PubMed:23708401
Annnotations
GlyCosmos15-Species
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| 30 | 732-737 | Species | denotes | human | 9606 |
CL-cell
| Id | Subject | Object | Predicate | Lexical cue | cl_id |
|---|---|---|---|---|---|
| T1 | 30-55 | Cell | denotes | mesenchymal stromal cells | http://purl.obolibrary.org/obo/CL:0000134 |
| T2 | 273-298 | Cell | denotes | mesenchymal stromal cells | http://purl.obolibrary.org/obo/CL:0000134 |
| T3 | 300-304 | Cell | denotes | MSCs | http://purl.obolibrary.org/obo/CL:0000134 |
| T4 | 767-771 | Cell | denotes | MSCs | http://purl.obolibrary.org/obo/CL:0000134 |
| T5 | 1336-1340 | Cell | denotes | MSCs | http://purl.obolibrary.org/obo/CL:0000134 |
| T6 | 1527-1531 | Cell | denotes | MSCs | http://purl.obolibrary.org/obo/CL:0000134 |
Glycan-Motif
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 443-454 | https://glytoucan.org/Structures/Glycans/G81533KY | denotes | sialic acid |
| T2 | 645-668 | https://glytoucan.org/Structures/Glycans/G50850NI | denotes | N-acetylneuraminic acid |
| T3 | 645-668 | https://glytoucan.org/Structures/Glycans/G81533KY | denotes | N-acetylneuraminic acid |
| T4 | 1022-1029 | https://glytoucan.org/Structures/Glycans/G00051MO | denotes | Lewis x |
| T5 | 1022-1029 | https://glytoucan.org/Structures/Glycans/G01187XC | denotes | Lewis x |
| T6 | 1033-1046 | https://glytoucan.org/Structures/Glycans/G00068MO | denotes | blood group H |
| T7 | 1033-1046 | https://glytoucan.org/Structures/Glycans/G43391VM | denotes | blood group H |
| T8 | 1033-1046 | https://glytoucan.org/Structures/Glycans/G50899UD | denotes | blood group H |
| T9 | 1065-1079 | https://glytoucan.org/Structures/Glycans/G00054MO | denotes | sialyl Lewis x |
| T10 | 1081-1085 | https://glytoucan.org/Structures/Glycans/G00054MO | denotes | sLex |
| T11 | 1132-1147 | https://glytoucan.org/Structures/Glycans/G00058MO | denotes | polylactosamine |
| T12 | 1298-1302 | https://glytoucan.org/Structures/Glycans/G00054MO | denotes | sLex |
| T13 | 1416-1420 | https://glytoucan.org/Structures/Glycans/G00054MO | denotes | sLex |
| T14 | 1497-1501 | https://glytoucan.org/Structures/Glycans/G00054MO | denotes | sLex |
GlyCosmos6-Glycan-Motif-Image
| Id | Subject | Object | Predicate | Lexical cue | image |
|---|---|---|---|---|---|
| T1 | 443-454 | Glycan_Motif | denotes | sialic acid | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G81533KY |
| T2 | 645-668 | Glycan_Motif | denotes | N-acetylneuraminic acid | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G81533KY|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G50850NI |
| T4 | 1022-1029 | Glycan_Motif | denotes | Lewis x | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G01187XC|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G00051MO |
| T6 | 1033-1046 | Glycan_Motif | denotes | blood group H | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G50899UD|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G43391VM|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G00068MO |
| T9 | 1065-1079 | Glycan_Motif | denotes | sialyl Lewis x | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G00054MO |
| T10 | 1072-1079 | Glycan_Motif | denotes | Lewis x | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G01187XC|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G00051MO |
| T12 | 1081-1085 | Glycan_Motif | denotes | sLex | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G00054MO |
| T13 | 1132-1147 | Glycan_Motif | denotes | polylactosamine | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G00058MO |
| T14 | 1298-1302 | Glycan_Motif | denotes | sLex | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G00054MO |
| T15 | 1416-1420 | Glycan_Motif | denotes | sLex | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G00054MO |
| T16 | 1497-1501 | Glycan_Motif | denotes | sLex | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G00054MO |
Glycosmos6-GlycoEpitope
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 1022-1029 | http://www.glycoepitope.jp/epitopes/EP0011 | denotes | Lewis x |
| T2 | 1065-1079 | http://www.glycoepitope.jp/epitopes/EP0012 | denotes | sialyl Lewis x |
| T3 | 1072-1079 | http://www.glycoepitope.jp/epitopes/EP0011 | denotes | Lewis x |
| T4 | 1081-1085 | http://www.glycoepitope.jp/epitopes/EP0012 | denotes | sLex |
| T5 | 1298-1302 | http://www.glycoepitope.jp/epitopes/EP0012 | denotes | sLex |
| T6 | 1416-1420 | http://www.glycoepitope.jp/epitopes/EP0012 | denotes | sLex |
| T7 | 1497-1501 | http://www.glycoepitope.jp/epitopes/EP0012 | denotes | sLex |
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| TextSentencer_T1 | 0-84 | Sentence | denotes | Metabolic glycoengineering of mesenchymal stromal cells with N-propanoylmannosamine. |
| TextSentencer_T2 | 85-214 | Sentence | denotes | There is an increasing interest in the modification of cell surface glycosylation to improve the properties of therapeutic cells. |
| TextSentencer_T3 | 215-306 | Sentence | denotes | For example, glycosylation affects the biodistribution of mesenchymal stromal cells (MSCs). |
| TextSentencer_T4 | 307-381 | Sentence | denotes | Metabolic glycoengineering is an efficient way to modify the cell surface. |
| TextSentencer_T5 | 382-555 | Sentence | denotes | The mammalian biosynthetic machinery tolerates the unnatural sialic acid precursor, N-propanoylmannosamine (ManNProp), and incorporates it into cell surface glycoconjugates. |
| TextSentencer_T6 | 556-799 | Sentence | denotes | We show here by mass spectrometric analysis of cell surface N-glycans that about half of N-acetylneuraminic acid was replaced by N-propanoylneuraminic acid in the N-glycans of human umbilical cord blood-derived MSCs supplemented with ManNProp. |
| TextSentencer_T7 | 800-846 | Sentence | denotes | In addition, the N-glycan profile was altered. |
| TextSentencer_T8 | 847-941 | Sentence | denotes | ManNProp-supplemented cells had more multiply fucosylated N-glycan species than control cells. |
| TextSentencer_T9 | 942-1087 | Sentence | denotes | The fucosylated epitopes were shown in tandem mass spectrometric analysis to be Lewis x or blood group H epitopes, but not sialyl Lewis x (sLex). |
