:Chemical | denotes | gibberellic acid |
| M_47 | 854-860 | pubtator:MESH:D015026:Chemical | denotes | zeatin |
| M_48 | 337-348 | pubtator:3702:Species | denotes | Arabidopsis |
| M_49 | 869-889 | pubtator:MESH:C030737:Chemical | denotes | indole-3-acetic acid |
| M_50 | 891-894 | pubtator:MESH:C068520:Chemical | denotes | IAA |
| M_51 | 167-171 | pubtator:827134:Gene | denotes | SUV3 |
| M_52 | 277-281 | pubtator:827134:Gene | denotes | SUV3 |
| M_53 | 361-365 | pubtator:827134:Gene | denotes | SUV3 |
| M_54 | 474-478 | pubtator:827134:Gene | denotes | SUV3 |
| M_55 | 18-22 | pubtator:4530:Species | denotes | rice |
| M_56 | 469-473 | pubtator:4530:Species | denotes | rice |
| M_57 | 667-671 | pubtator:4530:Species | denotes | rice |
| M_58 | 745-749 | pubtator:4530:Species | denotes | rice |
| M_59 | 1153-1157 | pubtator:4530:Species | denotes | rice |
| M_60 | 1248-1252 | pubtator:4530:Species | denotes | rice |
| M_61 | 830-846 | pubtator:MESH:C007842:Chemical | denotes | gibberellic acid |
| M_62 | 1015-1019 | pubtator:MESH:D012965:Chemical | denotes | NaCl |
OryzaGP_2022
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 217-229 | http://identifiers.org/oryzabase.gene/15167 | denotes | RNA helicase |
| T2 | 500-512 | http://identifiers.org/oryzabase.gene/15167 | denotes | RNA helicase |
| T3 | 586-597 | http://identifiers.org/oryzabase.gene/20174 | denotes | antioxidant |
OryzaGP_2021_v2
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-6 | http://identifiers.org/oryzabase.gene/13479 | denotes | OsSUV3 |
| T2 | 167-171 | http://identifiers.org/oryzabase.gene/13479 | denotes | SUV3 |
| T3 | 277-281 | http://identifiers.org/oryzabase.gene/13479 | denotes | SUV3 |
| T4 | 361-365 | http://identifiers.org/oryzabase.gene/13479 | denotes | SUV3 |
| T5 | 474-478 | http://identifiers.org/oryzabase.gene/13479 | denotes | SUV3 |
| T6 | 660-666 | http://identifiers.org/oryzabase.gene/13479 | denotes | OsSUV3 |
| T7 | 723-729 | http://identifiers.org/oryzabase.gene/13479 | denotes | OsSUV3 |
| T8 | 848-851 | http://identifiers.org/oryzabase.gene/527 | denotes | GA3 |
| T9 | 1135-1141 | http://identifiers.org/oryzabase.gene/13479 | denotes | OsSUV3 |
| T10 | 1241-1247 | http://identifiers.org/oryzabase.gene/13479 | denotes | OsSUV3 |
| T69718 | 0-6 | http://identifiers.org/rapdb.locus/Os03g0746500 | denotes | OsSUV3 |
| T56836 | 167-171 | http://identifiers.org/rapdb.locus/Os03g0746500 | denotes | SUV3 |
| T26362 | 277-281 | http://identifiers.org/rapdb.locus/Os03g0746500 | denotes | SUV3 |
| T20969 | 361-365 | http://identifiers.org/rapdb.locus/Os03g0746500 | denotes | SUV3 |
| T47571 | 474-478 | http://identifiers.org/rapdb.locus/Os03g0746500 | denotes | SUV3 |
| T37625 | 660-666 | http://identifiers.org/rapdb.locus/Os03g0746500 | denotes | OsSUV3 |
| T19934 | 723-729 | http://identifiers.org/rapdb.locus/Os03g0746500 | denotes | OsSUV3 |
| T52365 | 1135-1141 | http://identifiers.org/rapdb.locus/Os03g0746500 | denotes | OsSUV3 |
| T55568 | 1241-1247 | http://identifiers.org/rapdb.locus/Os03g0746500 | denotes | OsSUV3 |
OryzaGP_2021_FLAIR
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| M_0 | 854-860 | hunflair:NA:Chemical | denotes | zeatin |
| M_1 | 848-851 | hunflair:NA:Chemical | denotes | GA3 |
| M_2 | 0-6 | hunflair:NA:Gene | denotes | OsSUV3 |
| M_3 | 660-666 | hunflair:NA:Gene | denotes | OsSUV3 |
| M_4 | 723-729 | hunflair:NA:Gene | denotes | OsSUV3 |
| M_5 | 1135-1141 | hunflair:NA:Gene | denotes | OsSUV3 |
| M_6 | 1241-1247 | hunflair:NA:Gene | denotes | OsSUV3 |
| M_7 | 173-192 | hunflair:NA:Gene | denotes | suppressor of Var 3 |
| M_8 | 367-376 | hunflair:NA:Gene | denotes | AT4G14790 |
