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OryzaGP_2021_v2

Id Subject Object Predicate Lexical cue
T1 550-556 http://identifiers.org/oryzabase.gene/8832 denotes OsMEK1
T2 579-585 http://identifiers.org/oryzabase.gene/6224 denotes OsMAP1
T3 640-646 http://identifiers.org/oryzabase.gene/6827 denotes OsMAP2
T4 650-656 http://identifiers.org/oryzabase.gene/9462 denotes OsMAP3
T5 686-692 http://identifiers.org/oryzabase.gene/8832 denotes OsMEK1
T6 803-809 http://identifiers.org/oryzabase.gene/8061 denotes OsCPK8
T7 909-915 http://identifiers.org/oryzabase.gene/8061 denotes OsCPK8
T8 941-947 http://identifiers.org/oryzabase.gene/8061 denotes OsCPK8
T9 975-978 http://identifiers.org/oryzabase.gene/15753 denotes ARF
T10849 550-556 http://identifiers.org/rapdb.locus/Os01g0510100 denotes OsMEK1
T2740 579-585 http://identifiers.org/rapdb.locus/Os03g0285800 denotes OsMAP1
T13840 640-646 http://identifiers.org/rapdb.locus/Os06g0699400 denotes OsMAP2
T15256 650-656 http://identifiers.org/rapdb.locus/Os02g0148100 denotes OsMAP3
T32703 686-692 http://identifiers.org/rapdb.locus/Os01g0510100 denotes OsMEK1
T15342 803-809 http://identifiers.org/rapdb.locus/Os03g0808600 denotes OsCPK8
T90595 909-915 http://identifiers.org/rapdb.locus/Os03g0808600 denotes OsCPK8
T96691 941-947 http://identifiers.org/rapdb.locus/Os03g0808600 denotes OsCPK8
T76893 975-978 http://identifiers.org/rapdb.locus/Os05g0489600 denotes ARF

OryzaGP_2022

Id Subject Object Predicate Lexical cue
T1 43-77 http://identifiers.org/oryzabase.gene/8061 denotes calcium-dependent protein kinase 8
T2 767-801 http://identifiers.org/oryzabase.gene/8061 denotes calcium-dependent protein kinase 8
T3 1152-1166 http://identifiers.org/oryzabase.gene/21903 denotes protein kinase
T4 1152-1166 http://identifiers.org/oryzabase.gene/21900 denotes protein kinase
T5 1152-1166 http://identifiers.org/oryzabase.gene/20466 denotes protein kinase

OryzaGP_2021_FLAIR

Id Subject Object Predicate Lexical cue
M_0 43-77 hunflair:NA:Gene denotes calcium-dependent protein kinase 8
M_1 767-801 hunflair:NA:Gene denotes calcium-dependent protein kinase 8
M_2 975-982 hunflair:NA:Gene denotes ARF-GEF
M_3 165-172 hunflair:NA:Gene denotes kinases
M_4 475-482 hunflair:NA:Gene denotes kinases
M_5 379-383 hunflair:NA:Gene denotes BiFC
M_6 600-604 hunflair:NA:Gene denotes BiFC
M_7 1054-1058 hunflair:NA:Gene denotes BiFC
M_8 803-809 hunflair:NA:Gene denotes OsCPK8
M_9 909-915 hunflair:NA:Gene denotes OsCPK8
M_10 941-947 hunflair:NA:Gene denotes OsCPK8
M_11 987-1012 hunflair:NA:Gene denotes peptidyl prolyl isomerase
M_12 1031-1035 hunflair:NA:Species denotes rice
M_13 650-656 hunflair:NA:Gene denotes OsMAP3
M_14 61-75 hunflair:NA:Gene denotes protein kinase
M_15 785-799 hunflair:NA:Gene denotes protein kinase
M_16 1152-1166 hunflair:NA:Gene denotes protein kinase
M_17 398-414 hunflair:NA:Species denotes Escherichia coli
M_18 157-172 hunflair:NA:Gene denotes Protein kinases
M_19 996-1002 hunflair:NA:Chemical denotes prolyl
M_20 640-646 hunflair:NA:Gene denotes OsMAP2
M_21 43-50 hunflair:NA:Chemical denotes calcium
M_22 767-774 hunflair:NA:Chemical denotes calcium
M_23 550-556 hunflair:NA:Gene denotes OsMEK1
M_24 686-692 hunflair:NA:Gene denotes OsMEK1
M_25 579-585 hunflair:NA:Gene denotes OsMAP1