| TextSentencer_T10 | 1088-1212 | Sentence | denotes | The amounts of tri- and tetra-antennary and polylactosamine-containing N-glycans also increased in ManNProp supplementation. |
| TextSentencer_T11 | 1213-1376 | Sentence | denotes | In accordance with previous studies of other cell types, increased expression of the sLex epitope in ManNProp-supplemented MSCs was demonstrated by flow cytometry. |
| TextSentencer_T12 | 1377-1599 | Sentence | denotes | In light of the N-glycan analysis, the sLex epitope in these cells is likely to be carried by O-glycans or glycolipids. sLex has been shown to target MSCs to bone marrow, which may be desirable in therapeutic applications. |
| TextSentencer_T13 | 1600-1843 | Sentence | denotes | The present results represent the first structural analysis of an N-glycome of ManNProp-supplemented cells and demonstrate the feasibility of modifying cell surface glycosylation of therapeutic cells by this type of metabolic glycoengineering. |
| T1 | 0-84 | Sentence | denotes | Metabolic glycoengineering of mesenchymal stromal cells with N-propanoylmannosamine. |
| T2 | 85-214 | Sentence | denotes | There is an increasing interest in the modification of cell surface glycosylation to improve the properties of therapeutic cells. |
| T3 | 215-306 | Sentence | denotes | For example, glycosylation affects the biodistribution of mesenchymal stromal cells (MSCs). |
| T4 | 307-381 | Sentence | denotes | Metabolic glycoengineering is an efficient way to modify the cell surface. |
| T5 | 382-555 | Sentence | denotes | The mammalian biosynthetic machinery tolerates the unnatural sialic acid precursor, N-propanoylmannosamine (ManNProp), and incorporates it into cell surface glycoconjugates. |
| T6 | 556-799 | Sentence | denotes | We show here by mass spectrometric analysis of cell surface N-glycans that about half of N-acetylneuraminic acid was replaced by N-propanoylneuraminic acid in the N-glycans of human umbilical cord blood-derived MSCs supplemented with ManNProp. |
| T7 | 800-846 | Sentence | denotes | In addition, the N-glycan profile was altered. |
| T8 | 847-941 | Sentence | denotes | ManNProp-supplemented cells had more multiply fucosylated N-glycan species than control cells. |
| T9 | 942-1087 | Sentence | denotes | The fucosylated epitopes were shown in tandem mass spectrometric analysis to be Lewis x or blood group H epitopes, but not sialyl Lewis x (sLex). |
| T10 | 1088-1212 | Sentence | denotes | The amounts of tri- and tetra-antennary and polylactosamine-containing N-glycans also increased in ManNProp supplementation. |
| T11 | 1213-1376 | Sentence | denotes | In accordance with previous studies of other cell types, increased expression of the sLex epitope in ManNProp-supplemented MSCs was demonstrated by flow cytometry. |
| T12 | 1377-1599 | Sentence | denotes | In light of the N-glycan analysis, the sLex epitope in these cells is likely to be carried by O-glycans or glycolipids. sLex has been shown to target MSCs to bone marrow, which may be desirable in therapeutic applications. |
| T13 | 1600-1843 | Sentence | denotes | The present results represent the first structural analysis of an N-glycome of ManNProp-supplemented cells and demonstrate the feasibility of modifying cell surface glycosylation of therapeutic cells by this type of metabolic glycoengineering. |
| T1 | 0-84 | Sentence | denotes | Metabolic glycoengineering of mesenchymal stromal cells with N-propanoylmannosamine. |
| T2 | 85-214 | Sentence | denotes | There is an increasing interest in the modification of cell surface glycosylation to improve the properties of therapeutic cells. |
| T3 | 215-306 | Sentence | denotes | For example, glycosylation affects the biodistribution of mesenchymal stromal cells (MSCs). |
| T4 | 307-381 | Sentence | denotes | Metabolic glycoengineering is an efficient way to modify the cell surface. |
| T5 | 382-555 | Sentence | denotes | The mammalian biosynthetic machinery tolerates the unnatural sialic acid precursor, N-propanoylmannosamine (ManNProp), and incorporates it into cell surface glycoconjugates. |
| T6 | 556-799 | Sentence | denotes | We show here by mass spectrometric analysis of cell surface N-glycans that about half of N-acetylneuraminic acid was replaced by N-propanoylneuraminic acid in the N-glycans of human umbilical cord blood-derived MSCs supplemented with ManNProp. |
| T7 | 800-846 | Sentence | denotes | In addition, the N-glycan profile was altered. |
| T8 | 847-941 | Sentence | denotes | ManNProp-supplemented cells had more multiply fucosylated N-glycan species than control cells. |
| T9 | 942-1087 | Sentence | denotes | The fucosylated epitopes were shown in tandem mass spectrometric analysis to be Lewis x or blood group H epitopes, but not sialyl Lewis x (sLex). |
| T10 | 1088-1212 | Sentence | denotes | The amounts of tri- and tetra-antennary and polylactosamine-containing N-glycans also increased in ManNProp supplementation. |
| T11 | 1213-1376 | Sentence | denotes | In accordance with previous studies of other cell types, increased expression of the sLex epitope in ManNProp-supplemented MSCs was demonstrated by flow cytometry. |
| T12 | 1377-1599 | Sentence | denotes | In light of the N-glycan analysis, the sLex epitope in these cells is likely to be carried by O-glycans or glycolipids. sLex has been shown to target MSCs to bone marrow, which may be desirable in therapeutic applications. |
| T13 | 1600-1843 | Sentence | denotes | The present results represent the first structural analysis of an N-glycome of ManNProp-supplemented cells and demonstrate the feasibility of modifying cell surface glycosylation of therapeutic cells by this type of metabolic glycoengineering. |
GlyCosmos6-Glycan-Motif-Structure
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 443-454 | https://glytoucan.org/Structures/Glycans/G81533KY | denotes | sialic acid |
| T2 | 645-668 | https://glytoucan.org/Structures/Glycans/G50850NI | denotes | N-acetylneuraminic acid |
| T3 | 645-668 | https://glytoucan.org/Structures/Glycans/G81533KY | denotes | N-acetylneuraminic acid |
| T4 | 1022-1029 | https://glytoucan.org/Structures/Glycans/G00051MO | denotes | Lewis x |
