PubMed:24385136
Annnotations
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| TextSentencer_T1 | 0-77 | Sentence | denotes | TMEM106B protects C9ORF72 expansion carriers against frontotemporal dementia. |
| TextSentencer_T2 | 78-235 | Sentence | denotes | Variants in transmembrane protein 106 B (TMEM106B) modify the disease penetrance of frontotemporal dementia (FTD) in carriers of progranulin (GRN) mutations. |
| TextSentencer_T3 | 236-378 | Sentence | denotes | We investigated whether TMEM106B is also a genetic modifier of disease in carriers of chromosome 9 open reading frame 72 (C9ORF72) expansions. |
| TextSentencer_T4 | 379-679 | Sentence | denotes | We assessed the genotype of 325 C9ORF72 expansion carriers (cohort 1), 586 FTD patients lacking C9ORF72 expansions [with or without motor neuron disease (MND); cohort 2], and a total of 1,302 controls for TMEM106B variants (rs3173615 and rs1990622) using MassArray iPLEX and Taqman genotyping assays. |
| TextSentencer_T5 | 680-791 | Sentence | denotes | For our primary analysis, we focused on functional variant rs3173615, and employed a recessive genotypic model. |
| TextSentencer_T6 | 792-1043 | Sentence | denotes | In cohort 1, patients with C9ORF72 expansions showed a significantly reduced frequency of carriers homozygous for the minor allele as compared to controls [11.9 vs. 19.1 %, odds ratio (OR) 0.57, p = 0.014; same direction as carriers of GRN mutations]. |
| TextSentencer_T7 | 1044-1251 | Sentence | denotes | The strongest evidence was provided by FTD patients (OR 0.33, p = 0.009) followed by FTD/MND patients (OR 0.38, p = 0.017), whereas no significant difference was observed in MND patients (OR 0.85, p = 0.55). |
| TextSentencer_T8 | 1252-1601 | Sentence | denotes | In cohort 2, the frequency of carriers homozygous for the minor allele was not significantly reduced in patients as compared to controls (OR 0.77, p = 0.079); however, a significant reduction was observed when focusing on those patients with frontotemporal lobar degeneration and TAR DNA-binding protein 43 inclusions (FTLD-TDP; OR 0.26, p < 0.001). |
| TextSentencer_T9 | 1602-1721 | Sentence | denotes | Our study identifies TMEM106B as the first genetic factor modifying disease presentation in C9ORF72 expansion carriers. |
| TextSentencer_T10 | 1722-1902 | Sentence | denotes | Homozygosity for the minor allele protects carriers from developing FTD, but not from developing MND; similar effects are seen in FTLD-TDP patients with yet unknown genetic causes. |
| TextSentencer_T11 | 1903-2133 | Sentence | denotes | These new findings show that the protective effects of TMEM106B are not confined to carriers of GRN mutations and might be relevant for prognostic testing, and as a promising therapeutic target for the entire spectrum of FTLD-TDP. |
| T1 | 0-77 | Sentence | denotes | TMEM106B protects C9ORF72 expansion carriers against frontotemporal dementia. |
| T2 | 78-235 | Sentence | denotes | Variants in transmembrane protein 106 B (TMEM106B) modify the disease penetrance of frontotemporal dementia (FTD) in carriers of progranulin (GRN) mutations. |
| T3 | 236-378 | Sentence | denotes | We investigated whether TMEM106B is also a genetic modifier of disease in carriers of chromosome 9 open reading frame 72 (C9ORF72) expansions. |
