PubMed:23458625 / 1148-1500 JSONTXT

Annnotations TAB JSON ListView MergeView

{"target":"https://pubannotation.org/docs/sourcedb/PubMed/sourceid/23458625","sourcedb":"PubMed","sourceid":"23458625","source_url":"http://www.ncbi.nlm.nih.gov/pubmed/23458625","text":"Interaction analyses identified the large intermediate filament family, the protein folding network and adapter proteins in focal adhesion networks, which included the CDC42 and RHOA signaling pathways that may have potential for identifying phenotypic states representing poorly and moderately differentiated states of CRC, with or without metastases.","tracks":[{"project":"DisGeNET","denotations":[{"id":"T0","span":{"begin":168,"end":173},"obj":"gene:998"},{"id":"T1","span":{"begin":341,"end":351},"obj":"disease:C0027627"},{"id":"T2","span":{"begin":168,"end":173},"obj":"gene:998"},{"id":"T3","span":{"begin":341,"end":351},"obj":"disease:C2939419"}],"relations":[{"id":"R1","pred":"associated_with","subj":"T0","obj":"T1"},{"id":"R2","pred":"associated_with","subj":"T2","obj":"T3"}],"namespaces":[{"prefix":"gene","uri":"http://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"disease","uri":"http://purl.bioontology.org/ontology/MEDLINEPLUS/"}],"attributes":[{"subj":"T0","pred":"source","obj":"DisGeNET"},{"subj":"T1","pred":"source","obj":"DisGeNET"},{"subj":"T2","pred":"source","obj":"DisGeNET"},{"subj":"T3","pred":"source","obj":"DisGeNET"}]},{"project":"GlyCosmos600-FMA","denotations":[{"id":"T18","span":{"begin":42,"end":63},"obj":"Body_part"},{"id":"T19","span":{"begin":76,"end":83},"obj":"Body_part"},{"id":"T20","span":{"begin":112,"end":120},"obj":"Body_part"}],"attributes":[{"id":"A18","pred":"fma_id","subj":"T18","obj":"http://purl.org/sig/ont/fma/fma63851"},{"id":"A19","pred":"fma_id","subj":"T19","obj":"http://purl.org/sig/ont/fma/fma67257"},{"id":"A20","pred":"fma_id","subj":"T20","obj":"http://purl.org/sig/ont/fma/fma67257"},{"subj":"T18","pred":"source","obj":"GlyCosmos600-FMA"},{"subj":"T19","pred":"source","obj":"GlyCosmos600-FMA"},{"subj":"T20","pred":"source","obj":"GlyCosmos600-FMA"}]},{"project":"DisGeNET5_gene_disease","denotations":[{"id":"23458625-5#168#173#gene998","span":{"begin":168,"end":173},"obj":"gene998"},{"id":"23458625-5#341#351#diseaseC0027627","span":{"begin":341,"end":351},"obj":"diseaseC0027627"}],"relations":[{"id":"168#173#gene998341#351#diseaseC0027627","pred":"associated_with","subj":"23458625-5#168#173#gene998","obj":"23458625-5#341#351#diseaseC0027627"}],"attributes":[{"subj":"23458625-5#168#173#gene998","pred":"source","obj":"DisGeNET5_gene_disease"},{"subj":"23458625-5#341#351#diseaseC0027627","pred":"source","obj":"DisGeNET5_gene_disease"}]},{"project":"GlyCosmos600-GlycoGenes","denotations":[{"id":"PD-GlycoGenes-B_T1","span":{"begin":36,"end":41},"obj":"GGDB:LARGE"}],"attributes":[{"subj":"PD-GlycoGenes-B_T1","pred":"source","obj":"GlyCosmos600-GlycoGenes"}]},{"project":"sentences","denotations":[{"id":"TextSentencer_T6","span":{"begin":0,"end":352},"obj":"Sentence"},{"id":"T6","span":{"begin":0,"end":352},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"TextSentencer_T6","pred":"source","obj":"sentences"},{"subj":"T6","