PubMed:23485991 JSON TXT

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pqqtest_sentence

21k_plant_trait_mention

OryzaGP_2021

OryzaGP_2021_v2

{"project":"OryzaGP_2021_v2","denotations":[{"id":"T1","span":{"begin":26,"end":36},"obj":"http://identifiers.org/oryzabase.gene/10030"},{"id":"T2","span":{"begin":352,"end":362},"obj":"http://identifiers.org/oryzabase.gene/10030"},{"id":"T3","span":{"begin":608,"end":618},"obj":"http://identifiers.org/oryzabase.gene/10030"},{"id":"T4","span":{"begin":824,"end":834},"obj":"http://identifiers.org/oryzabase.gene/10030"},{"id":"T5","span":{"begin":889,"end":899},"obj":"http://identifiers.org/oryzabase.gene/10030"},{"id":"T6","span":{"begin":1013,"end":1023},"obj":"http://identifiers.org/oryzabase.gene/10030"},{"id":"T82758","span":{"begin":26,"end":36},"obj":"http://identifiers.org/rapdb.locus/Os08g0541400"},{"id":"T81734","span":{"begin":352,"end":362},"obj":"http://identifiers.org/rapdb.locus/Os08g0541400"},{"id":"T61848","span":{"begin":608,"end":618},"obj":"http://identifiers.org/rapdb.locus/Os08g0541400"},{"id":"T71860","span":{"begin":824,"end":834},"obj":"http://identifiers.org/rapdb.locus/Os08g0541400"},{"id":"T96192","span":{"begin":889,"end":899},"obj":"http://identifiers.org/rapdb.locus/Os08g0541400"},{"id":"T45528","span":{"begin":1013,"end":1023},"obj":"http://identifiers.org/rapdb.locus/Os08g0541400"}],"text":"A Rice Immunophilin Gene, OsFKBP16-3, Confers Tolerance to Environmental Stress in Arabidopsis and Rice.\nThe putative thylakoid lumen immunophilin, FKBP16-3, has not yet been characterized, although this protein is known to be regulated by thioredoxin and possesses a well-conserved CxxxC motif in photosynthetic organisms. Here, we characterized rice OsFKBP16-3 and examined the role of this gene in the regulation of abiotic stress in plants. FKBP16-3s are well conserved in eukaryotic photosynthetic organisms, including the presence of a unique disulfide-forming CxxxC motif in their N-terminal regions. OsFKBP16-3 was mainly expressed in rice leaf tissues and was upregulated by various abiotic stresses, including salt, drought, high light, hydrogen peroxide, heat and methyl viologen. The chloroplast localization of OsFKBP16-3-GFP was confirmed through the transient expression of OsFKBP16-3 in Nicotiana benthamiana leaves. Transgenic Arabidopsis and transgenic rice plants that constitutively expressed OsFKBP16-3 exhibited increased tolerance to salinity, drought and oxidative stresses, but showed no change in growth or phenotype, compared with vector control plants, when grown under non-stressed conditions. This is the first report to demonstrate the potential role of FKBP16-3 in the environmental stress response, which may be regulated by a redox relay process in the thylakoid lumen, suggesting that artificial regulation of FKBP16-3 expression is a candidate for stress-tolerant crop breeding."}