| T4 | 379-679 | Sentence | denotes | We assessed the genotype of 325 C9ORF72 expansion carriers (cohort 1), 586 FTD patients lacking C9ORF72 expansions [with or without motor neuron disease (MND); cohort 2], and a total of 1,302 controls for TMEM106B variants (rs3173615 and rs1990622) using MassArray iPLEX and Taqman genotyping assays. |
| T5 | 680-791 | Sentence | denotes | For our primary analysis, we focused on functional variant rs3173615, and employed a recessive genotypic model. |
| T6 | 792-1043 | Sentence | denotes | In cohort 1, patients with C9ORF72 expansions showed a significantly reduced frequency of carriers homozygous for the minor allele as compared to controls [11.9 vs. 19.1 %, odds ratio (OR) 0.57, p = 0.014; same direction as carriers of GRN mutations]. |
| T7 | 1044-1251 | Sentence | denotes | The strongest evidence was provided by FTD patients (OR 0.33, p = 0.009) followed by FTD/MND patients (OR 0.38, p = 0.017), whereas no significant difference was observed in MND patients (OR 0.85, p = 0.55). |
| T8 | 1252-1601 | Sentence | denotes | In cohort 2, the frequency of carriers homozygous for the minor allele was not significantly reduced in patients as compared to controls (OR 0.77, p = 0.079); however, a significant reduction was observed when focusing on those patients with frontotemporal lobar degeneration and TAR DNA-binding protein 43 inclusions (FTLD-TDP; OR 0.26, p < 0.001). |
| T9 | 1602-1721 | Sentence | denotes | Our study identifies TMEM106B as the first genetic factor modifying disease presentation in C9ORF72 expansion carriers. |
| T10 | 1722-1902 | Sentence | denotes | Homozygosity for the minor allele protects carriers from developing FTD, but not from developing MND; similar effects are seen in FTLD-TDP patients with yet unknown genetic causes. |
| T11 | 1903-2133 | Sentence | denotes | These new findings show that the protective effects of TMEM106B are not confined to carriers of GRN mutations and might be relevant for prognostic testing, and as a promising therapeutic target for the entire spectrum of FTLD-TDP. |
DisGeNET
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T0 | 18-25 | gene:203228 | denotes | C9ORF72 |
| T1 | 53-76 | disease:C0338451 | denotes | frontotemporal dementia |
| T2 | 18-25 | gene:203228 | denotes | C9ORF72 |
| T3 | 53-76 | disease:C0236642 | denotes | frontotemporal dementia |
| T4 | 0-8 | gene:54664 | denotes | TMEM106B |
| T5 | 53-76 | disease:C0338451 | denotes | frontotemporal dementia |
| T6 | 0-8 | gene:54664 | denotes | TMEM106B |
| T7 | 53-76 | disease:C0236642 | denotes | frontotemporal dementia |
| T8 | 119-127 | gene:54664 | denotes | TMEM106B |
| T9 | 162-185 | disease:C0338451 | denotes | frontotemporal dementia |
| T10 | 90-117 | gene:54664 | denotes | transmembrane protein 106 B |
| T11 | 162-185 | disease:C0338451 | denotes | frontotemporal dementia |
| T12 | 90-117 | gene:54664 | denotes | transmembrane protein 106 B |
| T13 | 162-185 | disease:C0236642 | denotes | frontotemporal dementia |
| T14 | 90-117 | gene:54664 | denotes | transmembrane protein 106 B |
| T15 | 187-190 | disease:C0338451 | denotes | FTD |
| T16 | 90-117 | gene:54664 | denotes | transmembrane protein 106 B |
| T17 | 187-190 | disease:C0236642 | denotes | FTD |
| T18 | 220-223 | gene:2896 | denotes | GRN |