pred":"source","obj":"sentences"}]},{"project":"pubmed-enju-pas","denotations":[{"id":"EnjuParser_T186","span":{"begin":0,"end":11},"obj":"NN"},{"id":"EnjuParser_T187","span":{"begin":12,"end":20},"obj":"NNS"},{"id":"EnjuParser_T188","span":{"begin":21,"end":31},"obj":"VBD"},{"id":"EnjuParser_T189","span":{"begin":32,"end":35},"obj":"DT"},{"id":"EnjuParser_T190","span":{"begin":36,"end":41},"obj":"JJ"},{"id":"EnjuParser_T191","span":{"begin":42,"end":54},"obj":"JJ"},{"id":"EnjuParser_T192","span":{"begin":55,"end":63},"obj":"NN"},{"id":"EnjuParser_T193","span":{"begin":64,"end":70},"obj":"NN"},{"id":"EnjuParser_T194","span":{"begin":70,"end":71},"obj":"-COMMA-"},{"id":"EnjuParser_T195","span":{"begin":72,"end":75},"obj":"DT"},{"id":"EnjuParser_T196","span":{"begin":76,"end":83},"obj":"NN"},{"id":"EnjuParser_T197","span":{"begin":84,"end":91},"obj":"NN"},{"id":"EnjuParser_T198","span":{"begin":92,"end":99},"obj":"NN"},{"id":"EnjuParser_T199","span":{"begin":100,"end":103},"obj":"CC"},{"id":"EnjuParser_T200","span":{"begin":104,"end":111},"obj":"NN"},{"id":"EnjuParser_T201","span":{"begin":112,"end":120},"obj":"NNS"},{"id":"EnjuParser_T202","span":{"begin":121,"end":123},"obj":"IN"},{"id":"EnjuParser_T203","span":{"begin":124,"end":129},"obj":"JJ"},{"id":"EnjuParser_T204","span":{"begin":130,"end":138},"obj":"NN"},{"id":"EnjuParser_T205","span":{"begin":139,"end":147},"obj":"NNS"},{"id":"EnjuParser_T206","span":{"begin":147,"end":148},"obj":"-COMMA-"},{"id":"EnjuParser_T207","span":{"begin":149,"end":154},"obj":"WDT"},{"id":"EnjuParser_T208","span":{"begin":155,"end":163},"obj":"VBD"},{"id":"EnjuParser_T209","span":{"begin":164,"end":167},"obj":"DT"},{"id":"EnjuParser_T210","span":{"begin":168,"end":173},"obj":"NN"},{"id":"EnjuParser_T211","span":{"begin":174,"end":177},"obj":"CC"},{"id":"EnjuParser_T212","span":{"begin":178,"end":182},"obj":"NN"},{"id":"EnjuParser_T213","span":{"begin":183,"end":192},"obj":"NN"},{"id":"EnjuParser_T214","span":{"begin":193,"end":201},"obj":"NNS"},{"id":"EnjuParser_T215","span":{"begin":202,"end":206},"obj":"WDT"},{"id":"EnjuParser_T216","span":{"begin":207,"end":210},"obj":"MD"},{"id":"EnjuParser_T217","span":{"begin":211,"end":215},"obj":"VB"},{"id":"EnjuParser_T218","span":{"begin":216,"end":225},"obj":"NN"},{"id":"EnjuParser_T219","span":{"begin":226,"end":229},"obj":"IN"},{"id":"EnjuParser_T220","span":{"begin":230,"end":241},"obj":"VBG"},{"id":"EnjuParser_T221","span":{"begin":242,"end":252},"obj":"JJ"},{"id":"EnjuParser_T222","span":{"begin":253,"end":259},"obj":"NNS"},{"id":"EnjuParser_T223","span":{"begin":260,"end":272},"obj":"VBG"},{"id":"EnjuParser_T224","span":{"begin":273,"end":279},"obj":"RB"},{"id":"EnjuParser_T225","span":{"begin":280,"end":283},"obj":"CC"},{"id":"EnjuParser_T226","span":{"begin":284,"end":294},"obj":"RB"},{"id":"EnjuParser_T227","span":{"begin":295,"end":309},"obj":"VBN"},{"id":"EnjuParser_T228","span":{"begin":310,"end":316},"obj":"NNS"},{"id":"EnjuParser_T229","span":{"begin":317,"end":319},"obj":"IN"},{"id":"EnjuParser_T230","span":{"begin":320,"end":323},"obj":"NN"},{"id":"EnjuParser_T231","span":{"begin":323,"end":324},"obj":"-COMMA-"},{"id":"EnjuParser_T232","