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PubMed:2346948 JSONTXT

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GlyCosmos6-Glycan-Motif-Image

Id Subject Object Predicate Lexical cue image
T1 55-66 Glycan_Motif denotes chondroitin https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G43702JT
T2 184-195 Glycan_Motif denotes chondroitin https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G43702JT

GlyCosmos6-Glycan-Motif-Structure

Id Subject Object Predicate Lexical cue
T1 55-66 https://glytoucan.org/Structures/Glycans/G43702JT denotes chondroitin
T2 184-195 https://glytoucan.org/Structures/Glycans/G43702JT denotes chondroitin

Glycosmos6-GlycoEpitope

Id Subject Object Predicate Lexical cue
T1 55-66 http://www.glycoepitope.jp/epitopes/EP0081 denotes chondroitin
T2 184-195 http://www.glycoepitope.jp/epitopes/EP0081 denotes chondroitin

PubmedHPO

Id Subject Object Predicate Lexical cue
T1 277-281 HP_0100699 denotes scar
T2 311-315 HP_0000365 denotes DEAE

sentences

Id Subject Object Predicate Lexical cue
TextSentencer_T1 0-145 Sentence denotes Isolation and some structure analyses of a copolymeric chondroitin sulfate-dermatan sulfate proteoglycan from post-burn, human hypertrophic scar.
TextSentencer_T2 146-430 Sentence denotes A D-glucuronic acid rich, copolymeric chondroitin sulfate (CS)-dermatan sulfate (DS) proteoglycan (PG) from post-burn hypertrophic scar tissue (HSc) was obtained by DEAE-cellulose chromatography and differential ethanol fractionation, and further purified on a Sepharose CL-6B column.
TextSentencer_T3 431-470 Sentence denotes CS-DS-PG protein content was 14% (w/w).
TextSentencer_T4 471-594 Sentence denotes The amino-terminal amino acid sequence of the first ten residues was as follows: NH2-Asp-Glu-Ala-B-Gly-Ile-Gly-Pro-Glu-Val.
TextSentencer_T5 595-714 Sentence denotes This sequence is identical to that of human embryonic fibroblast cell (IMR-90) CS-DS-PG, as well as to human HSc-DS-PG.
TextSentencer_T6 715-883 Sentence denotes After chondroitinase ABC treatment, two peptides (Mr 22,000 and 16,000 daltons) were detected by sodium dodecyl sulfate-(polyacryl)amide gel electrophoresis (SDS-PAGE).
TextSentencer_T7 884-1105 Sentence denotes ELISA analysis using rabbit antiserum raised against a synthetic peptide that contained 15 amino acids in the same sequence as the amino terminus of human fetal membrane PG showed significant reactivity with HSc CS-DS-PG.
TextSentencer_T8 1106-1232 Sentence denotes HSc CS-DS-PG had an apparent Mr of approximately 78,000 daltons, as determined by Sepharose CL-6B chromatography and SDS-PAGE.
TextSentencer_T9 1233-1354 Sentence denotes Alkaline borohydride treatment of CS-DS-PG liberated CS-DS glycosaminoglycan (GAG) chains having an Mr of 29,000 daltons.
TextSentencer_T10 1355-1496 Sentence denotes The conversion of xylose to xylitol indicated that the GAG chains are attached to the PG protein core at O-3 through a xylosyl-seryl linkage.
TextSentencer_T11 1497-1601 Sentence denotes CS-DS-PG also contained both N and O-linked oligosaccharides and did not aggregate with hyaluronic acid.
TextSentencer_T12 1602-1784 Sentence denotes These results, together with those reported previously, showed that HSc CS-DS-PG and DS-PG have the same A1-A15 amino acid sequence at the amino terminus but different protein cores.
TextSentencer_T13 1785-1900 Sentence denotes HSc CS-DS-PG was completely digested with chondroitinase AC and is, therefore, distinctly different from HSc DS-PG.
T1 0-145 Sentence denotes Isolation and some structure analyses of a copolymeric chondroitin sulfate-dermatan sulfate proteoglycan from post-burn, human hypertrophic scar.
T2 146-430 Sentence denotes A D-glucuronic acid rich, copolymeric chondroitin sulfate (CS)-dermatan sulfate (DS) proteoglycan (PG) from post-burn hypertrophic scar tissue (HSc) was obtained by DEAE-cellulose chromatography and differential ethanol fractionation, and further purified on a Sepharose CL-6B column.
T3 431-470 Sentence denotes CS-DS-PG protein content was 14% (w/w).
T4 471-594 Sentence denotes The amino-terminal amino acid sequence of the first ten residues was as follows: NH2-Asp-Glu-Ala-B-Gly-Ile-Gly-Pro-Glu-Val.
T5 595-714 Sentence denotes This sequence is identical to that of human embryonic fibroblast cell (IMR-90) CS-DS-PG, as well as to human HSc-DS-PG.
T6 715-883 Sentence denotes After chondroitinase ABC treatment, two peptides (Mr 22,000 and 16,000 daltons) were detected by sodium dodecyl sulfate-(polyacryl)amide gel electrophoresis (SDS-PAGE).
T7 884-1105 Sentence denotes ELISA analysis using rabbit antiserum raised against a synthetic peptide that contained 15 amino acids in the same sequence as the amino terminus of human fetal membrane PG showed significant reactivity with HSc CS-DS-PG.
T8 1106-1232 Sentence denotes HSc CS-DS-PG had an apparent Mr of approximately 78,000 daltons, as determined by Sepharose CL-6B chromatography and SDS-PAGE.
T9 1233-1354 Sentence denotes Alkaline borohydride treatment of CS-DS-PG liberated CS-DS glycosaminoglycan (GAG) chains having an Mr of 29,000 daltons.
T10 1355-1496 Sentence denotes The conversion of xylose to xylitol indicated that the GAG chains are attached to the PG protein core at O-3 through a xylosyl-seryl linkage.
T11 1497-1601 Sentence denotes CS-DS-PG also contained both N and O-linked oligosaccharides and did not aggregate with hyaluronic acid.
T12 1602-1784 Sentence denotes These results, together with those reported previously, showed that HSc CS-DS-PG and DS-PG have the same A1-A15 amino acid sequence at the amino terminus but different protein cores.
T13 1785-1900 Sentence denotes HSc CS-DS-PG was completely digested with chondroitinase AC and is, therefore, distinctly different from HSc DS-PG.

