PubMed:22345628 / 814-1093 JSONTXT

{"project":"CL-cell","denotations":[{"id":"T7","span":{"begin":130,"end":140},"obj":"Cell"},{"id":"T8","span":{"begin":268,"end":278},"obj":"Cell"}],"attributes":[{"id":"A7","pred":"cl_id","subj":"T7","obj":"http://purl.obolibrary.org/obo/CL:0000234"},{"id":"A8","pred":"cl_id","subj":"T8","obj":"http://purl.obolibrary.org/obo/CL:0000234"}],"text":"In the present study, we observed that O-GlcNAc proteins from apoptotic cells interacted with the surface vimentin of neighboring phagocytes and that this interaction induced serine 71-phosphorylation and recruitment of vimentin to the cell surface of the neighboring phagocytes."}

{"project":"Glycan-Motif","denotations":[{"id":"T4","span":{"begin":39,"end":47},"obj":"https://glytoucan.org/Structures/Glycans/G49108TO"},{"id":"T5","span":{"begin":39,"end":47},"obj":"https://glytoucan.org/Structures/Glycans/G89565QL"}],"text":"In the present study, we observed that O-GlcNAc proteins from apoptotic cells interacted with the surface vimentin of neighboring phagocytes and that this interaction induced serine 71-phosphorylation and recruitment of vimentin to the cell surface of the neighboring phagocytes."}

{"project":"GlyCosmos6-Glycan-Motif-Image","denotations":[{"id":"T4","span":{"begin":39,"end":47},"obj":"Glycan_Motif"}],"attributes":[{"id":"A4","pred":"image","subj":"T4","obj":"https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G89565QL"},{"id":"A5","pred":"image","subj":"T4","obj":"https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G49108TO"}],"text":"In the present study, we observed that O-GlcNAc proteins from apoptotic cells interacted with the surface vimentin of neighboring phagocytes and that this interaction induced serine 71-phosphorylation and recruitment of vimentin to the cell surface of the neighboring phagocytes."}

{"project":"Glycosmos6-GlycoEpitope","denotations":[{"id":"T2","span":{"begin":39,"end":47},"obj":"http://www.glycoepitope.jp/epitopes/EP0004"}],"text":"In the present study, we observed that O-GlcNAc proteins from apoptotic cells interacted with the surface vimentin of neighboring phagocytes and that this interaction induced serine 71-phosphorylation and recruitment of vimentin to the cell surface of the neighboring phagocytes."}

{"project":"GlyCosmos6-Glycan-Motif-Structure","denotations":[{"id":"T4","span":{"begin":39,"end":47},"obj":"https://glytoucan.org/Structures/Glycans/G49108TO"},{"id":"T5","span":{"begin":39,"end":47},"obj":"https://glytoucan.org/Structures/Glycans/G89565QL"}],"text":"In the present study, we observed that O-GlcNAc proteins from apoptotic cells interacted with the surface vimentin of neighboring phagocytes and that this interaction induced serine 71-phosphorylation and recruitment of vimentin to the cell surface of the neighboring phagocytes."}