| T19 | 187-190 | disease:C0236642 | denotes | FTD |
| T20 | 119-127 | gene:54664 | denotes | TMEM106B |
| T21 | 162-185 | disease:C0236642 | denotes | frontotemporal dementia |
| T22 | 119-127 | gene:54664 | denotes | TMEM106B |
| T23 | 187-190 | disease:C0338451 | denotes | FTD |
| T24 | 220-223 | gene:2896 | denotes | GRN |
| T25 | 187-190 | disease:C0338451 | denotes | FTD |
| T26 | 207-218 | gene:2896 | denotes | progranulin |
| T27 | 162-185 | disease:C0338451 | denotes | frontotemporal dementia |
| T28 | 207-218 | gene:2896 | denotes | progranulin |
| T29 | 162-185 | disease:C0236642 | denotes | frontotemporal dementia |
| T30 | 207-218 | gene:2896 | denotes | progranulin |
| T31 | 187-190 | disease:C0338451 | denotes | FTD |
| T32 | 207-218 | gene:2896 | denotes | progranulin |
| T33 | 187-190 | disease:C0236642 | denotes | FTD |
| T34 | 220-223 | gene:2896 | denotes | GRN |
| T35 | 162-185 | disease:C0338451 | denotes | frontotemporal dementia |
| T36 | 220-223 | gene:2896 | denotes | GRN |
| T37 | 162-185 | disease:C0236642 | denotes | frontotemporal dementia |
| T38 | 119-127 | gene:54664 | denotes | TMEM106B |
| T39 | 187-190 | disease:C0236642 | denotes | FTD |
| T40 | 584-592 | gene:54664 | denotes | TMEM106B |
| T41 | 533-536 | disease:C0085084 | denotes | MND |
| T42 | 584-592 | gene:54664 | denotes | TMEM106B |
| T43 | 511-531 | disease:C0085084 | denotes | motor neuron disease |
| T44 | 475-482 | gene:203228 | denotes | C9ORF72 |
| T45 | 533-536 | disease:C0085084 | denotes | MND |
| T46 | 475-482 | gene:203228 | denotes | C9ORF72 |
| T47 | 511-531 | disease:C0085084 | denotes | motor neuron disease |
| T48 | 411-418 | gene:203228 | denotes | C9ORF72 |
| T49 | 511-531 | disease:C0085084 | denotes | motor neuron disease |
| R1 | T0 | T1 | associated_with | C9ORF72,frontotemporal dementia |
| R2 | T2 | T3 | associated_with | C9ORF72,frontotemporal dementia |
| R3 | T4 | T5 | associated_with | TMEM106B,frontotemporal dementia |
| R4 | T6 | T7 | associated_with | TMEM106B,frontotemporal dementia |
| R5 | T8 | T9 | associated_with | TMEM106B,frontotemporal dementia |
| R6 | T10 | T11 | associated_with | transmembrane protein 106 B,frontotemporal dementia |
| R7 | T12 | T13 | associated_with | transmembrane protein 106 B,frontotemporal dementia |
| R8 | T14 | T15 | associated_with | transmembrane protein 106 B,FTD |
| R9 | T16 | T17 | associated_with | transmembrane protein 106 B,FTD |
| R10 | T18 | T19 | associated_with | GRN,FTD |
| R11 | T20 | T21 | associated_with | TMEM106B,frontotemporal dementia |
| R12 | T22 | T23 | associated_with | TMEM106B,FTD |
| R13 | T24 | T25 | associated_with | GRN,FTD |
| R14 | T26 | T27 | associated_with | progranulin,frontotemporal dementia |
| R15 | T28 | T29 | associated_with | progranulin,frontotemporal dementia |
| R16 | T30 | T31 | associated_with | progranulin,FTD |
| R17 | T32 | T33 | associated_with | progranulin,FTD |
| R18 | T34 | T35 | associated_with | GRN,frontotemporal dementia |
| R19 | T36 | T37 | associated_with | GRN,frontotemporal dementia |
| R20 | T38 | T39 | associated_with | TMEM106B,FTD |
| R21 | T40 | T41 | associated_with | TMEM106B,MND |
| R22 | T42 | T43 | associated_with | TMEM106B,motor neuron disease |
| R23 | T44 | T45 | associated_with | C9ORF72,MND |
| R24 | T46 | T47 | associated_with | C9ORF72,motor neuron disease |
