PubMed:2335803 JSONTXT

Annnotations TAB JSON ListView MergeView

{"target":"https://pubannotation.org/docs/sourcedb/PubMed/sourceid/2335803","sourcedb":"PubMed","sourceid":"2335803","source_url":"http://www.ncbi.nlm.nih.gov/pubmed/2335803","text":"Quantitative immunohistochemical analysis of mononuclear infiltrates in breast carcinomas--correlation with tumour differentiation.\nInflammatory infiltrates were analysed in tissue sections of 76 breast carcinomas by counting the percentage of macrophages, IgA+ and IgG+ plasma cells, T cells with their subpopulations, and natural killer cells, and by measuring postcapillary venules (PCVs, found in 12 cases) within the infiltrates. These parameters were correlated with nuclear grade and biochemically determined hormone receptor status, known markers of tumour differentiation. A direct correlation was found between the extent of inflammation and nuclear grade (P less than 0.0001), and an inverse correlation between inflammation and oestrogen receptor (OR) positivity (P less than 0.05) as well as inflammation and progesterone receptor (PR) positivity (P less than 0.05). The percentage of the OKT8+ suppressor/cytotoxic T cells increased when the inflammation expanded from scanty to moderate (P less than 0.02). The diameter of the PCVs also increased with increasing inflammatory infiltrate (P less than 0.02). In addition, a direct correlation exists between the diameter of the PCVs and both the percentage of the OKT8+ T cells (P less than 0.04) and the Leu-7+ natural killer cells (P less than 0.03).","tracks":[{"project":"genia-medco-coref","denotations":[{"id":"C1","span":{"begin":108,"end":130},"obj":"NP"},{"id":"C2","span":{"begin":132,"end":156},"obj":"NP"},{"id":"C3","span":{"begin":285,"end":292},"obj":"NP"},{"id":"C4","span":{"begin":298,"end":303},"obj":"NP"},{"id":"C5","span":{"begin":363,"end":410},"obj":"NP"},{"id":"C6","span":{"begin":418,"end":433},"obj":"NP"},{"id":"C7","span":{"begin":473,"end":539},"obj":"NP"},{"id":"C9","span":{"begin":558,"end":580},"obj":"NP"},{"id":"C8","span":{"begin":541,"end":580},"obj":"NP"},{"id":"C10","span":{"begin":635,"end":647},"obj":"NP"},{"id":"C11","span":{"begin":723,"end":735},"obj":"NP"},{"id":"C12","span":{"begin":805,"end":817},"obj":"NP"},{"id":"C13","span":{"begin":898,"end":936},"obj":"NP"},{"id":"C14","span":{"begin":952,"end":968},"obj":"NP"},{"id":"C16","span":{"begin":1038,"end":1046},"obj":"NP"},{"id":"C15","span":{"begin":1022,"end":1046},"obj":"NP"},{"id":"C18","span":{"begin":1187,"end":1195},"obj":"NP"},{"id":"C17","span":{"begin":1171,"end":1195},"obj":"NP"},{"id":"C19","span":{"begin":1223,"end":1240},"obj":"NP"}],"relations":[{"id":"R1","pred":"coref-pron","subj":"C4","obj":"C3"},{"id":"R2","pred":"coref-ident","subj":"C6","obj":"C2"},{"id":"R3","pred":"coref-ident","subj":"C9","obj":"C1"},{"id":"R4","pred":"coref-appos","subj":"C8","obj":"C7"},{"id":"R5","pred":"coref-ident","subj":"C11","obj":"C10"},{"id":"R6","pred":"coref-ident","subj":"C12","obj":"C11"},{"id":"R7","pred":"coref-ident","subj":"C14","obj":"C11"},{"id":"R8","pred":"coref-ident","subj":"C16","obj":"C5"},{"id":"R9","pred":"coref-ident