OryzaGP_2021_FLAIR

{"project":"OryzaGP_2021_FLAIR","denotations":[{"id":"M_0","span":{"begin":549,"end":558},"obj":"hunflair:NA:Chemical"},{"id":"M_1","span":{"begin":26,"end":34},"obj":"hunflair:NA:Gene"},{"id":"M_2","span":{"begin":352,"end":360},"obj":"hunflair:NA:Gene"},{"id":"M_3","span":{"begin":608,"end":616},"obj":"hunflair:NA:Gene"},{"id":"M_4","span":{"begin":824,"end":832},"obj":"hunflair:NA:Gene"},{"id":"M_5","span":{"begin":889,"end":897},"obj":"hunflair:NA:Gene"},{"id":"M_6","span":{"begin":1013,"end":1021},"obj":"hunflair:NA:Gene"},{"id":"M_7","span":{"begin":240,"end":251},"obj":"hunflair:NA:Gene"},{"id":"M_8","span":{"begin":775,"end":790},"obj":"hunflair:NA:Chemical"},{"id":"M_9","span":{"begin":2,"end":6},"obj":"hunflair:NA:Species"},{"id":"M_10","span":{"begin":99,"end":103},"obj":"hunflair:NA:Species"},{"id":"M_11","span":{"begin":747,"end":764},"obj":"hunflair:NA:Chemical"},{"id":"M_12","span":{"begin":796,"end":807},"obj":"hunflair:NA:Gene"},{"id":"M_13","span":{"begin":2,"end":24},"obj":"hunflair:NA:Gene"},{"id":"M_14","span":{"begin":134,"end":146},"obj":"hunflair:NA:Gene"},{"id":"M_15","span":{"begin":903,"end":924},"obj":"hunflair:NA:Species"},{"id":"M_16","span":{"begin":347,"end":351},"obj":"hunflair:NA:Species"},{"id":"M_17","span":{"begin":643,"end":647},"obj":"hunflair:NA:Species"},{"id":"M_18","span":{"begin":971,"end":975},"obj":"hunflair:NA:Species"},{"id":"M_19","span":{"begin":445,"end":454},"obj":"hunflair:NA:Gene"},{"id":"M_20","span":{"begin":148,"end":156},"obj":"hunflair:NA:Gene"},{"id":"M_21","span":{"begin":1285,"end":1293},"obj":"hunflair:NA:Gene"},{"id":"M_22","span":{"begin":1445,"end":1453},"obj":"hunflair:NA:Gene"},{"id":"M_23","span":{"begin":26,"end":36},"obj":"hunflair:NA:Gene"},{"id":"M_24","span":{"begin":352,"end":362},"obj":"hunflair:NA:Gene"},{"id":"M_25","span":{"begin":608,"end":618},"obj":"hunflair:NA:Gene"},{"id":"M_26","span":{"begin":824,"end":834},"obj":"hunflair:NA:Gene"},{"id":"M_27","span":{"begin":889,"end":899},"obj":"hunflair:NA:Gene"},{"id":"M_28","span":{"begin":1013,"end":1023},"obj":"hunflair:NA:Gene"},{"id":"M_29","span":{"begin":83,"end":94},"obj":"hunflair:NA:Species"},{"id":"M_30","span":{"begin":944,"end":955},"obj":"hunflair:NA:Species"}],"text":"A Rice Immunophilin Gene, OsFKBP16-3, Confers Tolerance to Environmental Stress in Arabidopsis and Rice.\nThe putative thylakoid lumen immunophilin, FKBP16-3, has not yet been characterized, although this protein is known to be regulated by thioredoxin and possesses a well-conserved CxxxC motif in photosynthetic organisms. Here, we characterized rice OsFKBP16-3 and examined the role of this gene in the regulation of abiotic stress in plants. FKBP16-3s are well conserved in eukaryotic photosynthetic organisms, including the presence of a unique disulfide-forming CxxxC motif in their N-terminal regions. OsFKBP16-3 was mainly expressed in rice leaf tissues and was upregulated by various abiotic stresses, including salt, drought, high light, hydrogen peroxide, heat and methyl viologen. The chloroplast localization of OsFKBP16-3-GFP was confirmed through the transient expression of OsFKBP16-3 in Nicotiana benthamiana leaves. Transgenic Arabidopsis and transgenic rice plants that constitutively expressed OsFKBP16-3 exhibited increased tolerance to salinity, drought and oxidative stresses, but showed no change in growth or phenotype, compared with vector control plants, when grown under non-stressed conditions. This is the first report to demonstrate the potential role of FKBP16-3 in the environmental stress response, which may be regulated by a redox relay process in the thylakoid lumen, suggesting that artificial regulation of FKBP16-3 expression is a candidate for stress-tolerant crop breeding."}

