PubMed:22527884 JSONTXT

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{"target":"https://pubannotation.org/docs/sourcedb/PubMed/sourceid/22527884","sourcedb":"PubMed","sourceid":"22527884","source_url":"http://www.ncbi.nlm.nih.gov/pubmed/22527884","text":"Genetic variation in the carbonyl reductase 3 gene confers risk of type 2 diabetes and insulin resistance: a potential regulator of adipogenesis.\nProstaglandins are potent modulators of insulin sensitivity. We systemically evaluated the association of 61 tag single-nucleotide polymorphisms (SNP) in 14 genes involved in prostaglandin metabolism with type 2 diabetes. Among all genotyped SNPs, rs10483032 in the CBR3 (carbonyl reductase 3) gene, which encodes for an enzyme converting prostaglandin E(2) to prostaglandin F2(α), was associated with type 2 diabetes in 760 type 2 diabetic cases and 760 controls (stage-1 study) (P = 2.0 × 10(-4)). The association was validated in 1,615 cases and 1,162 controls (stage-2 study) (P = 0.009). The A allele at rs10483032 was associated with increased risk of type 2 diabetes (odds ratio = 1.29; 95% confidence interval = 1.14-1.47; combined P \u003c 0.0001). The association was externally validated in the Finland-United States Investigation of NIDDM Genetics (FUSION) study (P = 3.7 × 10(-4)). The risk A allele was associated with higher homeostasis model assessment of insulin resistance (HOMA-IR) in 1,012 non-diabetic controls and 1,138 non-diabetic subjects from the Stanford Asia-Pacific Program for Hypertension and Insulin Resistance (SAPPHIRe) family study. CBR3 gene expression in human abdominal adipose tissue was negatively associated with fasting insulin and HOMA-IR. CBR3 gene expression increased during differentiation of 3T3-L1 preadipocytes into adipocytes. Knockdown of CBR3 in 3T3-L1 preadipocytes enhanced adipogenesis and peroxisome proliferator-activator receptor-γ response element reporter activity. Our results indicated that genetic polymorphism in the CBR3 gene conferred risk of type 2 diabetes and insulin resistance in Chinese. The association was probably mediated through modulation of adipogenesis.","tracks":[{"project":"Allie","denotations":[{"id":"SS1_22527884_2_0","span":{"begin":259,"end":290},"obj":"expanded"},{"id":"SS2_22527884_2_0","span":{"begin":292,"end":295},"obj":"abbr"},{"id":"SS1_22527884_3_0","span":{"begin":418,"end":438},"obj":"expanded"},{"id":"SS2_22527884_3_0","span":{"begin":412,"end":416},"obj":"abbr"},{"id":"SS1_22527884_6_0","span":{"begin":947,"end":1000},"obj":"expanded"},{"id":"SS2_22527884_6_0","span":{"begin":1002,"end":1008},"obj":"abbr"},{"id":"SS1_22527884_7_0","span":{"begin":1081,"end":1131},"obj":"expanded"},{"id":"SS2_22527884_7_0","span":{"begin":1133,"end":1140},"obj":"abbr"},{"id":"SS1_22527884_7_1","span":{"begin":1214,"end":1283},"obj":"expanded"},{"id":"SS2_22527884_7_1","span":{"begin":1285,"end":1293},"obj":"abbr"}],"relations":[{"id":"AE1_22527884_2_0","pred":"abbreviatedTo","subj":"SS1_22527884_2_0","obj":"SS2_22527884_2_0"},{"id":"AE1_22527884_3_0","pred":"abbreviatedTo","subj":"SS1_22527884_3_0","obj":"SS2_22527884_3_0"},{"id":"AE1_22527884_6_0","pred":"abbreviatedTo","subj":"SS1_22527884_6_0","obj":"SS2_22527884_6_0"},{"id":"AE1_22527884_7_0","pred":"abbreviatedTo","subj":"SS1_22527884_7_0","obj":"SS2_22527884_7_0"},{"id":"AE1_22527884_7_1","pred":"abbreviatedTo","subj":"SS1_22527884_7_1","obj":"SS2_22527884_7_1"}],"attributes":[{"subj":"SS1_22527884_2_0","pred":"source","obj":"Allie"},{"subj":"SS2_22527884_2_0","pred":"source","obj":"Allie"},{"subj":"SS1_22527884_3_0","pred":