| R25 | T48 | T49 | associated_with | C9ORF72,motor neuron disease |
PubmedHPO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 162-185 | HP_0002145 | denotes | frontotemporal dementia |
| T2 | 177-185 | HP_0000726 | denotes | dementia |
Allie
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| SS1_24385136_1_0 | 90-117 | expanded | denotes | transmembrane protein 106 B |
| SS2_24385136_1_0 | 119-127 | abbr | denotes | TMEM106B |
| SS1_24385136_1_1 | 162-185 | expanded | denotes | frontotemporal dementia |
| SS2_24385136_1_1 | 187-190 | abbr | denotes | FTD |
| SS1_24385136_2_0 | 322-356 | expanded | denotes | chromosome 9 open reading frame 72 |
| SS2_24385136_2_0 | 358-365 | abbr | denotes | C9ORF72 |
| SS1_24385136_3_0 | 511-531 | expanded | denotes | motor neuron disease |
| SS2_24385136_3_0 | 533-536 | abbr | denotes | MND |
| SS1_24385136_5_0 | 965-975 | expanded | denotes | odds ratio |
| SS2_24385136_5_0 | 977-979 | abbr | denotes | OR |
| AE1_24385136_1_0 | SS1_24385136_1_0 | SS2_24385136_1_0 | abbreviatedTo | transmembrane protein 106 B,TMEM106B |
| AE1_24385136_1_1 | SS1_24385136_1_1 | SS2_24385136_1_1 | abbreviatedTo | frontotemporal dementia,FTD |
| AE1_24385136_2_0 | SS1_24385136_2_0 | SS2_24385136_2_0 | abbreviatedTo | chromosome 9 open reading frame 72,C9ORF72 |
| AE1_24385136_3_0 | SS1_24385136_3_0 | SS2_24385136_3_0 | abbreviatedTo | motor neuron disease,MND |
| AE1_24385136_5_0 | SS1_24385136_5_0 | SS2_24385136_5_0 | abbreviatedTo | odds ratio,OR |
DisGeNET5_variant_disease
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 24385136-3#224#233#geners3173615 | 603-612 | geners3173615 | denotes | rs3173615 |
| 24385136-3#238#247#geners1990622 | 617-626 | geners1990622 | denotes | rs1990622 |
| 24385136-3#132#152#diseaseC0085084 | 511-531 | diseaseC0085084 | denotes | motor neuron disease |
| 24385136-3#154#157#diseaseC0085084 | 533-536 | diseaseC0085084 | denotes | MND |
| 24385136-3#132#152#diseaseC0085084 | 511-531 | diseaseC0085084 | denotes | motor neuron disease |
| 24385136-3#154#157#diseaseC0085084 | 533-536 | diseaseC0085084 | denotes | MND |
| 224#233#geners3173615132#152#diseaseC0085084 | 24385136-3#224#233#geners3173615 | 24385136-3#132#152#diseaseC0085084 | associated_with | rs3173615,motor neuron disease |
| 224#233#geners3173615154#157#diseaseC0085084 | 24385136-3#224#233#geners3173615 | 24385136-3#154#157#diseaseC0085084 | associated_with | rs3173615,MND |
| 224#233#geners3173615132#152#diseaseC0085084 | 24385136-3#224#233#geners3173615 | 24385136-3#132#152#diseaseC0085084 | associated_with | rs3173615,motor neuron disease |
| 224#233#geners3173615154#157#diseaseC0085084 | 24385136-3#224#233#geners3173615 | 24385136-3#154#157#diseaseC0085084 | associated_with | rs3173615,MND |
| 238#247#geners1990622132#152#diseaseC0085084 | 24385136-3#238#247#geners1990622 | 24385136-3#132#152#diseaseC0085084 | associated_with | rs1990622,motor neuron disease |
| 238#247#geners1990622154#157#diseaseC0085084 | 24385136-3#238#247#geners1990622 | 24385136-3#154#157#diseaseC0085084 | associated_with | rs1990622,MND |
| 238#247#geners1990622132#152#diseaseC0085084 | 24385136-3#238#247#geners1990622 | 24385136-3#132#152#diseaseC0085084 | associated_with | rs1990622,motor neuron disease |
