PubMed:23035012 / 887-1215
Annnotations
CL-cell
| Id | Subject | Object | Predicate | Lexical cue | cl_id |
|---|---|---|---|---|---|
| T18 | 47-56 | Cell | denotes | monocytic | http://purl.obolibrary.org/obo/CL:0000576|http://purl.obolibrary.org/obo/CL:0001054 |
| T20 | 145-154 | Cell | denotes | monocytes | http://purl.obolibrary.org/obo/CL:0000576|http://purl.obolibrary.org/obo/CL:0001054 |
| T22 | 155-166 | Cell | denotes | macrophages | http://purl.obolibrary.org/obo/CL:0000235|http://purl.obolibrary.org/obo/CL:0000394 |
| T24 | 171-183 | Cell | denotes | cancer cells | http://purl.obolibrary.org/obo/CL:0001064 |
Glycosmos6-MAT
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 89-93 | http://purl.obolibrary.org/obo/MAT_0000135 | denotes | lung |
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| TextSentencer_T6 | 0-328 | Sentence | denotes | We designed a co-culture model of THP-1 (human monocytic leukemia) cells and H157 (human lung carcinoma) cells mimicking the interaction between monocytes/macrophages and cancer cells that recapitulated the enhanced TGF-β production in Siglec-15 expressing THP-1 cells by the cellular interaction with sTn expressing H157 cells. |
| T6 | 0-328 | Sentence | denotes | We designed a co-culture model of THP-1 (human monocytic leukemia) cells and H157 (human lung carcinoma) cells mimicking the interaction between monocytes/macrophages and cancer cells that recapitulated the enhanced TGF-β production in Siglec-15 expressing THP-1 cells by the cellular interaction with sTn expressing H157 cells. |
| T6 | 0-328 | Sentence | denotes | We designed a co-culture model of THP-1 (human monocytic leukemia) cells and H157 (human lung carcinoma) cells mimicking the interaction between monocytes/macrophages and cancer cells that recapitulated the enhanced TGF-β production in Siglec-15 expressing THP-1 cells by the cellular interaction with sTn expressing H157 cells. |
GlycoBiology-FMA
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| _T27 | 47-56 | FMAID:167164 | denotes | monocytic |
| _T28 | 47-56 | FMAID:62864 | denotes | monocytic |
| _T29 | 67-72 | FMAID:169002 | denotes | cells |
| _T30 | 67-72 | FMAID:68646 | denotes | cells |
| _T31 | 89-93 | FMAID:7195 | denotes | lung |
| _T32 | 89-93 | FMAID:93670 | denotes | lung |
| _T33 | 89-93 | FMAID:169341 | denotes | lung |
| _T34 | 105-110 | FMAID:68646 | denotes | cells |
| _T35 | 105-110 | FMAID:169002 | denotes | cells |
| _T36 | 145-154 | FMAID:167164 | denotes | monocytes |
| _T37 | 145-154 | FMAID:62864 | denotes | monocytes |
| _T38 | 155-166 | FMAID:63261 | denotes | macrophages |
| _T39 | 155-166 | FMAID:167685 | denotes | macrophages |
| _T40 | 178-183 | FMAID:169002 | denotes | cells |
| _T41 | 178-183 | FMAID:68646 | denotes | cells |
| _T42 | 263-268 | FMAID:68646 | denotes | cells |
| _T43 | 263-268 | FMAID:169002 | denotes | cells |
| _T44 | 322-327 | FMAID:169002 | denotes | cells |
| _T45 | 322-327 | FMAID:68646 | denotes | cells |
uniprot-human
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T5 | 236-245 | http://www.uniprot.org/uniprot/Q6ZMC9 | denotes | Siglec-15 |
| T16 | 34-37 | http://www.uniprot.org/uniprot/P10070 | denotes | THP |
| T17 | 257-260 | http://www.uniprot.org/uniprot/P10070 | denotes | THP |
| T19 | 34-37 | http://www.uniprot.org/uniprot/P07911 | denotes | THP |
| T20 | 257-260 | http://www.uniprot.org/uniprot/P07911 | denotes | THP |
uniprot-mouse
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T2 | 34-37 | http://www.uniprot.org/uniprot/Q91X17 | denotes | THP |
| T3 | 257-260 | http://www.uniprot.org/uniprot/Q91X17 | denotes | THP |
GlycoBiology-NCBITAXON
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T6 | 14-16 | http://purl.bioontology.org/ontology/NCBITAXON/13893 | denotes | co |
| T7 | 67-72 | http://purl.bioontology.org/ontology/STY/T025 | denotes | cells |
| T8 | 94-103 | http://purl.bioontology.org/ontology/NCBITAXON/166034 | denotes | carcinoma |
| T9 | 105-110 | http://purl.bioontology.org/ontology/STY/T025 | denotes | cells |
| T10 | 171-177 | http://purl.bioontology.org/ontology/NCBITAXON/6754 | denotes | cancer |
| T11 | 178-183 | http://purl.bioontology.org/ontology/STY/T025 | denotes | cells |
| T12 | 263-268 | http://purl.bioontology.org/ontology/STY/T025 | denotes | cells |
| T13 | 322-327 | http://purl.bioontology.org/ontology/STY/T025 | denotes | cells |
GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T7 | 276-284 | http://purl.obolibrary.org/obo/GO_0007349 | denotes | cellular |
GO-CC
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T4 | 67-72 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T5 | 105-110 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T6 | 178-183 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T7 | 263-268 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T8 | 322-327 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
UBERON-AE
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T2 | 89-93 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lung |
PubmedHPO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T5 | 57-65 | HP_0001909 | denotes | leukemia |
| T6 | 171-177 | HP_0002664 | denotes | cancer |
GlycoBiology-MAT