","subj":"C18","obj":"C16"},{"id":"R10","pred":"coref-ident","subj":"C17","obj":"C15"},{"id":"R11","pred":"coref-ident","subj":"C19","obj":"C13"}],"attributes":[{"subj":"C1","pred":"source","obj":"genia-medco-coref"},{"subj":"C2","pred":"source","obj":"genia-medco-coref"},{"subj":"C3","pred":"source","obj":"genia-medco-coref"},{"subj":"C4","pred":"source","obj":"genia-medco-coref"},{"subj":"C5","pred":"source","obj":"genia-medco-coref"},{"subj":"C6","pred":"source","obj":"genia-medco-coref"},{"subj":"C7","pred":"source","obj":"genia-medco-coref"},{"subj":"C9","pred":"source","obj":"genia-medco-coref"},{"subj":"C8","pred":"source","obj":"genia-medco-coref"},{"subj":"C10","pred":"source","obj":"genia-medco-coref"},{"subj":"C11","pred":"source","obj":"genia-medco-coref"},{"subj":"C12","pred":"source","obj":"genia-medco-coref"},{"subj":"C13","pred":"source","obj":"genia-medco-coref"},{"subj":"C14","pred":"source","obj":"genia-medco-coref"},{"subj":"C16","pred":"source","obj":"genia-medco-coref"},{"subj":"C15","pred":"source","obj":"genia-medco-coref"},{"subj":"C18","pred":"source","obj":"genia-medco-coref"},{"subj":"C17","pred":"source","obj":"genia-medco-coref"},{"subj":"C19","pred":"source","obj":"genia-medco-coref"}]},{"project":"PubmedHPO","denotations":[{"id":"T1","span":{"begin":196,"end":213},"obj":"HP_0003002"},{"id":"T2","span":{"begin":558,"end":564},"obj":"HP_0002664"}],"attributes":[{"subj":"T1","pred":"source","obj":"PubmedHPO"},{"subj":"T2","pred":"source","obj":"PubmedHPO"}]},{"project":"jnlpba-st-training","denotations":[{"id":"T1","span":{"begin":45,"end":68},"obj":"cell_type"},{"id":"T2","span":{"begin":132,"end":156},"obj":"cell_type"},{"id":"T3","span":{"begin":244,"end":255},"obj":"cell_type"},{"id":"T4","span":{"begin":257,"end":283},"obj":"cell_type"},{"id":"T5","span":{"begin":285,"end":292},"obj":"cell_type"},{"id":"T6","span":{"begin":324,"end":344},"obj":"cell_type"},{"id":"T7","span":{"begin":740,"end":758},"obj":"protein"},{"id":"T8","span":{"begin":760,"end":762},"obj":"protein"},{"id":"T9","span":{"begin":822,"end":843},"obj":"protein"},{"id":"T10","span":{"begin":845,"end":847},"obj":"protein"},{"id":"T11","span":{"begin":902,"end":936},"obj":"cell_line"},{"id":"T12","span":{"begin":1227,"end":1240},"obj":"cell_line"},{"id":"T13","span":{"begin":1275,"end":1295},"obj":"cell_type"}],"attributes":[{"subj":"T1","pred":"source","obj":"jnlpba-st-training"},{"subj":"T2","pred":"source","obj":"jnlpba-st-training"},{"subj":"T3","pred":"source","obj":"jnlpba-st-training"},{"subj":"T4","pred":"source","obj":"jnlpba-st-training"},{"subj":"T5","pred":"source","obj":"jnlpba-st-training"},{"subj":"T6","pred":"source","obj":"jnlpba-st-training"},{"subj":"T7","pred":"source","obj":"jnlpba-st-training"},{"subj":"T8","pred":"source","obj":"jnlpba-st-training"},{"subj":"T9","pred":"source","obj":"jnlpba-st-training"},{"subj":"T10","pred":"source","obj":"jnlpba-st-training"},{"subj":"T11","pred":"source","obj":"jnlpba-st-training"},{"subj":"T12","pred":"source","obj":"jnlpba-st-training"},{"subj":"T13","pred":"source","obj":"jnlpba-st-training"}]},{"project":"pubmed-sentences-benchmark","denotations