| T5 | 1022-1029 | https://glytoucan.org/Structures/Glycans/G01187XC | denotes | Lewis x |
| T6 | 1033-1046 | https://glytoucan.org/Structures/Glycans/G00068MO | denotes | blood group H |
| T7 | 1033-1046 | https://glytoucan.org/Structures/Glycans/G43391VM | denotes | blood group H |
| T8 | 1033-1046 | https://glytoucan.org/Structures/Glycans/G50899UD | denotes | blood group H |
| T9 | 1065-1079 | https://glytoucan.org/Structures/Glycans/G00054MO | denotes | sialyl Lewis x |
| T10 | 1072-1079 | https://glytoucan.org/Structures/Glycans/G00051MO | denotes | Lewis x |
| T11 | 1072-1079 | https://glytoucan.org/Structures/Glycans/G01187XC | denotes | Lewis x |
| T12 | 1081-1085 | https://glytoucan.org/Structures/Glycans/G00054MO | denotes | sLex |
| T13 | 1132-1147 | https://glytoucan.org/Structures/Glycans/G00058MO | denotes | polylactosamine |
| T14 | 1298-1302 | https://glytoucan.org/Structures/Glycans/G00054MO | denotes | sLex |
| T15 | 1416-1420 | https://glytoucan.org/Structures/Glycans/G00054MO | denotes | sLex |
| T16 | 1497-1501 | https://glytoucan.org/Structures/Glycans/G00054MO | denotes | sLex |
Glycosmos6-MAT
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 738-752 | http://purl.obolibrary.org/obo/MAT_0000280 | denotes | umbilical cord |
| T2 | 753-758 | http://purl.obolibrary.org/obo/MAT_0000083 | denotes | blood |
| T3 | 753-758 | http://purl.obolibrary.org/obo/MAT_0000315 | denotes | blood |
| T4 | 1033-1038 | http://purl.obolibrary.org/obo/MAT_0000083 | denotes | blood |
| T5 | 1033-1038 | http://purl.obolibrary.org/obo/MAT_0000315 | denotes | blood |
| T6 | 1535-1546 | http://purl.obolibrary.org/obo/MAT_0000084 | denotes | bone marrow |
| T7 | 1535-1539 | http://purl.obolibrary.org/obo/MAT_0000299 | denotes | bone |
ICD10
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 1252-1268 | http://purl.bioontology.org/ontology/ICD10/C95.7 | denotes | other cell types |
GlycoBiology-FMA
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| _T1 | 30-55 | FMAID:171387 | denotes | mesenchymal stromal cells |
| _T2 | 30-55 | FMAID:70546 | denotes | mesenchymal stromal cells |
| _T3 | 42-55 | FMAID:83624 | denotes | stromal cells |
| _T4 | 42-55 | FMAID:197708 | denotes | stromal cells |
| _T5 | 50-55 | FMAID:68646 | denotes | cells |
| _T6 | 50-55 | FMAID:169002 | denotes | cells |
| _T7 | 140-152 | FMAID:200942 | denotes | cell surface |
| _T8 | 140-152 | FMAID:212684 | denotes | cell surface |
| _T9 | 145-152 | FMAID:146300 | denotes | surface |
| _T10 | 145-152 | FMAID:50594 | denotes | surface |
| _T11 | 208-213 | FMAID:68646 | denotes | cells |
| _T12 | 208-213 | FMAID:169002 | denotes | cells |
| _T13 | 273-298 | FMAID:70546 | denotes | mesenchymal stromal cells |
| _T14 | 273-298 | FMAID:171387 | denotes | mesenchymal stromal cells |
| _T15 | 285-298 | FMAID:83624 | denotes | stromal cells |
| _T16 | 285-298 | FMAID:197708 | denotes | stromal cells |
| _T17 | 293-298 | FMAID:169002 | denotes | cells |
| _T18 | 293-298 | FMAID:68646 | denotes | cells |
| _T19 | 368-380 | FMAID:212684 | denotes | cell surface |
| _T20 | 368-380 | FMAID:200942 | denotes | cell surface |
| _T21 | 373-380 | FMAID:146300 | denotes | surface |
| _T22 | 373-380 | FMAID:50594 | denotes | surface |
| _T23 | 526-538 | FMAID:200942 | denotes | cell surface |
| _T24 | 526-538 | FMAID:212684 | denotes | cell surface |
| _T25 | 531-538 | FMAID:50594 | denotes | surface |
| _T26 | 531-538 | FMAID:146300 | denotes | surface |
| _T27 | 539-554 | FMAID:196776 | denotes | glycoconjugates |
| _T28 | 539-554 | FMAID:82782 | denotes | glycoconjugates |
| _T29 | 603-615 | FMAID:212684 | denotes | cell surface |
| _T30 | 603-615 | FMAID:200942 | denotes | cell surface |
| _T31 | 608-615 | FMAID:50594 | denotes | surface |
| _T32 | 608-615 | FMAID:146300 | denotes | surface |
| _T33 | 645-668 | FMAID:196783 | denotes | N-acetylneuraminic acid |
| _T34 | 645-668 | FMAID:196782 | denotes | N-acetylneuraminic acid |
| _T35 | 645-668 | FMAID:82788 | denotes | N-acetylneuraminic acid |
| _T36 | 645-668 | FMAID:82789 | denotes | N-acetylneuraminic acid |
| _T37 | 645-668 | FMAID:196794 | denotes | N-acetylneuraminic acid |
| _T38 | 645-668 | FMAID:82799 | denotes | N-acetylneuraminic acid |
| _T39 | 738-752 | FMAID:199963 | denotes | umbilical cord |
| _T40 | 738-752 | FMAID:85541 | denotes | umbilical cord |
| _T41 | 753-758 | FMAID:256053 | denotes | blood |
| _T42 | 869-874 | FMAID:68646 | denotes | cells |
| _T43 | 869-874 | FMAID:169002 | denotes | cells |
| _T44 | 935-940 | FMAID:68646 | denotes | cells |
| _T45 | 935-940 | FMAID:169002 | denotes | cells |
| _T46 | 1033-1038 | FMAID:256053 | denotes | blood |
| _T47 | 1438-1443 | FMAID:169002 | denotes | cells |
| _T48 | 1438-1443 | FMAID:68646 | denotes | cells |
| _T49 | 1484-1495 | FMAID:196773 | denotes | glycolipids |
| _T50 | 1484-1495 | FMAID:82780 | denotes | glycolipids |
| _T51 | 1535-1539 | FMAID:30317 | denotes | bone |
| _T52 | 1535-1539 | FMAID:172618 | denotes | bone |
| _T53 | 1535-1539 | FMAID:123537 | denotes | bone |
| _T54 | 1535-1546 | FMAID:97498 | denotes | bone marrow |
| _T55 | 1535-1546 | FMAID:9608 | denotes | bone marrow |
| _T56 | 1701-1706 | FMAID:169002 | denotes | cells |
| _T57 | 1701-1706 | FMAID:68646 | denotes | cells |
| _T58 | 1752-1764 | FMAID:212684 | denotes | cell surface |
| _T59 | 1752-1764 | FMAID:200942 | denotes | cell surface |
| _T60 | 1757-1764 | FMAID:146300 | denotes | surface |
| _T61 | 1757-1764 | FMAID:50594 | denotes | surface |
| _T62 | 1794-1799 | FMAID:169002 | denotes | cells |
| _T63 | 1794-1799 | FMAID:68646 | denotes | cells |
uniprot-human
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 645-668 | http://www.uniprot.org/uniprot/Q9BXD5 | denotes | N-acetylneuraminic acid |
| T2 | 645-668 | http://www.uniprot.org/uniprot/Q9NR45 | denotes | N-acetylneuraminic acid |
GlycoBiology-NCBITAXON
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 50-55 | http://purl.bioontology.org/ontology/STY/T025 | denotes | cells |
| T2 | 208-213 | http://purl.bioontology.org/ontology/STY/T025 | denotes | cells |
| T3 | 293-298 | http://purl.bioontology.org/ontology/STY/T025 | denotes | cells |