| 238#247#geners1990622154#157#diseaseC0085084 | 24385136-3#238#247#geners1990622 | 24385136-3#154#157#diseaseC0085084 | associated_with | rs1990622,MND |
DisGeNET5_gene_disease
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 24385136-0#18#25#gene203228 | 819-826 | gene203228 | denotes | C9ORF72 |
| 24385136-0#53#76#diseaseC0236642 | 1184-1706 | diseaseC0236642 | denotes | ficant difference was observed in MND patients (OR 0.85, p = 0.55). In cohort 2, the frequency of carriers homozygous for the minor allele was not significantly reduced in patients as compared to controls (OR 0.77, p = 0.079); however, a significant reduction was observed when focusing on those patients with frontotemporal lobar degeneration and TAR DNA-binding protein 43 inclusions (FTLD-TDP; OR 0.26, p < 0.001). Our study identifies TMEM106B as the first genetic factor modifying disease presentation in C9ORF72 expa |
| 24385136-0#53#76#diseaseC0338451 | 1184-1706 | diseaseC0338451 | denotes | ficant difference was observed in MND patients (OR 0.85, p = 0.55). In cohort 2, the frequency of carriers homozygous for the minor allele was not significantly reduced in patients as compared to controls (OR 0.77, p = 0.079); however, a significant reduction was observed when focusing on those patients with frontotemporal lobar degeneration and TAR DNA-binding protein 43 inclusions (FTLD-TDP; OR 0.26, p < 0.001). Our study identifies TMEM106B as the first genetic factor modifying disease presentation in C9ORF72 expa |
| 24385136-1#12#39#gene54664 | 90-117 | gene54664 | denotes | transmembrane protein 106 B |
| 24385136-1#41#49#gene54664 | 119-127 | gene54664 | denotes | TMEM106B |
| 24385136-1#129#140#gene2896 | 207-218 | gene2896 | denotes | progranulin |
| 24385136-1#142#145#gene2896 | 220-223 | gene2896 | denotes | GRN |
| 24385136-1#84#107#diseaseC0338451 | 162-185 | diseaseC0338451 | denotes | frontotemporal dementia |
| 24385136-1#109#112#diseaseC0338451 | 187-190 | diseaseC0338451 | denotes | FTD |
| 24385136-1#84#107#diseaseC0338451 | 162-185 | diseaseC0338451 | denotes | frontotemporal dementia |
| 24385136-1#109#112#diseaseC0338451 | 187-190 | diseaseC0338451 | denotes | FTD |
| 24385136-1#84#107#diseaseC0338451 | 162-185 | diseaseC0338451 | denotes | frontotemporal dementia |
| 24385136-1#109#112#diseaseC0338451 | 187-190 | diseaseC0338451 | denotes | FTD |
| 24385136-1#84#107#diseaseC0338451 | 162-185 | diseaseC0338451 | denotes | frontotemporal dementia |
| 24385136-1#109#112#diseaseC0338451 | 187-190 | diseaseC0338451 | denotes | FTD |
| 24385136-3#32#39#gene203228 | 411-418 | gene203228 | denotes | C9ORF72 |
| 24385136-3#96#103#gene203228 | 475-482 | gene203228 | denotes | C9ORF72 |
| 24385136-3#205#213#gene54664 | 584-592 | gene54664 | denotes | TMEM106B |
| 24385136-3#132#152#diseaseC0085084 | 511-531 | diseaseC0085084 | denotes | motor neuron disease |
| 24385136-3#154#157#diseaseC0085084 | 533-536 | diseaseC0085084 | denotes | MND |
| 24385136-3#132#152#diseaseC0085084 | 511-531 | diseaseC0085084 | denotes | motor neuron disease |
| 24385136-3#154#157#diseaseC0085084 | 533-536 | diseaseC0085084 | denotes | MND |