"source","obj":"Allie"},{"subj":"SS2_22527884_3_0","pred":"source","obj":"Allie"},{"subj":"SS1_22527884_6_0","pred":"source","obj":"Allie"},{"subj":"SS2_22527884_6_0","pred":"source","obj":"Allie"},{"subj":"SS1_22527884_7_0","pred":"source","obj":"Allie"},{"subj":"SS2_22527884_7_0","pred":"source","obj":"Allie"},{"subj":"SS1_22527884_7_1","pred":"source","obj":"Allie"},{"subj":"SS2_22527884_7_1","pred":"source","obj":"Allie"}]},{"project":"PubmedHPO","denotations":[{"id":"T1","span":{"begin":309,"end":345},"obj":"HP_0011023"},{"id":"T2","span":{"begin":1113,"end":1131},"obj":"HP_0000855"},{"id":"T3","span":{"begin":1248,"end":1260},"obj":"HP_0000822"},{"id":"T4","span":{"begin":1265,"end":1283},"obj":"HP_0000855"},{"id":"T5","span":{"begin":1771,"end":1789},"obj":"HP_0000855"}],"attributes":[{"subj":"T1","pred":"source","obj":"PubmedHPO"},{"subj":"T2","pred":"source","obj":"PubmedHPO"},{"subj":"T3","pred":"source","obj":"PubmedHPO"},{"subj":"T4","pred":"source","obj":"PubmedHPO"},{"subj":"T5","pred":"source","obj":"PubmedHPO"}]},{"project":"DisGeNET","denotations":[{"id":"T0","span":{"begin":1723,"end":1727},"obj":"gene:874"},{"id":"T1","span":{"begin":1751,"end":1766},"obj":"disease:C0011860"},{"id":"T2","span":{"begin":1771,"end":1778},"obj":"gene:723961"},{"id":"T3","span":{"begin":1751,"end":1766},"obj":"disease:C0011860"},{"id":"T4","span":{"begin":1771,"end":1778},"obj":"gene:3630"},{"id":"T5","span":{"begin":1751,"end":1766},"obj":"disease:C0011860"}],"relations":[{"id":"R1","pred":"associated_with","subj":"T0","obj":"T1"},{"id":"R2","pred":"associated_with","subj":"T2","obj":"T3"},{"id":"R3","pred":"associated_with","subj":"T4","obj":"T5"}],"namespaces":[{"prefix":"gene","uri":"http://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"disease","uri":"http://purl.bioontology.org/ontology/MEDLINEPLUS/"}],"attributes":[{"subj":"T0","pred":"source","obj":"DisGeNET"},{"subj":"T1","pred":"source","obj":"DisGeNET"},{"subj":"T2","pred":"source","obj":"DisGeNET"},{"subj":"T3","pred":"source","obj":"DisGeNET"},{"subj":"T4","pred":"source","obj":"DisGeNET"},{"subj":"T5","pred":"source","obj":"DisGeNET"}]},{"project":"DisGeNET5_variant_disease","denotations":[{"id":"22527884-5#16#26#geners10483032","span":{"begin":755,"end":765},"obj":"geners10483032"},{"id":"22527884-5#65#80#diseaseC0011860","span":{"begin":804,"end":819},"obj":"diseaseC0011860"}],"relations":[{"id":"16#26#geners1048303265#80#diseaseC0011860","pred":"associated_with","subj":"22527884-5#16#26#geners10483032","obj":"22527884-5#65#80#diseaseC0011860"}],"attributes":[{"subj":"22527884-5#16#26#geners10483032","pred":"source","obj":"DisGeNET5_variant_disease"},{"subj":"22527884-5#65#80#diseaseC0011860","pred":"source","obj":"DisGeNET5_variant_disease"}]},{"project":"DisGeNET5_gene_disease","denotations":[{"id":"22527884-0#25#45#gene874","span":{"begin":25,"end":45},"obj":"gene874"},{"id":"22527884-0#67#82#diseaseC0011860","span":{"begin":67,"end":82},"obj":"diseaseC0011860"}],"relations":[{"id":"25#45#gene87467#82#diseaseC0011860","pred":"associated_with","subj":"22527884-0#25#45#gene874","obj":"22527884-0#67#82#diseaseC0011860"}],"attributes":[{"subj":"22527884-0#25#45#gene874","pred":"source","obj":"DisGeNET5_gene_disease"},{"subj":"22527884-0#67#82#diseaseC0011860","pred":"source","obj":"DisGeNET5_gene_disease"}]},{"project":"PubTator4TogoVar","denotations":[{"id":"38","span":{"begin":394,"end":404},"obj":"SNP"},{"id":"45","span":{"begin":755,"end":765},"obj":"SNP"}],"attributes":[{"id":"A38","pred":"resolved_to","su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