PubMed:2484027 JSONTXT

Annnotations TAB JSON ListView MergeView

{"target":"https://pubannotation.org/docs/sourcedb/PubMed/sourceid/2484027","sourcedb":"PubMed","sourceid":"2484027","source_url":"http://www.ncbi.nlm.nih.gov/pubmed/2484027","text":"Substrate recognition by UDP-N-acetyl-alpha-D-galactosamine: polypeptide n-acetyl-alpha-D-galactosaminyltransferase. Effects of chain length and disulphide bonding of synthetic peptide substrates.\nA synthetic peptide AcTPPP, based on a threonine-containing sequence present in bovine myelin basic protein, is a potent acceptor of glycosyl transfer from UDP-N-acetylgalactosamine catalyzed by extracts of baby hamster kidney (BHK) cells or rabbit lymph node tissue. In contrast, the disulphide-linked peptide (AcTCPPP)2, based on a glycosylated sequence present in the hinge region of rabbit immunoglobulin G, is not an acceptor and inhibits glycosylation of AcTPPP. Extension of the cystine-containing peptide at the N-terminus produced weak acceptors but strong acceptors resulted when the cystine residue was reduced to form monomeric peptides. The acceptor specificity of the N-acetylgalactosaminyl-transferase activity of BHK cells is very similar to that of rabbit lymph node tissue. The results indicated that tissues actively secreting immunoglobulin do not contain a transferase activity adapted specifically for glycosylation of sequences containing cystine residues, and suggested that addition of an N-acetylgalactosamine to a threonine residue in the hinge region of rabbit immunoglobulin takes place during biosynthesis prior to the formation of the inter-chain disulphide bridge of fully assembled immunoglobulins.","tracks":[{"project":"sentences","denotations":[{"id":"TextSentencer_T1","span":{"begin":0,"end":116},"obj":"Sentence"},{"id":"TextSentencer_T2","span":{"begin":117,"end":196},"obj":"Sentence"},{"id":"TextSentencer_T3","span":{"begin":197,"end":464},"obj":"Sentence"},{"id":"TextSentencer_T4","span":{"begin":465,"end":665},"obj":"Sentence"},{"id":"TextSentencer_T5","span":{"begin":666,"end":846},"obj":"Sentence"},{"id":"TextSentencer_T6","span":{"begin":847,"end":988},"obj":"Sentence"},{"id":"TextSentencer_T7","span":{"begin":989,"end":1428},"obj":"Sentence"},{"id":"T1","span":{"begin":0,"end":116},"obj":"Sentence"},{"id":"T2","span":{"begin":117,"end":196},"obj":"Sentence"},{"id":"T3","span":{"begin":197,"end":464},"obj":"Sentence"},{"id":"T4","span":{"begin":465,"end":665},"obj":"Sentence"},{"id":"T5","span":{"begin":666,"end":846},"obj":"Sentence"},{"id":"T6","span":{"begin":847,"end":988},"obj":"Sentence"},{"id":"T7","span":{"begin":989,"end":1428},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"TextSentencer_T1","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T2","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T3","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T4","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T5","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T6","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T7","pred":"source","obj":"sentences"},{"subj":"T1","pred":"source","obj":"sentences"},{"subj":"T2","pred":"source","obj":"sentences"},{"subj":"T3","pred":"source","obj":"sentences"},{"subj":"T4","pred":"source","obj":"sentences"},{"subj":"T5","pred":"source","obj":"sentences"},{"subj":"T6","pred":"source","obj":"sentences"},{"subj":"T7","pred":"source","obj":"sentences"}]},{"project":"NCBITAXON","denotations":[{"id":"T1","span":{"begin":277,"end":283},"obj":"OrganismTaxon"}],"attributes":[{"id":"A1","pred":"db_id","subj":"T1","obj":"9913"},{"subj":"T1","pred":"source","obj":"NCBITAXON"}]},{"project":"GlyCosmos6-Glycan-Motif-Structure","denotations":[{"id":"T1","span":{"begin":357,"end":378},"obj":"https://glytoucan.org/Structures/Glycans/G27025MB"},{"id":"T2","span":{"begin":1211,"end":1232},"obj":"https://glytoucan.org/Structures/Glycans/G27025MB"}],"attributes":[{"subj":"T1","pred":"source","obj":"GlyCosmos6-Glycan-Motif-Structure"},{"subj":"T2","pred":"source","obj":"GlyCosmos6-Glycan-Motif-Structure"}]},{"project":"Glycosmos6-MAT","denotations":[{"id":"T1","span":{"begin":417,"end":423},"obj":"http://purl.obolibrary.org/obo/MAT_0000119"},{"id":"T2","span":{"begin":446