OryzaGP

{"project":"OryzaGP","denotations":[{"id":"T1","span":{"begin":26,"end":34},"obj":"gene"},{"id":"T2","span":{"begin":352,"end":360},"obj":"gene"},{"id":"T3","span":{"begin":608,"end":616},"obj":"gene"},{"id":"T4","span":{"begin":796,"end":807},"obj":"gene"},{"id":"T5","span":{"begin":824,"end":832},"obj":"gene"},{"id":"T6","span":{"begin":889,"end":897},"obj":"gene"},{"id":"T7","span":{"begin":1013,"end":1021},"obj":"gene"}],"text":"A Rice Immunophilin Gene, OsFKBP16-3, Confers Tolerance to Environmental Stress in Arabidopsis and Rice.\nThe putative thylakoid lumen immunophilin, FKBP16-3, has not yet been characterized, although this protein is known to be regulated by thioredoxin and possesses a well-conserved CxxxC motif in photosynthetic organisms. Here, we characterized rice OsFKBP16-3 and examined the role of this gene in the regulation of abiotic stress in plants. FKBP16-3s are well conserved in eukaryotic photosynthetic organisms, including the presence of a unique disulfide-forming CxxxC motif in their N-terminal regions. OsFKBP16-3 was mainly expressed in rice leaf tissues and was upregulated by various abiotic stresses, including salt, drought, high light, hydrogen peroxide, heat and methyl viologen. The chloroplast localization of OsFKBP16-3-GFP was confirmed through the transient expression of OsFKBP16-3 in Nicotiana benthamiana leaves. Transgenic Arabidopsis and transgenic rice plants that constitutively expressed OsFKBP16-3 exhibited increased tolerance to salinity, drought and oxidative stresses, but showed no change in growth or phenotype, compared with vector control plants, when grown under non-stressed conditions. This is the first report to demonstrate the potential role of FKBP16-3 in the environmental stress response, which may be regulated by a redox relay process in the thylakoid lumen, suggesting that artificial regulation of FKBP16-3 expression is a candidate for stress-tolerant crop breeding."}

CHEMDNER-training-test

{"project":"CHEMDNER-training-test","denotations":[{"id":"T1","span":{"begin":549,"end":558},"obj":"SYSTEMATIC"},{"id":"T2","span":{"begin":588,"end":589},"obj":"FORMULA"},{"id":"T3","span":{"begin":747,"end":764},"obj":"SYSTEMATIC"},{"id":"T4","span":{"begin":775,"end":790},"obj":"SYSTEMATIC"}],"text":"A Rice Immunophilin Gene, OsFKBP16-3, Confers Tolerance to Environmental Stress in Arabidopsis and Rice.\nThe putative thylakoid lumen immunophilin, FKBP16-3, has not yet been characterized, although this protein is known to be regulated by thioredoxin and possesses a well-conserved CxxxC motif in photosynthetic organisms. Here, we characterized rice OsFKBP16-3 and examined the role of this gene in the regulation of abiotic stress in plants. FKBP16-3s are well conserved in eukaryotic photosynthetic organisms, including the presence of a unique disulfide-forming CxxxC motif in their N-terminal regions. OsFKBP16-3 was mainly expressed in rice leaf tissues and was upregulated by various abiotic stresses, including salt, drought, high light, hydrogen peroxide, heat and methyl viologen. The chloroplast localization of OsFKBP16-3-GFP was confirmed through the transient expression of OsFKBP16-3 in Nicotiana benthamiana leaves. Transgenic Arabidopsis and transgenic rice plants that constitutively expressed OsFKBP16-3 exhibited increased tolerance to salinity, drought and oxidative stresses, but showed no change in growth or phenotype, compared with vector control plants, when grown under non-stressed conditions. This is the first report to demonstrate the potential role of FKBP16-3 in the environmental stress response, which may be regulated by a redox relay process in the thylakoid lumen, suggesting that artificial regulation of FKBP16-3 expression is a candidate for stress-tolerant crop breeding."}

