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sentences

Id Subject Object Predicate Lexical cue
TextSentencer_T1 0-42 Sentence denotes Malaria surveillance--United States, 2011.
TextSentencer_T2 43-61 Sentence denotes PROBLEM/CONDITION:
TextSentencer_T3 62-144 Sentence denotes Malaria in humans is caused by intraerythrocytic protozoa of the genus Plasmodium.
TextSentencer_T4 145-231 Sentence denotes These parasites are transmitted by the bite of an infective female Anopheles mosquito.
TextSentencer_T5 232-371 Sentence denotes The majority of malaria infections in the United States occur among persons who have traveled to regions with ongoing malaria transmission.
TextSentencer_T6 372-599 Sentence denotes However, malaria is also occasionally acquired by persons who have not traveled out of the country, through exposure to infected blood products, congenital transmission, laboratory exposure, or local mosquitoborne transmission.
TextSentencer_T7 600-752 Sentence denotes Malaria surveillance in the United States is conducted to identify episodes of local transmission and to guide prevention recommendations for travelers.
TextSentencer_T8 753-768 Sentence denotes PERIOD COVERED:
TextSentencer_T9 769-883 Sentence denotes This report summarizes cases in persons with onset of illness in 2011 and summarizes trends during previous years.
TextSentencer_T10 884-906 Sentence denotes DESCRIPTION OF SYSTEM:
TextSentencer_T11 907-1110 Sentence denotes Malaria cases diagnosed by blood film, polymerase chain reaction, or rapid diagnostic tests are mandated to be reported to local and state health departments by health-care providers or laboratory staff.
TextSentencer_T12 1111-1342 Sentence denotes Case investigations are conducted by local and state health departments, and reports are transmitted to CDC through the National Malaria Surveillance System, National Notifiable Diseases Surveillance System, or direct CDC consults.
TextSentencer_T13 1343-1412 Sentence denotes Data from these reporting systems serve as the basis for this report.
TextSentencer_T14 1413-1686 Sentence denotes RESULTS: CDC received 1,925 reported cases of malaria with an onset of symptoms in 2011 among persons in the United States, including 1,920 cases classified as imported, one laboratory-acquired case, one transfusion-related case, two congenital cases, and one cryptic case.
TextSentencer_T15 1687-1834 Sentence denotes The total number of cases represents an increase of 14% from the 1,691 cases reported for 2010 and the largest number of reported cases since 1971.
TextSentencer_T16 1835-1957 Sentence denotes Plasmodium falciparum, P. vivax, P. malariae, and P. ovale were identified in 49%, 22%, 3%, and 3% of cases, respectively.
TextSentencer_T17 1958-2012 Sentence denotes Twenty-one (1%) patients were infected by two species.
TextSentencer_T18 2013-2128 Sentence denotes The infecting species was unreported or undetermined in 23% of cases, an increase of 5 percentage points from 2010.
TextSentencer_T19 2129-2232 Sentence denotes Of the 871 patients who reported purpose of travel, 607 (70%) were visiting friends or relatives (VFR).
TextSentencer_T20 2233-2504 Sentence denotes Among the 929 cases in U.S. civilians for whom information on chemoprophylaxis use and travel region was known, 57 (6%) patients reported that they had followed and adhered to a chemoprophylactic drug regimen recommended by CDC for the regions to which they had traveled.
TextSentencer_T21 2505-2605 Sentence denotes Thirty-seven cases were reported in pregnant women, among whom only one adhered to chemoprophylaxis.
TextSentencer_T22 2606-2771 Sentence denotes Among all reported cases, significantly more cases (n=275 [14%]) were classified as severe infections in 2011 compared with 2010 (n=183 [11%]; p=0.0018; chi square).
TextSentencer_T23 2772-2811 Sentence denotes Five persons with malaria died in 2011.
TextSentencer_T24 2812-3058 Sentence denotes After 2 years of improvement in completion of data elements on the malaria case form, higher percentages of incomplete data in 2011 for residential status (from 11% in 2010 to 19% in 2011) and species (from 18% in 2010 to 22% in 2011) were noted.
TextSentencer_T25 3059-3074 Sentence denotes INTERPRETATION:
TextSentencer_T26 3075-3170 Sentence denotes The number of cases reported in 2011 marked the largest number of cases since 1971 (N = 3,180).
TextSentencer_T27 3171-3355 Sentence denotes Despite progress in reducing the global burden of malaria, the disease remains endemic in many regions, and the use of appropriate prevention measures by travelers is still inadequate.
TextSentencer_T28 3356-3378 Sentence denotes PUBLIC HEALTH ACTIONS:
TextSentencer_T29 3379-3476 Sentence denotes Completion of data elements on the malaria case report form decreased in 2011 compared with 2010.
TextSentencer_T30 3477-3581 Sentence denotes This incomplete reporting compromises efforts to examine trends in malaria cases and prevent infections.
TextSentencer_T31 3582-3688 Sentence denotes VFR travelers continue to be a difficult population to reach with effective malaria prevention strategies.
TextSentencer_T32 3689-3892 Sentence denotes Evidence-based prevention strategies that effectively target VFR travelers need to be developed and implemented to have a substantial impact on the numbers of imported malaria cases in the United States.
TextSentencer_T33 3893-4081 Sentence denotes Although more persons with cases reported taking chemoprophylaxis to prevent malaria, the majority reported not taking it, and adherence was poor among those who did take chemoprophylaxis.
TextSentencer_T34 4082-4255 Sentence denotes Proper use of malaria chemoprophylaxis will prevent the majority of malaria illness and reduce the risk for severe disease (http://www.cdc.gov/malaria/travelers/drugs.html).
TextSentencer_T35 4256-4504 Sentence denotes Malaria infections can be fatal if not diagnosed and treated promptly with antimalarial medications appropriate for the patient's age and medical history, the likely country of malaria acquisition, and previous use of antimalarial chemoprophylaxis.
TextSentencer_T36 4505-4653 Sentence denotes Clinicians should consult the CDC Guidelines for Treatment of Malaria and contact the CDC's Malaria Hotline for case management advice, when needed.