,"end":456},"obj":"http://purl.obolibrary.org/obo/MAT_0000197"},{"id":"T3","span":{"begin":446,"end":456},"obj":"http://purl.obolibrary.org/obo/MAT_0000442"},{"id":"T4","span":{"begin":446,"end":451},"obj":"http://purl.obolibrary.org/obo/MAT_0000055"},{"id":"T5","span":{"begin":970,"end":980},"obj":"http://purl.obolibrary.org/obo/MAT_0000197"},{"id":"T6","span":{"begin":970,"end":980},"obj":"http://purl.obolibrary.org/obo/MAT_0000442"},{"id":"T7","span":{"begin":970,"end":975},"obj":"http://purl.obolibrary.org/obo/MAT_0000055"}],"attributes":[{"subj":"T1","pred":"source","obj":"Glycosmos6-MAT"},{"subj":"T2","pred":"source","obj":"Glycosmos6-MAT"},{"subj":"T3","pred":"source","obj":"Glycosmos6-MAT"},{"subj":"T4","pred":"source","obj":"Glycosmos6-MAT"},{"subj":"T5","pred":"source","obj":"Glycosmos6-MAT"},{"subj":"T6","pred":"source","obj":"Glycosmos6-MAT"},{"subj":"T7","pred":"source","obj":"Glycosmos6-MAT"}]},{"project":"GlyCosmos6-Glycan-Motif-Image","denotations":[{"id":"T1","span":{"begin":357,"end":378},"obj":"Glycan_Motif"},{"id":"T2","span":{"begin":1211,"end":1232},"obj":"Glycan_Motif"}],"attributes":[{"id":"A1","pred":"image","subj":"T1","obj":"https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G27025MB"},{"id":"A2","pred":"image","subj":"T2","obj":"https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G27025MB"},{"subj":"T1","pred":"source","obj":"GlyCosmos6-Glycan-Motif-Image"},{"subj":"T2","pred":"source","obj":"GlyCosmos6-Glycan-Motif-Image"}]},{"project":"Anatomy-MAT","denotations":[{"id":"T1","span":{"begin":417,"end":423},"obj":"Body_part"},{"id":"T2","span":{"begin":446,"end":456},"obj":"Body_part"},{"id":"T4","span":{"begin":970,"end":980},"obj":"Body_part"}],"attributes":[{"id":"A1","pred":"mat_id","subj":"T1","obj":"http://purl.obolibrary.org/obo/MAT_0000119"},{"id":"A2","pred":"mat_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/MAT_0000197"},{"id":"A3","pred":"mat_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/MAT_0000442"},{"id":"A4","pred":"mat_id","subj":"T4","obj":"http://purl.obolibrary.org/obo/MAT_0000197"},{"id":"A5","pred":"mat_id","subj":"T4","obj":"http://purl.obolibrary.org/obo/MAT_0000442"},{"subj":"T1","pred":"source","obj":"Anatomy-MAT"},{"subj":"T2","pred":"source","obj":"Anatomy-MAT"},{"subj":"T4","pred":"source","obj":"Anatomy-MAT"}]},{"project":"Anatomy-UBERON","denotations":[{"id":"T1","span":{"begin":284,"end":290},"obj":"Body_part"},{"id":"T2","span":{"begin":417,"end":423},"obj":"Body_part"},{"id":"T3","span":{"begin":446,"end":456},"obj":"Body_part"},{"id":"T4","span":{"begin":457,"end":463},"obj":"Body_part"},{"id":"T5","span":{"begin":666,"end":675},"obj":"Body_part"},{"id":"T6","span":{"begin":970,"end":980},"obj":"Body_part"},{"id":"T7","span":{"begin":981,"end":987},"obj":"Body_part"}],"attributes":[{"id":"A1","pred":"uberon_id","subj":"T1","obj":"http://purl.obolibrary.org/obo/UBERON_0000345"},{"id":"A2","pred":"uberon_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/UBERON_0002113"},{"id":"A3","pred":"uberon_id","subj":"T3","obj":"http://purl.obolibrary.org/obo/UBERON_0000029"},{"id":"A4","pred":"uberon_id","subj":"T4","obj":"http://purl.obolibrary.org/obo/UBERON_0000479"},{"id":"A5","pred":"uberon_id","subj":"T5","obj":"http://purl.obolibrary.org/obo/UBERON_2000106"},{"id":"A6","pred":"uberon_id","subj":"T6","obj":"http://purl.obolibrary.org/obo/UBERON_0000029"},{"id":"A7","pred":"uberon_id","subj":"T7","obj":"http://purl.obolibrary.org/obo/UBERON_0000479"},{"subj":"T1","pred":"source","obj":"Anatomy-UBERON"},{"subj":"T2","pred":"source","obj":"Anatomy-UBERON"},{"subj":"T3","pred":"source","obj":"Anatomy-UBERON"},{"subj":"T4","pred":"source","obj":"Anatomy-UBERON"},{"subj":"T5","pred":"source","obj":"Anatomy-UBERON"},{"subj":"T6","pred":"source","obj":"Anatomy-UBERON"},{"subj":"T7","pred":"source","obj":"Anatomy-UBERON"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"sentences","color":"#ecd793","default":true},{"id":"NCBITAXON","color":"#bd93ec"},{"id":"GlyCosmos6-Glycan-Motif-Structure","color":"#93eca3"},{"id":"Glycosmos6-MAT","color":"#ec939c"},{"id":"GlyCosmos6-Glycan-Motif-Image","color":"#93b6ec"},{"id":"Anatomy-MAT","color":"#d0ec93"},{"id":"Anatomy-UBERON","color":"#ec93ea"}]}]}}