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Allie

Id Subject Object Predicate Lexical cue
SS1_25001059_4_0 424-435 expanded denotes chloroplast
SS2_25001059_4_0 437-439 abbr denotes cp
AE1_25001059_4_0 SS1_25001059_4_0 SS2_25001059_4_0 abbreviatedTo chloroplast,cp

OryzaGP

Id Subject Object Predicate Lexical cue
T1 150-638 gene denotes Camellia is an economically and phylogenetically important genus in the family Theaceae. Owing to numerous hybridization and polyploidization, it is taxonomically and phylogenetically ranked as one of the most challengingly difficult taxa in plants. Sequence comparisons of chloroplast (cp) genomes are of great interest to provide a robust evidence for taxonomic studies, species identification and understanding mechanisms that underlie the evolution of the Camellia species. RESULTS: T

Oryza_sentences

Id Subject Object Predicate Lexical cue
T1 0-137 Sentence denotes Thirteen Camellia chloroplast genome sequences determined by high-throughput sequencing: genome structure and phylogenetic relationships.
T2 138-149 Sentence denotes BACKGROUND:
T3 150-399 Sentence denotes Camellia is an economically and phylogenetically important genus in the family Theaceae. Owing to numerous hybridization and polyploidization, it is taxonomically and phylogenetically ranked as one of the most challengingly difficult taxa in plants.
T4 400-627 Sentence denotes Sequence comparisons of chloroplast (cp) genomes are of great interest to provide a robust evidence for taxonomic studies, species identification and understanding mechanisms that underlie the evolution of the Camellia species.
T5 628-636 Sentence denotes RESULTS:
T6 637-840 Sentence denotes The eight complete cp genomes and five draft cp genome sequences of Camellia species were determined using Illumina sequencing technology via a combined strategy of de novo and reference-guided assembly.
T7 841-979 Sentence denotes The Camellia cp genomes exhibited typical circular structure that was rather conserved in genomic structure and the synteny of gene order.
T8 980-1173 Sentence denotes Differences of repeat sequences, simple sequence repeats, indels and substitutions were further examined among five complete cp genomes, representing a wide phylogenetic diversity in the genus.
T9 1174-1509 Sentence denotes A total of fifteen molecular markers were identified with more than 1.5% sequence divergence that may be useful for further phylogenetic analysis and species identification of Camellia. Our results showed that, rather than functional constrains, it is the regional constraints that strongly affect sequence evolution of the cp genomes.
T10 1510-1679 Sentence denotes In a substantial improvement over prior studies, evolutionary relationships of the section Thea were determined on basis of phylogenomic analyses of cp genome sequences.
T11 1680-1692 Sentence denotes CONCLUSIONS:
T12 1693-1878 Sentence denotes Despite a high degree of conservation between the Camellia cp genomes, sequence variation among species could still be detected, representing a wide phylogenetic diversity in the genus.
T13 1879-2009 Sentence denotes Furthermore, phylogenomic analysis was conducted using 18 complete cp genomes and 5 draft cp genome sequences of Camellia species.
T14 2010-2106 Sentence denotes Our results support Chang's taxonomical treatment that C. pubicosta may be classified into sect.
T15 2107-2235 Sentence denotes Thea, and indicate that taxonomical value of the number of ovaries should be reconsidered when classifying the Camellia species.
T16 2236-2422 Sentence denotes The availability of these cp genomes provides valuable genetic information for accurately identifying species, clarifying taxonomy and reconstructing the phylogeny of the genus Camellia.