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PubMed:24043392 JSONTXT

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Glycan-Motif

Id Subject Object Predicate Lexical cue
T1 81-92 https://glytoucan.org/Structures/Glycans/G81533KY denotes sialic acid
T2 111-123 https://glytoucan.org/Structures/Glycans/G81533KY denotes Sialic acids
T3 553-564 https://glytoucan.org/Structures/Glycans/G81533KY denotes sialic acid
T4 773-784 https://glytoucan.org/Structures/Glycans/G81533KY denotes sialic acid
T5 1193-1204 https://glytoucan.org/Structures/Glycans/G81533KY denotes sialic acid
T6 1320-1331 https://glytoucan.org/Structures/Glycans/G81533KY denotes sialic acid
T7 1662-1673 https://glytoucan.org/Structures/Glycans/G81533KY denotes sialic acid

GlyCosmos6-Glycan-Motif-Image

Id Subject Object Predicate Lexical cue image
T1 81-92 Glycan_Motif denotes sialic acid https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G81533KY
T2 111-123 Glycan_Motif denotes Sialic acids https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G81533KY
T3 553-564 Glycan_Motif denotes sialic acid https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G81533KY
T4 773-784 Glycan_Motif denotes sialic acid https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G81533KY
T5 1193-1204 Glycan_Motif denotes sialic acid https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G81533KY
T6 1320-1331 Glycan_Motif denotes sialic acid https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G81533KY
T7 1662-1673 Glycan_Motif denotes sialic acid https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G81533KY

GlyCosmos6-Glycan-Motif-Structure

Id Subject Object Predicate Lexical cue
T1 81-92 https://glytoucan.org/Structures/Glycans/G81533KY denotes sialic acid
T2 111-123 https://glytoucan.org/Structures/Glycans/G81533KY denotes Sialic acids
T3 553-564 https://glytoucan.org/Structures/Glycans/G81533KY denotes sialic acid
T4 773-784 https://glytoucan.org/Structures/Glycans/G81533KY denotes sialic acid
T5 1193-1204 https://glytoucan.org/Structures/Glycans/G81533KY denotes sialic acid
T6 1320-1331 https://glytoucan.org/Structures/Glycans/G81533KY denotes sialic acid
T7 1662-1673 https://glytoucan.org/Structures/Glycans/G81533KY denotes sialic acid

sentences

Id Subject Object Predicate Lexical cue
TextSentencer_T1 0-110 Sentence denotes Common recognition principles across diverse sequence and structural families of sialic acid binding proteins.
TextSentencer_T2 111-219 Sentence denotes Sialic acids form a large family of 9-carbon monosaccharides and are integral components of glycoconjugates.
TextSentencer_T3 220-386 Sentence denotes They are known to bind to a wide range of receptors belonging to diverse sequence families and fold classes and are key mediators in a plethora of cellular processes.
TextSentencer_T4 387-492 Sentence denotes Thus, it is of great interest to understand the features that give rise to such a recognition capability.
TextSentencer_T5 493-808 Sentence denotes Structural analyses using a non-redundant data set of known sialic acid binding proteins was carried out, which included exhaustive binding site comparisons and site alignments using in-house algorithms, followed by clustering and tree computation, which has led to derivation of sialic acid recognition principles.
TextSentencer_T6 809-955 Sentence denotes Although the proteins in the data set belong to several sequence and structure families, their binding sites could be grouped into only six types.
TextSentencer_T7 956-1117 Sentence denotes Structural comparison of the binding sites indicates that all sites contain one or more different combinations of key structural features over a common scaffold.
TextSentencer_T8 1118-1205 Sentence denotes The six binding site types thus serve as structural motifs for recognizing sialic acid.
TextSentencer_T9 1206-1344 Sentence denotes Scanning the motifs against a non-redundant set of binding sites from PDB indicated the motifs to be specific for sialic acid recognition.
TextSentencer_T10 1345-1454 Sentence denotes Knowledge of determinants obtained from this study will be useful for detecting function in unknown proteins.
TextSentencer_T11 1455-1700 Sentence denotes As an example analysis, a genome-wide scan for the motifs in structures of Mycobacterium tuberculosis proteome identified 17 hits that contain combinations of the features, suggesting a possible function of sialic acid binding by these proteins.
T1 0-110 Sentence denotes Common recognition principles across diverse sequence and structural families of sialic acid binding proteins.
T2 111-219 Sentence denotes Sialic acids form a large family of 9-carbon monosaccharides and are integral components of glycoconjugates.
T3 220-386 Sentence denotes They are known to bind to a wide range of receptors belonging to diverse sequence families and fold classes and are key mediators in a plethora of cellular processes.
T4 387-492 Sentence denotes Thus, it is of great interest to understand the features that give rise to such a recognition capability.
T5 493-808 Sentence denotes Structural analyses using a non-redundant data set of known sialic acid binding proteins was carried out, which included exhaustive binding site comparisons and site alignments using in-house algorithms, followed by clustering and tree computation, which has led to derivation of sialic acid recognition principles.
T6 809-955 Sentence denotes Although the proteins in the data set belong to several sequence and structure families, their binding sites could be grouped into only six types.
T7 956-1117 Sentence denotes Structural comparison of the binding sites indicates that all sites contain one or more different combinations of key structural features over a common scaffold.
T8 1118-1205 Sentence denotes The six binding site types thus serve as structural motifs for recognizing sialic acid.
T9 1206-1344 Sentence denotes Scanning the motifs against a non-redundant set of binding sites from PDB indicated the motifs to be specific for sialic acid recognition.
T10 1345-1454 Sentence denotes Knowledge of determinants obtained from this study will be useful for detecting function in unknown proteins.
T11 1455-1700 Sentence denotes As an example analysis, a genome-wide scan for the motifs in structures of Mycobacterium tuberculosis proteome identified 17 hits that contain combinations of the features, suggesting a possible function of sialic acid binding by these proteins.
T1 0-110 Sentence denotes Common recognition principles across diverse sequence and structural families of sialic acid binding proteins.
T2 111-219 Sentence denotes Sialic acids form a large family of 9-carbon monosaccharides and are integral components of glycoconjugates.
T3 220-386 Sentence denotes They are known to bind to a wide range of receptors belonging to diverse sequence families and fold classes and are key mediators in a plethora of cellular processes.
T4 387-492 Sentence denotes Thus, it is of great interest to understand the features that give rise to such a recognition capability.
T5 493-808 Sentence denotes Structural analyses using a non-redundant data set of known sialic acid binding proteins was carried out, which included exhaustive binding site comparisons and site alignments using in-house algorithms, followed by clustering and tree computation, which has led to derivation of sialic acid recognition principles.
T6 809-955 Sentence denotes Although the proteins in the data set belong to several sequence and structure families, their binding sites could be grouped into only six types.
T7 956-1117 Sentence denotes Structural comparison of the binding sites indicates that all sites contain one or more different combinations of key structural features over a common scaffold.
T8 1118-1205 Sentence denotes The six binding site types thus serve as structural motifs for recognizing sialic acid.
T9 1206-1344 Sentence denotes Scanning the motifs against a non-redundant set of binding sites from PDB indicated the motifs to be specific for sialic acid recognition.
T10 1345-1454 Sentence denotes Knowledge of determinants obtained from this study will be useful for detecting function in unknown proteins.
T11 1455-1700 Sentence denotes As an example analysis, a genome-wide scan for the motifs in structures of Mycobacterium tuberculosis proteome identified 17 hits that contain combinations of the features, suggesting a possible function of sialic acid binding by these proteins.