":[{"id":"S1","span":{"begin":0,"end":131},"obj":"Sentence"},{"id":"S2","span":{"begin":132,"end":434},"obj":"Sentence"},{"id":"S3","span":{"begin":435,"end":581},"obj":"Sentence"},{"id":"S4","span":{"begin":582,"end":879},"obj":"Sentence"},{"id":"S5","span":{"begin":880,"end":1021},"obj":"Sentence"},{"id":"S6","span":{"begin":1022,"end":1121},"obj":"Sentence"},{"id":"S7","span":{"begin":1122,"end":1315},"obj":"Sentence"}],"attributes":[{"subj":"S1","pred":"source","obj":"pubmed-sentences-benchmark"},{"subj":"S2","pred":"source","obj":"pubmed-sentences-benchmark"},{"subj":"S3","pred":"source","obj":"pubmed-sentences-benchmark"},{"subj":"S4","pred":"source","obj":"pubmed-sentences-benchmark"},{"subj":"S5","pred":"source","obj":"pubmed-sentences-benchmark"},{"subj":"S6","pred":"source","obj":"pubmed-sentences-benchmark"},{"subj":"S7","pred":"source","obj":"pubmed-sentences-benchmark"}]},{"project":"GENIAcorpus","denotations":[{"id":"T1","span":{"begin":13,"end":41},"obj":"other_name"},{"id":"T2","span":{"begin":45,"end":68},"obj":"cell_type"},{"id":"T3","span":{"begin":72,"end":89},"obj":"tissue"},{"id":"T4","span":{"begin":108,"end":130},"obj":"other_name"},{"id":"T5","span":{"begin":132,"end":156},"obj":"cell_type"},{"id":"T6","span":{"begin":196,"end":213},"obj":"tissue"},{"id":"T7","span":{"begin":244,"end":255},"obj":"cell_type"},{"id":"T8","span":{"begin":285,"end":292},"obj":"cell_type"},{"id":"T9","span":{"begin":324,"end":344},"obj":"cell_type"},{"id":"T10","span":{"begin":363,"end":384},"obj":"tissue"},{"id":"T11","span":{"begin":386,"end":390},"obj":"tissue"},{"id":"T12","span":{"begin":473,"end":486},"obj":"other_name"},{"id":"T13","span":{"begin":516,"end":539},"obj":"other_name"},{"id":"T14","span":{"begin":558,"end":580},"obj":"other_name"},{"id":"T15","span":{"begin":635,"end":647},"obj":"other_name"},{"id":"T16","span":{"begin":652,"end":665},"obj":"other_name"},{"id":"T17","span":{"begin":723,"end":735},"obj":"other_name"},{"id":"T18","span":{"begin":740,"end":758},"obj":"protein_family_or_group"},{"id":"T19","span":{"begin":760,"end":762},"obj":"protein_family_or_group"},{"id":"T20","span":{"begin":805,"end":817},"obj":"other_name"},{"id":"T21","span":{"begin":822,"end":843},"obj":"protein_family_or_group"},{"id":"T22","span":{"begin":845,"end":847},"obj":"protein_family_or_group"},{"id":"T23","span":{"begin":902,"end":928},"obj":"cell_line"},{"id":"T24","span":{"begin":929,"end":936},"obj":"cell_type"},{"id":"T25","span":{"begin":956,"end":968},"obj":"other_name"},{"id":"T26","span":{"begin":1042,"end":1046},"obj":"tissue"},{"id":"T27","span":{"begin":1191,"end":1195},"obj":"tissue"},{"id":"T28","span":{"begin":1227,"end":1232},"obj":"cell_line"},{"id":"T29","span":{"begin":1233,"end":1240},"obj":"cell_type"},{"id":"T30","span":{"begin":1275,"end":1295},"obj":"cell_type"}],"attributes":[{"subj":"T1","pred":"source","obj":"GENIAcorpus"},{"subj":"T2","pred":"source","obj":"GENIAcorpus"},{"subj":"T3","pred":"source","obj":"GENIAcorpus"},{"subj":"T4","pred":"source","obj":"GENIAcorpus"},{"subj":"T5","pred":"source","obj":"GENIAcorpus"},{"subj":"T6","pred":"source","obj":"GENIAcorpus"},{