| T4 | 869-874 | http://purl.bioontology.org/ontology/STY/T025 | denotes | cells |
| T5 | 935-940 | http://purl.bioontology.org/ontology/STY/T025 | denotes | cells |
| T6 | 1039-1044 | http://purl.bioontology.org/ontology/STY/T096 | denotes | group |
| T7 | 1112-1117 | http://purl.bioontology.org/ontology/NCBITAXON/85284 | denotes | tetra |
| T8 | 1112-1117 | http://purl.bioontology.org/ontology/NCBITAXON/1310384 | denotes | tetra |
| T9 | 1118-1127 | http://purl.bioontology.org/ontology/NCBITAXON/293542 | denotes | antennary |
| T10 | 1438-1443 | http://purl.bioontology.org/ontology/STY/T025 | denotes | cells |
| T11 | 1701-1706 | http://purl.bioontology.org/ontology/STY/T025 | denotes | cells |
| T12 | 1794-1799 | http://purl.bioontology.org/ontology/STY/T025 | denotes | cells |
GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-9 | http://purl.obolibrary.org/obo/GO_0008152 | denotes | Metabolic |
| T2 | 307-316 | http://purl.obolibrary.org/obo/GO_0008152 | denotes | Metabolic |
| T3 | 1816-1825 | http://purl.obolibrary.org/obo/GO_0008152 | denotes | metabolic |
| T4 | 140-166 | http://purl.obolibrary.org/obo/GO_0033575 | denotes | cell surface glycosylation |
| T5 | 1752-1778 | http://purl.obolibrary.org/obo/GO_0033575 | denotes | cell surface glycosylation |
| T6 | 153-166 | http://purl.obolibrary.org/obo/GO_0070085 | denotes | glycosylation |
| T7 | 228-241 | http://purl.obolibrary.org/obo/GO_0070085 | denotes | glycosylation |
| T8 | 1765-1778 | http://purl.obolibrary.org/obo/GO_0070085 | denotes | glycosylation |
| T9 | 300-304 | http://purl.obolibrary.org/obo/GO_0043854 | denotes | MSCs |
| T10 | 767-771 | http://purl.obolibrary.org/obo/GO_0043854 | denotes | MSCs |
| T11 | 1336-1340 | http://purl.obolibrary.org/obo/GO_0043854 | denotes | MSCs |
| T12 | 1527-1531 | http://purl.obolibrary.org/obo/GO_0043854 | denotes | MSCs |
| T13 | 893-904 | http://purl.obolibrary.org/obo/GO_0036065 | denotes | fucosylated |
| T14 | 946-957 | http://purl.obolibrary.org/obo/GO_0036065 | denotes | fucosylated |
| T15 | 893-913 | http://purl.obolibrary.org/obo/GO_0036071 | denotes | fucosylated N-glycan |
| T16 | 1065-1071 | http://purl.obolibrary.org/obo/GO_0097503 | denotes | sialyl |
GO-CC
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 50-55 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T2 | 208-213 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T3 | 293-298 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T4 | 869-874 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T5 | 935-940 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T6 | 1438-1443 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T7 | 1701-1706 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T8 | 140-144 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
| T9 | 368-372 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
| T10 | 526-530 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
| T11 | 603-607 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
| T12 | 1258-1262 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
| T13 | 1752-1756 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
| T14 | 140-152 | http://purl.obolibrary.org/obo/GO_0009986 | denotes | cell surface |
| T15 | 368-380 | http://purl.obolibrary.org/obo/GO_0009986 | denotes | cell surface |
| T16 | 526-538 | http://purl.obolibrary.org/obo/GO_0009986 | denotes | cell surface |
| T17 | 603-615 | http://purl.obolibrary.org/obo/GO_0009986 | denotes | cell surface |
| T18 | 1752-1764 | http://purl.obolibrary.org/obo/GO_0009986 | denotes | cell surface |
UBERON-AE
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 30-41 | http://purl.obolibrary.org/obo/UBERON_0003104 | denotes | mesenchymal |
| T2 | 273-284 | http://purl.obolibrary.org/obo/UBERON_0003104 | denotes | mesenchymal |
| T3 | 738-752 | http://purl.obolibrary.org/obo/UBERON_0002331 | denotes | umbilical cord |
| T4 | 738-758 | http://purl.obolibrary.org/obo/UBERON_0012168 | denotes | umbilical cord blood |
| T5 | 753-758 | http://purl.obolibrary.org/obo/UBERON_0000178 | denotes | blood |
| T6 | 1033-1038 | http://purl.obolibrary.org/obo/UBERON_0000178 | denotes | blood |
| T7 | 1535-1546 | http://purl.obolibrary.org/obo/UBERON_0002371 | denotes | bone marrow |
Allie
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| SS1_23708401_2_0 | 273-298 | expanded | denotes | mesenchymal stromal cells |
| SS2_23708401_2_0 | 300-304 | abbr | denotes | MSCs |
| SS1_23708401_4_0 | 409-488 | expanded | denotes | machinery tolerates the unnatural sialic acid precursor, N-propanoylmannosamine |
| SS2_23708401_4_0 | 490-498 | abbr | denotes | ManNProp |
| SS1_23708401_8_0 | 1065-1079 | expanded | denotes | sialyl Lewis x |
| SS2_23708401_8_0 | 1081-1085 | abbr | denotes | sLex |
| AE1_23708401_2_0 | SS1_23708401_2_0 | SS2_23708401_2_0 | abbreviatedTo | mesenchymal stromal cells,MSCs |
| AE1_23708401_4_0 | SS1_23708401_4_0 | SS2_23708401_4_0 | abbreviatedTo | "machinery tolerates the unnatural sialic acid precursor, N-propanoylmannosamine",ManNProp |
| AE1_23708401_8_0 | SS1_23708401_8_0 | SS2_23708401_8_0 | abbreviatedTo | sialyl Lewis x,sLex |
GlycoBiology-MAT
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 738-752 | http://purl.obolibrary.org/obo/MAT_0000280 | denotes | umbilical cord |
| T2 | 753-758 | http://purl.obolibrary.org/obo/MAT_0000083 | denotes | blood |
| T3 | 753-758 | http://purl.obolibrary.org/obo/MAT_0000315 | denotes | blood |
| T4 | 1033-1038 | http://purl.obolibrary.org/obo/MAT_0000315 | denotes | blood |
| T5 | 1033-1038 | http://purl.obolibrary.org/obo/MAT_0000083 | denotes | blood |
| T6 | 1535-1539 | http://purl.obolibrary.org/obo/MAT_0000299 | denotes | bone |
| T7 | 1535-1546 | http://purl.obolibrary.org/obo/MAT_0000084 | denotes | bone marrow |
performance-test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| PD-UBERON-AE-B_T1 | 1535-1546 | http://purl.obolibrary.org/obo/UBERON_0002371 | denotes | bone marrow |
| PD-UBERON-AE-B_T2 | 753-758 | http://purl.obolibrary.org/obo/UBERON_0000178 | denotes | blood |
| PD-UBERON-AE-B_T3 | 1033-1038 | http://purl.obolibrary.org/obo/UBERON_0000178 | denotes | blood |