| 18#25#gene20322853#76#diseaseC0236642 | 24385136-0#18#25#gene203228 | 24385136-0#53#76#diseaseC0236642 | associated_with | C9ORF72,"ficant difference was observed in MND patients (OR 0.85, p = 0.55). In cohort 2, the frequency of carriers homozygous for the minor allele was not significantly reduced in patients as compared to controls (OR 0.77, p = 0.079); however, a significant reduction was observed when focusing on those patients with frontotemporal lobar degeneration and TAR DNA-binding protein 43 inclusions (FTLD-TDP; OR 0.26, p < 0.001). Our study identifies TMEM106B as the first genetic factor modifying disease presentation in C9ORF72 expa" |
| 18#25#gene20322853#76#diseaseC0338451 | 24385136-0#18#25#gene203228 | 24385136-0#53#76#diseaseC0338451 | associated_with | C9ORF72,"ficant difference was observed in MND patients (OR 0.85, p = 0.55). In cohort 2, the frequency of carriers homozygous for the minor allele was not significantly reduced in patients as compared to controls (OR 0.77, p = 0.079); however, a significant reduction was observed when focusing on those patients with frontotemporal lobar degeneration and TAR DNA-binding protein 43 inclusions (FTLD-TDP; OR 0.26, p < 0.001). Our study identifies TMEM106B as the first genetic factor modifying disease presentation in C9ORF72 expa" |
| 12#39#gene5466484#107#diseaseC0338451 | 24385136-1#12#39#gene54664 | 24385136-1#84#107#diseaseC0338451 | associated_with | transmembrane protein 106 B,frontotemporal dementia |
| 12#39#gene54664109#112#diseaseC0338451 | 24385136-1#12#39#gene54664 | 24385136-1#109#112#diseaseC0338451 | associated_with | transmembrane protein 106 B,FTD |
| 12#39#gene5466484#107#diseaseC0338451 | 24385136-1#12#39#gene54664 | 24385136-1#84#107#diseaseC0338451 | associated_with | transmembrane protein 106 B,frontotemporal dementia |
| 12#39#gene54664109#112#diseaseC0338451 | 24385136-1#12#39#gene54664 | 24385136-1#109#112#diseaseC0338451 | associated_with | transmembrane protein 106 B,FTD |
| 12#39#gene5466484#107#diseaseC0338451 | 24385136-1#12#39#gene54664 | 24385136-1#84#107#diseaseC0338451 | associated_with | transmembrane protein 106 B,frontotemporal dementia |
| 12#39#gene54664109#112#diseaseC0338451 | 24385136-1#12#39#gene54664 | 24385136-1#109#112#diseaseC0338451 | associated_with | transmembrane protein 106 B,FTD |
| 12#39#gene5466484#107#diseaseC0338451 | 24385136-1#12#39#gene54664 | 24385136-1#84#107#diseaseC0338451 | associated_with | transmembrane protein 106 B,frontotemporal dementia |
| 12#39#gene54664109#112#diseaseC0338451 | 24385136-1#12#39#gene54664 | 24385136-1#109#112#diseaseC0338451 | associated_with | transmembrane protein 106 B,FTD |
| 41#49#gene5466484#107#diseaseC0338451 | 24385136-1#41#49#gene54664 | 24385136-1#84#107#diseaseC0338451 | associated_with | TMEM106B,frontotemporal dementia |
| 41#49#gene54664109#112#diseaseC0338451 | 24385136-1#41#49#gene54664 | 24385136-1#109#112#diseaseC0338451 | associated_with | TMEM106B,FTD |
| 41#49#gene5466484#107#diseaseC0338451 | 24385136-1#41#49#gene54664 | 24385136-1#84#107#diseaseC0338451 | associated_with | TMEM106B,frontotemporal dementia |
| 41#49#gene54664109#112#diseaseC0338451 | 24385136-1#41#49#gene54664 | 24385136-1#109#112#diseaseC0338451 | associated_with | TMEM106B,FTD |
| 41#49#gene5466484#107#diseaseC0338451 | 24385136-1#41#49#gene54664 | 24385136-1#84#107#diseaseC0338451 | associated_with | TMEM106B,frontotemporal dementia |
| 41#49#gene54664109#112#diseaseC0338451 | 24385136-1#41#49#gene54664 | 24385136-1#109#112#diseaseC0338451 | associated_with | TMEM106B,FTD |
