PubMed:22711886 / 133-445
Annnotations
LitCoin-entities-OrganismTaxon-PD
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T3 | 46-50 | OrganismTaxon | denotes | mice | NCBItxid:10095|NCBItxid:10088 |
LitCoin-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T2 | 0-312 | Sentence | denotes | We have previously shown that transgenic (tg) mice expressing in B lymphocytes both BCL-2 and a TNFR-associated factor 2 (TRAF2) mutant lacking the really interesting new gene and zinc finger domains (TRAF2DN) develop small lymphocytic lymphoma and chronic lymphocytic leukemia with high incidence (Zapata et al. |
LitCoin-entities
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| 8979 | 46-50 | OrganismTaxon | denotes | mice | NCBITaxon:10090 |
| 8980 | 84-89 | GeneOrGeneProduct | denotes | BCL-2 | NCBIGene:596 |
| 8981 | 96-120 | GeneOrGeneProduct | denotes | TNFR-associated factor 2 | NCBIGene:22030 |
| 8982 | 122-127 | GeneOrGeneProduct | denotes | TRAF2 | NCBIGene:22030 |
| 8983 | 218-244 | DiseaseOrPhenotypicFeature | denotes | small lymphocytic lymphoma | MESH:D015451 |
| 8984 | 249-277 | DiseaseOrPhenotypicFeature | denotes | chronic lymphocytic leukemia | MESH:D015451 |
LitCoin_Mondo
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T4 | 236-244 | DiseaseOrPhenotypicFeature | denotes | lymphoma | 0005062 |
| T5 | 269-277 | DiseaseOrPhenotypicFeature | denotes | leukemia | 0005059 |
LitCoin-GeneOrGeneProduct-v0
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T8 | 46-50 | GeneOrGeneProduct | denotes | mice |
| T9 | 67-78 | GeneOrGeneProduct | denotes | lymphocytes |
| T10 | 84-89 | GeneOrGeneProduct | denotes | BCL-2 |
| T11 | 96-100 | GeneOrGeneProduct | denotes | TNFR |
| T12 | 112-120 | GeneOrGeneProduct | denotes | factor 2 |
| T13 | 122-127 | GeneOrGeneProduct | denotes | TRAF2 |
| T14 | 129-135 | GeneOrGeneProduct | denotes | mutant |
| T15 | 136-143 | GeneOrGeneProduct | denotes | lacking |
| T16 | 180-191 | GeneOrGeneProduct | denotes | zinc finger |
| T17 | 218-223 | GeneOrGeneProduct | denotes | small |
| T18 | 224-235 | GeneOrGeneProduct | denotes | lymphocytic |
| T19 | 257-268 | GeneOrGeneProduct | denotes | lymphocytic |
| T20 | 283-287 | GeneOrGeneProduct | denotes | high |
LitCoin-GeneOrGeneProduct-v2
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T5 | 67-78 | GeneOrGeneProduct | denotes | lymphocytes |
| T6 | 84-89 | GeneOrGeneProduct | denotes | BCL-2 |
| T7 | 96-100 | GeneOrGeneProduct | denotes | TNFR |
| T8 | 112-120 | GeneOrGeneProduct | denotes | factor 2 |
| T9 | 122-127 | GeneOrGeneProduct | denotes | TRAF2 |
| T10 | 129-135 | GeneOrGeneProduct | denotes | mutant |
| T11 | 180-191 | GeneOrGeneProduct | denotes | zinc finger |
| T12 | 218-223 | GeneOrGeneProduct | denotes | small |
| T13 | 283-287 | GeneOrGeneProduct | denotes | high |
LitCoin-Disease-MeSH
| Id | Subject | Object | Predicate | Lexical cue | originalLabel |
|---|---|---|---|---|---|
| T3 | 218-244 | DiseaseOrPhenotypicFeature | denotes | small lymphocytic lymphoma | D015451 |
| T4 | 249-277 | DiseaseOrPhenotypicFeature | denotes | chronic lymphocytic leukemia | D015451 |
LitCoin-GeneOrGeneProduct-v3
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T2 | 51-78 | GeneOrGeneProduct | denotes | expressing in B lymphocytes |
| T3 | 84-89 | GeneOrGeneProduct | denotes | BCL-2 |
| T4 | 96-100 | GeneOrGeneProduct | denotes | TNFR |
| T5 | 122-127 | GeneOrGeneProduct | denotes | TRAF2 |
