PubMed:23631431 JSONTXT

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{"target":"https://pubannotation.org/docs/sourcedb/PubMed/sourceid/23631431","sourcedb":"PubMed","sourceid":"23631431","source_url":"http://www.ncbi.nlm.nih.gov/pubmed/23631431","text":"Association between the LCE3C_LCE3B deletion polymorphism and susceptibility to psoriasis: a meta-analysis of published studies.\nOBJECTIVE: To determine whether a deletion comprising the LCE3C and LCE3B genes (LCE3C_LCE3B-del) confers susceptibility to psoriasis.\nMETHODS: A meta-analysis was conducted to assess the association between the LCE3C_LCE3B-del polymorphism and psoriasis.\nRESULTS: A total of 12,196 patients with psoriasis and 13,092 controls from 19 comparative studies were included in this meta-analysis. The meta-analysis showed a significant association between psoriasis and the LCE3C_LCE3B-del allele (odds ratio [OR], 1.220; 95% confidence interval [CI], 1.152-1.292; p\u003c1.0×10(-9)). Stratification by ethnicity indicated an association between the LCE3C_LCE3B-del allele and psoriasis in Europeans and Asians (OR, 1.213; 95% CI, 1.130-1.302; p=8.0×10(-9) and OR, 1.260; 95% CI, 1.135-1.398; p=1.4×10(-6), respectively). Analysis using a recessive model, dominant model, and homozygote contrast showed the same pattern for the LCE3C_LCE3B-del allele. The analysis performed in a single Tunisian study showed no association between the LCE3C_LCE3B-del allele and psoriasis. Meta-analysis of the LCE3C_LCE3B-del allele showed no association between psoriatic arthritis and the LCE3C_LCE3B-del polymorphism (OR, 1.087; 95% CI, 0.870-1.359; p=0.464).\nCONCLUSION: Our meta-analysis demonstrates a significant association between psoriasis and the LCE3C_LCE3B-del polymorphism in Europeans and Asians, but no association with psoriatic arthritis.","tracks":[{"project":"DisGeNET5_gene_disease","denotations":[{"id":"23631431-0#24#29#gene353144","span":{"begin":24,"end":29},"obj":"gene353144"},{"id":"23631431-0#30#35#gene353143","span":{"begin":30,"end":35},"obj":"gene353143"},{"id":"23631431-0#80#89#diseaseC0033860","span":{"begin":80,"end":89},"obj":"diseaseC0033860"}],"relations":[{"id":"24#29#gene35314480#89#diseaseC0033860","pred":"associated_with","subj":"23631431-0#24#29#gene353144","obj":"23631431-0#80#89#diseaseC0033860"},{"id":"30#35#gene35314380#89#diseaseC0033860","pred":"associated_with","subj":"23631431-0#30#35#gene353143","obj":"23631431-0#80#89#diseaseC0033860"}],"attributes":[{"subj":"23631431-0#24#29#gene353144","pred":"source","obj":"DisGeNET5_gene_disease"},{"subj":"23631431-0#30#35#gene353143","pred":"source","obj":"DisGeNET5_gene_disease"},{"subj":"23631431-0#80#89#diseaseC0033860","pred":"source","obj":"DisGeNET5_gene_disease"}]},{"project":"DisGeNET","denotations":[{"id":"T0","span":{"begin":30,"end":35},"obj":"gene:353143"},{"id":"T1","span":{"begin":80,"end":89},"obj":"disease:C0033860"},{"id":"T2","span":{"begin":24,"end":29},"obj":"gene:353144"},{"id":"T3","span":{"begin":80,"end":89},"obj":"disease:C0033860"},{"id":"T4","span":{"begin":347,"end":352},"obj":"gene:353143"},{"id":"T5","span":{"begin":374,"end":383},"obj":"disease:C0033860"},{"id":"T6","span":{"begin":341,"end":346},"obj":"gene:353144"},{"id":"T7","span":{"begin":374,"end":383},"obj":"disease:C0033860"},{"id":"T8","span":{"begin":604,"end":609},"obj":"gene:353143"},{"id":"T9","span":{"begin":580,"end":589},"obj":"disease:C0033860"},{"id":