PubmedHPO

Id Subject Object Predicate Lexical cue
T1 355-363 HP_0001050 denotes plethora

ICD10

Id Subject Object Predicate Lexical cue
T1 1544-1556 http://purl.bioontology.org/ontology/ICD10/A15-A19.9 denotes tuberculosis

GlycoBiology-FMA

Id Subject Object Predicate Lexical cue
_T1 88-109 FMAID:67119 denotes acid binding proteins
_T2 88-109 FMAID:165430 denotes acid binding proteins
_T3 101-109 FMAID:165447 denotes proteins
_T4 101-109 FMAID:67257 denotes proteins
_T5 156-171 FMAID:196730 denotes monosaccharides
_T6 156-171 FMAID:82741 denotes monosaccharides
_T7 203-218 FMAID:196776 denotes glycoconjugates
_T8 203-218 FMAID:82782 denotes glycoconjugates
_T9 560-581 FMAID:165430 denotes acid binding proteins
_T10 560-581 FMAID:67119 denotes acid binding proteins
_T11 573-581 FMAID:165447 denotes proteins
_T12 573-581 FMAID:67257 denotes proteins
_T13 724-728 FMAID:146321 denotes tree
_T14 724-728 FMAID:50613 denotes tree
_T15 822-830 FMAID:67257 denotes proteins
_T16 822-830 FMAID:165447 denotes proteins
_T17 1156-1169 FMAID:258694 denotes as structural
_T18 1445-1453 FMAID:67257 denotes proteins
_T19 1445-1453 FMAID:165447 denotes proteins
_T20 1481-1487 FMAID:84116 denotes genome
_T21 1481-1487 FMAID:198062 denotes genome
_T22 1691-1699 FMAID:67257 denotes proteins
_T23 1691-1699 FMAID:165447 denotes proteins

uniprot-human

Id Subject Object Predicate Lexical cue
T1 1669-1699 http://www.uniprot.org/uniprot/P00505 denotes acid binding by these proteins

uniprot-mouse

Id Subject Object Predicate Lexical cue
T1 402-407 http://www.uniprot.org/uniprot/Q91ZZ5 denotes great