OryzaGP_2021

Id Subject Object Predicate Lexical cue
T1 43-77 http://identifiers.org/oryzabase.gene/8061 denotes calcium-dependent protein kinase 8
T2 550-556 http://identifiers.org/oryzabase.gene/8832 denotes OsMEK1
T3 579-585 http://identifiers.org/oryzabase.gene/6224 denotes OsMAP1
T4 640-646 http://identifiers.org/oryzabase.gene/6827 denotes OsMAP2
T5 650-656 http://identifiers.org/oryzabase.gene/9462 denotes OsMAP3
T6 686-692 http://identifiers.org/oryzabase.gene/8832 denotes OsMEK1
T7 767-801 http://identifiers.org/oryzabase.gene/8061 denotes calcium-dependent protein kinase 8
T8 803-809 http://identifiers.org/oryzabase.gene/8061 denotes OsCPK8
T9 909-915 http://identifiers.org/oryzabase.gene/8061 denotes OsCPK8
T10 941-947 http://identifiers.org/oryzabase.gene/8061 denotes OsCPK8
T11 975-978 http://identifiers.org/oryzabase.gene/15753 denotes ARF
T12 1152-1166 http://identifiers.org/oryzabase.gene/21903 denotes protein kinase
T13 1152-1166 http://identifiers.org/oryzabase.gene/21900 denotes protein kinase
T14 1152-1166 http://identifiers.org/oryzabase.gene/20466 denotes protein kinase
T15 1152-1166 http://identifiers.org/oryzabase.gene/16112 denotes protein kinase
T1418 43-77 http://identifiers.org/ricegap/LOC_Os03g59390 denotes calcium-dependent protein kinase 8
T729 157-172 http://identifiers.org/ricegap/LOC_Os01g02830 denotes Protein kinases
T29951 550-556 http://identifiers.org/ricegap/LOC_Os01g32660 denotes OsMEK1
T90850 579-585 http://identifiers.org/ricegap/LOC_Os03g17700 denotes OsMAP1
T8984 640-646 http://identifiers.org/ricegap/LOC_Os06g48590 denotes OsMAP2
T26139 650-656 http://identifiers.org/ricegap/LOC_Os02g05480 denotes OsMAP3
T1381 686-692 http://identifiers.org/ricegap/LOC_Os01g32660 denotes OsMEK1
T60284 767-801 http://identifiers.org/ricegap/LOC_Os03g59390 denotes calcium-dependent protein kinase 8
T60492 803-809 http://identifiers.org/ricegap/LOC_Os03g59390 denotes OsCPK8
T6250 909-915 http://identifiers.org/ricegap/LOC_Os03g59390 denotes OsCPK8
T82615 941-947 http://identifiers.org/ricegap/LOC_Os03g59390 denotes OsCPK8
T44565 975-978 http://identifiers.org/ricegap/LOC_Os05g41060 denotes ARF
T5840 1152-1166 http://identifiers.org/ricegap/LOC_Os07g04820 denotes protein kinase
T91231 1152-1166 http://identifiers.org/ricegap/LOC_Os06g18000 denotes protein kinase
T72968 1152-1166 http://identifiers.org/ricegap/LOC_Os06g13320 denotes protein kinase
T16 1152-1166 http://identifiers.org/ricegap/LOC_Os01g02830 denotes protein kinase
T37385 43-77 http://identifiers.org/rapdb.locus/Os03g0808600 denotes calcium-dependent protein kinase 8
T28688 157-172 http://identifiers.org/rapdb.locus/Os01g0117600 denotes Protein kinases
T76890 550-556 http://identifiers.org/rapdb.locus/Os01g0510100 denotes OsMEK1
T53467 579-585 http://identifiers.org/rapdb.locus/Os03g0285800 denotes OsMAP1
T4084 640-646 http://identifiers.org/rapdb.locus/Os06g0699400 denotes OsMAP2
T73942 650-656 http://identifiers.org/rapdb.locus/Os02g0148100 denotes OsMAP3
T36969 686-692 http://identifiers.org/rapdb.locus/Os01g0510100 denotes OsMEK1
T98338 767-801 http://identifiers.org/rapdb.locus/Os03g0808600 denotes calcium-dependent protein kinase 8
T50769 803-809 http://identifiers.org/rapdb.locus/Os03g0808600 denotes OsCPK8