GlyCosmos15-Glycan

Id Subject Object Predicate Lexical cue image
T1 55-66 Glycan denotes chondroitin https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT
T2 184-195 Glycan denotes chondroitin https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT

mondo_disease

Id Subject Object Predicate Lexical cue mondo_id
T1 75-104 Disease denotes dermatan sulfate proteoglycan http://purl.obolibrary.org/obo/MONDO_0007526|http://purl.obolibrary.org/obo/MONDO_0020682
T3 115-119 Disease denotes burn http://purl.obolibrary.org/obo/MONDO_0043519
T4 140-144 Disease denotes scar http://purl.obolibrary.org/obo/MONDO_0005594
T5 259-263 Disease denotes burn http://purl.obolibrary.org/obo/MONDO_0043519
T6 277-281 Disease denotes scar http://purl.obolibrary.org/obo/MONDO_0005594

Glycan-GlyCosmos

Id Subject Object Predicate Lexical cue image
T1 55-66 Glycan denotes chondroitin https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT
T2 184-195 Glycan denotes chondroitin https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT

GlyCosmos-GlycoEpitope

Id Subject Object Predicate Lexical cue glycoepitope_id
T1 55-66 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes chondroitin http://www.glycoepitope.jp/epitopes/EP0081
T2 184-195 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes chondroitin http://www.glycoepitope.jp/epitopes/EP0081

GlyCosmos15-HP

Id Subject Object Predicate Lexical cue hp_id
T1 277-288 Phenotype denotes scar tissue HP:0100699

GlyCosmos15-CL

Id Subject Object Predicate Lexical cue cl_id
T1 639-659 Cell denotes embryonic fibroblast http://purl.obolibrary.org/obo/CL:2000042
T2 649-659 Cell denotes fibroblast http://purl.obolibrary.org/obo/CL:0000057

GlyCosmos15-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 282-288 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479
T2 639-659 Body_part denotes embryonic fibroblast http://purl.obolibrary.org/obo/CL_2000042
T3 1039-1053 Body_part denotes fetal membrane http://purl.obolibrary.org/obo/UBERON_0005630

GlyCosmos15-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T1 75-104 Disease denotes dermatan sulfate proteoglycan MONDO:0007526|MONDO:0020682