{"project":"GlycoBiology-FMA","denotations":[{"id":"_T49","span":{"begin":48,"end":56},"obj":"FMAID:67257"},{"id":"_T50","span":{"begin":48,"end":56},"obj":"FMAID:165447"},{"id":"_T51","span":{"begin":72,"end":77},"obj":"FMAID:68646"},{"id":"_T52","span":{"begin":72,"end":77},"obj":"FMAID:169002"},{"id":"_T53","span":{"begin":98,"end":105},"obj":"FMAID:146300"},{"id":"_T54","span":{"begin":98,"end":105},"obj":"FMAID:50594"},{"id":"_T55","span":{"begin":106,"end":114},"obj":"FMAID:165466"},{"id":"_T56","span":{"begin":106,"end":114},"obj":"FMAID:67330"},{"id":"_T57","span":{"begin":130,"end":140},"obj":"FMAID:83806"},{"id":"_T58","span":{"begin":130,"end":140},"obj":"FMAID:197279"},{"id":"_T59","span":{"begin":175,"end":181},"obj":"FMAID:82764"},{"id":"_T60","span":{"begin":175,"end":181},"obj":"FMAID:165609"},{"id":"_T61","span":{"begin":175,"end":181},"obj":"FMAID:196753"},{"id":"_T62","span":{"begin":175,"end":181},"obj":"FMAID:67710"},{"id":"_T63","span":{"begin":220,"end":228},"obj":"FMAID:67330"},{"id":"_T64","span":{"begin":220,"end":228},"obj":"FMAID:165466"},{"id":"_T65","span":{"begin":241,"end":248},"obj":"FMAID:50594"},{"id":"_T66","span":{"begin":241,"end":248},"obj":"FMAID:146300"},{"id":"_T67","span":{"begin":241,"end":255},"obj":"FMAID:25241"},{"id":"_T68","span":{"begin":241,"end":255},"obj":"FMAID:167552"},{"id":"_T69","span":{"begin":241,"end":255},"obj":"FMAID:117867"},{"id":"_T70","span":{"begin":241,"end":255},"obj":"FMAID:117967"},{"id":"_T71","span":{"begin":241,"end":255},"obj":"FMAID:25320"},{"id":"_T72","span":{"begin":241,"end":255},"obj":"FMAID:25456"},{"id":"_T73","span":{"begin":241,"end":255},"obj":"FMAID:63163"},{"id":"_T74","span":{"begin":241,"end":255},"obj":"FMAID:118168"},{"id":"_T75","span":{"begin":268,"end":278},"obj":"FMAID:197279"},{"id":"_T76","span":{"begin":268,"end":278},"obj":"FMAID:83806"}],"namespaces":[{"prefix":"FMAID","uri":"http://purl.org/sig/ont/fma/fma"}],"text":"In the present study, we observed that O-GlcNAc proteins from apoptotic cells interacted with the surface vimentin of neighboring phagocytes and that this interaction induced serine 71-phosphorylation and recruitment of vimentin to the cell surface of the neighboring phagocytes."}

{"project":"uniprot-human","denotations":[{"id":"T5","span":{"begin":106,"end":114},"obj":"http://www.uniprot.org/uniprot/Q8N850"},{"id":"T6","span":{"begin":220,"end":228},"obj":"http://www.uniprot.org/uniprot/Q8N850"}],"text":"In the present study, we observed that O-GlcNAc proteins from apoptotic cells interacted with the surface vimentin of neighboring phagocytes and that this interaction induced serine 71-phosphorylation and recruitment of vimentin to the cell surface of the neighboring phagocytes."}

{"project":"uniprot-mouse","denotations":[{"id":"T5","span":{"begin":106,"end":114},"obj":"http://www.uniprot.org/uniprot/P20152"},{"id":"T6","span":{"begin":220,"end":228},"obj":"http://www.uniprot.org/uniprot/P20152"}],"text":"In the present study, we observed that O-GlcNAc proteins from apoptotic cells interacted with the surface vimentin of neighboring phagocytes and that this interaction induced serine 71-phosphorylation and recruitment of vimentin to the cell surface of the neighboring phagocytes."}

{"project":"GlycoBiology-NCBITAXON","denotations":[{"id":"T8","span":{"begin":72,"end":77},"obj":"http://purl.bioontology.org/ontology/STY/T025"}],"text":"In the present study, we observed that O-GlcNAc proteins from apoptotic cells interacted with the surface vimentin of neighboring phagocytes and that this interaction induced serine 71-phosphorylation and recruitment of vimentin to the cell surface of the neighboring phagocytes."}

{"project":"GO-BP","denotations":[{"id":"T18","span":{"begin":185,"end":200},"obj":"http://purl.obolibrary.org/obo/GO_0016310"}],"text":"In the present study, we observed that O-GlcNAc proteins from apoptotic cells interacted with the surface vimentin of neighboring phagocytes and that this interaction induced serine 71-phosphorylation and recruitment of vimentin to the cell surface of the neighboring phagocytes."}