TextSentencer_T37 4654-4838 Sentence denotes Malaria treatment recommendations can be obtained online (http://www.cdc.gov/malaria/diagnosis_treatment) or by calling the Malaria Hotline (770-488-7788 or toll-free at 855-856-4713).
T1 0-42 Sentence denotes Malaria surveillance--United States, 2011.
T2 43-61 Sentence denotes PROBLEM/CONDITION:
T3 62-144 Sentence denotes Malaria in humans is caused by intraerythrocytic protozoa of the genus Plasmodium.
T4 145-231 Sentence denotes These parasites are transmitted by the bite of an infective female Anopheles mosquito.
T5 232-371 Sentence denotes The majority of malaria infections in the United States occur among persons who have traveled to regions with ongoing malaria transmission.
T6 372-599 Sentence denotes However, malaria is also occasionally acquired by persons who have not traveled out of the country, through exposure to infected blood products, congenital transmission, laboratory exposure, or local mosquitoborne transmission.
T7 600-752 Sentence denotes Malaria surveillance in the United States is conducted to identify episodes of local transmission and to guide prevention recommendations for travelers.
T8 753-768 Sentence denotes PERIOD COVERED:
T9 769-883 Sentence denotes This report summarizes cases in persons with onset of illness in 2011 and summarizes trends during previous years.
T10 884-906 Sentence denotes DESCRIPTION OF SYSTEM:
T11 907-1110 Sentence denotes Malaria cases diagnosed by blood film, polymerase chain reaction, or rapid diagnostic tests are mandated to be reported to local and state health departments by health-care providers or laboratory staff.
T12 1111-1342 Sentence denotes Case investigations are conducted by local and state health departments, and reports are transmitted to CDC through the National Malaria Surveillance System, National Notifiable Diseases Surveillance System, or direct CDC consults.
T13 1343-1412 Sentence denotes Data from these reporting systems serve as the basis for this report.
T14 1413-1686 Sentence denotes RESULTS: CDC received 1,925 reported cases of malaria with an onset of symptoms in 2011 among persons in the United States, including 1,920 cases classified as imported, one laboratory-acquired case, one transfusion-related case, two congenital cases, and one cryptic case.
T15 1687-1834 Sentence denotes The total number of cases represents an increase of 14% from the 1,691 cases reported for 2010 and the largest number of reported cases since 1971.
T16 1835-1957 Sentence denotes Plasmodium falciparum, P. vivax, P. malariae, and P. ovale were identified in 49%, 22%, 3%, and 3% of cases, respectively.
T17 1958-2012 Sentence denotes Twenty-one (1%) patients were infected by two species.
T18 2013-2128 Sentence denotes The infecting species was unreported or undetermined in 23% of cases, an increase of 5 percentage points from 2010.
T19 2129-2232 Sentence denotes Of the 871 patients who reported purpose of travel, 607 (70%) were visiting friends or relatives (VFR).
T20 2233-2504 Sentence denotes Among the 929 cases in U.S. civilians for whom information on chemoprophylaxis use and travel region was known, 57 (6%) patients reported that they had followed and adhered to a chemoprophylactic drug regimen recommended by CDC for the regions to which they had traveled.
T21 2505-2605 Sentence denotes Thirty-seven cases were reported in pregnant women, among whom only one adhered to chemoprophylaxis.
T22 2606-2771 Sentence denotes Among all reported cases, significantly more cases (n=275 [14%]) were classified as severe infections in 2011 compared with 2010 (n=183 [11%]; p=0.0018; chi square).
T23 2772-2811 Sentence denotes Five persons with malaria died in 2011.
T24 2812-3058 Sentence denotes After 2 years of improvement in completion of data elements on the malaria case form, higher percentages of incomplete data in 2011 for residential status (from 11% in 2010 to 19% in 2011) and species (from 18% in 2010 to 22% in 2011) were noted.
T25 3059-3074 Sentence denotes INTERPRETATION:
T26 3075-3170 Sentence denotes The number of cases reported in 2011 marked the largest number of cases since 1971 (N = 3,180).
T27 3171-3355 Sentence denotes Despite progress in reducing the global burden of malaria, the disease remains endemic in many regions, and the use of appropriate prevention measures by travelers is still inadequate.
T28 3356-3378 Sentence denotes PUBLIC HEALTH ACTIONS:
T29 3379-3476 Sentence denotes Completion of data elements on the malaria case report form decreased in 2011 compared with 2010.
T30 3477-3581 Sentence denotes This incomplete reporting compromises efforts to examine trends in malaria cases and prevent infections.
T31 3582-3688 Sentence denotes VFR travelers continue to be a difficult population to reach with effective malaria prevention strategies.
T32 3689-3892 Sentence denotes Evidence-based prevention strategies that effectively target VFR travelers need to be developed and implemented to have a substantial impact on the numbers of imported malaria cases in the United States.
T33 3893-4081 Sentence denotes Although more persons with cases reported taking chemoprophylaxis to prevent malaria, the majority reported not taking it, and adherence was poor among those who did take chemoprophylaxis.
T34 4082-4255 Sentence denotes Proper use of malaria chemoprophylaxis will prevent the majority of malaria illness and reduce the risk for severe disease (http://www.cdc.gov/malaria/travelers/drugs.html).
T35 4256-4504 Sentence denotes Malaria infections can be fatal if not diagnosed and treated promptly with antimalarial medications appropriate for the patient's age and medical history, the likely country of malaria acquisition, and previous use of antimalarial chemoprophylaxis.
T36 4505-4653 Sentence denotes Clinicians should consult the CDC Guidelines for Treatment of Malaria and contact the CDC's Malaria Hotline for case management advice, when needed.
T37 4654-4838 Sentence denotes Malaria treatment recommendations can be obtained online (http://www.cdc.gov/malaria/diagnosis_treatment) or by calling the Malaria Hotline (770-488-7788 or toll-free at 855-856-4713).