GlyCosmos15-Taxon

Id Subject Object Predicate Lexical cue db_id
T1 121-126 Organism denotes human 9606
T2 633-638 Organism denotes human 9606
T3 698-703 Organism denotes human 9606
T4 1033-1038 Organism denotes human 9606

GlyCosmos15-Sentences

Id Subject Object Predicate Lexical cue
T1 0-145 Sentence denotes Isolation and some structure analyses of a copolymeric chondroitin sulfate-dermatan sulfate proteoglycan from post-burn, human hypertrophic scar.
T2 146-430 Sentence denotes A D-glucuronic acid rich, copolymeric chondroitin sulfate (CS)-dermatan sulfate (DS) proteoglycan (PG) from post-burn hypertrophic scar tissue (HSc) was obtained by DEAE-cellulose chromatography and differential ethanol fractionation, and further purified on a Sepharose CL-6B column.
T3 431-470 Sentence denotes CS-DS-PG protein content was 14% (w/w).
T4 471-714 Sentence denotes The amino-terminal amino acid sequence of the first ten residues was as follows: NH2-Asp-Glu-Ala-B-Gly-Ile-Gly-Pro-Glu-Val. This sequence is identical to that of human embryonic fibroblast cell (IMR-90) CS-DS-PG, as well as to human HSc-DS-PG.
T5 715-883 Sentence denotes After chondroitinase ABC treatment, two peptides (Mr 22,000 and 16,000 daltons) were detected by sodium dodecyl sulfate-(polyacryl)amide gel electrophoresis (SDS-PAGE).
T6 884-1105 Sentence denotes ELISA analysis using rabbit antiserum raised against a synthetic peptide that contained 15 amino acids in the same sequence as the amino terminus of human fetal membrane PG showed significant reactivity with HSc CS-DS-PG.
T7 1106-1232 Sentence denotes HSc CS-DS-PG had an apparent Mr of approximately 78,000 daltons, as determined by Sepharose CL-6B chromatography and SDS-PAGE.
T8 1233-1354 Sentence denotes Alkaline borohydride treatment of CS-DS-PG liberated CS-DS glycosaminoglycan (GAG) chains having an Mr of 29,000 daltons.
T9 1355-1496 Sentence denotes The conversion of xylose to xylitol indicated that the GAG chains are attached to the PG protein core at O-3 through a xylosyl-seryl linkage.
T10 1497-1601 Sentence denotes CS-DS-PG also contained both N and O-linked oligosaccharides and did not aggregate with hyaluronic acid.
T11 1602-1784 Sentence denotes These results, together with those reported previously, showed that HSc CS-DS-PG and DS-PG have the same A1-A15 amino acid sequence at the amino terminus but different protein cores.
T12 1785-1900 Sentence denotes HSc CS-DS-PG was completely digested with chondroitinase AC and is, therefore, distinctly different from HSc DS-PG.

GlyCosmos15-GlycoEpitope

Id Subject Object Predicate Lexical cue glycoepitope_id
T1 55-66 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes chondroitin http://www.glycoepitope.jp/epitopes/EP0081
T2 184-195 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes chondroitin http://www.glycoepitope.jp/epitopes/EP0081

GlyCosmos15-FMA

Id Subject Object Predicate Lexical cue db_id
T1 282-288 Body_part denotes tissue FMA:9637
T2 649-659 Body_part denotes fibroblast FMA:63877

NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T1 121-126 OrganismTaxon denotes human 9606
T2 633-638 OrganismTaxon denotes human 9606
T3 698-703 OrganismTaxon denotes human 9606
T4 1033-1038 OrganismTaxon denotes human 9606

Anatomy-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 282-288 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479
T2 639-659 Body_part denotes embryonic fibroblast http://purl.obolibrary.org/obo/CL_2000042
T3 1039-1053 Body_part denotes fetal membrane http://purl.obolibrary.org/obo/UBERON_0005630

HP-phenotype

Id Subject Object Predicate Lexical cue hp_id
T1 277-288 Phenotype denotes scar tissue HP:0100699

CL-cell

Id Subject Object Predicate Lexical cue cl_id
T1 639-659 Cell denotes embryonic fibroblast http://purl.obolibrary.org/obo/CL:2000042
T2 649-659 Cell denotes fibroblast http://purl.obolibrary.org/obo/CL:0000057