GlycoBiology-NCBITAXON

Id Subject Object Predicate Lexical cue
T1 262-271 http://purl.bioontology.org/ontology/STY/T192 denotes receptors
T2 521-524 http://purl.bioontology.org/ontology/NCBITAXON/604139 denotes non
T3 927-934 http://purl.bioontology.org/ontology/STY/T096 denotes grouped
T4 1236-1239 http://purl.bioontology.org/ontology/NCBITAXON/604139 denotes non
T5 1530-1543 http://purl.bioontology.org/ontology/NCBITAXON/1288388 denotes Mycobacterium
T6 1530-1543 http://purl.bioontology.org/ontology/NCBITAXON/1790 denotes Mycobacterium
T7 1530-1543 http://purl.bioontology.org/ontology/NCBITAXON/1791 denotes Mycobacterium
T8 1530-1543 http://purl.bioontology.org/ontology/NCBITAXON/56425 denotes Mycobacterium
T9 1530-1543 http://purl.bioontology.org/ontology/NCBITAXON/28045 denotes Mycobacterium
T10 1530-1543 http://purl.bioontology.org/ontology/NCBITAXON/1766 denotes Mycobacterium
T11 1530-1543 http://purl.bioontology.org/ontology/NCBITAXON/1794 denotes Mycobacterium
T12 1530-1543 http://purl.bioontology.org/ontology/NCBITAXON/230710 denotes Mycobacterium
T13 1530-1543 http://purl.bioontology.org/ontology/NCBITAXON/912594 denotes Mycobacterium
T14 1530-1543 http://purl.bioontology.org/ontology/NCBITAXON/470074 denotes Mycobacterium
T15 1530-1543 http://purl.bioontology.org/ontology/NCBITAXON/1795 denotes Mycobacterium
T16 1530-1543 http://purl.bioontology.org/ontology/NCBITAXON/319706 denotes Mycobacterium
T17 1530-1543 http://purl.bioontology.org/ontology/NCBITAXON/368455 denotes Mycobacterium
T18 1530-1543 http://purl.bioontology.org/ontology/NCBITAXON/39693 denotes Mycobacterium
T19 1530-1543 http://purl.bioontology.org/ontology/NCBITAXON/318424 denotes Mycobacterium
T20 1530-1543 http://purl.bioontology.org/ontology/NCBITAXON/370526 denotes Mycobacterium
T21 1530-1543 http://purl.bioontology.org/ontology/NCBITAXON/98668 denotes Mycobacterium
T22 1530-1543 http://purl.bioontology.org/ontology/NCBITAXON/33894 denotes Mycobacterium
T23 1530-1543 http://purl.bioontology.org/ontology/NCBITAXON/46351 denotes Mycobacterium
T24 1530-1543 http://purl.bioontology.org/ontology/NCBITAXON/1781 denotes Mycobacterium
T25 1530-1556 http://purl.bioontology.org/ontology/NCBITAXON/77643 denotes Mycobacterium tuberculosis
T26 1544-1556 http://purl.bioontology.org/ontology/NCBITAXON/1407443 denotes tuberculosis

GO-BP

Id Subject Object Predicate Lexical cue
T1 367-375 http://purl.obolibrary.org/obo/GO_0007349 denotes cellular
T2 367-385 http://purl.obolibrary.org/obo/GO_0009987 denotes cellular processes

GO-MF

Id Subject Object Predicate Lexical cue
T1 93-100 http://purl.obolibrary.org/obo/GO_0070026 denotes binding
T2 565-572 http://purl.obolibrary.org/obo/GO_0070026 denotes binding
T3 625-632 http://purl.obolibrary.org/obo/GO_0070026 denotes binding
T4 904-911 http://purl.obolibrary.org/obo/GO_0070026 denotes binding
T5 985-992 http://purl.obolibrary.org/obo/GO_0070026 denotes binding
T6 1126-1133 http://purl.obolibrary.org/obo/GO_0070026 denotes binding
T7 1257-1264 http://purl.obolibrary.org/obo/GO_0070026 denotes binding
T8 238-242 http://purl.obolibrary.org/obo/GO_0070026 denotes bind
T9 93-100 http://purl.obolibrary.org/obo/GO_0003680 denotes binding
T10 565-572 http://purl.obolibrary.org/obo/GO_0003680 denotes binding
T11 625-632 http://purl.obolibrary.org/obo/GO_0003680 denotes binding
T12 904-911 http://purl.obolibrary.org/obo/GO_0003680 denotes binding
T13 985-992 http://purl.obolibrary.org/obo/GO_0003680 denotes binding
T14 1126-1133 http://purl.obolibrary.org/obo/GO_0003680 denotes binding
T15 1257-1264 http://purl.obolibrary.org/obo/GO_0003680 denotes binding
T16 238-242 http://purl.obolibrary.org/obo/GO_0003680 denotes bind
T17 93-100 http://purl.obolibrary.org/obo/GO_0017091 denotes binding
T18 565-572 http://purl.obolibrary.org/obo/GO_0017091 denotes binding
T19 625-632 http://purl.obolibrary.org/obo/GO_0017091 denotes binding
T20 904-911 http://purl.obolibrary.org/obo/GO_0017091 denotes binding
T21 985-992 http://purl.obolibrary.org/obo/GO_0017091 denotes binding
T22 1126-1133 http://purl.obolibrary.org/obo/GO_0017091 denotes binding
T23 1257-1264 http://purl.obolibrary.org/obo/GO_0017091 denotes binding
T24 238-242 http://purl.obolibrary.org/obo/GO_0017091 denotes bind
T25 93-100 http://purl.obolibrary.org/obo/GO_0005488 denotes binding
T26 565-572 http://purl.obolibrary.org/obo/GO_0005488 denotes binding
T27 625-632 http://purl.obolibrary.org/obo/GO_0005488 denotes binding
T28 904-911 http://purl.obolibrary.org/obo/GO_0005488 denotes binding
T29 985-992 http://purl.obolibrary.org/obo/GO_0005488 denotes binding
T30 1126-1133 http://purl.obolibrary.org/obo/GO_0005488 denotes binding
T31 1257-1264 http://purl.obolibrary.org/obo/GO_0005488 denotes binding
T32 238-242 http://purl.obolibrary.org/obo/GO_0005488 denotes bind
T33 93-109 http://purl.obolibrary.org/obo/GO_0005515 denotes binding proteins
T34 565-581 http://purl.obolibrary.org/obo/GO_0005515 denotes binding proteins
T35 1674-1699 http://purl.obolibrary.org/obo/GO_0005515 denotes binding by these proteins
T36 1250-1264 http://purl.obolibrary.org/obo/GO_0070984 denotes set of binding
T37 1669-1699 http://purl.obolibrary.org/obo/GO_0005515 denotes acid binding by these proteins