span":{"begin":325,"end":329},"obj":"IN"},{"id":"EnjuParser_T233","span":{"begin":330,"end":332},"obj":"CC"},{"id":"EnjuParser_T234","span":{"begin":333,"end":340},"obj":"IN"},{"id":"EnjuParser_T235","span":{"begin":341,"end":351},"obj":"NNS"}],"relations":[{"id":"EnjuParser_R190","pred":"arg1Of","subj":"EnjuParser_T187","obj":"EnjuParser_T186"},{"id":"EnjuParser_R191","pred":"arg1Of","subj":"EnjuParser_T187","obj":"EnjuParser_T188"},{"id":"EnjuParser_R192","pred":"arg2Of","subj":"EnjuParser_T199","obj":"EnjuParser_T188"},{"id":"EnjuParser_R193","pred":"arg1Of","subj":"EnjuParser_T193","obj":"EnjuParser_T189"},{"id":"EnjuParser_R194","pred":"arg1Of","subj":"EnjuParser_T193","obj":"EnjuParser_T190"},{"id":"EnjuParser_R195","pred":"arg1Of","subj":"EnjuParser_T193","obj":"EnjuParser_T191"},{"id":"EnjuParser_R196","pred":"arg1Of","subj":"EnjuParser_T193","obj":"EnjuParser_T192"},{"id":"EnjuParser_R197","pred":"arg1Of","subj":"EnjuParser_T193","obj":"EnjuParser_T194"},{"id":"EnjuParser_R198","pred":"arg2Of","subj":"EnjuParser_T198","obj":"EnjuParser_T194"},{"id":"EnjuParser_R199","pred":"arg1Of","subj":"EnjuParser_T198","obj":"EnjuParser_T195"},{"id":"EnjuParser_R200","pred":"arg1Of","subj":"EnjuParser_T198","obj":"EnjuParser_T196"},{"id":"EnjuParser_R201","pred":"arg1Of","subj":"EnjuParser_T198","obj":"EnjuParser_T197"},{"id":"EnjuParser_R202","pred":"arg1Of","subj":"EnjuParser_T193","obj":"EnjuParser_T199"},{"id":"EnjuParser_R203","pred":"arg2Of","subj":"EnjuParser_T201","obj":"EnjuParser_T199"},{"id":"EnjuParser_R204","pred":"arg1Of","subj":"EnjuParser_T201","obj":"EnjuParser_T200"},{"id":"EnjuParser_R205","pred":"arg1Of","subj":"EnjuParser_T201","obj":"EnjuParser_T202"},{"id":"EnjuParser_R206","pred":"arg2Of","subj":"EnjuParser_T205","obj":"EnjuParser_T202"},{"id":"EnjuParser_R207","pred":"arg1Of","subj":"EnjuParser_T205","obj":"EnjuParser_T203"},{"id":"EnjuParser_R208","pred":"arg1Of","subj":"EnjuParser_T205","obj":"EnjuParser_T204"},{"id":"EnjuParser_R209","pred":"arg1Of","subj":"EnjuParser_T205","obj":"EnjuParser_T206"},{"id":"EnjuParser_R210","pred":"arg1Of","subj":"EnjuParser_T205","obj":"EnjuParser_T207"},{"id":"EnjuParser_R211","pred":"arg1Of","subj":"EnjuParser_T205","obj":"EnjuParser_T208"},{"id":"EnjuParser_R212","pred":"arg2Of","subj":"EnjuParser_T214","obj":"EnjuParser_T208"},{"id":"EnjuParser_R213","pred":"arg1Of","subj":"EnjuParser_T214","obj":"EnjuParser_T209"},{"id":"EnjuParser_R214","pred":"arg1Of","subj":"EnjuParser_T214","obj":"EnjuParser_T210"},{"id":"EnjuParser_R215","pred":"arg1Of","subj":"EnjuParser_T210","obj":"EnjuParser_T211"},{"id":"EnjuParser_R216","pred":"arg2Of","subj":"EnjuParser_T212","obj":"EnjuParser_T211"},{"id":"EnjuParser_R217","pred":"arg1Of","subj":"EnjuParser_T214","obj":"EnjuParser_T212"},{"id":"EnjuParser_R218","pred":"arg1Of","subj":"EnjuParser_T214","obj":"EnjuParser_T213"},{"id":"EnjuParser_R219","pred":"arg1Of","subj":"EnjuParser_T214","obj":"EnjuParser_T215"},{"id":"EnjuParser_R220","pred":"arg1Of","subj":"EnjuParser_T214","obj":"EnjuParser_T216"},{"id":"EnjuParser_R221","pred":"arg2Of","subj":"EnjuParser_T217","obj":"EnjuParser_T216"},{"id":"EnjuParser_R222","pred":"arg1Of","subj":"EnjuParser_T214","obj":"EnjuParser_T217"},{"id":"EnjuParser_R223","pred":"arg2Of","subj":"EnjuParser_T218","obj":"EnjuParser_T217"},{"id":"EnjuParser_R224","pred":"arg1Of","subj":"EnjuParser_T218","obj":"EnjuParser_T219"},{"id":"EnjuParser_R225","pred":"arg2Of","subj":"EnjuParser_T220","obj":"EnjuParser_T219"},{"id":"EnjuParser_R226","pred":"arg2Of","subj":"EnjuParser_T222","obj":"EnjuParser_T220"},{"id":"EnjuParser_R227","pred":"arg1Of","subj":"EnjuParser_T222","obj":"EnjuParser_T221"},{"id":"EnjuParser_R228","pred":"arg1Of","subj":"EnjuParser_T222","obj":"EnjuParser_T223"},{"id":"EnjuParser_R229","pred":"arg2Of","subj":"EnjuParser_T228","obj":"EnjuParser_T223"},{"id":"EnjuParser_R230","pred":"arg1Of","subj":"EnjuParser_T227","obj":"EnjuParser_T224"},{"id":"EnjuParser_R231","pred":"arg1Of","subj":"EnjuParser_T224","obj":"EnjuParser_T225"},{"id":"EnjuParser_R232","pred":"arg2Of","subj":"EnjuParser_T226","obj":"EnjuParser_T225"},{"id":"EnjuParser_R233","pred":"arg1Of","subj":"EnjuParser_T227","obj":"EnjuParser_T226"},{"id":"EnjuParser_R234","pred":"arg1Of","subj":"EnjuParser_T228","obj":"EnjuParser_T227"},{"id":"EnjuParser_R235","pred":"arg1Of","subj":"EnjuParser_T228","obj":"EnjuParser_T229"},{"id":"EnjuParser_R236","pred":"arg2Of","subj":"EnjuParser_T230","obj":"EnjuParser_T229"},{"id":"EnjuParser_R237","pred":"arg1Of","subj":"EnjuParser_T220","obj":"EnjuParser_T231"},{"id":"EnjuParser_R238","pred":"arg1Of","subj":"EnjuParser_T220","obj":"EnjuParser_T232"},{"id":"EnjuParser_R239","pred":"arg2Of","subj":"EnjuParser_T235","obj":"EnjuParser_T232"},{"id":"EnjuParser_R240","pred":"arg1Of","subj":"EnjuParser_T232","obj":"EnjuParser_T233"},{"id":"EnjuParser_R241","pred":"arg2Of","subj":"EnjuParser_T234","obj":"EnjuParser_T233"},{"id":"EnjuParser_R242","pred":"arg1Of","subj":"EnjuParser_T220","obj":"EnjuParser_T234"},{"id":"EnjuParser_R243","pred":"arg2Of","subj":"EnjuParser_T235","obj":"EnjuParser_T234"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"attributes":[{"subj":"EnjuParser_T186","pred":"source","obj":"pubmed-enju-pas"},{"subj":"EnjuParser_T187","pred":"source","obj":"pubmed-enju-pas"},{"subj":"EnjuParser_T188","pred":"source","obj":"pubmed-enju-pas"},{"subj":"EnjuParser_T189","pred":"source","obj":"pubmed-enju-pas"},{"subj":"EnjuParser_T190","pred":"source","obj":"pubmed-enju-pas"},{"subj":"EnjuParser_T191","pred":"source","obj":"pubmed-enju-pas"},{"subj":"EnjuParser_T192","pred":"source","obj":"pubmed-enju-pas"},{"subj":"EnjuParser_T193","pred":"source","obj":"pubmed-enju-pas"},{"subj":"EnjuParser_T194","pred":"source","obj":"pubmed-enju-pas"},{"subj":"EnjuParser_T195","pred":"source","obj":"pubmed-enju-pas"},{"subj":"EnjuParser_T196","pred":"source","obj":"pubmed-enju-pas"},{"subj":"EnjuParser_T197","pred":"source","obj":"pubmed-enju-pas"},{"subj":"EnjuParser_T198","pred":"source","obj":"pubmed-enju-pas"},{"subj":"EnjuParser_T199","pred":"source","obj":"pubmed-enju-pas"},{"subj":"EnjuParser_T200","pred":"source","obj":"pubmed-enju-pas"},{"subj":"EnjuParser_T201","pred":"source","obj":"pubmed-enju-pas"},{"subj":"EnjuParser_T202","pred":"source","obj":"pubmed-enju-pas"},{"subj":"EnjuParser_T203","pred":"source","obj":"pubmed