| PD-UBERON-AE-B_T4 | 30-41 | http://purl.obolibrary.org/obo/UBERON_0003104 | denotes | mesenchymal |
| PD-UBERON-AE-B_T5 | 273-284 | http://purl.obolibrary.org/obo/UBERON_0003104 | denotes | mesenchymal |
| PD-UBERON-AE-B_T6 | 738-752 | http://purl.obolibrary.org/obo/UBERON_0002331 | denotes | umbilical cord |
| PD-UBERON-AE-B_T7 | 738-758 | http://purl.obolibrary.org/obo/UBERON_0012168 | denotes | umbilical cord blood |
GlycoBiology-Motifs
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 616-625 | http://rdf.glycoinfo.org/glycan/G00027MO | denotes | N-glycans |
| T2 | 719-728 | http://rdf.glycoinfo.org/glycan/G00027MO | denotes | N-glycans |
| T3 | 817-825 | http://rdf.glycoinfo.org/glycan/G00027MO | denotes | N-glycan |
| T4 | 905-913 | http://rdf.glycoinfo.org/glycan/G00027MO | denotes | N-glycan |
| T5 | 1393-1401 | http://rdf.glycoinfo.org/glycan/G00027MO | denotes | N-glycan |
| T6 | 1022-1027 | http://rdf.glycoinfo.org/glycan/G00047MO | denotes | Lewis |
| T7 | 1072-1077 | http://rdf.glycoinfo.org/glycan/G00047MO | denotes | Lewis |
| T8 | 1022-1029 | http://rdf.glycoinfo.org/glycan/G00051MO | denotes | Lewis x |
| T9 | 1072-1079 | http://rdf.glycoinfo.org/glycan/G00051MO | denotes | Lewis x |
| T10 | 1033-1044 | http://rdf.glycoinfo.org/glycan/G00066MO | denotes | blood group |
| T11 | 1033-1046 | http://rdf.glycoinfo.org/glycan/G00068MO | denotes | blood group H |
| T12 | 1065-1077 | http://rdf.glycoinfo.org/glycan/G00053MO | denotes | sialyl Lewis |
| T13 | 1065-1079 | http://rdf.glycoinfo.org/glycan/G00054MO | denotes | sialyl Lewis x |
| T14 | 1081-1085 | http://rdf.glycoinfo.org/glycan/G00054MO | denotes | sLex |
| T15 | 1298-1302 | http://rdf.glycoinfo.org/glycan/G00054MO | denotes | sLex |
| T16 | 1416-1420 | http://rdf.glycoinfo.org/glycan/G00054MO | denotes | sLex |
| T17 | 1497-1501 | http://rdf.glycoinfo.org/glycan/G00054MO | denotes | sLex |
| T18 | 1132-1147 | http://rdf.glycoinfo.org/glycan/G00058MO | denotes | polylactosamine |
GlycoBiology-Epitope
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| PD-GlycoEpitope-B_T1 | 1022-1029 | http://www.glycoepitope.jp/epitopes/EP0011 | denotes | Lewis x |
| PD-GlycoEpitope-B_T2 | 1072-1079 | http://www.glycoepitope.jp/epitopes/EP0011 | denotes | Lewis x |
| PD-GlycoEpitope-B_T3 | 1065-1077 | http://www.glycoepitope.jp/epitopes/EP0008 | denotes | sialyl Lewis |
| PD-GlycoEpitope-B_T4 | 1065-1079 | http://www.glycoepitope.jp/epitopes/EP0012 | denotes | sialyl Lewis x |
GlyTouCan-IUPAC
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| GlycanIUPAC_T1 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G44384WF" | denotes | tri |
| GlycanIUPAC_T2 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G37452RG" | denotes | tri |
| GlycanIUPAC_T3 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G56296FC" | denotes | tri |
| GlycanIUPAC_T4 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G44877OG" | denotes | tri |
| GlycanIUPAC_T5 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G22627HB" | denotes | tri |
| GlycanIUPAC_T6 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G76069IP" | denotes | tri |
| GlycanIUPAC_T7 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G77301LL" | denotes | tri |
| GlycanIUPAC_T8 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G92446EV" | denotes | tri |
| GlycanIUPAC_T9 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G93798MG" | denotes | tri |
| GlycanIUPAC_T10 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G19180VS" | denotes | tri |
| GlycanIUPAC_T11 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G00261CT" | denotes | tri |
| GlycanIUPAC_T12 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G23925MM" | denotes | tri |
| GlycanIUPAC_T13 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G27176LA" | denotes | tri |
| GlycanIUPAC_T14 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G76226NF" | denotes | tri |
| GlycanIUPAC_T15 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G80006GG" | denotes | tri |
| GlycanIUPAC_T16 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G99968MY" | denotes | tri |
| GlycanIUPAC_T17 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G67393MB" | denotes | tri |
| GlycanIUPAC_T18 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G09037VU" | denotes | tri |
| GlycanIUPAC_T19 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G19508PX" | denotes | tri |
| GlycanIUPAC_T20 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G40619ZS" | denotes | tri |
| GlycanIUPAC_T21 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G19507SX" | denotes | tri |
| GlycanIUPAC_T22 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G50874XT" | denotes | tri |
| GlycanIUPAC_T23 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G60561GL" | denotes | tri |
| GlycanIUPAC_T24 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G98788DE" | denotes | tri |
| GlycanIUPAC_T25 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G85696MX" | denotes | tri |
| GlycanIUPAC_T26 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G82652IN" | denotes | tri |
| GlycanIUPAC_T27 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G95603AK" | denotes | tri |
| GlycanIUPAC_T28 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G87993NJ" | denotes | tri |
| GlycanIUPAC_T29 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G85533KK" | denotes | tri |
| GlycanIUPAC_T30 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G78142NX" | denotes | tri |
| GlycanIUPAC_T31 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G94944YR" | denotes | tri |
| GlycanIUPAC_T32 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G60875EM" | denotes | tri |
| GlycanIUPAC_T33 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G58390SD" | denotes | tri |
| GlycanIUPAC_T34 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G46314WZ" | denotes | tri |
| GlycanIUPAC_T35 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G35012MY" | denotes | tri |
| GlycanIUPAC_T36 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G11847VZ" | denotes | tri |