T89685 909-915 http://identifiers.org/rapdb.locus/Os03g0808600 denotes OsCPK8
T12686 941-947 http://identifiers.org/rapdb.locus/Os03g0808600 denotes OsCPK8
T28811 975-978 http://identifiers.org/rapdb.locus/Os05g0489600 denotes ARF
T82560 1152-1166 http://identifiers.org/rapdb.locus/Os06g0288100 denotes protein kinase
T36787 1152-1166 http://identifiers.org/rapdb.locus/Os06g0241100 denotes protein kinase
T71171 1152-1166 http://identifiers.org/rapdb.locus/Os01g0117600 denotes protein kinase
T35206 43-75 http://identifiers.org/uniprot/Q7XSQ5 denotes calcium-dependent protein kinase
T9205 43-75 http://identifiers.org/uniprot/Q7XIM0 denotes calcium-dependent protein kinase
T85995 43-75 http://identifiers.org/uniprot/Q6ZIU9 denotes calcium-dependent protein kinase
T75883 43-75 http://identifiers.org/uniprot/Q6YIH2 denotes calcium-dependent protein kinase
T75541 43-75 http://identifiers.org/uniprot/Q6F3A6 denotes calcium-dependent protein kinase
T97478 43-75 http://identifiers.org/uniprot/Q6F339 denotes calcium-dependent protein kinase
T4779 43-75 http://identifiers.org/uniprot/Q6AVI8 denotes calcium-dependent protein kinase
T75260 43-75 http://identifiers.org/uniprot/Q53P85 denotes calcium-dependent protein kinase
T85738 43-75 http://identifiers.org/uniprot/Q41793 denotes calcium-dependent protein kinase
T31738 43-75 http://identifiers.org/uniprot/Q336J4 denotes calcium-dependent protein kinase
T70784 43-75 http://identifiers.org/uniprot/Q10KY3 denotes calcium-dependent protein kinase
T3171 43-75 http://identifiers.org/uniprot/P53683 denotes calcium-dependent protein kinase
T29830 43-75 http://identifiers.org/uniprot/B7EKH2 denotes calcium-dependent protein kinase
T31785 43-75 http://identifiers.org/uniprot/B6SXT4 denotes calcium-dependent protein kinase
T95236 43-75 http://identifiers.org/uniprot/B6SKK9 denotes calcium-dependent protein kinase
T5593 43-75 http://identifiers.org/uniprot/B3GN93 denotes calcium-dependent protein kinase
T17 43-75 http://identifiers.org/uniprot/B2KTB3 denotes calcium-dependent protein kinase
T18 43-75 http://identifiers.org/uniprot/B2KTA8 denotes calcium-dependent protein kinase
T19 43-75 http://identifiers.org/uniprot/B2KTA1 denotes calcium-dependent protein kinase
T20 43-75 http://identifiers.org/uniprot/B2KTA0 denotes calcium-dependent protein kinase
T21 43-75 http://identifiers.org/uniprot/A2ZVI7 denotes calcium-dependent protein kinase
T22 43-75 http://identifiers.org/refseq/NP_001170479.1 denotes calcium-dependent protein kinase
T23 550-556 http://identifiers.org/uniprot/Q5QN75 denotes OsMEK1
T24 579-585 http://identifiers.org/uniprot/Q10N20 denotes OsMAP1
T25 640-646 http://identifiers.org/uniprot/Q5Z859 denotes OsMAP2
T26 650-656 http://identifiers.org/uniprot/Q6Z437 denotes OsMAP3
T27 686-692 http://identifiers.org/uniprot/Q5QN75 denotes OsMEK1
T28 767-799 http://identifiers.org/uniprot/Q7XSQ5 denotes calcium-dependent protein kinase
T29 767-799 http://identifiers.org/uniprot/Q7XIM0 denotes calcium-dependent protein kinase
T30 767-799 http://identifiers.org/uniprot/Q6ZIU9 denotes calcium-dependent protein kinase
T31 767-799 http://identifiers.org/uniprot/Q6YIH2 denotes calcium-dependent protein kinase
T32 767-799 http://identifiers.org/uniprot/Q6F3A6 denotes calcium-dependent protein kinase