{"project":"GO-CC","denotations":[{"id":"T6","span":{"begin":72,"end":77},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T10","span":{"begin":236,"end":240},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T17","span":{"begin":106,"end":114},"obj":"http://purl.obolibrary.org/obo/GO_0045098"},{"id":"T18","span":{"begin":220,"end":228},"obj":"http://purl.obolibrary.org/obo/GO_0045098"},{"id":"T24","span":{"begin":236,"end":248},"obj":"http://purl.obolibrary.org/obo/GO_0009986"}],"text":"In the present study, we observed that O-GlcNAc proteins from apoptotic cells interacted with the surface vimentin of neighboring phagocytes and that this interaction induced serine 71-phosphorylation and recruitment of vimentin to the cell surface of the neighboring phagocytes."}

{"project":"NGLY1-deficiency","denotations":[{"id":"PD-NGLY1-deficiency-B_T6","span":{"begin":41,"end":47},"obj":"chem:24139"}],"namespaces":[{"prefix":"hgnc","uri":"https://www.genenames.org/data/gene-symbol-report/#!/hgnc_id/HGNC:"},{"prefix":"omim","uri":"https://www.omim.org/entry/"},{"prefix":"chem","uri":"https://pubchem.ncbi.nlm.nih.gov/compound/"}],"text":"In the present study, we observed that O-GlcNAc proteins from apoptotic cells interacted with the surface vimentin of neighboring phagocytes and that this interaction induced serine 71-phosphorylation and recruitment of vimentin to the cell surface of the neighboring phagocytes."}