EDAM-topics

Id Subject Object Predicate Lexical cue
T1 45-53 http://edamontology.org/topic_3168 denotes sequence
T2 45-53 http://edamontology.org/topic_0080 denotes sequence
T3 101-109 http://edamontology.org/topic_0078 denotes proteins
T4 293-301 http://edamontology.org/topic_0080 denotes sequence
T5 293-301 http://edamontology.org/topic_3168 denotes sequence
T6 293-310 http://edamontology.org/topic_3052 denotes sequence families
T7 367-385 http://edamontology.org/topic_2229 denotes cellular processes
T8 493-512 http://edamontology.org/topic_0081 denotes Structural analyses
T9 573-581 http://edamontology.org/topic_0078 denotes proteins
T10 685-695 http://edamontology.org/topic_3372 denotes algorithms
T11 822-830 http://edamontology.org/topic_0078 denotes proteins
T12 865-873 http://edamontology.org/topic_3168 denotes sequence
T13 865-873 http://edamontology.org/topic_0080 denotes sequence
T14 956-977 http://edamontology.org/topic_0143 denotes Structural comparison
T15 956-977 http://edamontology.org/topic_1770 denotes Structural comparison
T16 1159-1176 http://edamontology.org/topic_0166 denotes structural motifs
T17 1170-1176 http://edamontology.org/topic_0158 denotes motifs
T18 1219-1225 http://edamontology.org/topic_0158 denotes motifs
T19 1294-1300 http://edamontology.org/topic_0158 denotes motifs
T20 1390-1395 http://edamontology.org/topic_3678 denotes study
T21 1445-1453 http://edamontology.org/topic_0078 denotes proteins
T22 1481-1487 http://edamontology.org/topic_0622 denotes genome
T23 1506-1512 http://edamontology.org/topic_0158 denotes motifs
T24 1557-1565 http://edamontology.org/topic_0644 denotes proteome
T25 1557-1565 http://edamontology.org/topic_0121 denotes proteome
T26 1691-1699 http://edamontology.org/topic_0078 denotes proteins