| M_9 | 869-889 | hunflair:NA:Chemical | denotes | indole-3-acetic acid |
| M_10 | 891-894 | hunflair:NA:Chemical | denotes | IAA |
| M_11 | 217-229 | hunflair:NA:Gene | denotes | RNA helicase |
| M_12 | 500-512 | hunflair:NA:Gene | denotes | RNA helicase |
| M_13 | 1015-1019 | hunflair:NA:Chemical | denotes | NaCl |
| M_14 | 18-22 | hunflair:NA:Species | denotes | rice |
| M_15 | 469-473 | hunflair:NA:Species | denotes | rice |
| M_16 | 667-671 | hunflair:NA:Species | denotes | rice |
| M_17 | 745-749 | hunflair:NA:Species | denotes | rice |
| M_18 | 1153-1157 | hunflair:NA:Species | denotes | rice |
| M_19 | 1248-1252 | hunflair:NA:Species | denotes | rice |
| M_20 | 660-678 | hunflair:NA:Species | denotes | OsSUV3 rice plants |
| M_21 | 1241-1259 | hunflair:NA:Species | denotes | OsSUV3 rice plants |
| M_22 | 167-171 | hunflair:NA:Gene | denotes | SUV3 |
| M_23 | 277-281 | hunflair:NA:Gene | denotes | SUV3 |
| M_24 | 361-365 | hunflair:NA:Gene | denotes | SUV3 |
| M_25 | 474-478 | hunflair:NA:Gene | denotes | SUV3 |
| M_26 | 830-846 | hunflair:NA:Chemical | denotes | gibberellic acid |
| M_27 | 337-348 | hunflair:NA:Species | denotes | Arabidopsis |
OryzaGP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-6 | gene | denotes | OsSUV3 |
| T2 | 167-171 | gene | denotes | SUV3 |
| T3 | 173-192 | gene | denotes | suppressor of Var 3 |
| T4 | 217-229 | gene | denotes | RNA helicase |
| T5 | 361-365 | gene | denotes | SUV3 |
| T6 | 474-478 | gene | denotes | SUV3 |
| T7 | 500-512 | gene | denotes | RNA helicase |
| T8 | 1135-1141 | gene | denotes | OsSUV3 |
| T9 | 1241-1247 | gene | denotes | OsSUV3 |
Oryza_sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-150 | Sentence | denotes | OsSUV3 transgenic rice maintains higher endogenous levels of plant hormones that mitigates adverse effects of salinity and sustains crop productivity. |
| T2 | 151-162 | Sentence | denotes | BACKGROUND: |
| T3 | 163-270 | Sentence | denotes | The SUV3 (suppressor of Var 3) gene encodes a DNA and RNA helicase, which is localized in the mitochondria. |
| T4 | 271-323 | Sentence | denotes | Plant SUV3 has not yet been characterized in detail. |
| T5 | 324-434 | Sentence | denotes | However, the Arabidopsis ortholog of SUV3 (AT4G14790) has been shown to be involved in embryo sac development. |
| T6 | 435-608 | Sentence | denotes | Previously, we have reported that rice SUV3 functions as DNA and RNA helicase and provides salinity stress tolerance by maintaining photosynthesis and antioxidant machinery. |
| T7 | 609-697 | Sentence | denotes | Here, we report further analysis of the transgenic OsSUV3 rice plants under salt stress. |
| T8 | 698-707 | Sentence | denotes | FINDINGS: |
| T9 | 708-1038 | Sentence | denotes | The transgenic OsSUV3 overexpressing rice T1 lines showed significantly higher endogenous content of plant hormones viz., gibberellic acid (GA3), zeatin (Z) and indole-3-acetic acid (IAA) in leaf, stem and root as compared to wild-type (WT), vector control (VC) and antisense (AS) plants under salt (200 mM NaCl) stress condition. |
| T10 | 1039-1204 | Sentence | denotes | A similar trend of endogenous plant hormones profile was also reflected in the T2 generation of OsSUV3 transgenic rice under defined parameters and stress condition. |
| T11 | 1205-1217 | Sentence | denotes | CONCLUSIONS: |
| T12 | 1218-1461 | Sentence | denotes | In response to stress, OsSUV3 rice plants maintained plant hormone levels that regulate the expression of several stress-induced genes and reduce adverse effects of salt on plant growth and development and therefore sustains crop productivity. |