"T10","span":{"begin":598,"end":603},"obj":"gene:353144"},{"id":"T11","span":{"begin":580,"end":589},"obj":"disease:C0033860"},{"id":"T12","span":{"begin":769,"end":774},"obj":"gene:353144"},{"id":"T13","span":{"begin":796,"end":805},"obj":"disease:C0033860"},{"id":"T14","span":{"begin":775,"end":780},"obj":"gene:353143"},{"id":"T15","span":{"begin":796,"end":805},"obj":"disease:C0033860"},{"id":"T16","span":{"begin":1161,"end":1166},"obj":"gene:353143"},{"id":"T17","span":{"begin":1182,"end":1191},"obj":"disease:C0033860"},{"id":"T18","span":{"begin":1155,"end":1160},"obj":"gene:353144"},{"id":"T19","span":{"begin":1182,"end":1191},"obj":"disease:C0033860"}],"relations":[{"id":"R1","pred":"associated_with","subj":"T0","obj":"T1"},{"id":"R2","pred":"associated_with","subj":"T2","obj":"T3"},{"id":"R3","pred":"associated_with","subj":"T4","obj":"T5"},{"id":"R4","pred":"associated_with","subj":"T6","obj":"T7"},{"id":"R5","pred":"associated_with","subj":"T8","obj":"T9"},{"id":"R6","pred":"associated_with","subj":"T10","obj":"T11"},{"id":"R7","pred":"associated_with","subj":"T12","obj":"T13"},{"id":"R8","pred":"associated_with","subj":"T14","obj":"T15"},{"id":"R9","pred":"associated_with","subj":"T16","obj":"T17"},{"id":"R10","pred":"associated_with","subj":"T18","obj":"T19"}],"namespaces":[{"prefix":"gene","uri":"http://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"disease","uri":"http://purl.bioontology.org/ontology/MEDLINEPLUS/"}],"attributes":[{"subj":"T0","pred":"source","obj":"DisGeNET"},{"subj":"T1","pred":"source","obj":"DisGeNET"},{"subj":"T2","pred":"source","obj":"DisGeNET"},{"subj":"T3","pred":"source","obj":"DisGeNET"},{"subj":"T4","pred":"source","obj":"DisGeNET"},{"subj":"T5","pred":"source","obj":"DisGeNET"},{"subj":"T6","pred":"source","obj":"DisGeNET"},{"subj":"T7","pred":"source","obj":"DisGeNET"},{"subj":"T8","pred":"source","obj":"DisGeNET"},{"subj":"T9","pred":"source","obj":"DisGeNET"},{"subj":"T10","pred":"source","obj":"DisGeNET"},{"subj":"T11","pred":"source","obj":"DisGeNET"},{"subj":"T12","pred":"source","obj":"DisGeNET"},{"subj":"T13","pred":"source","obj":"DisGeNET"},{"subj":"T14","pred":"source","obj":"DisGeNET"},{"subj":"T15","pred":"source","obj":"DisGeNET"},{"subj":"T16","pred":"source","obj":"DisGeNET"},{"subj":"T17","pred":"source","obj":"DisGeNET"},{"subj":"T18","pred":"source","obj":"DisGeNET"},{"subj":"T19","pred":"source","obj":"DisGeNET"}]},{"project":"Allie","denotations":[{"id":"SS1_23631431_7_0","span":{"begin":622,"end":632},"obj":"expanded"},{"id":"SS2_23631431_7_0","span":{"begin":634,"end":636},"obj":"abbr"},{"id":"SS1_23631431_7_1","span":{"begin":650,"end":669},"obj":"expanded"},{"id":"SS2_23631431_7_1","span":{"begin":671,"end":673},"obj":"abbr"}],"relations":[{"id":"AE1_23631431_7_0","pred":"abbreviatedTo","subj":"SS1_23631431_7_0","obj":"SS2_23631431_7_0"},{"id":"AE1_23631431_7_1","pred":"abbreviatedTo","subj":"SS1_23631431_7_1","obj":"SS2_23631431_7_1"}],"attributes":[{"subj":"SS1_23631431_7_0","pred":"source","obj":"Allie"},{"subj":"SS2_23631431_7_0","pred":"source","obj":"Allie"},{"subj":"SS1_23631431_7_1","pred":"source","obj":"Allie"},{"subj":"SS2_23631431_7_1","pred":"source","obj":"Allie"}]},{"project":"PubmedHPO","denotations":[{"id":"T1","span":{"begin":253,"end":262},"obj":"HP_0003765"}],"attributes":[{"subj":"T1","pred":"source","obj":"PubmedHPO"}]}],"config":{"att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