| 41#49#gene5466484#107#diseaseC0338451 | 24385136-1#41#49#gene54664 | 24385136-1#84#107#diseaseC0338451 | associated_with | TMEM106B,frontotemporal dementia |
| 41#49#gene54664109#112#diseaseC0338451 | 24385136-1#41#49#gene54664 | 24385136-1#109#112#diseaseC0338451 | associated_with | TMEM106B,FTD |
| 129#140#gene289684#107#diseaseC0338451 | 24385136-1#129#140#gene2896 | 24385136-1#84#107#diseaseC0338451 | associated_with | progranulin,frontotemporal dementia |
| 129#140#gene2896109#112#diseaseC0338451 | 24385136-1#129#140#gene2896 | 24385136-1#109#112#diseaseC0338451 | associated_with | progranulin,FTD |
| 129#140#gene289684#107#diseaseC0338451 | 24385136-1#129#140#gene2896 | 24385136-1#84#107#diseaseC0338451 | associated_with | progranulin,frontotemporal dementia |
| 129#140#gene2896109#112#diseaseC0338451 | 24385136-1#129#140#gene2896 | 24385136-1#109#112#diseaseC0338451 | associated_with | progranulin,FTD |
| 129#140#gene289684#107#diseaseC0338451 | 24385136-1#129#140#gene2896 | 24385136-1#84#107#diseaseC0338451 | associated_with | progranulin,frontotemporal dementia |
| 129#140#gene2896109#112#diseaseC0338451 | 24385136-1#129#140#gene2896 | 24385136-1#109#112#diseaseC0338451 | associated_with | progranulin,FTD |
| 129#140#gene289684#107#diseaseC0338451 | 24385136-1#129#140#gene2896 | 24385136-1#84#107#diseaseC0338451 | associated_with | progranulin,frontotemporal dementia |
| 129#140#gene2896109#112#diseaseC0338451 | 24385136-1#129#140#gene2896 | 24385136-1#109#112#diseaseC0338451 | associated_with | progranulin,FTD |
| 142#145#gene289684#107#diseaseC0338451 | 24385136-1#142#145#gene2896 | 24385136-1#84#107#diseaseC0338451 | associated_with | GRN,frontotemporal dementia |
| 142#145#gene2896109#112#diseaseC0338451 | 24385136-1#142#145#gene2896 | 24385136-1#109#112#diseaseC0338451 | associated_with | GRN,FTD |
| 142#145#gene289684#107#diseaseC0338451 | 24385136-1#142#145#gene2896 | 24385136-1#84#107#diseaseC0338451 | associated_with | GRN,frontotemporal dementia |
| 142#145#gene2896109#112#diseaseC0338451 | 24385136-1#142#145#gene2896 | 24385136-1#109#112#diseaseC0338451 | associated_with | GRN,FTD |
| 142#145#gene289684#107#diseaseC0338451 | 24385136-1#142#145#gene2896 | 24385136-1#84#107#diseaseC0338451 | associated_with | GRN,frontotemporal dementia |
| 142#145#gene2896109#112#diseaseC0338451 | 24385136-1#142#145#gene2896 | 24385136-1#109#112#diseaseC0338451 | associated_with | GRN,FTD |
| 142#145#gene289684#107#diseaseC0338451 | 24385136-1#142#145#gene2896 | 24385136-1#84#107#diseaseC0338451 | associated_with | GRN,frontotemporal dementia |
| 142#145#gene2896109#112#diseaseC0338451 | 24385136-1#142#145#gene2896 | 24385136-1#109#112#diseaseC0338451 | associated_with | GRN,FTD |
| 32#39#gene203228132#152#diseaseC0085084 | 24385136-3#32#39#gene203228 | 24385136-3#132#152#diseaseC0085084 | associated_with | C9ORF72,motor neuron disease |
| 32#39#gene203228154#157#diseaseC0085084 | 24385136-3#32#39#gene203228 | 24385136-3#154#157#diseaseC0085084 | associated_with | C9ORF72,MND |
| 32#39#gene203228132#152#diseaseC0085084 | 24385136-3#32#39#gene203228 | 24385136-3#132#152#diseaseC0085084 | associated_with | C9ORF72,motor neuron disease |