| GlycanIUPAC_T37 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G91662AB" | denotes | tri |
| GlycanIUPAC_T38 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G99771WN" | denotes | tri |
| GlycanIUPAC_T39 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G92389SI" | denotes | tri |
| GlycanIUPAC_T40 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G40437FC" | denotes | tri |
| GlycanIUPAC_T41 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G00509WV" | denotes | tri |
| GlycanIUPAC_T42 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G36565LB" | denotes | tri |
| GlycanIUPAC_T43 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G50335BH" | denotes | tri |
| GlycanIUPAC_T44 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G87946UV" | denotes | tri |
| GlycanIUPAC_T45 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G99103VB" | denotes | tri |
| GlycanIUPAC_T46 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G99530XJ" | denotes | tri |
| GlycanIUPAC_T47 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G64132OC" | denotes | tri |
| GlycanIUPAC_T48 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G96071SL" | denotes | tri |
| GlycanIUPAC_T49 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G11932TO" | denotes | tri |
| GlycanIUPAC_T50 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G71952HE" | denotes | tri |
| GlycanIUPAC_T51 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G40960ZM" | denotes | tri |
| GlycanIUPAC_T52 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G99023OP" | denotes | tri |
| GlycanIUPAC_T53 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G75940FW" | denotes | tri |
| GlycanIUPAC_T54 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G05449DN" | denotes | tri |
| GlycanIUPAC_T55 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G12045NX" | denotes | tri |
| GlycanIUPAC_T56 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G23531GF" | denotes | tri |
| GlycanIUPAC_T57 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G83439GF" | denotes | tri |
| GlycanIUPAC_T58 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G38120XA" | denotes | tri |
| GlycanIUPAC_T59 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G09257XC" | denotes | tri |
| GlycanIUPAC_T60 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G67867AY" | denotes | tri |
| GlycanIUPAC_T61 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G70826LI" | denotes | tri |
| GlycanIUPAC_T62 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G01893YT" | denotes | tri |
| GlycanIUPAC_T63 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G57032UK" | denotes | tri |
| GlycanIUPAC_T64 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G82566JW" | denotes | tri |
| GlycanIUPAC_T65 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G03647LB" | denotes | tri |
| GlycanIUPAC_T66 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G30298YA" | denotes | tri |
| GlycanIUPAC_T67 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G12237BJ" | denotes | tri |
| GlycanIUPAC_T68 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G35293BQ" | denotes | tri |
| GlycanIUPAC_T69 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G56939XC" | denotes | tri |
| GlycanIUPAC_T70 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G57481VS" | denotes | tri |
| GlycanIUPAC_T71 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G12760VJ" | denotes | tri |
| GlycanIUPAC_T72 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G78749LG" | denotes | tri |
| GlycanIUPAC_T73 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G18179BX" | denotes | tri |
| GlycanIUPAC_T74 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G97803IP" | denotes | tri |
| GlycanIUPAC_T75 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G98770PI" | denotes | tri |
| GlycanIUPAC_T76 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G48944LU" | denotes | tri |
| GlycanIUPAC_T77 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G68361HD" | denotes | tri |
| GlycanIUPAC_T78 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G57043GW" | denotes | tri |
| GlycanIUPAC_T79 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G68666JO" | denotes | tri |
| GlycanIUPAC_T80 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G52284HH" | denotes | tri |
| GlycanIUPAC_T81 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G48271RR" | denotes | tri |
| GlycanIUPAC_T82 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G28222XB" | denotes | tri |
| GlycanIUPAC_T83 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G69666WN" | denotes | tri |
| GlycanIUPAC_T84 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G00846QB" | denotes | tri |
| GlycanIUPAC_T85 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G34497XL" | denotes | tri |
| GlycanIUPAC_T86 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G83093ZM" | denotes | tri |
| GlycanIUPAC_T87 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G07756TT" | denotes | tri |
| GlycanIUPAC_T88 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G26740FE" | denotes | tri |
| GlycanIUPAC_T89 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G32930YQ" | denotes | tri |
| GlycanIUPAC_T90 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G75215RK" | denotes | tri |
| GlycanIUPAC_T91 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G98272YB" | denotes | tri |
| GlycanIUPAC_T92 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G71155WF" | denotes | tri |
| GlycanIUPAC_T93 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G56744IY" | denotes | tri |
| GlycanIUPAC_T94 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G38394RH" | denotes | tri |
| GlycanIUPAC_T95 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G11815AV" | denotes | tri |
| GlycanIUPAC_T96 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G62676XB" | denotes | tri |
| GlycanIUPAC_T97 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G96377XW" | denotes | tri |
| GlycanIUPAC_T98 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G99347BR" | denotes | tri |
| GlycanIUPAC_T99 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G70803WR" | denotes | tri |