EDAM-DFO

Id Subject Object Predicate Lexical cue
T1 7-18 http://edamontology.org/operation_2423 denotes recognition
T2 45-53 http://edamontology.org/operation_3218 denotes sequence
T3 45-53 http://edamontology.org/data_2044 denotes sequence
T4 58-68 http://edamontology.org/data_0883 denotes structural
T5 101-109 http://edamontology.org/data_1467 denotes proteins
T6 101-109 http://edamontology.org/format_1208 denotes proteins
T7 156-171 http://edamontology.org/data_2746 denotes monosaccharides
T8 293-301 http://edamontology.org/data_2044 denotes sequence
T9 293-301 http://edamontology.org/operation_3218 denotes sequence
T10 376-385 http://edamontology.org/operation_2409 denotes processes
T11 376-385 http://edamontology.org/operation_0004 denotes processes
T12 435-443 http://edamontology.org/data_1255 denotes features
T13 469-480 http://edamontology.org/operation_2423 denotes recognition
T14 493-503 http://edamontology.org/data_0883 denotes Structural
T15 493-512 http://edamontology.org/operation_2480 denotes Structural analyses
T16 535-539 http://edamontology.org/data_0006 denotes data
T17 535-543 http://edamontology.org/data_0006 denotes data set
T18 573-581 http://edamontology.org/data_1467 denotes proteins
T19 573-581 http://edamontology.org/format_1208 denotes proteins
T20 638-649 http://edamontology.org/operation_2424 denotes comparisons
T21 709-719 http://edamontology.org/operation_3432 denotes clustering
T22 785-796 http://edamontology.org/operation_2423 denotes recognition
T23 822-830 http://edamontology.org/data_1467 denotes proteins
T24 822-830 http://edamontology.org/format_1208 denotes proteins
T25 838-842 http://edamontology.org/data_0006 denotes data
T26 838-846 http://edamontology.org/data_0006 denotes data set
T27 865-873 http://edamontology.org/data_2044 denotes sequence
T28 865-873 http://edamontology.org/operation_3218 denotes sequence
T29 878-887 http://edamontology.org/data_0883 denotes structure
T30 949-954 http://edamontology.org/data_2100 denotes types
T31 956-966 http://edamontology.org/data_0883 denotes Structural
T32 956-977 http://edamontology.org/operation_2483 denotes Structural comparison
T33 956-977 http://edamontology.org/operation_2487 denotes Structural comparison
T34 956-977 http://edamontology.org/operation_2931 denotes Structural comparison
T35 967-977 http://edamontology.org/operation_2424 denotes comparison
T36 1074-1084 http://edamontology.org/data_0883 denotes structural
T37 1085-1093 http://edamontology.org/data_1255 denotes features
T38 1108-1116 http://edamontology.org/operation_3216 denotes scaffold
T39 1139-1144 http://edamontology.org/data_2100 denotes types
T40 1159-1169 http://edamontology.org/data_0883 denotes structural
T41 1276-1279 http://edamontology.org/format_1476 denotes PDB
T42 1332-1343 http://edamontology.org/operation_2423 denotes recognition
T43 1415-1424 http://edamontology.org/operation_2423 denotes detecting
T44 1425-1436 http://edamontology.org/operation_0004 denotes function in
T45 1445-1453 http://edamontology.org/format_1208 denotes proteins
T46 1445-1453 http://edamontology.org/data_1467 denotes proteins
T47 1469-1477 http://edamontology.org/operation_2945 denotes analysis
T48 1513-1526 http://edamontology.org/data_2852 denotes in structures
T49 1516-1526 http://edamontology.org/data_0883 denotes structures
T50 1557-1576 http://edamontology.org/data_0989 denotes proteome identified
T51 1566-1576 http://edamontology.org/data_0842 denotes identified
T52 1566-1576 http://edamontology.org/data_2611 denotes identified
T53 1618-1626 http://edamontology.org/data_1255 denotes features
T54 1691-1699 http://edamontology.org/format_1208 denotes proteins
T55 1691-1699 http://edamontology.org/data_1467 denotes proteins