| T6 | 180-191 | GeneOrGeneProduct | denotes | zinc finger |
LitCoin_Mondo_095
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T3 | 218-244 | DiseaseOrPhenotypicFeature | denotes | small lymphocytic lymphoma | 0004948 |
| T4 | 249-277 | DiseaseOrPhenotypicFeature | denotes | chronic lymphocytic leukemia | 0004948 |
LitCoin-MeSH-Disease-2
| Id | Subject | Object | Predicate | Lexical cue | ID: |
|---|---|---|---|---|---|
| T3 | 218-244 | DiseaseOrPhenotypicFeature | denotes | small lymphocytic lymphoma | D015451 |
| T4 | 249-277 | DiseaseOrPhenotypicFeature | denotes | chronic lymphocytic leukemia | D015451 |
LitCoin-MONDO_bioort2019
| Id | Subject | Object | Predicate | Lexical cue | #label |
|---|---|---|---|---|---|
| T3 | 218-244 | DiseaseOrPhenotypicFeature | denotes | small lymphocytic lymphoma | D015451 |
| T4 | 249-277 | DiseaseOrPhenotypicFeature | denotes | chronic lymphocytic leukemia | D015451 |
LitCoin-NCBITaxon-2
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T2 | 46-50 | OrganismTaxon | denotes | mice |
LitCoin-Chemical-MeSH-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | ID: |
|---|---|---|---|---|---|
| T1 | 180-184 | ChemicalEntity | denotes | zinc | D015032|http://purl.obolibrary.org/obo/CHEBI_30185|http://purl.obolibrary.org/obo/CHEBI_27363 |
LitCoin-training-merged
| Id | Subject | Object | Predicate | Lexical cue | #label | ID: |
|---|---|---|---|---|---|---|
| T13843 | 180-184 | ChemicalEntity | denotes | zinc | http://purl.obolibrary.org/obo/CHEBI_27363|http://purl.obolibrary.org/obo/CHEBI_30185|D015032 | |
| T6 | 180-191 | GeneOrGeneProduct | denotes | zinc finger | ||
| T5 | 122-127 | GeneOrGeneProduct | denotes | TRAF2 | ||
| T98072 | 96-100 | GeneOrGeneProduct | denotes | TNFR | ||
| T3 | 84-89 | GeneOrGeneProduct | denotes | BCL-2 | ||
| T88651 | 51-78 | GeneOrGeneProduct | denotes | expressing in B lymphocytes | ||
| T73476 | 249-277 | DiseaseOrPhenotypicFeature | denotes | chronic lymphocytic leukemia | D015451 | |
| T16993 | 218-244 | DiseaseOrPhenotypicFeature | denotes | small lymphocytic lymphoma | D015451 | |
| T51070 | 46-50 | OrganismTaxon | denotes | mice |
PubmedHPO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 236-244 | HP_0002665 | denotes | lymphoma |
| T2 | 249-277 | HP_0005550 | denotes | chronic lymphocytic leukemia |
| T3 | 269-277 | HP_0001909 | denotes | leukemia |
Allie
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| SS1_22711886_1_0 | 30-40 | expanded | denotes | transgenic |
| SS2_22711886_1_0 | 42-44 | abbr | denotes | tg |
| SS1_22711886_1_1 | 96-120 | expanded | denotes | TNFR-associated factor 2 |
| SS2_22711886_1_1 | 122-127 | abbr | denotes | TRAF2 |
| AE1_22711886_1_0 | SS1_22711886_1_0 | SS2_22711886_1_0 | abbreviatedTo | transgenic,tg |
| AE1_22711886_1_1 | SS1_22711886_1_1 | SS2_22711886_1_1 | abbreviatedTo | TNFR-associated factor 2,TRAF2 |
DisGeNET5_gene_disease
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 22711886-1#84#89#gene596 | 84-89 | gene596 | denotes | BCL-2 |
| 22711886-1#122#127#gene7186 | 122-127 | gene7186 | denotes | TRAF2 |
| 22711886-1#84#89#gene596 | 84-89 | gene596 | denotes | BCL-2 |
| 22711886-1#122#127#gene7186 | 122-127 | gene7186 | denotes | TRAF2 |
| 22711886-1#218#244#diseaseC0023434 | 218-244 | diseaseC0023434 | denotes | small lymphocytic lymphoma |
| 22711886-1#218#244#diseaseC0855095 | 218-244 | diseaseC0855095 | denotes | small lymphocytic lymphoma |
| 22711886-1#218#244#diseaseC0023434 | 218-244 | diseaseC0023434 | denotes | small lymphocytic lymphoma |