T33 767-799 http://identifiers.org/uniprot/Q6F339 denotes calcium-dependent protein kinase
T34 767-799 http://identifiers.org/uniprot/Q6AVI8 denotes calcium-dependent protein kinase
T35 767-799 http://identifiers.org/uniprot/Q53P85 denotes calcium-dependent protein kinase
T36 767-799 http://identifiers.org/uniprot/Q41793 denotes calcium-dependent protein kinase
T37 767-799 http://identifiers.org/uniprot/Q336J4 denotes calcium-dependent protein kinase
T38 767-799 http://identifiers.org/uniprot/Q10KY3 denotes calcium-dependent protein kinase
T39 767-799 http://identifiers.org/uniprot/P53683 denotes calcium-dependent protein kinase
T40 767-799 http://identifiers.org/uniprot/B7EKH2 denotes calcium-dependent protein kinase
T41 767-799 http://identifiers.org/uniprot/B6SXT4 denotes calcium-dependent protein kinase
T42 767-799 http://identifiers.org/uniprot/B6SKK9 denotes calcium-dependent protein kinase
T43 767-799 http://identifiers.org/uniprot/B3GN93 denotes calcium-dependent protein kinase
T44 767-799 http://identifiers.org/uniprot/B2KTB3 denotes calcium-dependent protein kinase
T45 767-799 http://identifiers.org/uniprot/B2KTA8 denotes calcium-dependent protein kinase
T46 767-799 http://identifiers.org/uniprot/B2KTA1 denotes calcium-dependent protein kinase
T47 767-799 http://identifiers.org/uniprot/B2KTA0 denotes calcium-dependent protein kinase
T48 767-799 http://identifiers.org/uniprot/A2ZVI7 denotes calcium-dependent protein kinase
T49 767-799 http://identifiers.org/refseq/NP_001170479.1 denotes calcium-dependent protein kinase
T50 803-809 http://identifiers.org/uniprot/B6SXT4 denotes OsCPK8
T51 909-915 http://identifiers.org/uniprot/B6SXT4 denotes OsCPK8
T52 941-947 http://identifiers.org/uniprot/B6SXT4 denotes OsCPK8
T53 975-978 http://identifiers.org/uniprot/Q76ME3 denotes ARF
T54 1152-1166 http://identifiers.org/uniprot/Q01KM0 denotes protein kinase
T55 1152-1166 http://identifiers.org/uniprot/A1XFD8 denotes protein kinase
M_0 43-77 hunflair:NA:Gene denotes calcium-dependent protein kinase 8
M_1 767-801 hunflair:NA:Gene denotes calcium-dependent protein kinase 8
M_2 975-982 hunflair:NA:Gene denotes ARF-GEF
M_3 165-172 hunflair:NA:Gene denotes kinases
M_4 475-482 hunflair:NA:Gene denotes kinases
M_5 379-383 hunflair:NA:Gene denotes BiFC
M_6 600-604 hunflair:NA:Gene denotes BiFC
M_7 1054-1058 hunflair:NA:Gene denotes BiFC
M_8 803-809 hunflair:NA:Gene denotes OsCPK8
M_9 909-915 hunflair:NA:Gene denotes OsCPK8
M_10 941-947 hunflair:NA:Gene denotes OsCPK8
M_11 987-1012 hunflair:NA:Gene denotes peptidyl prolyl isomerase
M_12 1031-1035 hunflair:NA:Species denotes rice
M_13 650-656 hunflair:NA:Gene denotes OsMAP3
M_14 61-75 hunflair:NA:Gene denotes protein kinase
M_15 785-799 hunflair:NA:Gene denotes protein kinase
M_16 1152-1166 hunflair:NA:Gene denotes protein kinase
M_17 398-414 hunflair:NA:Species denotes Escherichia coli
M_18 157-172 hunflair:NA:Gene denotes Protein kinases
M_19 996-1002 hunflair:NA:Chemical denotes prolyl
M_20 640-646 hunflair:NA:Gene denotes OsMAP2
M_21 43-50 hunflair:NA:Chemical denotes calcium
M_22 767-774 hunflair:NA:Chemical denotes calcium
M_23 550-556 hunflair:NA:Gene denotes OsMEK1
M_24 686-692 hunflair:NA:Gene denotes OsMEK1
M_25 579-585 hunflair:NA:Gene denotes OsMAP1