-enju-pas"},{"subj":"EnjuParser_T204","pred":"source","obj":"pubmed-enju-pas"},{"subj":"EnjuParser_T205","pred":"source","obj":"pubmed-enju-pas"},{"subj":"EnjuParser_T206","pred":"source","obj":"pubmed-enju-pas"},{"subj":"EnjuParser_T207","pred":"source","obj":"pubmed-enju-pas"},{"subj":"EnjuParser_T208","pred":"source","obj":"pubmed-enju-pas"},{"subj":"EnjuParser_T209","pred":"source","obj":"pubmed-enju-pas"},{"subj":"EnjuParser_T210","pred":"source","obj":"pubmed-enju-pas"},{"subj":"EnjuParser_T211","pred":"source","obj":"pubmed-enju-pas"},{"subj":"EnjuParser_T212","pred":"source","obj":"pubmed-enju-pas"},{"subj":"EnjuParser_T213","pred":"source","obj":"pubmed-enju-pas"},{"subj":"EnjuParser_T214","pred":"source","obj":"pubmed-enju-pas"},{"subj":"EnjuParser_T215","pred":"source","obj":"pubmed-enju-pas"},{"subj":"EnjuParser_T216","pred":"source","obj":"pubmed-enju-pas"},{"subj":"EnjuParser_T217","pred":"source","obj":"pubmed-enju-pas"},{"subj":"EnjuParser_T218","pred":"source","obj":"pubmed-enju-pas"},{"subj":"EnjuParser_T219","pred":"source","obj":"pubmed-enju-pas"},{"subj":"EnjuParser_T220","pred":"source","obj":"pubmed-enju-pas"},{"subj":"EnjuParser_T221","pred":"source","obj":"pubmed-enju-pas"},{"subj":"EnjuParser_T222","pred":"source","obj":"pubmed-enju-pas"},{"subj":"EnjuParser_T223","pred":"source","obj":"pubmed-enju-pas"},{"subj":"EnjuParser_T224","pred":"source","obj":"pubmed-enju-pas"},{"subj":"EnjuParser_T225","pred":"source","obj":"pubmed-enju-pas"},{"subj":"EnjuParser_T226","pred":"source","obj":"pubmed-enju-pas"},{"subj":"EnjuParser_T227","pred":"source","obj":"pubmed-enju-pas"},{"subj":"EnjuParser_T228","pred":"source","obj":"pubmed-enju-pas"},{"subj":"EnjuParser_T229","pred":"source","obj":"pubmed-enju-pas"},{"subj":"EnjuParser_T230","pred":"source","obj":"pubmed-enju-pas"},{"subj":"EnjuParser_T231","pred":"source","obj":"pubmed-enju-pas"},{"subj":"EnjuParser_T232","pred":"source","obj":"pubmed-enju-pas"},{"subj":"EnjuParser_T233","pred":"source","obj":"pubmed-enju-pas"},{"subj":"EnjuParser_T234","pred":"source","obj":"pubmed-enju-pas"},{"subj":"EnjuParser_T235","pred":"source","obj":"pubmed-enju-pas"}]},{"project":"mondo_disease","denotations":[{"id":"T5","span":{"begin":320,"end":323},"obj":"Disease"}],"attributes":[{"id":"A5","pred":"mondo_id","subj":"T5","obj":"http://purl.obolibrary.org/obo/MONDO_0005575"},{"id":"A6","pred":"mondo_id","subj":"T5","obj":"http://purl.obolibrary.org/obo/MONDO_0024331"},{"subj":"T5","pred":"source","obj":"mondo_disease"}]},{"project":"Anatomy-UBERON","denotations":[{"id":"T4","span":{"begin":42,"end":63},"obj":"Body_part"}],"attributes":[{"id":"A4","pred":"uberon_id","subj":"T4","obj":"http://purl.obolibrary.org/obo/GO_0005882"},{"subj":"T4","pred":"source","obj":"Anatomy-UBERON"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"DisGeNET","color":"#93e8ec","default":true},{"id":"GlyCosmos600-FMA","color":"#ecd593"},{"id":"DisGeNET5_gene_disease","color":"#bb93ec"},{"id":"GlyCosmos600-GlycoGenes","color":"#93eca1"},{"id":"sentences","color":"#ec939e"},{"id":"pubmed-enju-pas","color":"#93b8ec"},{"id":"mondo_disease","color":"#d2ec93"},{"id":"Anatomy-UBERON","color":"#ec93ec"}]}]}}