| 22711886-1#218#244#diseaseC0855095 | 218-244 | diseaseC0855095 | denotes | small lymphocytic lymphoma |
| 22711886-1#249#277#diseaseC0023434 | 249-277 | diseaseC0023434 | denotes | chronic lymphocytic leukemia |
| 84#89#gene596218#244#diseaseC0023434 | 22711886-1#84#89#gene596 | 22711886-1#218#244#diseaseC0023434 | associated_with | BCL-2,small lymphocytic lymphoma |
| 84#89#gene596218#244#diseaseC0855095 | 22711886-1#84#89#gene596 | 22711886-1#218#244#diseaseC0855095 | associated_with | BCL-2,small lymphocytic lymphoma |
| 84#89#gene596218#244#diseaseC0023434 | 22711886-1#84#89#gene596 | 22711886-1#218#244#diseaseC0023434 | associated_with | BCL-2,small lymphocytic lymphoma |
| 84#89#gene596218#244#diseaseC0855095 | 22711886-1#84#89#gene596 | 22711886-1#218#244#diseaseC0855095 | associated_with | BCL-2,small lymphocytic lymphoma |
| 84#89#gene596249#277#diseaseC0023434 | 22711886-1#84#89#gene596 | 22711886-1#249#277#diseaseC0023434 | associated_with | BCL-2,chronic lymphocytic leukemia |
| 122#127#gene7186218#244#diseaseC0023434 | 22711886-1#122#127#gene7186 | 22711886-1#218#244#diseaseC0023434 | associated_with | TRAF2,small lymphocytic lymphoma |
| 122#127#gene7186218#244#diseaseC0855095 | 22711886-1#122#127#gene7186 | 22711886-1#218#244#diseaseC0855095 | associated_with | TRAF2,small lymphocytic lymphoma |
| 122#127#gene7186218#244#diseaseC0023434 | 22711886-1#122#127#gene7186 | 22711886-1#218#244#diseaseC0023434 | associated_with | TRAF2,small lymphocytic lymphoma |
| 122#127#gene7186218#244#diseaseC0855095 | 22711886-1#122#127#gene7186 | 22711886-1#218#244#diseaseC0855095 | associated_with | TRAF2,small lymphocytic lymphoma |
| 122#127#gene7186249#277#diseaseC0023434 | 22711886-1#122#127#gene7186 | 22711886-1#249#277#diseaseC0023434 | associated_with | TRAF2,chronic lymphocytic leukemia |
| 84#89#gene596218#244#diseaseC0023434 | 22711886-1#84#89#gene596 | 22711886-1#218#244#diseaseC0023434 | associated_with | BCL-2,small lymphocytic lymphoma |
| 84#89#gene596218#244#diseaseC0855095 | 22711886-1#84#89#gene596 | 22711886-1#218#244#diseaseC0855095 | associated_with | BCL-2,small lymphocytic lymphoma |
| 84#89#gene596218#244#diseaseC0023434 | 22711886-1#84#89#gene596 | 22711886-1#218#244#diseaseC0023434 | associated_with | BCL-2,small lymphocytic lymphoma |
| 84#89#gene596218#244#diseaseC0855095 | 22711886-1#84#89#gene596 | 22711886-1#218#244#diseaseC0855095 | associated_with | BCL-2,small lymphocytic lymphoma |
| 84#89#gene596249#277#diseaseC0023434 | 22711886-1#84#89#gene596 | 22711886-1#249#277#diseaseC0023434 | associated_with | BCL-2,chronic lymphocytic leukemia |
| 122#127#gene7186218#244#diseaseC0023434 | 22711886-1#122#127#gene7186 | 22711886-1#218#244#diseaseC0023434 | associated_with | TRAF2,small lymphocytic lymphoma |
| 122#127#gene7186218#244#diseaseC0855095 | 22711886-1#122#127#gene7186 | 22711886-1#218#244#diseaseC0855095 | associated_with | TRAF2,small lymphocytic lymphoma |
| 122#127#gene7186218#244#diseaseC0023434 | 22711886-1#122#127#gene7186 | 22711886-1#218#244#diseaseC0023434 | associated_with | TRAF2,small lymphocytic lymphoma |
| 122#127#gene7186218#244#diseaseC0855095 | 22711886-1#122#127#gene7186 | 22711886-1#218#244#diseaseC0855095 | associated_with | TRAF2,small lymphocytic lymphoma |
| 122#127#gene7186249#277#diseaseC0023434 | 22711886-1#122#127#gene7186 | 22711886-1#249#277#diseaseC0023434 | associated_with | TRAF2,chronic lymphocytic leukemia |