{"project":"GlyTouCan-IUPAC","denotations":[{"id":"GlycanIUPAC_T5","span":{"begin":41,"end":47},"obj":"\"http://rdf.glycoinfo.org/glycan/G26693XF\""},{"id":"GlycanIUPAC_T13","span":{"begin":41,"end":47},"obj":"\"http://rdf.glycoinfo.org/glycan/G01864SU\""},{"id":"GlycanIUPAC_T21","span":{"begin":41,"end":47},"obj":"\"http://rdf.glycoinfo.org/glycan/G17605FD\""},{"id":"GlycanIUPAC_T29","span":{"begin":41,"end":47},"obj":"\"http://rdf.glycoinfo.org/glycan/G41950LU\""},{"id":"GlycanIUPAC_T37","span":{"begin":41,"end":47},"obj":"\"http://rdf.glycoinfo.org/glycan/G57195RJ\""},{"id":"GlycanIUPAC_T45","span":{"begin":41,"end":47},"obj":"\"http://rdf.glycoinfo.org/glycan/G85391SA\""},{"id":"GlycanIUPAC_T53","span":{"begin":41,"end":47},"obj":"\"http://rdf.glycoinfo.org/glycan/G89565QL\""},{"id":"GlycanIUPAC_T61","span":{"begin":41,"end":47},"obj":"\"http://rdf.glycoinfo.org/glycan/G80869MR\""},{"id":"GlycanIUPAC_T69","span":{"begin":41,"end":47},"obj":"\"http://rdf.glycoinfo.org/glycan/G55978NL\""},{"id":"GlycanIUPAC_T77","span":{"begin":41,"end":47},"obj":"\"http://rdf.glycoinfo.org/glycan/G54644LT\""},{"id":"GlycanIUPAC_T85","span":{"begin":41,"end":47},"obj":"\"http://rdf.glycoinfo.org/glycan/G25694UG\""},{"id":"GlycanIUPAC_T93","span":{"begin":41,"end":47},"obj":"\"http://rdf.glycoinfo.org/glycan/G25126RB\""},{"id":"GlycanIUPAC_T101","span":{"begin":41,"end":47},"obj":"\"http://rdf.glycoinfo.org/glycan/G51848AD\""},{"id":"GlycanIUPAC_T109","span":{"begin":41,"end":47},"obj":"\"http://rdf.glycoinfo.org/glycan/G94667GM\""},{"id":"GlycanIUPAC_T117","span":{"begin":41,"end":47},"obj":"\"http://rdf.glycoinfo.org/glycan/G30124BO\""},{"id":"GlycanIUPAC_T125","span":{"begin":41,"end":47},"obj":"\"http://rdf.glycoinfo.org/glycan/G82777EZ\""},{"id":"GlycanIUPAC_T133","span":{"begin":41,"end":47},"obj":"\"http://rdf.glycoinfo.org/glycan/G10151YZ\""},{"id":"GlycanIUPAC_T141","span":{"begin":41,"end":47},"obj":"\"http://rdf.glycoinfo.org/glycan/G17585ZM\""},{"id":"GlycanIUPAC_T149","span":{"begin":41,"end":47},"obj":"\"http://rdf.glycoinfo.org/glycan/G04411CJ\""},{"id":"GlycanIUPAC_T157","span":{"begin":41,"end":47},"obj":"\"http://rdf.glycoinfo.org/glycan/G38254HJ\""},{"id":"GlycanIUPAC_T165","span":{"begin":41,"end":47},"obj":"\"http://rdf.glycoinfo.org/glycan/G75188FS\""},{"id":"GlycanIUPAC_T173","span":{"begin":41,"end":47},"obj":"\"http://rdf.glycoinfo.org/glycan/G70374VG\""},{"id":"GlycanIUPAC_T181","span":{"begin":41,"end":47},"obj":"\"http://rdf.glycoinfo.org/glycan/G45176LJ\""},{"id":"GlycanIUPAC_T189","span":{"begin":41,"end":47},"obj":"\"http://rdf.glycoinfo.org/glycan/G30874VW\""},{"id":"GlycanIUPAC_T197","span":{"begin":41,"end":47},"obj":"\"http://rdf.glycoinfo.org/glycan/G69333MI\""},{"id":"GlycanIUPAC_T205","span":{"begin":41,"end":47},"obj":"\"http://rdf.glycoinfo.org/glycan/G10676XO\""},{"id":"GlycanIUPAC_T213","span":{"begin":41,"end":47},"obj":"\"http://rdf.glycoinfo.org/glycan/G14843DJ\""},{"id":"GlycanIUPAC_T221","span":{"begin":41,"end":47},"obj":"\"http://rdf.glycoinfo.org/glycan/G47546FR\""},{"id":"GlycanIUPAC_T229","span":{"begin":41,"end":47},"obj":"\"http://rdf.glycoinfo.org/glycan/G73695ZM\""},{"id":"GlycanIUPAC_T237","span":{"begin":41,"end":47},"obj":"\"http://rdf.glycoinfo.org/glycan/G31923TJ\""},{"id":"GlycanIUPAC_T245","span":{"begin":41,"end":47},"obj":"\"http://rdf.glycoinfo.org/glycan/G60519EP\""},{"id":"GlycanIUPAC_T253","span":{"begin":41,"end":47},"obj":"\"http://rdf.glycoinfo.org/glycan/G07933IA\""},{"id":"GlycanIUPAC_T261","span":{"begin":41,"end":47},"obj":"\"http://rdf.glycoinfo.org/glycan/G40745NH\""},{"id":"GlycanIUPAC_T269","span":{"begin":41,"end":47},"obj":"\"http://rdf.glycoinfo.org/glycan/G54496YV\""},{"id":"GlycanIUPAC_T277","span":{"begin":41,"end":47},"obj":"\"http://rdf.glycoinfo.org/glycan/G62953SQ\""},{"id":"GlycanIUPAC_T285","span":{"begin":41,"end":47},"obj":"\"http://rdf.glycoinfo.org/glycan/G70070AY\""},{"id":"GlycanIUPAC_T293","span":{"begin":41,"end":47},"obj":"\"http://rdf.glycoinfo.org/glycan/G78792WC\""},{"id":"GlycanIUPAC_T301","span":{"begin":41,"end":47},"obj":"\"http://rdf.glycoinfo.org/glycan/G25238AV\""},{"id":"GlycanIUPAC_T309","span":{"begin":41,"end":47},"obj":"\"http://rdf.glycoinfo.org/glycan/G40510DP\""},{"id":"GlycanIUPAC_T317","span":{"begin":41,"end":47},"obj":"\"http://rdf.glycoinfo.org/glycan/G61120TK\""},{"id":"GlycanIUPAC_T325","span":{"begin":41,"end":47},"obj":"\"http://rdf.glycoinfo.org/glycan/G41342KV\""},{"id":"GlycanIUPAC_T333","span":{"begin":41,"end":47},"obj":"\"http://rdf.glycoinfo.org/glycan/G90703NA\""},{"id":"GlycanIUPAC_T341","span":{"begin":41,"end":47},"obj":"\"http://rdf.glycoinfo.org/glycan/G01591HR\""},{"id":"GlycanIUPAC_T349","span":{"begin":41,"end":47},"obj":"\"http://rdf.glycoinfo.org/glycan/G56520XN\""},{"id":"GlycanIUPAC_T357","span":{"begin":41,"end":47},"obj":"\"http://rdf.glycoinfo.org/glycan/G81830JX\""}],"text":"In the present study, we observed that O-GlcNAc proteins from apoptotic cells interacted with the surface vimentin of neighboring phagocytes and that this interaction induced serine 71-phosphorylation and recruitment of vimentin to the cell surface of the neighboring phagocytes."}