| GlycanIUPAC_T100 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G88778DU" | denotes | tri |
| GlycanIUPAC_T101 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G07971EH" | denotes | tri |
| GlycanIUPAC_T102 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G95272JN" | denotes | tri |
| GlycanIUPAC_T103 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G55109ZG" | denotes | tri |
| GlycanIUPAC_T104 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G71585SL" | denotes | tri |
| GlycanIUPAC_T105 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G07197CP" | denotes | tri |
| GlycanIUPAC_T106 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G17730NT" | denotes | tri |
| GlycanIUPAC_T107 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G34903LH" | denotes | tri |
| GlycanIUPAC_T108 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G65660GA" | denotes | tri |
| GlycanIUPAC_T109 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G48172IK" | denotes | tri |
| GlycanIUPAC_T110 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G20725CN" | denotes | tri |
| GlycanIUPAC_T111 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G50853HE" | denotes | tri |
| GlycanIUPAC_T112 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G18401GJ" | denotes | tri |
| GlycanIUPAC_T113 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G89755ME" | denotes | tri |
| GlycanIUPAC_T114 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G58581FW" | denotes | tri |
| GlycanIUPAC_T115 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G84356OA" | denotes | tri |
| GlycanIUPAC_T116 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G48553NO" | denotes | tri |
| GlycanIUPAC_T117 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G86886IB" | denotes | tri |
| GlycanIUPAC_T118 | 1103-1106 | "http://rdf.glycoinfo.org/glycan/G22655ST" | denotes | tri |
GlyCosmos15-Glycan
| Id | Subject | Object | Predicate | Lexical cue | image |
|---|---|---|---|---|---|
| T1 | 1022-1029 | Glycan | denotes | Lewis x | https://api.glycosmos.org/wurcs2image/latest/png/binary/G00051MO |
| T2 | 1033-1046 | Glycan | denotes | blood group H | https://api.glycosmos.org/wurcs2image/latest/png/binary/G00068MO |
| T3 | 1065-1079 | Glycan | denotes | sialyl Lewis x | https://api.glycosmos.org/wurcs2image/latest/png/binary/G00054MO |
| T4 | 1081-1085 | Glycan | denotes | sLex | https://api.glycosmos.org/wurcs2image/latest/png/binary/G00054MO |
| T5 | 1298-1302 | Glycan | denotes | sLex | https://api.glycosmos.org/wurcs2image/latest/png/binary/G00054MO |
| T6 | 1416-1420 | Glycan | denotes | sLex | https://api.glycosmos.org/wurcs2image/latest/png/binary/G00054MO |
| T7 | 1497-1501 | Glycan | denotes | sLex | https://api.glycosmos.org/wurcs2image/latest/png/binary/G00054MO |
Glycan-GlyCosmos
| Id | Subject | Object | Predicate | Lexical cue | image |
|---|---|---|---|---|---|
| T1 | 1022-1029 | Glycan | denotes | Lewis x | https://api.glycosmos.org/wurcs2image/latest/png/binary/G00051MO |
| T2 | 1065-1079 | Glycan | denotes | sialyl Lewis x | https://api.glycosmos.org/wurcs2image/latest/png/binary/G00054MO |
| T3 | 1081-1085 | Glycan | denotes | sLex | https://api.glycosmos.org/wurcs2image/latest/png/binary/G00054MO |
| T4 | 1298-1302 | Glycan | denotes | sLex | https://api.glycosmos.org/wurcs2image/latest/png/binary/G00054MO |
| T5 | 1416-1420 | Glycan | denotes | sLex | https://api.glycosmos.org/wurcs2image/latest/png/binary/G00054MO |
| T6 | 1497-1501 | Glycan | denotes | sLex | https://api.glycosmos.org/wurcs2image/latest/png/binary/G00054MO |
GlyCosmos-GlycoEpitope
| Id | Subject | Object | Predicate | Lexical cue | glycoepitope_id |
|---|---|---|---|---|---|
| T1 | 1022-1029 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | Lewis x | http://www.glycoepitope.jp/epitopes/EP0011 |
| T2 | 1065-1079 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | sialyl Lewis x | http://www.glycoepitope.jp/epitopes/EP0012 |
| T3 | 1081-1085 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | sLex | http://www.glycoepitope.jp/epitopes/EP0012 |
| T4 | 1298-1302 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | sLex | http://www.glycoepitope.jp/epitopes/EP0012 |
| T5 | 1416-1420 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | sLex | http://www.glycoepitope.jp/epitopes/EP0012 |
| T6 | 1497-1501 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | sLex | http://www.glycoepitope.jp/epitopes/EP0012 |
GlyCosmos15-CL
| Id | Subject | Object | Predicate | Lexical cue | cl_id |
|---|---|---|---|---|---|
| T1 | 30-55 | Cell | denotes | mesenchymal stromal cells | http://purl.obolibrary.org/obo/CL:0000134 |
| T2 | 273-298 | Cell | denotes | mesenchymal stromal cells | http://purl.obolibrary.org/obo/CL:0000134 |
| T3 | 300-304 | Cell | denotes | MSCs | http://purl.obolibrary.org/obo/CL:0000134 |
| T4 | 767-771 | Cell | denotes | MSCs | http://purl.obolibrary.org/obo/CL:0000134 |
| T5 | 1336-1340 | Cell | denotes | MSCs | http://purl.obolibrary.org/obo/CL:0000134 |
| T6 | 1527-1531 | Cell | denotes | MSCs | http://purl.obolibrary.org/obo/CL:0000134 |
GlyCosmos15-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T1 | 30-55 | Body_part | denotes | mesenchymal stromal cells | http://purl.obolibrary.org/obo/CL_0000134 |
| T2 | 273-298 | Body_part | denotes | mesenchymal stromal cells | http://purl.obolibrary.org/obo/CL_0000134 |
| T3 | 300-304 | Body_part | denotes | MSCs | http://purl.obolibrary.org/obo/CL_0000134 |
| T4 | 738-758 | Body_part | denotes | umbilical cord blood | http://purl.obolibrary.org/obo/UBERON_0012168 |
| T5 | 767-771 | Body_part | denotes | MSCs | http://purl.obolibrary.org/obo/CL_0000134 |
| T6 | 1033-1038 | Body_part | denotes | blood | http://purl.obolibrary.org/obo/UBERON_0000178 |
| T7 | 1336-1340 | Body_part | denotes | MSCs | http://purl.obolibrary.org/obo/CL_0000134 |
| T8 | 1527-1531 | Body_part | denotes | MSCs | http://purl.obolibrary.org/obo/CL_0000134 |
| T9 | 1535-1546 | Body_part | denotes | bone marrow | http://purl.obolibrary.org/obo/UBERON_0002371 |
GlyCosmos15-Sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-84 | Sentence | denotes | Metabolic glycoengineering of mesenchymal stromal cells with N-propanoylmannosamine. |