Allie

Id Subject Object Predicate Lexical cue
SS1_24172939_19_0 2196-2225 expanded denotes visiting friends or relatives
SS2_24172939_19_0 2227-2230 abbr denotes VFR
AE1_24172939_19_0 SS1_24172939_19_0 SS2_24172939_19_0 abbreviatedTo visiting friends or relatives,VFR

PubCasesORDO

Id Subject Object Predicate Lexical cue
AB1 49-69 ORDO:673 denotes M/CONDITION: Malaria
AB2 248-255 ORDO:673 denotes malaria
AB3 350-357 ORDO:673 denotes malaria
AB4 381-388 ORDO:673 denotes malaria
AB5 600-607 ORDO:673 denotes Malaria
AB6 904-914 ORDO:673 denotes M: Malaria
AB7 1240-1247 ORDO:673 denotes Malaria
AB8 1459-1466 ORDO:673 denotes malaria
AB9 1871-1879 ORDO:673 denotes malariae
AB10 2790-2797 ORDO:673 denotes malaria
AB11 2879-2886 ORDO:673 denotes malaria
AB12 3221-3228 ORDO:673 denotes malaria
AB13 3414-3421 ORDO:673 denotes malaria
AB14 3544-3551 ORDO:673 denotes malaria
AB15 3658-3665 ORDO:673 denotes malaria
AB16 3857-3864 ORDO:673 denotes malaria
AB17 3970-3977 ORDO:673 denotes malaria
AB18 4096-4103 ORDO:673 denotes malaria
AB19 4150-4157 ORDO:673 denotes malaria
AB20 4225-4232 ORDO:673 denotes malaria
AB21 4256-4263 ORDO:673 denotes Malaria
AB22 4433-4440 ORDO:673 denotes malaria
AB23 4567-4574 ORDO:673 denotes Malaria
AB24 4597-4604 ORDO:673 denotes Malaria
AB25 4654-4661 ORDO:673 denotes Malaria
AB26 4731-4738 ORDO:673 denotes malaria
AB27 4778-4785 ORDO:673 denotes Malaria

UBERON-AE

Id Subject Object Predicate Lexical cue
PD-UBERON-AE-B_T1 501-506 http://purl.obolibrary.org/obo/UBERON_0000178 denotes blood
PD-UBERON-AE-B_T2 934-939 http://purl.obolibrary.org/obo/UBERON_0000178 denotes blood

performance-test

Id Subject Object Predicate Lexical cue
PD-UBERON-AE-B_T1 501-506 http://purl.obolibrary.org/obo/UBERON_0000178 denotes blood
PD-UBERON-AE-B_T2 934-939 http://purl.obolibrary.org/obo/UBERON_0000178 denotes blood