{"project":"sentences","denotations":[{"id":"TextSentencer_T7","span":{"begin":0,"end":279},"obj":"Sentence"},{"id":"T7","span":{"begin":0,"end":279},"obj":"Sentence"},{"id":"T7","span":{"begin":0,"end":279},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"In the present study, we observed that O-GlcNAc proteins from apoptotic cells interacted with the surface vimentin of neighboring phagocytes and that this interaction induced serine 71-phosphorylation and recruitment of vimentin to the cell surface of the neighboring phagocytes."}

{"project":"GlycoBiology-Epitope","denotations":[{"id":"PD-GlycoEpitope-B_T2","span":{"begin":39,"end":47},"obj":"http://www.glycoepitope.jp/epitopes/EP0004"}],"text":"In the present study, we observed that O-GlcNAc proteins from apoptotic cells interacted with the surface vimentin of neighboring phagocytes and that this interaction induced serine 71-phosphorylation and recruitment of vimentin to the cell surface of the neighboring phagocytes."}

{"project":"Glycan-GlyCosmos","denotations":[{"id":"T2","span":{"begin":39,"end":47},"obj":"Glycan"}],"attributes":[{"id":"A2","pred":"glycosmos_id","subj":"T2","obj":"https://glycosmos.org/glycans/show/G49108TO"},{"id":"A6","pred":"image","subj":"T2","obj":"https://api.glycosmos.org/wurcs2image/latest/png/binary/G49108TO"}],"text":"In the present study, we observed that O-GlcNAc proteins from apoptotic cells interacted with the surface vimentin of neighboring phagocytes and that this interaction induced serine 71-phosphorylation and recruitment of vimentin to the cell surface of the neighboring phagocytes."}

{"project":"GlyCosmos-GlycoEpitope","denotations":[{"id":"T2","span":{"begin":39,"end":47},"obj":"http://purl.jp/bio/12/glyco/glycan#Glycan_epitope"}],"attributes":[{"id":"A2","pred":"glycoepitope_id","subj":"T2","obj":"http://www.glycoepitope.jp/epitopes/EP0004"}],"text":"In the present study, we observed that O-GlcNAc proteins from apoptotic cells interacted with the surface vimentin of neighboring phagocytes and that this interaction induced serine 71-phosphorylation and recruitment of vimentin to the cell surface of the neighboring phagocytes."}

{"project":"GlyCosmos15-CL","denotations":[{"id":"T7","span":{"begin":130,"end":140},"obj":"Cell"},{"id":"T8","span":{"begin":268,"end":278},"obj":"Cell"}],"attributes":[{"id":"A7","pred":"cl_id","subj":"T7","obj":"http://purl.obolibrary.org/obo/CL:0000234"},{"id":"A8","pred":"cl_id","subj":"T8","obj":"http://purl.obolibrary.org/obo/CL:0000234"}],"text":"In the present study, we observed that O-GlcNAc proteins from apoptotic cells interacted with the surface vimentin of neighboring phagocytes and that this interaction induced serine 71-phosphorylation and recruitment of vimentin to the cell surface of the neighboring phagocytes."}