PMID_GLOBAL

{"project":"PMID_GLOBAL","denotations":[{"id":"T1","span":{"begin":1500,"end":1504},"obj":"Body_part"}],"attributes":[{"id":"A1","pred":"uberon_id","subj":"T1","obj":"http://purl.obolibrary.org/obo/UBERON_0007356"}],"text":"A Rice Immunophilin Gene, OsFKBP16-3, Confers Tolerance to Environmental Stress in Arabidopsis and Rice.\nThe putative thylakoid lumen immunophilin, FKBP16-3, has not yet been characterized, although this protein is known to be regulated by thioredoxin and possesses a well-conserved CxxxC motif in photosynthetic organisms. Here, we characterized rice OsFKBP16-3 and examined the role of this gene in the regulation of abiotic stress in plants. FKBP16-3s are well conserved in eukaryotic photosynthetic organisms, including the presence of a unique disulfide-forming CxxxC motif in their N-terminal regions. OsFKBP16-3 was mainly expressed in rice leaf tissues and was upregulated by various abiotic stresses, including salt, drought, high light, hydrogen peroxide, heat and methyl viologen. The chloroplast localization of OsFKBP16-3-GFP was confirmed through the transient expression of OsFKBP16-3 in Nicotiana benthamiana leaves. Transgenic Arabidopsis and transgenic rice plants that constitutively expressed OsFKBP16-3 exhibited increased tolerance to salinity, drought and oxidative stresses, but showed no change in growth or phenotype, compared with vector control plants, when grown under non-stressed conditions. This is the first report to demonstrate the potential role of FKBP16-3 in the environmental stress response, which may be regulated by a redox relay process in the thylakoid lumen, suggesting that artificial regulation of FKBP16-3 expression is a candidate for stress-tolerant crop breeding."}

Oryza_sentences

{"project":"Oryza_sentences","blocks":[{"id":"T1","span":{"begin":0,"end":104},"obj":"Sentence"},{"id":"T2","span":{"begin":105,"end":323},"obj":"Sentence"},{"id":"T3","span":{"begin":324,"end":444},"obj":"Sentence"},{"id":"T4","span":{"begin":445,"end":607},"obj":"Sentence"},{"id":"T5","span":{"begin":608,"end":791},"obj":"Sentence"},{"id":"T6","span":{"begin":792,"end":932},"obj":"Sentence"},{"id":"T7","span":{"begin":933,"end":1222},"obj":"Sentence"},{"id":"T8","span":{"begin":1223,"end":1514},"obj":"Sentence"}],"text":"A Rice Immunophilin Gene, OsFKBP16-3, Confers Tolerance to Environmental Stress in Arabidopsis and Rice.\nThe putative thylakoid lumen immunophilin, FKBP16-3, has not yet been characterized, although this protein is known to be regulated by thioredoxin and possesses a well-conserved CxxxC motif in photosynthetic organisms. Here, we characterized rice OsFKBP16-3 and examined the role of this gene in the regulation of abiotic stress in plants. FKBP16-3s are well conserved in eukaryotic photosynthetic organisms, including the presence of a unique disulfide-forming CxxxC motif in their N-terminal regions. OsFKBP16-3 was mainly expressed in rice leaf tissues and was upregulated by various abiotic stresses, including salt, drought, high light, hydrogen peroxide, heat and methyl viologen. The chloroplast localization of OsFKBP16-3-GFP was confirmed through the transient expression of OsFKBP16-3 in Nicotiana benthamiana leaves. Transgenic Arabidopsis and transgenic rice plants that constitutively expressed OsFKBP16-3 exhibited increased tolerance to salinity, drought and oxidative stresses, but showed no change in growth or phenotype, compared with vector control plants, when grown under non-stressed conditions. This is the first report to demonstrate the potential role of FKBP16-3 in the environmental stress response, which may be regulated by a redox relay process in the thylakoid lumen, suggesting that artificial regulation of FKBP16-3 expression is a candidate for stress-tolerant crop breeding."}