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 89-93 | http://purl.obolibrary.org/obo/MAT_0000135 | denotes | lung |
performance-test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| PD-UBERON-AE-B_T2 | 89-93 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lung |
mondo_disease
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T6 | 47-65 | Disease | denotes | monocytic leukemia | http://purl.obolibrary.org/obo/MONDO_0004600|http://purl.obolibrary.org/obo/MONDO_0007896 |
| T8 | 89-103 | Disease | denotes | lung carcinoma | http://purl.obolibrary.org/obo/MONDO_0005138 |
| T9 | 171-177 | Disease | denotes | cancer | http://purl.obolibrary.org/obo/MONDO_0004992 |
Anatomy-MAT
| Id | Subject | Object | Predicate | Lexical cue | mat_id |
|---|---|---|---|---|---|
| T1 | 89-93 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/MAT_0000135 |
GlyCosmos15-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T6 | 57-65 | Phenotype | denotes | leukemia | HP:0001909 |
| T7 | 94-103 | Phenotype | denotes | carcinoma | HP:0030731 |
| T8 | 171-177 | Phenotype | denotes | cancer | HP:0002664 |
GlyCosmos15-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T6 | 47-65 | Disease | denotes | monocytic leukemia | http://purl.obolibrary.org/obo/MONDO_0004600|http://purl.obolibrary.org/obo/MONDO_0007896 |
| T8 | 89-103 | Disease | denotes | lung carcinoma | http://purl.obolibrary.org/obo/MONDO_0005138 |
| T9 | 171-177 | Disease | denotes | cancer | http://purl.obolibrary.org/obo/MONDO_0004992 |
GlyCosmos15-NCBITAXON
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T2 | 41-46 | OrganismTaxon | denotes | human | 9606 |
| T3 | 83-88 | OrganismTaxon | denotes | human | 9606 |
GlyCosmos15-CL
| Id | Subject | Object | Predicate | Lexical cue | cl_id |
|---|---|---|---|---|---|
| T18 | 47-56 | Cell | denotes | monocytic | http://purl.obolibrary.org/obo/CL:0000576|http://purl.obolibrary.org/obo/CL:0001054 |
| T20 | 145-154 | Cell | denotes | monocytes | http://purl.obolibrary.org/obo/CL:0000576|http://purl.obolibrary.org/obo/CL:0001054 |
| T22 | 155-166 | Cell | denotes | macrophages | http://purl.obolibrary.org/obo/CL:0000235|http://purl.obolibrary.org/obo/CL:0000394 |
| T24 | 171-183 | Cell | denotes | cancer cells | http://purl.obolibrary.org/obo/CL:0001064 |
GlyCosmos15-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T11 | 89-93 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
| T12 | 145-154 | Body_part | denotes | monocytes | http://purl.obolibrary.org/obo/CL_0000576|http://purl.obolibrary.org/obo/CL_0001054 |
| T14 | 155-166 | Body_part | denotes | macrophages | http://purl.obolibrary.org/obo/CL_0000235 |
GlyCosmos15-MAT
| Id | Subject | Object | Predicate | Lexical cue | mat_id |
|---|---|---|---|---|---|
| T1 | 89-93 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/MAT_0000135 |
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| TextSentencer_T6 | 0-328 | Sentence | denotes | We designed a co-culture model of THP-1 (human monocytic leukemia) cells and H157 (human lung carcinoma) cells mimicking the interaction between monocytes/macrophages and cancer cells that recapitulated the enhanced TGF-β production in Siglec-15 expressing THP-1 cells by the cellular interaction with sTn expressing H157 cells. |
| T6 | 0-328 | Sentence | denotes | We designed a co-culture model of THP-1 (human monocytic leukemia) cells and H157 (human lung carcinoma) cells mimicking the interaction between monocytes/macrophages and cancer cells that recapitulated the enhanced TGF-β production in Siglec-15 expressing THP-1 cells by the cellular interaction with sTn expressing H157 cells. |
| T6 | 0-328 | Sentence | denotes | We designed a co-culture model of THP-1 (human monocytic leukemia) cells and H157 (human lung carcinoma) cells mimicking the interaction between monocytes/macrophages and cancer cells that recapitulated the enhanced TGF-β production in Siglec-15 expressing THP-1 cells by the cellular interaction with sTn expressing H157 cells. |
GlyCosmos15-Sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T6 | 0-328 | Sentence | denotes | We designed a co-culture model of THP-1 (human monocytic leukemia) cells and H157 (human lung carcinoma) cells mimicking the interaction between monocytes/macrophages and cancer cells that recapitulated the enhanced TGF-β production in Siglec-15 expressing THP-1 cells by the cellular interaction with sTn expressing H157 cells. |
NCBITAXON
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T2 | 41-46 | OrganismTaxon | denotes | human | 9606 |
| T3 | 83-88 | OrganismTaxon | denotes | human | 9606 |
Anatomy-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T11 | 89-93 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
| T12 | 145-154 | Body_part | denotes | monocytes | http://purl.obolibrary.org/obo/CL_0000576|http://purl.obolibrary.org/obo/CL_0001054 |
| T14 | 155-166 | Body_part | denotes | macrophages | http://purl.obolibrary.org/obo/CL_0000235 |
HP-phenotype
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T6 | 57-65 | Phenotype | denotes | leukemia | HP:0001909 |
| T7 | 94-103 | Phenotype | denotes | carcinoma | HP:0030731 |
| T8 | 171-177 | Phenotype | denotes | cancer | HP:0002664 |