GlyTouCan-IUPAC

Id Subject Object Predicate Lexical cue
GlycanIUPAC_T1 521-524 "http://rdf.glycoinfo.org/glycan/G02780QX" denotes non
GlycanIUPAC_T2 1236-1239 "http://rdf.glycoinfo.org/glycan/G02780QX" denotes non
GlycanIUPAC_T3 521-524 "http://rdf.glycoinfo.org/glycan/G18425DX" denotes non
GlycanIUPAC_T4 1236-1239 "http://rdf.glycoinfo.org/glycan/G18425DX" denotes non
GlycanIUPAC_T5 521-524 "http://rdf.glycoinfo.org/glycan/G18630JE" denotes non
GlycanIUPAC_T6 1236-1239 "http://rdf.glycoinfo.org/glycan/G18630JE" denotes non
GlycanIUPAC_T7 521-524 "http://rdf.glycoinfo.org/glycan/G01004IT" denotes non
GlycanIUPAC_T8 1236-1239 "http://rdf.glycoinfo.org/glycan/G01004IT" denotes non
GlycanIUPAC_T9 521-524 "http://rdf.glycoinfo.org/glycan/G87301QZ" denotes non
GlycanIUPAC_T10 1236-1239 "http://rdf.glycoinfo.org/glycan/G87301QZ" denotes non
GlycanIUPAC_T11 521-524 "http://rdf.glycoinfo.org/glycan/G39790GW" denotes non
GlycanIUPAC_T12 1236-1239 "http://rdf.glycoinfo.org/glycan/G39790GW" denotes non
GlycanIUPAC_T13 521-524 "http://rdf.glycoinfo.org/glycan/G42928BB" denotes non
GlycanIUPAC_T14 1236-1239 "http://rdf.glycoinfo.org/glycan/G42928BB" denotes non
GlycanIUPAC_T15 521-524 "http://rdf.glycoinfo.org/glycan/G51134HC" denotes non
GlycanIUPAC_T16 1236-1239 "http://rdf.glycoinfo.org/glycan/G51134HC" denotes non
GlycanIUPAC_T17 521-524 "http://rdf.glycoinfo.org/glycan/G68183GR" denotes non
GlycanIUPAC_T18 1236-1239 "http://rdf.glycoinfo.org/glycan/G68183GR" denotes non
GlycanIUPAC_T19 521-524 "http://rdf.glycoinfo.org/glycan/G46883FA" denotes non
GlycanIUPAC_T20 1236-1239 "http://rdf.glycoinfo.org/glycan/G46883FA" denotes non
GlycanIUPAC_T21 521-524 "http://rdf.glycoinfo.org/glycan/G54702VY" denotes non
GlycanIUPAC_T22 1236-1239 "http://rdf.glycoinfo.org/glycan/G54702VY" denotes non
GlycanIUPAC_T23 1014-1017 "http://rdf.glycoinfo.org/glycan/G41652MJ" denotes all
GlycanIUPAC_T24 1014-1017 "http://rdf.glycoinfo.org/glycan/G20761YC" denotes all
GlycanIUPAC_T25 1014-1017 "http://rdf.glycoinfo.org/glycan/G19807HM" denotes all
GlycanIUPAC_T26 1014-1017 "http://rdf.glycoinfo.org/glycan/G20351TE" denotes all
GlycanIUPAC_T27 1014-1017 "http://rdf.glycoinfo.org/glycan/G71957MR" denotes all
GlycanIUPAC_T28 1014-1017 "http://rdf.glycoinfo.org/glycan/G59040AE" denotes all
GlycanIUPAC_T29 1014-1017 "http://rdf.glycoinfo.org/glycan/G14987PW" denotes all
GlycanIUPAC_T30 1014-1017 "http://rdf.glycoinfo.org/glycan/G95064PC" denotes all
GlycanIUPAC_T31 1014-1017 "http://rdf.glycoinfo.org/glycan/G39143AQ" denotes all
GlycanIUPAC_T32 1014-1017 "http://rdf.glycoinfo.org/glycan/G65149OO" denotes all
GlycanIUPAC_T33 1014-1017 "http://rdf.glycoinfo.org/glycan/G02766SY" denotes all
GlycanIUPAC_T34 1014-1017 "http://rdf.glycoinfo.org/glycan/G26019KJ" denotes all
GlycanIUPAC_T35 1014-1017 "http://rdf.glycoinfo.org/glycan/G36429CZ" denotes all
GlycanIUPAC_T36 1014-1017 "http://rdf.glycoinfo.org/glycan/G89633TP" denotes all
GlycanIUPAC_T37 1014-1017 "http://rdf.glycoinfo.org/glycan/G28494FO" denotes all
GlycanIUPAC_T38 1014-1017 "http://rdf.glycoinfo.org/glycan/G06219CP" denotes all
GlycanIUPAC_T39 1014-1017 "http://rdf.glycoinfo.org/glycan/G44237SM" denotes all
GlycanIUPAC_T40 1014-1017 "http://rdf.glycoinfo.org/glycan/G57948RL" denotes all
GlycanIUPAC_T41 1014-1017 "http://rdf.glycoinfo.org/glycan/G64016DN" denotes all
GlycanIUPAC_T42 1014-1017 "http://rdf.glycoinfo.org/glycan/G14536PC" denotes all
GlycanIUPAC_T43 1014-1017 "http://rdf.glycoinfo.org/glycan/G14356FW" denotes all
GlycanIUPAC_T44 1014-1017 "http://rdf.glycoinfo.org/glycan/G34565UO" denotes all
GlycanIUPAC_T45 1014-1017 "http://rdf.glycoinfo.org/glycan/G67124MW" denotes all
GlycanIUPAC_T46 1014-1017 "http://rdf.glycoinfo.org/glycan/G71457ZU" denotes all
GlycanIUPAC_T47 1014-1017 "http://rdf.glycoinfo.org/glycan/G55228VZ" denotes all
GlycanIUPAC_T48 1014-1017 "http://rdf.glycoinfo.org/glycan/G31034MJ" denotes all
GlycanIUPAC_T49 1014-1017 "http://rdf.glycoinfo.org/glycan/G25776IP" denotes all
GlycanIUPAC_T50 1014-1017 "http://rdf.glycoinfo.org/glycan/G64442BV" denotes all
GlycanIUPAC_T51 1014-1017 "http://rdf.glycoinfo.org/glycan/G57018LE" denotes all
GlycanIUPAC_T52 1014-1017 "http://rdf.glycoinfo.org/glycan/G61761GX" denotes all
GlycanIUPAC_T53 1014-1017 "http://rdf.glycoinfo.org/glycan/G76318UX" denotes all
GlycanIUPAC_T54 1014-1017 "http://rdf.glycoinfo.org/glycan/G61906ER" denotes all
GlycanIUPAC_T55 1014-1017 "http://rdf.glycoinfo.org/glycan/G68723GR" denotes all
GlycanIUPAC_T56 1014-1017 "http://rdf.glycoinfo.org/glycan/G19540LE" denotes all
GlycanIUPAC_T57 1014-1017 "http://rdf.glycoinfo.org/glycan/G74944PO" denotes all
GlycanIUPAC_T58 1014-1017 "http://rdf.glycoinfo.org/glycan/G89489ZJ" denotes all
GlycanIUPAC_T59 1014-1017 "http://rdf.glycoinfo.org/glycan/G04434YU" denotes all
GlycanIUPAC_T60 1014-1017 "http://rdf.glycoinfo.org/glycan/G21450PB" denotes all