| T2 | 85-214 | Sentence | denotes | There is an increasing interest in the modification of cell surface glycosylation to improve the properties of therapeutic cells. |
| T3 | 215-306 | Sentence | denotes | For example, glycosylation affects the biodistribution of mesenchymal stromal cells (MSCs). |
| T4 | 307-381 | Sentence | denotes | Metabolic glycoengineering is an efficient way to modify the cell surface. |
| T5 | 382-555 | Sentence | denotes | The mammalian biosynthetic machinery tolerates the unnatural sialic acid precursor, N-propanoylmannosamine (ManNProp), and incorporates it into cell surface glycoconjugates. |
| T6 | 556-799 | Sentence | denotes | We show here by mass spectrometric analysis of cell surface N-glycans that about half of N-acetylneuraminic acid was replaced by N-propanoylneuraminic acid in the N-glycans of human umbilical cord blood-derived MSCs supplemented with ManNProp. |
| T7 | 800-846 | Sentence | denotes | In addition, the N-glycan profile was altered. |
| T8 | 847-941 | Sentence | denotes | ManNProp-supplemented cells had more multiply fucosylated N-glycan species than control cells. |
| T9 | 942-1087 | Sentence | denotes | The fucosylated epitopes were shown in tandem mass spectrometric analysis to be Lewis x or blood group H epitopes, but not sialyl Lewis x (sLex). |
| T10 | 1088-1212 | Sentence | denotes | The amounts of tri- and tetra-antennary and polylactosamine-containing N-glycans also increased in ManNProp supplementation. |
| T11 | 1213-1376 | Sentence | denotes | In accordance with previous studies of other cell types, increased expression of the sLex epitope in ManNProp-supplemented MSCs was demonstrated by flow cytometry. |
| T12 | 1377-1599 | Sentence | denotes | In light of the N-glycan analysis, the sLex epitope in these cells is likely to be carried by O-glycans or glycolipids. sLex has been shown to target MSCs to bone marrow, which may be desirable in therapeutic applications. |
| T13 | 1600-1843 | Sentence | denotes | The present results represent the first structural analysis of an N-glycome of ManNProp-supplemented cells and demonstrate the feasibility of modifying cell surface glycosylation of therapeutic cells by this type of metabolic glycoengineering. |
GlyCosmos15-GlycoEpitope
| Id | Subject | Object | Predicate | Lexical cue | glycoepitope_id |
|---|---|---|---|---|---|
| T1 | 1022-1029 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | Lewis x | http://www.glycoepitope.jp/epitopes/EP0011 |
| T2 | 1065-1079 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | sialyl Lewis x | http://www.glycoepitope.jp/epitopes/EP0012 |
| T3 | 1081-1085 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | sLex | http://www.glycoepitope.jp/epitopes/EP0012 |
| T4 | 1298-1302 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | sLex | http://www.glycoepitope.jp/epitopes/EP0012 |
| T5 | 1416-1420 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | sLex | http://www.glycoepitope.jp/epitopes/EP0012 |
| T6 | 1497-1501 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | sLex | http://www.glycoepitope.jp/epitopes/EP0012 |
GlyCosmos15-NCBITAXON
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T1 | 386-395 | OrganismTaxon | denotes | mammalian | 40674 |
| T2 | 732-737 | OrganismTaxon | denotes | human | 9606 |
GlyCosmos15-FMA
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T1 | 140-152 | Body_part | denotes | cell surface | FMA:67653 |
| T2 | 368-380 | Body_part | denotes | cell surface | FMA:67653 |
| T3 | 526-538 | Body_part | denotes | cell surface | FMA:67653 |
| T4 | 603-615 | Body_part | denotes | cell surface | FMA:67653 |
| T5 | 738-752 | Body_part | denotes | umbilical cord | FMA:85541 |
| T6 | 753-758 | Body_part | denotes | blood | FMA:9670 |
| T7 | 1033-1038 | Body_part | denotes | blood | FMA:9670 |
| T8 | 1535-1546 | Body_part | denotes | bone marrow | FMA:9608 |
| T9 | 1752-1764 | Body_part | denotes | cell surface | FMA:67653 |
GlyCosmos15-MAT
| Id | Subject | Object | Predicate | Lexical cue | mat_id |
|---|---|---|---|---|---|
| T1 | 738-752 | Body_part | denotes | umbilical cord | http://purl.obolibrary.org/obo/MAT_0000280 |
| T2 | 753-758 | Body_part | denotes | blood | http://purl.obolibrary.org/obo/MAT_0000315 |
| T3 | 1033-1038 | Body_part | denotes | blood | http://purl.obolibrary.org/obo/MAT_0000315 |
| T4 | 1535-1546 | Body_part | denotes | bone marrow | http://purl.obolibrary.org/obo/MAT_0000084 |
NCBITAXON
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T1 | 732-737 | OrganismTaxon | denotes | human | 9606 |
Anatomy-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T1 | 30-55 | Body_part | denotes | mesenchymal stromal cells | http://purl.obolibrary.org/obo/CL_0000134 |
| T2 | 273-298 | Body_part | denotes | mesenchymal stromal cells | http://purl.obolibrary.org/obo/CL_0000134 |
| T3 | 300-304 | Body_part | denotes | MSCs | http://purl.obolibrary.org/obo/CL_0000134 |
| T4 | 738-758 | Body_part | denotes | umbilical cord blood | http://purl.obolibrary.org/obo/UBERON_0012168 |
| T5 | 767-771 | Body_part | denotes | MSCs | http://purl.obolibrary.org/obo/CL_0000134 |
| T6 | 1033-1038 | Body_part | denotes | blood | http://purl.obolibrary.org/obo/UBERON_0000178 |
| T7 | 1336-1340 | Body_part | denotes | MSCs | http://purl.obolibrary.org/obo/CL_0000134 |
| T8 | 1527-1531 | Body_part | denotes | MSCs | http://purl.obolibrary.org/obo/CL_0000134 |
| T9 | 1535-1546 | Body_part | denotes | bone marrow | http://purl.obolibrary.org/obo/UBERON_0002371 |
Anatomy-MAT
| Id | Subject | Object | Predicate | Lexical cue | mat_id |
|---|---|---|---|---|---|
| T1 | 738-752 | Body_part | denotes | umbilical cord | http://purl.obolibrary.org/obo/MAT_0000280 |
| T2 | 753-758 | Body_part | denotes | blood | http://purl.obolibrary.org/obo/MAT_0000083|http://purl.obolibrary.org/obo/MAT_0000315 |
| T4 | 1033-1038 | Body_part | denotes | blood | http://purl.obolibrary.org/obo/MAT_0000083|http://purl.obolibrary.org/obo/MAT_0000315 |
| T6 | 1535-1546 | Body_part | denotes | bone marrow | http://purl.obolibrary.org/obo/MAT_0000084 |