"subj":"T7","pred":"source","obj":"GENIAcorpus"},{"subj":"T8","pred":"source","obj":"GENIAcorpus"},{"subj":"T9","pred":"source","obj":"GENIAcorpus"},{"subj":"T10","pred":"source","obj":"GENIAcorpus"},{"subj":"T11","pred":"source","obj":"GENIAcorpus"},{"subj":"T12","pred":"source","obj":"GENIAcorpus"},{"subj":"T13","pred":"source","obj":"GENIAcorpus"},{"subj":"T14","pred":"source","obj":"GENIAcorpus"},{"subj":"T15","pred":"source","obj":"GENIAcorpus"},{"subj":"T16","pred":"source","obj":"GENIAcorpus"},{"subj":"T17","pred":"source","obj":"GENIAcorpus"},{"subj":"T18","pred":"source","obj":"GENIAcorpus"},{"subj":"T19","pred":"source","obj":"GENIAcorpus"},{"subj":"T20","pred":"source","obj":"GENIAcorpus"},{"subj":"T21","pred":"source","obj":"GENIAcorpus"},{"subj":"T22","pred":"source","obj":"GENIAcorpus"},{"subj":"T23","pred":"source","obj":"GENIAcorpus"},{"subj":"T24","pred":"source","obj":"GENIAcorpus"},{"subj":"T25","pred":"source","obj":"GENIAcorpus"},{"subj":"T26","pred":"source","obj":"GENIAcorpus"},{"subj":"T27","pred":"source","obj":"GENIAcorpus"},{"subj":"T28","pred":"source","obj":"GENIAcorpus"},{"subj":"T29","pred":"source","obj":"GENIAcorpus"},{"subj":"T30","pred":"source","obj":"GENIAcorpus"}]},{"project":"Inflammaging","denotations":[{"id":"T1","span":{"begin":0,"end":131},"obj":"Sentence"},{"id":"T2","span":{"begin":132,"end":434},"obj":"Sentence"},{"id":"T3","span":{"begin":435,"end":581},"obj":"Sentence"},{"id":"T4","span":{"begin":582,"end":879},"obj":"Sentence"},{"id":"T5","span":{"begin":880,"end":1021},"obj":"Sentence"},{"id":"T6","span":{"begin":1022,"end":1121},"obj":"Sentence"},{"id":"T7","span":{"begin":1122,"end":1315},"obj":"Sentence"},{"id":"T1","span":{"begin":0,"end":131},"obj":"Sentence"},{"id":"T2","span":{"begin":132,"end":434},"obj":"Sentence"},{"id":"T3","span":{"begin":435,"end":581},"obj":"Sentence"},{"id":"T4","span":{"begin":582,"end":879},"obj":"Sentence"},{"id":"T5","span":{"begin":880,"end":1021},"obj":"Sentence"},{"id":"T6","span":{"begin":1022,"end":1121},"obj":"Sentence"},{"id":"T7","span":{"begin":1122,"end":1315},"obj":"Sentence"}],"attributes":[{"subj":"T1","pred":"source","obj":"Inflammaging"},{"subj":"T2","pred":"source","obj":"Inflammaging"},{"subj":"T3","pred":"source","obj":"Inflammaging"},{"subj":"T4","pred":"source","obj":"Inflammaging"},{"subj":"T5","pred":"source","obj":"Inflammaging"},{"subj":"T6","pred":"source","obj":"Inflammaging"},{"subj":"T7","pred":"source","obj":"Inflammaging"},{"subj":"T1","pred":"source","obj":"Inflammaging"},{"subj":"T2","pred":"source","obj":"Inflammaging"},{"subj":"T3","pred":"source","obj":"Inflammaging"},{"subj":"T4","pred":"source","obj":"Inflammaging"},{"subj":"T5","pred":"source","obj":"Inflammaging"},{"subj":"T6","pred":"source","obj":"Inflammaging"},{"subj":"T7","pred":"source","obj":"Inflammaging"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"genia-medco-coref","color":"#d4ec93","default":true},{"id":"PubmedHPO","color":"#ea93ec"},{"id":"jnlpba-st-training","color":"#93ecd0"},{"id":"pubmed-sentences-benchmark","color":"#ecb693"},{"id":"GENIAcorpus","color":"#9c93ec"},{"id":"Inflammaging","color":"#a3ec93"}]}]}}