| 32#39#gene203228154#157#diseaseC0085084 | 24385136-3#32#39#gene203228 | 24385136-3#154#157#diseaseC0085084 | associated_with | C9ORF72,MND |
| 96#103#gene203228132#152#diseaseC0085084 | 24385136-3#96#103#gene203228 | 24385136-3#132#152#diseaseC0085084 | associated_with | C9ORF72,motor neuron disease |
| 96#103#gene203228154#157#diseaseC0085084 | 24385136-3#96#103#gene203228 | 24385136-3#154#157#diseaseC0085084 | associated_with | C9ORF72,MND |
| 96#103#gene203228132#152#diseaseC0085084 | 24385136-3#96#103#gene203228 | 24385136-3#132#152#diseaseC0085084 | associated_with | C9ORF72,motor neuron disease |
| 96#103#gene203228154#157#diseaseC0085084 | 24385136-3#96#103#gene203228 | 24385136-3#154#157#diseaseC0085084 | associated_with | C9ORF72,MND |
| 205#213#gene54664132#152#diseaseC0085084 | 24385136-3#205#213#gene54664 | 24385136-3#132#152#diseaseC0085084 | associated_with | TMEM106B,motor neuron disease |
| 205#213#gene54664154#157#diseaseC0085084 | 24385136-3#205#213#gene54664 | 24385136-3#154#157#diseaseC0085084 | associated_with | TMEM106B,MND |
| 205#213#gene54664132#152#diseaseC0085084 | 24385136-3#205#213#gene54664 | 24385136-3#132#152#diseaseC0085084 | associated_with | TMEM106B,motor neuron disease |
| 205#213#gene54664154#157#diseaseC0085084 | 24385136-3#205#213#gene54664 | 24385136-3#154#157#diseaseC0085084 | associated_with | TMEM106B,MND |
DisGeNet-2017-sample
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T951 | 819-826 | gene:203228 | denotes | C9ORF72 |
| T952 | 1184-1706 | disease:C0236642 | denotes | ficant difference was observed in MND patients (OR 0.85, p = 0.55). In cohort 2, the frequency of carriers homozygous for the minor allele was not significantly reduced in patients as compared to controls (OR 0.77, p = 0.079); however, a significant reduction was observed when focusing on those patients with frontotemporal lobar degeneration and TAR DNA-binding protein 43 inclusions (FTLD-TDP; OR 0.26, p < 0.001). Our study identifies TMEM106B as the first genetic factor modifying disease presentation in C9ORF72 expa |
| R1 | T951 | T952 | associated_with | C9ORF72,"ficant difference was observed in MND patients (OR 0.85, p = 0.55). In cohort 2, the frequency of carriers homozygous for the minor allele was not significantly reduced in patients as compared to controls (OR 0.77, p = 0.079); however, a significant reduction was observed when focusing on those patients with frontotemporal lobar degeneration and TAR DNA-binding protein 43 inclusions (FTLD-TDP; OR 0.26, p < 0.001). Our study identifies TMEM106B as the first genetic factor modifying disease presentation in C9ORF72 expa" |
| R2 | T951 | T952 | associated_with | C9ORF72,"ficant difference was observed in MND patients (OR 0.85, p = 0.55). In cohort 2, the frequency of carriers homozygous for the minor allele was not significantly reduced in patients as compared to controls (OR 0.77, p = 0.079); however, a significant reduction was observed when focusing on those patients with frontotemporal lobar degeneration and TAR DNA-binding protein 43 inclusions (FTLD-TDP; OR 0.26, p < 0.001). Our study identifies TMEM106B as the first genetic factor modifying disease presentation in C9ORF72 expa" |
performance-test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| PD-UBERON-AE-B_T1 | 517-523 | http://purl.obolibrary.org/obo/UBERON_2000602 | denotes | neuron |