GlycanIUPAC_T61 1014-1017 "http://rdf.glycoinfo.org/glycan/G93629QY" denotes all
GlycanIUPAC_T62 1014-1017 "http://rdf.glycoinfo.org/glycan/G02603TR" denotes all
GlycanIUPAC_T63 1014-1017 "http://rdf.glycoinfo.org/glycan/G40280JP" denotes all
GlycanIUPAC_T64 1014-1017 "http://rdf.glycoinfo.org/glycan/G95259IC" denotes all
GlycanIUPAC_T65 1014-1017 "http://rdf.glycoinfo.org/glycan/G26900FE" denotes all
GlycanIUPAC_T66 1014-1017 "http://rdf.glycoinfo.org/glycan/G21346KK" denotes all
GlycanIUPAC_T67 1014-1017 "http://rdf.glycoinfo.org/glycan/G62509FF" denotes all
GlycanIUPAC_T68 1014-1017 "http://rdf.glycoinfo.org/glycan/G83932AK" denotes all
GlycanIUPAC_T69 1014-1017 "http://rdf.glycoinfo.org/glycan/G96978IB" denotes all
GlycanIUPAC_T70 1014-1017 "http://rdf.glycoinfo.org/glycan/G34275DN" denotes all
GlycanIUPAC_T71 1014-1017 "http://rdf.glycoinfo.org/glycan/G07071JF" denotes all
GlycanIUPAC_T72 1014-1017 "http://rdf.glycoinfo.org/glycan/G80639QD" denotes all
GlycanIUPAC_T73 1014-1017 "http://rdf.glycoinfo.org/glycan/G99460PJ" denotes all
GlycanIUPAC_T74 1014-1017 "http://rdf.glycoinfo.org/glycan/G22024BZ" denotes all
GlycanIUPAC_T75 1014-1017 "http://rdf.glycoinfo.org/glycan/G74097ZY" denotes all
GlycanIUPAC_T76 1014-1017 "http://rdf.glycoinfo.org/glycan/G84439YP" denotes all
GlycanIUPAC_T77 1014-1017 "http://rdf.glycoinfo.org/glycan/G52207WQ" denotes all
GlycanIUPAC_T78 1014-1017 "http://rdf.glycoinfo.org/glycan/G90695MS" denotes all
GlycanIUPAC_T79 1014-1017 "http://rdf.glycoinfo.org/glycan/G50398QX" denotes all
GlycanIUPAC_T80 1014-1017 "http://rdf.glycoinfo.org/glycan/G12166ZT" denotes all
GlycanIUPAC_T81 1014-1017 "http://rdf.glycoinfo.org/glycan/G48368BR" denotes all
GlycanIUPAC_T82 1014-1017 "http://rdf.glycoinfo.org/glycan/G57407RW" denotes all
GlycanIUPAC_T83 1014-1017 "http://rdf.glycoinfo.org/glycan/G00386TY" denotes all
GlycanIUPAC_T84 1014-1017 "http://rdf.glycoinfo.org/glycan/G18723JK" denotes all
GlycanIUPAC_T85 1014-1017 "http://rdf.glycoinfo.org/glycan/G93757OR" denotes all
GlycanIUPAC_T86 1014-1017 "http://rdf.glycoinfo.org/glycan/G29006SI" denotes all
GlycanIUPAC_T87 1014-1017 "http://rdf.glycoinfo.org/glycan/G03099OQ" denotes all
GlycanIUPAC_T88 1014-1017 "http://rdf.glycoinfo.org/glycan/G53739OW" denotes all
GlycanIUPAC_T89 1014-1017 "http://rdf.glycoinfo.org/glycan/G70440ZO" denotes all
GlycanIUPAC_T90 1014-1017 "http://rdf.glycoinfo.org/glycan/G29951RR" denotes all
GlycanIUPAC_T91 1014-1017 "http://rdf.glycoinfo.org/glycan/G58402TI" denotes all
GlycanIUPAC_T92 1014-1017 "http://rdf.glycoinfo.org/glycan/G39875TP" denotes all
GlycanIUPAC_T93 1014-1017 "http://rdf.glycoinfo.org/glycan/G83439QV" denotes all
GlycanIUPAC_T94 1014-1017 "http://rdf.glycoinfo.org/glycan/G41762RC" denotes all
GlycanIUPAC_T95 1014-1017 "http://rdf.glycoinfo.org/glycan/G91604UI" denotes all
GlycanIUPAC_T96 1014-1017 "http://rdf.glycoinfo.org/glycan/G88447WE" denotes all
GlycanIUPAC_T97 1014-1017 "http://rdf.glycoinfo.org/glycan/G93634BS" denotes all
GlycanIUPAC_T98 1014-1017 "http://rdf.glycoinfo.org/glycan/G02587BH" denotes all
GlycanIUPAC_T99 1014-1017 "http://rdf.glycoinfo.org/glycan/G43511MX" denotes all
GlycanIUPAC_T100 1014-1017 "http://rdf.glycoinfo.org/glycan/G64958DH" denotes all
GlycanIUPAC_T101 1014-1017 "http://rdf.glycoinfo.org/glycan/G30384TR" denotes all
GlycanIUPAC_T102 1014-1017 "http://rdf.glycoinfo.org/glycan/G15624EX" denotes all
GlycanIUPAC_T103 1014-1017 "http://rdf.glycoinfo.org/glycan/G22706ST" denotes all
GlycanIUPAC_T104 1014-1017 "http://rdf.glycoinfo.org/glycan/G57408PI" denotes all
GlycanIUPAC_T105 1014-1017 "http://rdf.glycoinfo.org/glycan/G86403XX" denotes all
GlycanIUPAC_T106 1014-1017 "http://rdf.glycoinfo.org/glycan/G78043YB" denotes all
GlycanIUPAC_T107 1014-1017 "http://rdf.glycoinfo.org/glycan/G18952JK" denotes all
GlycanIUPAC_T108 1014-1017 "http://rdf.glycoinfo.org/glycan/G49020ND" denotes all
GlycanIUPAC_T109 1014-1017 "http://rdf.glycoinfo.org/glycan/G63590YW" denotes all
GlycanIUPAC_T110 1014-1017 "http://rdf.glycoinfo.org/glycan/G22793KS" denotes all
GlycanIUPAC_T111 1014-1017 "http://rdf.glycoinfo.org/glycan/G64134SS" denotes all
GlycanIUPAC_T112 1014-1017 "http://rdf.glycoinfo.org/glycan/G17338HY" denotes all
GlycanIUPAC_T113 1014-1017 "http://rdf.glycoinfo.org/glycan/G99745XF" denotes all
GlycanIUPAC_T114 1014-1017 "http://rdf.glycoinfo.org/glycan/G27782HN" denotes all
GlycanIUPAC_T115 1014-1017 "http://rdf.glycoinfo.org/glycan/G57496DC" denotes all
GlycanIUPAC_T116 1014-1017 "http://rdf.glycoinfo.org/glycan/G93169WB" denotes all
GlycanIUPAC_T117 1014-1017 "http://rdf.glycoinfo.org/glycan/G05518TD" denotes all
GlycanIUPAC_T118 1014-1017 "http://rdf.glycoinfo.org/glycan/G62603DN" denotes all
GlycanIUPAC_T119 1014-1017 "http://rdf.glycoinfo.org/glycan/G59574FS" denotes all
GlycanIUPAC_T120 1014-1017 "http://rdf.glycoinfo.org/glycan/G47567WC" denotes all