{"project":"GlyCosmos15-UBERON","denotations":[{"id":"T7","span":{"begin":130,"end":140},"obj":"Body_part"},{"id":"T8","span":{"begin":268,"end":278},"obj":"Body_part"}],"attributes":[{"id":"A7","pred":"uberon_id","subj":"T7","obj":"http://purl.obolibrary.org/obo/CL_0000234"},{"id":"A8","pred":"uberon_id","subj":"T8","obj":"http://purl.obolibrary.org/obo/CL_0000234"}],"text":"In the present study, we observed that O-GlcNAc proteins from apoptotic cells interacted with the surface vimentin of neighboring phagocytes and that this interaction induced serine 71-phosphorylation and recruitment of vimentin to the cell surface of the neighboring phagocytes."}

{"project":"sentences","denotations":[{"id":"TextSentencer_T7","span":{"begin":0,"end":279},"obj":"Sentence"},{"id":"T7","span":{"begin":0,"end":279},"obj":"Sentence"},{"id":"T7","span":{"begin":0,"end":279},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"In the present study, we observed that O-GlcNAc proteins from apoptotic cells interacted with the surface vimentin of neighboring phagocytes and that this interaction induced serine 71-phosphorylation and recruitment of vimentin to the cell surface of the neighboring phagocytes."}

{"project":"GlyCosmos15-Sentences","blocks":[{"id":"T7","span":{"begin":0,"end":279},"obj":"Sentence"}],"text":"In the present study, we observed that O-GlcNAc proteins from apoptotic cells interacted with the surface vimentin of neighboring phagocytes and that this interaction induced serine 71-phosphorylation and recruitment of vimentin to the cell surface of the neighboring phagocytes."}

{"project":"GlyCosmos15-Glycan","denotations":[{"id":"T2","span":{"begin":39,"end":47},"obj":"Glycan"}],"attributes":[{"id":"A2","pred":"glycosmos_id","subj":"T2","obj":"https://glycosmos.org/glycans/show/G49108TO"},{"id":"A6","pred":"image","subj":"T2","obj":"https://api.glycosmos.org/wurcs2image/latest/png/binary/G49108TO"}],"text":"In the present study, we observed that O-GlcNAc proteins from apoptotic cells interacted with the surface vimentin of neighboring phagocytes and that this interaction induced serine 71-phosphorylation and recruitment of vimentin to the cell surface of the neighboring phagocytes."}

{"project":"GlyCosmos15-GlycoEpitope","denotations":[{"id":"T2","span":{"begin":39,"end":47},"obj":"http://purl.jp/bio/12/glyco/glycan#Glycan_epitope"}],"attributes":[{"id":"A2","pred":"glycoepitope_id","subj":"T2","obj":"http://www.glycoepitope.jp/epitopes/EP0004"}],"text":"In the present study, we observed that O-GlcNAc proteins from apoptotic cells interacted with the surface vimentin of neighboring phagocytes and that this interaction induced serine 71-phosphorylation and recruitment of vimentin to the cell surface of the neighboring phagocytes."}

{"project":"Lectin-Jamboree-Sentence","blocks":[{"id":"T7","span":{"begin":0,"end":279},"obj":"Sentence"}],"text":"In the present study, we observed that O-GlcNAc proteins from apoptotic cells interacted with the surface vimentin of neighboring phagocytes and that this interaction induced serine 71-phosphorylation and recruitment of vimentin to the cell surface of the neighboring phagocytes."}

{"project":"Anatomy-UBERON","denotations":[{"id":"T7","span":{"begin":130,"end":140},"obj":"Body_part"},{"id":"T8","span":{"begin":268,"end":278},"obj":"Body_part"}],"attributes":[{"id":"A7","pred":"uberon_id","subj":"T7","obj":"http://purl.obolibrary.org/obo/CL_0000234"},{"id":"A8","pred":"uberon_id","subj":"T8","obj":"http://purl.obolibrary.org/obo/CL_0000234"}],"text":"In the present study, we observed that O-GlcNAc proteins from apoptotic cells interacted with the surface vimentin of neighboring phagocytes and that this interaction induced serine 71-phosphorylation and recruitment of vimentin to the cell surface of the neighboring phagocytes."}