Allie

Id Subject Object Predicate Lexical cue
SS1_25036830_2_0 337-377 expanded denotes bimolecular fluorescence complementation
SS2_25036830_2_0 379-383 abbr denotes BiFC
AE1_25036830_2_0 SS1_25036830_2_0 SS2_25036830_2_0 abbreviatedTo bimolecular fluorescence complementation,BiFC

OryzaGP

Id Subject Object Predicate Lexical cue
T1 61-75 gene denotes protein kinase
T2 550-556 gene denotes OsMEK1
T3 579-585 gene denotes OsMAP1
T4 785-799 gene denotes protein kinase
T5 803-809 gene denotes OsCPK8
T6 909-915 gene denotes OsCPK8
T7 941-947 gene denotes OsCPK8
T8 1152-1166 gene denotes protein kinase

Oryza_sentences

Id Subject Object Predicate Lexical cue
T1 0-156 Sentence denotes Identification of interacting proteins for calcium-dependent protein kinase 8 by a novel screening system based on bimolecular fluorescence complementation.
T2 157-288 Sentence denotes Protein kinases are key regulators of cell function that constitute one of the largest and most functionally diverse gene families.
T3 289-504 Sentence denotes We developed a novel assay system, based on the bimolecular fluorescence complementation (BiFC) technique in Escherichia coli, for detecting transient interactions such as those between kinases and their substrates.
T4 505-586 Sentence denotes This system detected the interaction between OsMEK1 and its direct target OsMAP1.
T5 587-721 Sentence denotes By contrast, BiFC fluorescence was not observed when OsMAP2 or OsMAP3, which are not substrates of OsMEK1, were used as prey proteins.
T6 722-916 Sentence denotes We also screened for interacting proteins of calcium-dependent protein kinase 8 (OsCPK8), a regulator of plant immune responses, and identified three proteins as interacting molecules of OsCPK8.
T7 917-1070 Sentence denotes The interaction between OsCPK8 and two of these proteins (ARF-GEF and peptidyl prolyl isomerase) was confirmed in rice cells by means of BiFC technology.
T8 1071-1184 Sentence denotes These results indicate that our new assay system has the potential to screen for protein kinase target molecules.