mondo_disease

Id Subject Object Predicate Lexical cue mondo_id
T1 1544-1556 Disease denotes tuberculosis http://purl.obolibrary.org/obo/MONDO_0018076

HP-phenotype

Id Subject Object Predicate Lexical cue hp_id
T1 355-363 Phenotype denotes plethora HP:0001050

Lectin-Jamboree-Sentence

Id Subject Object Predicate Lexical cue
T1 0-110 Sentence denotes Common recognition principles across diverse sequence and structural families of sialic acid binding proteins.
T2 111-219 Sentence denotes Sialic acids form a large family of 9-carbon monosaccharides and are integral components of glycoconjugates.
T3 220-386 Sentence denotes They are known to bind to a wide range of receptors belonging to diverse sequence families and fold classes and are key mediators in a plethora of cellular processes.
T4 387-492 Sentence denotes Thus, it is of great interest to understand the features that give rise to such a recognition capability.
T5 493-808 Sentence denotes Structural analyses using a non-redundant data set of known sialic acid binding proteins was carried out, which included exhaustive binding site comparisons and site alignments using in-house algorithms, followed by clustering and tree computation, which has led to derivation of sialic acid recognition principles.
T6 809-955 Sentence denotes Although the proteins in the data set belong to several sequence and structure families, their binding sites could be grouped into only six types.
T7 956-1117 Sentence denotes Structural comparison of the binding sites indicates that all sites contain one or more different combinations of key structural features over a common scaffold.
T8 1118-1205 Sentence denotes The six binding site types thus serve as structural motifs for recognizing sialic acid.
T9 1206-1344 Sentence denotes Scanning the motifs against a non-redundant set of binding sites from PDB indicated the motifs to be specific for sialic acid recognition.
T10 1345-1454 Sentence denotes Knowledge of determinants obtained from this study will be useful for detecting function in unknown proteins.
T11 1455-1700 Sentence denotes As an example analysis, a genome-wide scan for the motifs in structures of Mycobacterium tuberculosis proteome identified 17 hits that contain combinations of the features, suggesting a possible function of sialic acid binding by these proteins.

NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T1 1530-1556 OrganismTaxon denotes Mycobacterium tuberculosis 1773

Anatomy-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 367-385 Body_part denotes cellular processes http://purl.obolibrary.org/obo/GO_0042995