PubMed:23069675 / 491-701
Annnotations
PubMed_ArguminSci
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T4 | 0-210 | DRI_Approach | denotes | We used wild-type (WT) and NP1 knockout (NP1-KO) mouse hippocampal cultures, modeled in vitro following exposure to oxygen glucose deprivation (OGD), and in vivo neonatal (P9-10) mouse model of HI brain injury. |
LitCoin-entities-OrganismTaxon-PD
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T1 | 49-54 | OrganismTaxon | denotes | mouse | NCBItxid:10090|NCBItxid:10088 |
| T3 | 179-184 | OrganismTaxon | denotes | mouse | NCBItxid:10090|NCBItxid:10088 |
LitCoin-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T5 | 0-210 | Sentence | denotes | We used wild-type (WT) and NP1 knockout (NP1-KO) mouse hippocampal cultures, modeled in vitro following exposure to oxygen glucose deprivation (OGD), and in vivo neonatal (P9-10) mouse model of HI brain injury. |
LitCoin-entities
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| 9148 | 27-30 | GeneOrGeneProduct | denotes | NP1 | NCBIGene:18164 |
| 9149 | 41-44 | GeneOrGeneProduct | denotes | NP1 | NCBIGene:18164 |
| 9150 | 49-54 | OrganismTaxon | denotes | mouse | NCBITaxon:10090 |
| 9151 | 116-122 | ChemicalEntity | denotes | oxygen | MESH:D010100 |
| 9152 | 123-130 | ChemicalEntity | denotes | glucose | MESH:D005947 |
| 9153 | 179-184 | OrganismTaxon | denotes | mouse | NCBITaxon:10090 |
| 9154 | 194-209 | DiseaseOrPhenotypicFeature | denotes | HI brain injury | MESH:D020925 |
LitCoin_Mondo
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T10 | 197-209 | DiseaseOrPhenotypicFeature | denotes | brain injury | 0043510 |
| T11 | 203-209 | DiseaseOrPhenotypicFeature | denotes | injury | 0021178 |
LitCoin-GeneOrGeneProduct-v0
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T13 | 27-30 | GeneOrGeneProduct | denotes | NP1 |
| T14 | 31-39 | GeneOrGeneProduct | denotes | knockout |
| T15 | 41-44 | GeneOrGeneProduct | denotes | NP1 |
| T16 | 197-202 | GeneOrGeneProduct | denotes | brain |
LitCoin-GeneOrGeneProduct-v2
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T9 | 27-30 | GeneOrGeneProduct | denotes | NP1 |
| T10 | 31-39 | GeneOrGeneProduct | denotes | knockout |
| T11 | 41-44 | GeneOrGeneProduct | denotes | NP1 |
| T12 | 197-202 | GeneOrGeneProduct | denotes | brain |
LitCoin-Disease-MeSH
| Id | Subject | Object | Predicate | Lexical cue | originalLabel |
|---|---|---|---|---|---|
| T9 | 197-209 | DiseaseOrPhenotypicFeature | denotes | brain injury | D001930 |
LitCoin-GeneOrGeneProduct-v3
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T6 | 27-30 | GeneOrGeneProduct | denotes | NP1 |
| T7 | 41-44 | GeneOrGeneProduct | denotes | NP1 |
LitCoin_Mondo_095
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T4 | 144-147 | DiseaseOrPhenotypicFeature | denotes | OGD | 0008150 |
| T5 | 197-209 | DiseaseOrPhenotypicFeature | denotes | brain injury | 0043510 |
LitCoin-MeSH-Disease-2
| Id | Subject | Object | Predicate | Lexical cue | ID: |
|---|---|---|---|---|---|
| T6 | 197-209 | DiseaseOrPhenotypicFeature | denotes | brain injury | D001930 |
LitCoin-MONDO_bioort2019
| Id | Subject | Object | Predicate | Lexical cue | #label |
|---|---|---|---|---|---|
| T4 | 197-209 | DiseaseOrPhenotypicFeature | denotes | brain injury | D001930 |
LitCoin-Chemical-MeSH-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | ID: |
|---|---|---|---|---|---|
| T1 | 116-122 | ChemicalEntity | denotes | oxygen | D010100|http://purl.obolibrary.org/obo/CHEBI_25805 |
| T3 | 123-130 | ChemicalEntity | denotes | glucose | D005947|http://purl.obolibrary.org/obo/CHEBI_4167|http://purl.obolibrary.org/obo/CHEBI_17234 |
LitCoin-NCBITaxon-2
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 49-54 | OrganismTaxon | denotes | mouse |
| T2 | 179-184 | OrganismTaxon | denotes | mouse |
LitCoin-training-merged
| Id | Subject | Object | Predicate | Lexical cue | #label | ID: |
|---|---|---|---|---|---|---|
| T3 | 123-130 | ChemicalEntity | denotes | glucose | http://purl.obolibrary.org/obo/CHEBI_17234|http://purl.obolibrary.org/obo/CHEBI_4167|D005947 | |
| T1 | 116-122 | ChemicalEntity | denotes | oxygen | http://purl.obolibrary.org/obo/CHEBI_25805|D010100 | |
| T3981 | 41-44 | GeneOrGeneProduct | denotes | NP1 | ||
| T23161 | 27-30 | GeneOrGeneProduct | denotes | NP1 | ||
| T47700 | 197-209 | DiseaseOrPhenotypicFeature | denotes | brain injury | D001930 | |
| T488 | 179-184 | OrganismTaxon | denotes | mouse | ||
| T52378 | 49-54 | OrganismTaxon | denotes | mouse |
Allie
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| SS1_23069675_4_0 | 8-17 | expanded | denotes | wild-type |
| SS2_23069675_4_0 | 19-21 | abbr | denotes | WT |
| SS1_23069675_4_1 | 27-39 | expanded | denotes | NP1 knockout |
| SS2_23069675_4_1 | 41-47 | abbr | denotes | NP1-KO |
| SS1_23069675_4_2 | 116-142 | expanded | denotes | oxygen glucose deprivation |
| SS2_23069675_4_2 | 144-147 | abbr | denotes | OGD |
| AE1_23069675_4_0 | SS1_23069675_4_0 | SS2_23069675_4_0 | abbreviatedTo | wild-type,WT |
| AE1_23069675_4_1 | SS1_23069675_4_1 | SS2_23069675_4_1 | abbreviatedTo | NP1 knockout,NP1-KO |
| AE1_23069675_4_2 | SS1_23069675_4_2 | SS2_23069675_4_2 | abbreviatedTo | oxygen glucose deprivation,OGD |